ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal5e24
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_467523.1| Oryza sativa (japonica cultivar-group), mRNA 452 e-124
2ref|XM_506946.1| PREDICTED Oryza sativa (japonica cultivar-group... 452 e-124
3ref|XM_467524.1| Oryza sativa (japonica cultivar-group), mRNA 452 e-124
4dbj|AK112042.1| Oryza sativa (japonica cultivar-group) cDNA clon... 452 e-124
5dbj|AK111973.1| Oryza sativa (japonica cultivar-group) cDNA clon... 452 e-124
6dbj|AK111506.1| Oryza sativa (japonica cultivar-group) cDNA clon... 452 e-124
7dbj|AK098883.1| Oryza sativa (japonica cultivar-group) cDNA clon... 452 e-124
8dbj|AK111669.1| Oryza sativa (japonica cultivar-group) cDNA clon... 428 e-116
9gb|AY596536.1| Saccharum officinarum clone SCJFRZ2007F05, comple... 408 e-110
10gb|AY106954.1| Zea mays PCO143990 mRNA sequence 371 2e-99
11dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 337 3e-89
12dbj|AP005052.3| Oryza sativa (japonica cultivar-group) genomic D... 337 3e-89
13dbj|AP004040.3| Oryza sativa (japonica cultivar-group) genomic D... 337 3e-89
14gb|BT023993.1| Zea mays clone EL01N0409G03 mRNA sequence 327 3e-86
15gb|BT016291.1| Zea mays clone Contig124 mRNA sequence 268 2e-68
16gb|AY108826.1| Zea mays PCO135885 mRNA sequence 74 7e-10
17ref|XM_483165.1| Oryza sativa (japonica cultivar-group), mRNA 72 3e-09
18ref|XM_507280.1| PREDICTED Oryza sativa (japonica cultivar-group... 72 3e-09
19dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 72 3e-09
20dbj|AP000364.1| Oryza sativa (japonica cultivar-group) genomic D... 72 3e-09
21dbj|AK121435.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 3e-09
22dbj|AK112033.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 3e-09
23gb|AY110591.1| Zea mays CL28492_1 mRNA sequence 60 1e-05
24gb|BT014346.1| Lycopersicon esculentum clone 133621F, mRNA sequence 54 7e-04
25ref|NM_125002.2| Arabidopsis thaliana unknown protein AT5G56190 ... 50 0.010
26ref|NM_180868.2| Arabidopsis thaliana unknown protein AT5G56190 ... 50 0.010
27gb|BT015617.1| Arabidopsis thaliana At5g56190 mRNA sequence 50 0.010
28gb|AY122989.1| Arabidopsis thaliana putative WD-repeat protein (... 50 0.010
29gb|AY080763.1| Arabidopsis thaliana putative WD-repeat protein (... 50 0.010
30emb|BX831656.1|CNS09ZQC Arabidopsis thaliana Full-length cDNA Co... 50 0.010
31dbj|AB011476.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 50 0.010
32gb|BT013486.1| Lycopersicon esculentum clone 132170R, mRNA sequence 48 0.041
33ref|XM_493960.1| Oryza sativa (japonica cultivar-group), Ozsa802... 46 0.16
34dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.16
35dbj|AP002854.2| Oryza sativa (japonica cultivar-group) genomic D... 46 0.16
36dbj|AP002071.2| Oryza sativa (japonica cultivar-group) genomic D... 46 0.16
37dbj|AK105084.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.16
38dbj|AK100886.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.16
39dbj|AP004898.1| Lotus japonicus genomic DNA, chromosome 3, clone... 46 0.16
40gb|AC146632.23| Medicago truncatula clone mth2-57b3, complete se... 44 0.64
41emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete g... 44 0.64
42gb|AF424783.1| Staphylococcus aureus phage phi 13, complete genome 44 0.64
43dbj|BA000017.4| Staphylococcus aureus subsp. aureus Mu50 DNA, co... 44 0.64
44emb|BX901884.7| Zebrafish DNA sequence from clone DKEY-89E13 in ... 44 0.64
45gb|CP000253.1| Staphylococcus aureus subsp. aureus NCTC 8325, co... 44 0.64
46dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, com... 44 0.64
47emb|BX510327.10| Zebrafish DNA sequence from clone CH211-253J24 ... 44 0.64
48emb|BX323889.13| Zebrafish DNA sequence from clone CH211-14G4 in... 44 0.64
49gb|AC116708.19| Mus musculus chromosome 1, clone RP23-70F22, com... 44 0.64
50dbj|AB009866.2| Bacteriophage phi PVL proviral DNA, complete seq... 44 0.64
51gb|AY344981.1| Sporisorium lepturi internal transcribed spacer 1... 42 2.5
52gb|AC110245.10| Mus musculus chromosome 3, clone RP23-251B16, co... 42 2.5
53gb|AC144375.14| Medicago truncatula clone mth2-11p13, complete s... 42 2.5
54gb|AC006507.21| Mus musculus strain 129S6/SvEvTac clone rp21-580... 42 2.5
55gb|AC140851.12| Mus musculus strain C57BL/6J clone rp23-358m4, c... 42 2.5
56emb|AL929583.5| Human DNA sequence from clone RP13-530G12 on chr... 42 2.5
57gb|AC005818.6| Mus musculus strain 129S6/SvEvTac chromosome 10 c... 42 2.5
58gb|AY084494.1| Arabidopsis thaliana clone 109499 mRNA, complete ... 42 2.5
59gb|AY740160.1| Sporisorium lepturi internal transcribed spacer 1... 42 2.5
60gb|AC006263.1|AC006263 Homo sapiens chromosome 17, clone hCIT.18... 42 2.5

>ref|XM_467523.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1763

 Score =  452 bits (228), Expect = e-124
 Identities = 432/500 (86%)
 Strand = Plus / Minus

                                                                        
Query: 231  cagcgagtcatgataccaattgttatacaggcgcccaaactggaggaggctaccatacgt 290
            |||||||||| ||||| | |  |||||||| || ||||||||||||||||| || || ||
Sbjct: 1605 cagcgagtcaagatacgagtgattatacagacggccaaactggaggaggctgccgtatgt 1546

                                                                        
Query: 291  tctatcccacacgcccacgaaaagggcgtctgtgtccgggctgaaggacatcccagatat 350
            |||||||||||| || || |||||   ||| |||||||||||||| ||||| ||||||||
Sbjct: 1545 tctatcccacacaccgacaaaaagcatgtcggtgtccgggctgaaagacatgccagatat 1486

                                                                        
Query: 351  ctcaccaaagaagtccagctcttgccttctcttgtagtcgctcttcacatcgaagatgtg 410
            ||||||||||||||||||||||||||||||  |||| || |||   |||||||||| |||
Sbjct: 1485 ctcaccaaagaagtccagctcttgccttctggtgtaatcactcccgacatcgaagacgtg 1426

