>YKQ8_CAEEL (P34303) Putative zinc finger protein C06E1.8|
          Length = 397

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
 Frame = -3

Query: 200 CMHACMHSSLLSAKD*FKYHMLHQLLHFTEPILQNKDIRTIL---HHIMRIVVCHSCNNV 30
           C     HSS LS      +   ++     + I  ++ +RT +   HHI R+ +C  CN  
Sbjct: 56  CSKVFCHSSSLSRHRMQAHFKSYKCTVCRKDISSSESLRTHMFKQHHISRMYMCRCCNWA 115

Query: 29  YKSPSIL 9
           +   S+L
Sbjct: 116 FPDKSLL 122

>Y302_ENCCU (Q8SW84) Hypothetical protein ECU03_0020|
          Length = 269

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
 Frame = -1

Query: 229 IRYLLRSWKHAC--MHACILPSYRQRINLSTTCYISYFILPSLFCKTRTYVRFYTTLCAL 56
           I + L  W HA    +  +LPS+   +  +     SYF++P     T T +    ++C++
Sbjct: 119 IPFSLNEWDHAASFFYPIVLPSFT--VPPAYLLSSSYFLVPRQIRLTDTVISILISVCSI 176

Query: 55  SSVIHV 38
            +V+ V
Sbjct: 177 VNVLLV 182

>Y503_ENCCU (Q8ST70) Hypothetical protein ECU05_0030/ECU10_1870|
          Length = 489

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
 Frame = -1

Query: 229 IRYLLRSWKHAC--MHACILPSYRQRINLSTTCYISYFILPSLFCKTRTYVRFYTTLCAL 56
           I + L  W HA    +  +LPS+   +  +     SYF++P     T T +    ++C++
Sbjct: 339 IPFSLNEWDHAASFFYPIVLPSFT--VPPAYLLSSSYFLVPRQIRLTDTVISILISVCSI 396

Query: 55  SSVIHV 38
            +V+ V
Sbjct: 397 VNVLLV 402

>M4A6A_HUMAN (Q9H2W1) Membrane-spanning 4-domains subfamily A member 6A|
           (Four-span transmembrane protein 3) (CD20 antigen-like
           3)
          Length = 248

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 19/78 (24%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
 Frame = -1

Query: 256 SMAHVLREQIRYLLRSWKHACMHACILPSYRQRINLSTTCYISYFILPSLFCKTRTYVRF 77
           S+   L   + +++ S K A ++   L     + N+ T  Y+SYF   SL+         
Sbjct: 121 SILSALSALVGFIILSVKQATLNPASLQCELDKNNIPTRSYVSYFYHDSLYT-----TDC 175

Query: 76  YTTLCALSSVIH-VIMCT 26
           YT   +L+  +  +++CT
Sbjct: 176 YTAKASLAGTLSLMLICT 193

>NPC2_CAEEL (P34389) Niemann-Pick C1 protein homolog 2 precursor|
          Length = 1274

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 7/60 (11%)
 Frame = -1

Query: 193  MHACILPSYRQRINLSTTCY-------ISYFILPSLFCKTRTYVRFYTTLCALSSVIHVI 35
            +++   P Y Q + LSTT Y          F+  SLF +        T    LSS +H++
Sbjct: 1064 VYSTFFPYYEQYLTLSTTVYTLVVLVLFVAFVTISLFLRVNLAGSLVTVFVLLSSYLHLM 1123


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,143,657
Number of Sequences: 219361
Number of extensions: 795095
Number of successful extensions: 1793
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1791
length of database: 80,573,946
effective HSP length: 77
effective length of database: 63,683,149
effective search space used: 1528395576
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)