                                                                        
Query: 411  cacaaagtccgctggttccgccatcgacaggaactgcccgtccgacgtgaagcggatcga 470
             ||||||||||||||||| |||||||||| ||||||||| || |||||||||||||| ||
Sbjct: 1425 gacaaagtccgctggttctgccatcgacatgaactgcccatctgacgtgaagcggattga 1366

                                                                        
Query: 471  tctaatggctccaaggttacctttcaatacatggactgctttcgataggttcctcgcgtc 530
            ||| |||||||||||||||||  |||| |||||||  | ||| || || |||| ||| ||
Sbjct: 1365 tcttatggctccaaggttacccctcaaaacatggagggatttagagagattccgcgcatc 1306

                                                                        
Query: 531  ccagattcggcatgtcttgtcttggttcccagtagcaaatgttcggccatcagggctcca 590
            ||| || ||||||||||| |||||||| |||||||||||||||| |||||| ||||||||
Sbjct: 1305 ccaaatccggcatgtcttatcttggttgccagtagcaaatgttctgccatctgggctcca 1246

                                                                        
Query: 591  ggctgatgcgaatgagaagtcatgatgacctttcatggaatgaagagtctttcctgaatt 650
             |||||||| || ||| | |||   |||||||||| ||||||||||||||||||||||||
Sbjct: 1245 agctgatgcaaacgagtaatcaaagtgacctttcaaggaatgaagagtctttcctgaatt 1186

                                                                        
Query: 651  ggcatcaataagtaaaccattaggatcatcccccacaataacaacaagctttccatcagg 710
            ||| ||||| ||||||||||||||||||||||||||||||||| |||||||||  |||||
Sbjct: 1185 ggcgtcaattagtaaaccattaggatcatcccccacaataacagcaagctttctgtcagg 1126

                                
Query: 711  gctcagtgatgtatgattca 730
             |||| || |||||||||||
Sbjct: 1125 actcaatgctgtatgattca 1106



to top

>ref|XM_506946.1| PREDICTED Oryza sativa (japonica cultivar-group), P0654B04.16-1 mRNA
          Length = 1805

 Score =  452 bits (228), Expect = e-124
 Identities = 432/500 (86%)
 Strand = Plus / Minus

                                                                        
Query: 231  cagcgagtcatgataccaattgttatacaggcgcccaaactggaggaggctaccatacgt 290
            |||||||||| ||||| | |  |||||||| || ||||||||||||||||| || || ||
Sbjct: 1647 cagcgagtcaagatacgagtgattatacagacggccaaactggaggaggctgccgtatgt 1588

                                                                        
Query: 291  tctatcccacacgcccacgaaaagggcgtctgtgtccgggctgaaggacatcccagatat 350
            |||||||||||| || || |||||   ||| |||||||||||||| ||||| ||||||||
Sbjct: 1587 tctatcccacacaccgacaaaaagcatgtcggtgtccgggctgaaagacatgccagatat 1528

                                                                        
Query: 351  ctcaccaaagaagtccagctcttgccttctcttgtagtcgctcttcacatcgaagatgtg 410
            ||||||||||||||||||||||||||||||  |||| || |||   |||||||||| |||
Sbjct: 1527 ctcaccaaagaagtccagctcttgccttctggtgtaatcactcccgacatcgaagacgtg 1468

                                                                        
Query: 411  cacaaagtccgctggttccgccatcgacaggaactgcccgtccgacgtgaagcggatcga 470
             ||||||||||||||||| |||||||||| ||||||||| || |||||||||||||| ||
Sbjct: 1467 gacaaagtccgctggttctgccatcgacatgaactgcccatctgacgtgaagcggattga 1408

                                                                        
Query: 471  tctaatggctccaaggttacctttcaatacatggactgctttcgataggttcctcgcgtc 530
            ||| |||||||||||||||||  |||| |||||||  | ||| || || |||| ||| ||
Sbjct: 1407 tcttatggctccaaggttacccctcaaaacatggagggatttagagagattccgcgcatc 1348

                                                                        
Query: 531  ccagattcggcatgtcttgtcttggttcccagtagcaaatgttcggccatcagggctcca 590
            ||| || ||||||||||| |||||||| |||||||||||||||| |||||| ||||||||
Sbjct: 1347 ccaaatccggcatgtcttatcttggttgccagtagcaaatgttctgccatctgggctcca 1288

                                                                        
Query: 591  ggctgatgcgaatgagaagtcatgatgacctttcatggaatgaagagtctttcctgaatt 650
             |||||||| || ||| | |||   |||||||||| ||||||||||||||||||||||||
Sbjct: 1287 agctgatgcaaacgagtaatcaaagtgacctttcaaggaatgaagagtctttcctgaatt 1228

                                                                        
Query: 651  ggcatcaataagtaaaccattaggatcatcccccacaataacaacaagctttccatcagg 710
            ||| ||||| ||||||||||||||||||||||||||||||||| |||||||||  |||||
Sbjct: 1227 ggcgtcaattagtaaaccattaggatcatcccccacaataacagcaagctttctgtcagg 1168

                                
Query: 711  gctcagtgatgtatgattca 730
             |||| || |||||||||||
Sbjct: 1167 actcaatgctgtatgattca 1148



to top

>ref|XM_467524.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1983

 Score =  452 bits (228), Expect = e-124
 Identities = 432/500 (86%)
 Strand = Plus / Minus

                                                                        
Query: 231  cagcgagtcatgataccaattgttatacaggcgcccaaactggaggaggctaccatacgt 290
            |||||||||| ||||| | |  |||||||| || ||||||||||||||||| || || ||
Sbjct: 1649 cagcgagtcaagatacgagtgattatacagacggccaaactggaggaggctgccgtatgt 1590

                                                                        
Query: 291  tctatcccacacgcccacgaaaagggcgtctgtgtccgggctgaaggacatcccagatat 350
            |||||||||||| || || |||||   ||| |||||||||||||| ||||| ||||||||
Sbjct: 1589 tctatcccacacaccgacaaaaagcatgtcggtgtccgggctgaaagacatgccagatat 1530

                                                                        
Query: 351  ctcaccaaagaagtccagctcttgccttctcttgtagtcgctcttcacatcgaagatgtg 410
            ||||||||||||||||||||||||||||||  |||| || |||   |||||||||| |||
Sbjct: 1529 ctcaccaaagaagtccagctcttgccttctggtgtaatcactcccgacatcgaagacgtg 1470

                                                                        
Query: 411  cacaaagtccgctggttccgccatcgacaggaactgcccgtccgacgtgaagcggatcga 470
             ||||||||||||||||| |||||||||| ||||||||| || |||||||||||||| ||
Sbjct: 1469 gacaaagtccgctggttctgccatcgacatgaactgcccatctgacgtgaagcggattga 1410

                                                                        
Query: 471  tctaatggctccaaggttacctttcaatacatggactgctttcgataggttcctcgcgtc 530
            ||| |||||||||||||||||  |||| |||||||  | ||| || || |||| ||| ||
Sbjct: 1409 tcttatggctccaaggttacccctcaaaacatggagggatttagagagattccgcgcatc 1350

                                                                        
Query: 531  ccagattcggcatgtcttgtcttggttcccagtagcaaatgttcggccatcagggctcca 590
            ||| || ||||||||||| |||||||| |||||||||||||||| |||||| ||||||||
Sbjct: 1349 ccaaatccggcatgtcttatcttggttgccagtagcaaatgttctgccatctgggctcca 1290

                                                                        
Query: 591  ggctgatgcgaatgagaagtcatgatgacctttcatggaatgaagagtctttcctgaatt 650
             |||||||| || ||| | |||   |||||||||| ||||||||||||||||||||||||
Sbjct: 1289 agctgatgcaaacgagtaatcaaagtgacctttcaaggaatgaagagtctttcctgaatt 1230

                                                                        
Query: 651  ggcatcaataagtaaaccattaggatcatcccccacaataacaacaagctttccatcagg 710
            ||| ||||| ||||||||||||||||||||||||||||||||| |||||||||  |||||
Sbjct: 1229 ggcgtcaattagtaaaccattaggatcatcccccacaataacagcaagctttctgtcagg 1170

                                
Query: 711  gctcagtgatgtatgattca 730
             |||| || |||||||||||
Sbjct: 1169 actcaatgctgtatgattca 1150



to top

>dbj|AK112042.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-D04, full
           insert sequence
          Length = 1262

 Score =  452 bits (228), Expect = e-124
 Identities = 432/500 (86%)
 Strand = Plus / Minus

                                                                       
Query: 231 cagcgagtcatgataccaattgttatacaggcgcccaaactggaggaggctaccatacgt 290
           |||||||||| ||||| | |  |||||||| || ||||||||||||||||| || || ||
Sbjct: 910 cagcgagtcaagatacgagtgattatacagacggccaaactggaggaggctgccgtatgt 851

                                                                       
Query: 291 tctatcccacacgcccacgaaaagggcgtctgtgtccgggctgaaggacatcccagatat 350
           |||||||||||| || || |||||   ||| |||||||||||||| ||||| ||||||||
Sbjct: 850 tctatcccacacaccgacaaaaagcatgtcggtgtccgggctgaaagacatgccagatat 791

                                                                       
Query: 351 ctcaccaaagaagtccagctcttgccttctcttgtagtcgctcttcacatcgaagatgtg 410
           ||||||||||||||||||||||||||||||  |||| || |||   |||||||||| |||
Sbjct: 790 ctcaccaaagaagtccagctcttgccttctggtgtaatcactcccgacatcgaagacgtg 731

                                                                       
Query: 411 cacaaagtccgctggttccgccatcgacaggaactgcccgtccgacgtgaagcggatcga 470
            ||||||||||||||||| |||||||||| ||||||||| || |||||||||||||| ||
Sbjct: 730 gacaaagtccgctggttctgccatcgacatgaactgcccatctgacgtgaagcggattga 671

                                                                       
Query: 471 tctaatggctccaaggttacctttcaatacatggactgctttcgataggttcctcgcgtc 530
           ||| |||||||||||||||||  |||| |||||||  | ||| || || |||| ||| ||
Sbjct: 670 tcttatggctccaaggttacccctcaaaacatggagggatttagagagattccgcgcatc 611

                                                                       
Query: 531 ccagattcggcatgtcttgtcttggttcccagtagcaaatgttcggccatcagggctcca 590
           ||| || ||||||||||| |||||||| |||||||||||||||| |||||| ||||||||
Sbjct: 610 ccaaatccggcatgtcttatcttggttgccagtagcaaatgttctgccatctgggctcca 551

                                                                       
Query: 591 ggctgatgcgaatgagaagtcatgatgacctttcatggaatgaagagtctttcctgaatt 650
            |||||||| || ||| | |||   |||||||||| ||||||||||||||||||||||||
Sbjct: 550 agctgatgcaaacgagtaatcaaagtgacctttcaaggaatgaagagtctttcctgaatt 491

                                                                       
Query: 651 ggcatcaataagtaaaccattaggatcatcccccacaataacaacaagctttccatcagg 710
           ||| ||||| ||||||||||||||||||||||||||||||||| |||||||||  |||||
Sbjct: 490 ggcgtcaattagtaaaccattaggatcatcccccacaataacagcaagctttctgtcagg 431

                               
Query: 711 gctcagtgatgtatgattca 730
            |||| || |||||||||||
Sbjct: 430 actcaatgctgtatgattca 411



to top

>dbj|AK111973.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-312-A04, full
           insert sequence
          Length = 943

 Score =  452 bits (228), Expect = e-124
 Identities = 432/500 (86%)
 Strand = Plus / Minus

                                                                       
Query: 231 cagcgagtcatgataccaattgttatacaggcgcccaaactggaggaggctaccatacgt 290
           |||||||||| ||||| | |  |||||||| || ||||||||||||||||| || || ||
Sbjct: 784 cagcgagtcaagatacgagtgattatacagacggccaaactggaggaggctgccgtatgt 725

                                                                       
Query: 291 tctatcccacacgcccacgaaaagggcgtctgtgtccgggctgaaggacatcccagatat 350
           |||||||||||| || || |||||   ||| |||||||||||||| ||||| ||||||||
Sbjct: 724 tctatcccacacaccgacaaaaagcatgtcggtgtccgggctgaaagacatgccagatat 665

                                                                       
Query: 351 ctcaccaaagaagtccagctcttgccttctcttgtagtcgctcttcacatcgaagatgtg 410
           ||||||||||||||||||||||||||||||  |||| || |||   |||||||||| |||
Sbjct: 664 ctcaccaaagaagtccagctcttgccttctggtgtaatcactcccgacatcgaagacgtg 605

                                                                       
Query: 411 cacaaagtccgctggttccgccatcgacaggaactgcccgtccgacgtgaagcggatcga 470
            ||||||||||||||||| |||||||||| ||||||||| || |||||||||||||| ||
Sbjct: 604 gacaaagtccgctggttctgccatcgacatgaactgcccatctgacgtgaagcggattga 545

                                                                       
Query: 471 tctaatggctccaaggttacctttcaatacatggactgctttcgataggttcctcgcgtc 530
           ||| |||||||||||||||||  |||| |||||||  | ||| || || |||| ||| ||
Sbjct: 544 tcttatggctccaaggttacccctcaaaacatggagggatttagagagattccgcgcatc 485

                                                                       
Query: 531 ccagattcggcatgtcttgtcttggttcccagtagcaaatgttcggccatcagggctcca 590
           ||| || ||||||||||| |||||||| |||||||||||||||| |||||| ||||||||
Sbjct: 484 ccaaatccggcatgtcttatcttggttgccagtagcaaatgttctgccatctgggctcca 425

                                                                       
Query: 591 ggctgatgcgaatgagaagtcatgatgacctttcatggaatgaagagtctttcctgaatt 650
            |||||||| || ||| | |||   |||||||||| ||||||||||||||||||||||||
Sbjct: 424 agctgatgcaaacgagtaatcaaagtgacctttcaaggaatgaagagtctttcctgaatt 365

                                                                       
Query: 651 ggcatcaataagtaaaccattaggatcatcccccacaataacaacaagctttccatcagg 710
           ||| ||||| ||||||||||||||||||||||||||||||||| |||||||||  |||||
Sbjct: 364 ggcgtcaattagtaaaccattaggatcatcccccacaataacagcaagctttctgtcagg 305

                               
Query: 711 gctcagtgatgtatgattca 730
            |||| || |||||||||||
Sbjct: 304 actcaatgctgtatgattca 285



to top

>dbj|AK111506.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001D05, full
            insert sequence
          Length = 1806

 Score =  452 bits (228), Expect = e-124
 Identities = 432/500 (86%)
 Strand = Plus / Minus

                                                                        
Query: 231  cagcgagtcatgataccaattgttatacaggcgcccaaactggaggaggctaccatacgt 290
            |||||||||| ||||| | |  |||||||| || ||||||||||||||||| || || ||
Sbjct: 1647 cagcgagtcaagatacgagtgattatacagacggccaaactggaggaggctgccgtatgt 1588

                                                                        
Query: 291  tctatcccacacgcccacgaaaagggcgtctgtgtccgggctgaaggacatcccagatat 350
            |||||||||||| || || |||||   ||| |||||||||||||| ||||| ||||||||
Sbjct: 1587 tctatcccacacaccgacaaaaagcatgtcggtgtccgggctgaaagacatgccagatat 1528

                                                                        
Query: 351  ctcaccaaagaagtccagctcttgccttctcttgtagtcgctcttcacatcgaagatgtg 410
            ||||||||||||||||||||||||||||||  |||| || |||   |||||||||| |||
Sbjct: 1527 ctcaccaaagaagtccagctcttgccttctggtgtaatcactcccgacatcgaagacgtg 1468

                                                                        
Query: 411  cacaaagtccgctggttccgccatcgacaggaactgcccgtccgacgtgaagcggatcga 470
             ||||||||||||||||| |||||||||| ||||||||| || |||||||||||||| ||
Sbjct: 1467 gacaaagtccgctggttctgccatcgacatgaactgcccatctgacgtgaagcggattga 1408

                                                                        
Query: 471  tctaatggctccaaggttacctttcaatacatggactgctttcgataggttcctcgcgtc 530
            ||| |||||||||||||||||  |||| |||||||  | ||| || || |||| ||| ||
Sbjct: 1407 tcttatggctccaaggttacccctcaaaacatggagggatttagagagattccgcgcatc 1348

                                                                        
Query: 531  ccagattcggcatgtcttgtcttggttcccagtagcaaatgttcggccatcagggctcca 590
            ||| || ||||||||||| |||||||| |||||||||||||||| |||||| ||||||||
Sbjct: 1347 ccaaatccggcatgtcttatcttggttgccagtagcaaatgttctgccatctgggctcca 1288

                                                                        
Query: 591  ggctgatgcgaatgagaagtcatgatgacctttcatggaatgaagagtctttcctgaatt 650
             |||||||| || ||| | |||   |||||||||| ||||||||||||||||||||||||
Sbjct: 1287 agctgatgcaaacgagtaatcaaagtgacctttcaaggaatgaagagtctttcctgaatt 1228

                                                                        
Query: 651  ggcatcaataagtaaaccattaggatcatcccccacaataacaacaagctttccatcagg 710
            ||| ||||| ||||||||||||||||||||||||||||||||| |||||||||  |||||
Sbjct: 1227 ggcgtcaattagtaaaccattaggatcatcccccacaataacagcaagctttctgtcagg 1168

                                
Query: 711  gctcagtgatgtatgattca 730
             |||| || |||||||||||
Sbjct: 1167 actcaatgctgtatgattca 1148



to top

>dbj|AK098883.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001H19, full
            insert sequence
          Length = 1764

 Score =  452 bits (228), Expect = e-124
 Identities = 432/500 (86%)
 Strand = Plus / Minus

                                                                        
Query: 231  cagcgagtcatgataccaattgttatacaggcgcccaaactggaggaggctaccatacgt 290
            |||||||||| ||||| | |  |||||||| || ||||||||||||||||| || || ||
Sbjct: 1605 cagcgagtcaagatacgagtgattatacagacggccaaactggaggaggctgccgtatgt 1546

                                                                        
Query: 291  tctatcccacacgcccacgaaaagggcgtctgtgtccgggctgaaggacatcccagatat 350
            |||||||||||| || || |||||   ||| |||||||||||||| ||||| ||||||||
Sbjct: 1545 tctatcccacacaccgacaaaaagcatgtcggtgtccgggctgaaagacatgccagatat 1486

                                                                        
Query: 351  ctcaccaaagaagtccagctcttgccttctcttgtagtcgctcttcacatcgaagatgtg 410
            ||||||||||||||||||||||||||||||  |||| || |||   |||||||||| |||
Sbjct: 1485 ctcaccaaagaagtccagctcttgccttctggtgtaatcactcccgacatcgaagacgtg 1426

                                                                        
Query: 411  cacaaagtccgctggttccgccatcgacaggaactgcccgtccgacgtgaagcggatcga 470
             ||||||||||||||||| |||||||||| ||||||||| || |||||||||||||| ||
Sbjct: 1425 gacaaagtccgctggttctgccatcgacatgaactgcccatctgacgtgaagcggattga 1366

                                                                        
Query: 471  tctaatggctccaaggttacctttcaatacatggactgctttcgataggttcctcgcgtc 530
            ||| |||||||||||||||||  |||| |||||||  | ||| || || |||| ||| ||
Sbjct: 1365 tcttatggctccaaggttacccctcaaaacatggagggatttagagagattccgcgcatc 1306

                                                                        
Query: 531  ccagattcggcatgtcttgtcttggttcccagtagcaaatgttcggccatcagggctcca 590
            ||| || ||||||||||| |||||||| |||||||||||||||| |||||| ||||||||
Sbjct: 1305 ccaaatccggcatgtcttatcttggttgccagtagcaaatgttctgccatctgggctcca 1246

                                                                        
Query: 591  ggctgatgcgaatgagaagtcatgatgacctttcatggaatgaagagtctttcctgaatt 650
             |||||||| || ||| | |||   |||||||||| ||||||||||||||||||||||||
Sbjct: 1245 agctgatgcaaacgagtaatcaaagtgacctttcaaggaatgaagagtctttcctgaatt 1186

                                                                        
Query: 651  ggcatcaataagtaaaccattaggatcatcccccacaataacaacaagctttccatcagg 710
            ||| ||||| ||||||||||||||||||||||||||||||||| |||||||||  |||||
Sbjct: 1185 ggcgtcaattagtaaaccattaggatcatcccccacaataacagcaagctttctgtcagg 1126

                                
Query: 711  gctcagtgatgtatgattca 730
             |||| || |||||||||||
Sbjct: 1125 actcaatgctgtatgattca 1106



to top

>dbj|AK111669.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013154D17, full
            insert sequence
          Length = 1983

 Score =  428 bits (216), Expect = e-116
 Identities = 430/500 (86%), Gaps = 1/500 (0%)
 Strand = Plus / Minus

                                                                        
Query: 231  cagcgagtcatgataccaattgttatacaggcgcccaaactggaggaggctaccatacgt 290
            |||||||||| ||||| | |  |||||||| || ||||||||||||||||| || || ||
Sbjct: 1649 cagcgagtcaagatacgagtgattatacagacggccaaactggaggaggctgccgtatgt 1590

                                                                        
Query: 291  tctatcccacacgcccacgaaaagggcgtctgtgtccgggctgaaggacatcccagatat 350
            || ||||||||| || || |||||   ||| |||||||||||||| ||||| ||||||||
Sbjct: 1589 tcaatcccacacaccgacaaaaagcatgtcggtgtccgggctgaaagacatgccagatat 1530

                                                                        
Query: 351  ctcaccaaagaagtccagctcttgccttctcttgtagtcgctcttcacatcgaagatgtg 410
            ||||||||||||||||||||||||||||||  |||| || |||   |||||||||| |||
Sbjct: 1529 ctcaccaaagaagtccagctcttgccttctggtgtaatcactcccgacatcgaagacgtg 1470

                                                                        
Query: 411  cacaaagtccgctggttccgccatcgacaggaactgcccgtccgacgtgaagcggatcga 470
             ||||||||||||||||| |||||||||| ||||||||| || |||||||||||||| ||
Sbjct: 1469 gacaaagtccgctggttctgccatcgacatgaactgcccatctgacgtgaagcggattga 1410

                                                                        
Query: 471  tctaatggctccaaggttacctttcaatacatggactgctttcgataggttcctcgcgtc 530
            ||| |||||||||||||||||  |||| |||||||  | ||| || || |||| ||| ||
Sbjct: 1409 tcttatggctccaaggttacccctcaaaacatggagggatttagagagattccgcgcatc 1350

                                                                        
Query: 531  ccagattcggcatgtcttgtcttggttcccagtagcaaatgttcggccatcagggctcca 590
            ||| |  ||||||||||| |||||||| |||||||||||||||| |||||| ||||||||
Sbjct: 1349 cca-aaccggcatgtcttatcttggttgccagtagcaaatgttctgccatctgggctcca 1291

                                                                        
Query: 591  ggctgatgcgaatgagaagtcatgatgacctttcatggaatgaagagtctttcctgaatt 650
             |||||||| || ||| | |||   |||||||||| ||||||||||||||||||||||||
Sbjct: 1290 agctgatgcaaacgagtaatcaaagtgacctttcaaggaatgaagagtctttcctgaatt 1231

                                                                        
Query: 651  ggcatcaataagtaaaccattaggatcatcccccacaataacaacaagctttccatcagg 710
            ||| ||||| ||||||||||||||||||||||||||||||||| |||||||||  |||||
Sbjct: 1230 ggcgtcaattagtaaaccattaggatcatcccccacaataacagcaagctttctgtcagg 1171

                                
Query: 711  gctcagtgatgtatgattca 730
             |||| || |||||||||||
Sbjct: 1170 actcaatgctgtatgattca 1151



to top

>gb|AY596536.1| Saccharum officinarum clone SCJFRZ2007F05, complete sequence
          Length = 1915

 Score =  408 bits (206), Expect = e-110
 Identities = 431/506 (85%)
 Strand = Plus / Minus

                                                                        
Query: 225  tcaaagcagcgagtcatgataccaattgttatacaggcgcccaaactggaggaggctacc 284
            ||||| ||| |||||| ||||| | | ||| |||||||| || ||||| || ||||| ||
Sbjct: 1531 tcaaaacagggagtcaagatacgagtagttgtacaggcggccgaactgaagcaggctgcc 1472

                                                                        
Query: 285  atacgttctatcccacacgcccacgaaaagggcgtctgtgtccgggctgaaggacatccc 344
            |||| | ||||||||||| || |||||||| | ||| ||||| |||||||| ||| | ||
Sbjct: 1471 atacatcctatcccacacaccgacgaaaagtgtgtcagtgtctgggctgaacgacgtgcc 1412

                                                                        
Query: 345  agatatctcaccaaagaagtccagctcttgccttctcttgtagtcgctcttcacatcgaa 404
             |||||||| ||||||||||||||||| |||||| | |||||||| |||||||| ||| |
Sbjct: 1411 ggatatctcgccaaagaagtccagctcctgccttttgttgtagtcactcttcacgtcgta 1352

                                                                        
Query: 405  gatgtgcacaaagtccgctggttccgccatcgacaggaactgcccgtccgacgtgaagcg 464
            ||||||||||||||| || ||||| ||||| |||| |||||| || ||||| ||||||||
Sbjct: 1351 gatgtgcacaaagtcagcaggttcggccatggacatgaactggccatccgaggtgaagcg 1292

                                                                        
Query: 465  gatcgatctaatggctccaaggttacctttcaatacatggactgctttcgataggttcct 524
            |||||| |  |||||||||||||||||  |||| |||||||| | ||| || || |||||
Sbjct: 1291 gatcgaccggatggctccaaggttacccctcaacacatggacggattttgagagattcct 1232

                                                                        
Query: 525  cgcgtcccagattcggcatgtcttgtcttggttcccagtagcaaatgttcggccatcagg 584
            | ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 1231 cacgtcccagattcggcatgtcttgtcttggttgccagtagcaaatgttcgcccatcagg 1172

                                                                        
Query: 585  gctccaggctgatgcgaatgagaagtcatgatgacctttcatggaatgaagagtctttcc 644
            |||||| || ||||| |||||  ||||  |||| ||||| ||||||||||| ||||||||
Sbjct: 1171 gctccaagccgatgcaaatgaatagtcccgatgtccttttatggaatgaagcgtctttcc 1112

                                                                        
Query: 645  tgaattggcatcaataagtaaaccattaggatcatcccccacaataacaacaagctttcc 704
             || |||||||||||||||| ||||| |||||||||||||||||||||||| | ||||| 
Sbjct: 1111 agagttggcatcaataagtagaccatcaggatcatcccccacaataacaactacctttct 1052

                                      
Query: 705  atcagggctcagtgatgtatgattca 730
             ||||| ||||  || ||||||||||
Sbjct: 1051 gtcaggactcaacgaagtatgattca 1026



to top

>gb|AY106954.1| Zea mays PCO143990 mRNA sequence
          Length = 1884

 Score =  371 bits (187), Expect = 2e-99
 Identities = 400/471 (84%)
 Strand = Plus / Minus

                                                                        
Query: 225  tcaaagcagcgagtcatgataccaattgttatacaggcgcccaaactggaggaggctacc 284
            ||||| ||| |||||| ||||| | | ||| |||||||| ||||| || || ||||| ||
Sbjct: 1534 tcaaaacagggagtcaagatacgagtagttgtacaggcggccaaattgtagcaggctgcc 1475

                                                                        
Query: 285  atacgttctatcccacacgcccacgaaaagggcgtctgtgtccgggctgaaggacatccc 344
            |||| | ||||||||||| || |||||||| | ||| ||||| |||||||| ||  | ||
Sbjct: 1474 atacatcctatcccacacaccaacgaaaagcgtgtcagtgtctgggctgaacgatgtgcc 1415

                                                                        
Query: 345  agatatctcaccaaagaagtccagctcttgccttctcttgtagtcgctcttcacatcgaa 404
             |||||||| ||||||||||||||||| |||||| | |||||||| |||||||| ||| |
Sbjct: 1414 ggatatctcgccaaagaagtccagctcctgccttttgttgtagtcactcttcacgtcgta 1355

                                                                        
Query: 405  gatgtgcacaaagtccgctggttccgccatcgacaggaactgcccgtccgacgtgaagcg 464
            ||||||||||||||| || ||||| ||||| |||| |||||| || ||||| ||||||||
Sbjct: 1354 gatgtgcacaaagtcagcaggttcagccatggacatgaactggccatccgaggtgaagcg 1295

                                                                        
Query: 465  gatcgatctaatggctccaaggttacctttcaatacatggactgctttcgataggttcct 524
            ||| || |  |||||||||||||||||  |||| |||||||| | ||| || ||||||||
Sbjct: 1294 gatggaccggatggctccaaggttacccctcaacacatggacggattttgaaaggttcct 1235

                                                                        
Query: 525  cgcgtcccagattcggcatgtcttgtcttggttcccagtagcaaatgttcggccatcagg 584
            | ||||||||||||||||||||||||||||||| || |||||||||||||| ||||||||
Sbjct: 1234 cacgtcccagattcggcatgtcttgtcttggttgccggtagcaaatgttcgcccatcagg 1175

                                                                        
Query: 585  gctccaggctgatgcgaatgagaagtcatgatgacctttcatggaatgaagagtctttcc 644
            |||||| || ||||| |||||| ||||  |||| ||||| ||||||||||  ||||||||
Sbjct: 1174 gctccaagccgatgcaaatgagtagtcccgatgtccttttatggaatgaactgtctttcc 1115

                                                               
Query: 645  tgaattggcatcaataagtaaaccattaggatcatcccccacaataacaac 695
             || || ||||||||||||| ||||| ||||||||| ||||||||||||||
Sbjct: 1114 agagtttgcatcaataagtagaccatcaggatcatcacccacaataacaac 1064



to top

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  337 bits (170), Expect = 3e-89
 Identities = 350/410 (85%)
 Strand = Plus / Plus

                                                                            
Query: 231      cagcgagtcatgataccaattgttatacaggcgcccaaactggaggaggctaccatacgt 290
                |||||||||| ||||| | |  |||||||| || ||||||||||||||||| || || ||
Sbjct: 29953315 cagcgagtcaagatacgagtgattatacagacggccaaactggaggaggctgccgtatgt 29953374

                                                                            
Query: 291      tctatcccacacgcccacgaaaagggcgtctgtgtccgggctgaaggacatcccagatat 350
                |||||||||||| || || |||||   ||| |||||||||||||| ||||| ||||||||
Sbjct: 29953375 tctatcccacacaccgacaaaaagcatgtcggtgtccgggctgaaagacatgccagatat 29953434

                                                                            
Query: 351      ctcaccaaagaagtccagctcttgccttctcttgtagtcgctcttcacatcgaagatgtg 410
                ||||||||||||||||||||||||||||||  |||| || |||   |||||||||| |||
Sbjct: 29953435 ctcaccaaagaagtccagctcttgccttctggtgtaatcactcccgacatcgaagacgtg 29953494

                                                                            
Query: 411      cacaaagtccgctggttccgccatcgacaggaactgcccgtccgacgtgaagcggatcga 470
                 ||||||||||||||||| |||||||||| ||||||||| || |||||||||||||| ||
Sbjct: 29953495 gacaaagtccgctggttctgccatcgacatgaactgcccatctgacgtgaagcggattga 29953554

                                                                            
Query: 471      tctaatggctccaaggttacctttcaatacatggactgctttcgataggttcctcgcgtc 530
                ||| |||||||||||||||||  |||| |||||||  | ||| || || |||| ||| ||
Sbjct: 29953555 tcttatggctccaaggttacccctcaaaacatggagggatttagagagattccgcgcatc 29953614

                                                                            
Query: 531      ccagattcggcatgtcttgtcttggttcccagtagcaaatgttcggccatcagggctcca 590
                ||| || ||||||||||| |||||||| |||||||||||||||| |||||| ||||||||
Sbjct: 29953615 ccaaatccggcatgtcttatcttggttgccagtagcaaatgttctgccatctgggctcca 29953674

                                                                  
Query: 591      ggctgatgcgaatgagaagtcatgatgacctttcatggaatgaagagtct 640
                 |||||||| || ||| | |||   |||||||||| ||||||||||||||
Sbjct: 29953675 agctgatgcaaacgagtaatcaaagtgacctttcaaggaatgaagagtct 29953724



 Score =  109 bits (55), Expect = 1e-20
 Identities = 79/87 (90%)
 Strand = Plus / Plus

                                                                            
Query: 639      ctttcctgaattggcatcaataagtaaaccattaggatcatcccccacaataacaacaag 698
                ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| ||||
Sbjct: 29953852 ctttcctgaattggcgtcaattagtaaaccattaggatcatcccccacaataacagcaag 29953911

                                           
Query: 699      ctttccatcagggctcagtgatgtatg 725
                |||||  ||||| |||| || ||||||
Sbjct: 29953912 ctttctgtcaggactcaatgctgtatg 29953938



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 59/65 (90%)
 Strand = Plus / Plus

                                                                            
Query: 322      gtgtccgggctgaaggacatcccagatatctcaccaaagaagtccagctcttgccttctc 381
                ||||| |||||||| ||||| |||||||||| ||| ||||||||||||||||||||||| 
Sbjct: 29965636 gtgtctgggctgaaagacattccagatatctgaccgaagaagtccagctcttgccttctg 29965695

                     
Query: 382      ttgta 386
                |||||
Sbjct: 29965696 ttgta 29965700



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                                   
Query: 252      gttatacaggcgcccaaactggaggaggctaccatacgttctatcccacac 302
                ||||||||| ||  |||||||||||||||| ||||| ||||||||||||||
Sbjct: 29963910 gttatacagacggtcaaactggaggaggctgccatatgttctatcccacac 29963960



to top

>dbj|AP005052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0654B04
          Length = 156907

 Score =  337 bits (170), Expect = 3e-89
 Identities = 350/410 (85%)
 Strand = Plus / Plus

                                                                         
Query: 231   cagcgagtcatgataccaattgttatacaggcgcccaaactggaggaggctaccatacgt 290
             |||||||||| ||||| | |  |||||||| || ||||||||||||||||| || || ||
Sbjct: 53591 cagcgagtcaagatacgagtgattatacagacggccaaactggaggaggctgccgtatgt 53650

                                                                         
Query: 291   tctatcccacacgcccacgaaaagggcgtctgtgtccgggctgaaggacatcccagatat 350
             |||||||||||| || || |||||   ||| |||||||||||||| ||||| ||||||||
Sbjct: 53651 tctatcccacacaccgacaaaaagcatgtcggtgtccgggctgaaagacatgccagatat 53710

                                                                         
Query: 351   ctcaccaaagaagtccagctcttgccttctcttgtagtcgctcttcacatcgaagatgtg 410
             ||||||||||||||||||||||||||||||  |||| || |||   |||||||||| |||
Sbjct: 53711 ctcaccaaagaagtccagctcttgccttctggtgtaatcactcccgacatcgaagacgtg 53770

                                                                         
Query: 411   cacaaagtccgctggttccgccatcgacaggaactgcccgtccgacgtgaagcggatcga 470
              ||||||||||||||||| |||||||||| ||||||||| || |||||||||||||| ||
Sbjct: 53771 gacaaagtccgctggttctgccatcgacatgaactgcccatctgacgtgaagcggattga 53830

                                                                         
Query: 471   tctaatggctccaaggttacctttcaatacatggactgctttcgataggttcctcgcgtc 530
             ||| |||||||||||||||||  |||| |||||||  | ||| || || |||| ||| ||
Sbjct: 53831 tcttatggctccaaggttacccctcaaaacatggagggatttagagagattccgcgcatc 53890

                                                                         
Query: 531   ccagattcggcatgtcttgtcttggttcccagtagcaaatgttcggccatcagggctcca 590
             ||| || ||||||||||| |||||||| |||||||||||||||| |||||| ||||||||
Sbjct: 53891 ccaaatccggcatgtcttatcttggttgccagtagcaaatgttctgccatctgggctcca 53950

                                                               
Query: 591   ggctgatgcgaatgagaagtcatgatgacctttcatggaatgaagagtct 640
              |||||||| || ||| | |||   |||||||||| ||||||||||||||
Sbjct: 53951 agctgatgcaaacgagtaatcaaagtgacctttcaaggaatgaagagtct 54000



 Score =  109 bits (55), Expect = 1e-20
 Identities = 79/87 (90%)
 Strand = Plus / Plus

                                                                         
Query: 639   ctttcctgaattggcatcaataagtaaaccattaggatcatcccccacaataacaacaag 698
             ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| ||||
Sbjct: 54128 ctttcctgaattggcgtcaattagtaaaccattaggatcatcccccacaataacagcaag 54187

                                        
Query: 699   ctttccatcagggctcagtgatgtatg 725
             |||||  ||||| |||| || ||||||
Sbjct: 54188 ctttctgtcaggactcaatgctgtatg 54214



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 59/65 (90%)
 Strand = Plus / Plus

                                                                         
Query: 322   gtgtccgggctgaaggacatcccagatatctcaccaaagaagtccagctcttgccttctc 381
             ||||| |||||||| ||||| |||||||||| ||| ||||||||||||||||||||||| 
Sbjct: 65912 gtgtctgggctgaaagacattccagatatctgaccgaagaagtccagctcttgccttctg 65971

                  
Query: 382   ttgta 386
             |||||
Sbjct: 65972 ttgta 65976



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                                
Query: 252   gttatacaggcgcccaaactggaggaggctaccatacgttctatcccacac 302
             ||||||||| ||  |||||||||||||||| ||||| ||||||||||||||
Sbjct: 64186 gttatacagacggtcaaactggaggaggctgccatatgttctatcccacac 64236



to top

>dbj|AP004040.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1008_D06
          Length = 112768

 Score =  337 bits (170), Expect = 3e-89
 Identities = 350/410 (85%)
 Strand = Plus / Plus

                                                                          
Query: 231    cagcgagtcatgataccaattgttatacaggcgcccaaactggaggaggctaccatacgt 290
              |||||||||| ||||| | |  |||||||| || ||||||||||||||||| || || ||
Sbjct: 110280 cagcgagtcaagatacgagtgattatacagacggccaaactggaggaggctgccgtatgt 110339

                                                                          
Query: 291    tctatcccacacgcccacgaaaagggcgtctgtgtccgggctgaaggacatcccagatat 350
              |||||||||||| || || |||||   ||| |||||||||||||| ||||| ||||||||
Sbjct: 110340 tctatcccacacaccgacaaaaagcatgtcggtgtccgggctgaaagacatgccagatat 110399

                                                                          
Query: 351    ctcaccaaagaagtccagctcttgccttctcttgtagtcgctcttcacatcgaagatgtg 410
              ||||||||||||||||||||||||||||||  |||| || |||   |||||||||| |||
Sbjct: 110400 ctcaccaaagaagtccagctcttgccttctggtgtaatcactcccgacatcgaagacgtg 110459

                                                                          
Query: 411    cacaaagtccgctggttccgccatcgacaggaactgcccgtccgacgtgaagcggatcga 470
               ||||||||||||||||| |||||||||| ||||||||| || |||||||||||||| ||
Sbjct: 110460 gacaaagtccgctggttctgccatcgacatgaactgcccatctgacgtgaagcggattga 110519

                                                                          
Query: 471    tctaatggctccaaggttacctttcaatacatggactgctttcgataggttcctcgcgtc 530
              ||| |||||||||||||||||  |||| |||||||  | ||| || || |||| ||| ||
Sbjct: 110520 tcttatggctccaaggttacccctcaaaacatggagggatttagagagattccgcgcatc 110579

                                                                          
Query: 531    ccagattcggcatgtcttgtcttggttcccagtagcaaatgttcggccatcagggctcca 590
              ||| || ||||||||||| |||||||| |||||||||||||||| |||||| ||||||||
Sbjct: 110580 ccaaatccggcatgtcttatcttggttgccagtagcaaatgttctgccatctgggctcca 110639

                                                                
Query: 591    ggctgatgcgaatgagaagtcatgatgacctttcatggaatgaagagtct 640
               |||||||| || ||| | |||   |||||||||| ||||||||||||||
Sbjct: 110640 agctgatgcaaacgagtaatcaaagtgacctttcaaggaatgaagagtct 110689



 Score =  109 bits (55), Expect = 1e-20
 Identities = 79/87 (90%)
 Strand = Plus / Plus

                                                                          
Query: 639    ctttcctgaattggcatcaataagtaaaccattaggatcatcccccacaataacaacaag 698
              ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| ||||
Sbjct: 110817 ctttcctgaattggcgtcaattagtaaaccattaggatcatcccccacaataacagcaag 110876

                                         
Query: 699    ctttccatcagggctcagtgatgtatg 725
              |||||  ||||| |||| || ||||||
Sbjct: 110877 ctttctgtcaggactcaatgctgtatg 110903



to top

>gb|BT023993.1| Zea mays clone EL01N0409G03 mRNA sequence
          Length = 1294

 Score =  327 bits (165), Expect = 3e-86
 Identities = 351/413 (84%)
 Strand = Plus / Minus

                                                                        
Query: 283  ccatacgttctatcccacacgcccacgaaaagggcgtctgtgtccgggctgaaggacatc 342
            |||||| | ||||||||||| || |||||||| | ||| ||||| |||||||| ||  | 
Sbjct: 1085 ccatacatcctatcccacacaccaacgaaaagcgtgtcagtgtctgggctgaacgatgtg 1026

                                                                        
Query: 343  ccagatatctcaccaaagaagtccagctcttgccttctcttgtagtcgctcttcacatcg 402
            || |||||||| ||||||||||||||||| |||||| | |||||| | |||||||| |||
Sbjct: 1025 ccggatatctcgccaaagaagtccagctcctgccttttgttgtaggcactcttcacgtcg 966

                                                                        
Query: 403  aagatgtgcacaaagtccgctggttccgccatcgacaggaactgcccgtccgacgtgaag 462
             | |||||||||||||| |  ||||| ||||| |||| |||||| || ||||| ||||||
Sbjct: 965  taaatgtgcacaaagtcaggaggttcagccatggacatgaactggccatccgaggtgaag 906

                                                                        
Query: 463  cggatcgatctaatggctccaaggttacctttcaatacatggactgctttcgataggttc 522
            ||||| || |  |||||||||||||||||  |||| |||||||| | ||| || ||||||
Sbjct: 905  cggatggaccggatggctccaaggttacccctcaacacatggacggattttgagaggttc 846

                                                                        
Query: 523  ctcgcgtcccagattcggcatgtcttgtcttggttcccagtagcaaatgttcggccatca 582
            ||| ||||||||||||||||||||||||||||||| || |||||||||||||| ||||||
Sbjct: 845  ctcacgtcccagattcggcatgtcttgtcttggttgccggtagcaaatgttcgcccatca 786

                                                                        
Query: 583  gggctccaggctgatgcgaatgagaagtcatgatgacctttcatggaatgaagagtcttt 642
            |||||||| || ||||| |||||| ||||  |||| ||||| ||||||||||  ||||||
Sbjct: 785  gggctccaagccgatgcaaatgagtagtcccgatgtccttttatggaatgaactgtcttt 726

                                                                 
Query: 643  cctgaattggcatcaataagtaaaccattaggatcatcccccacaataacaac 695
            || || || ||||||||||||| ||||| ||||||||| ||||||||||||||
Sbjct: 725  ccagagtttgcatcaataagtagaccatcaggatcatcacccacaataacaac 673



to top

>gb|BT016291.1| Zea mays clone Contig124 mRNA sequence
          Length = 687

 Score =  268 bits (135), Expect = 2e-68
 Identities = 324/387 (83%)
 Strand = Plus / Minus

                                                                       
Query: 225 tcaaagcagcgagtcatgataccaattgttatacaggcgcccaaactggaggaggctacc 284
           ||||| ||| |||||| ||||| | | ||| | |||||| ||||| || || ||||| ||
Sbjct: 390 tcaaaacagggagtcaagatacgagtagttgtccaggcggccaaattgtagcaggctgcc 331

                                                                       
Query: 285 atacgttctatcccacacgcccacgaaaagggcgtctgtgtccgggctgaaggacatccc 344
           |||| |  |||||||||| || |||||||| | ||| ||||| |||||||| ||  | ||
Sbjct: 330 atacatcgtatcccacacaccaacgaaaagcgtgtcagtgtctgggctgaacgatgtgcc 271

                                                                       
Query: 345 agatatctcaccaaagaagtccagctcttgccttctcttgtagtcgctcttcacatcgaa 404
            |||||||| ||||||||||||||||| |||||| | |||||||| |||||||| ||| |
Sbjct: 270 ggatatctcgccaaagaagtccagctcctgccttttgttgtagtcactcttcacgtcgta 211

                                                                       
Query: 405 gatgtgcacaaagtccgctggttccgccatcgacaggaactgcccgtccgacgtgaagcg 464
            |||||||||||||| || ||||| ||||| |||| |||||| || ||||| ||||||||
Sbjct: 210 aatgtgcacaaagtcagcaggttcagccatggacatgaactggccatccgaggtgaagcg 151

                                                                       
Query: 465 gatcgatctaatggctccaaggttacctttcaatacatggactgctttcgataggttcct 524
           ||| || |  |||||||||||||||||  |||| |||||||| | ||| || ||||||||
Sbjct: 150 gatggaccggatggctccaaggttacccctcaacacatggacggattttgagaggttcct 91

                                                                       
Query: 525 cgcgtcccagattcggcatgtcttgtcttggttcccagtagcaaatgttcggccatcagg 584
           | ||||||| ||||||||||||||||||||||| || |||||||||||||| ||||||||
Sbjct: 90  cacgtcccaaattcggcatgtcttgtcttggttgccggtagcaaatgttcgcccatcagg 31

                                      
Query: 585 gctccaggctgatgcgaatgagaagtc 611
           |||||| || ||||| |||||| ||||
Sbjct: 30  gctccaagccgatgcaaatgagtagtc 4



to top

>gb|AY108826.1| Zea mays PCO135885 mRNA sequence
          Length = 614

 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 148/185 (80%)
 Strand = Plus / Minus

                                                                       
Query: 322 gtgtccgggctgaaggacatcccagatatctcaccaaagaagtccagctcttgccttctc 381
           ||||| |||||||||||||| || |||| ||| |||||||| ||||  || || ||  | 
Sbjct: 354 gtgtcggggctgaaggacataccggatacctcgccaaagaaatccaattcctgtctctta 295

                                                                       
Query: 382 ttgtagtcgctcttcacatcgaagatgtgcacaaagtccgctggttccgccatcgacagg 441
           |||||||| || || |  || |||||||| |||||||| |||| ||| |||||||||| |
Sbjct: 294 ttgtagtcacttttgatgtcaaagatgtggacaaagtctgctgcttctgccatcgacaag 235

                                                                       
Query: 442 aactgcccgtccgacgtgaagcggatcgatctaatggctccaaggttacctttcaataca 501
           || |||||||| || || || || || ||||| || ||||||| ||| ||| |||| |||
Sbjct: 234 aagtgcccgtcggatgtaaaacgaatagatcttattgctccaacgttgcctctcaagaca 175

                
Query: 502 tggac 506
           |||||
Sbjct: 174 tggac 170



to top

>ref|XM_483165.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1716

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 78/92 (84%)
 Strand = Plus / Minus

                                                                        
Query: 529  tcccagattcggcatgtcttgtcttggttcccagtagcaaatgttcggccatcagggctc 588
            |||||||| | |||||||||||||||||| ||||| || ||||| |||||||| ||| ||
Sbjct: 1184 tcccagatcctgcatgtcttgtcttggttaccagtcgcgaatgtccggccatctgggttc 1125

                                            
Query: 589  caggctgatgcgaatgagaagtcatgatgacc 620
            || ||||| ||||| ||| ||||  |||||||
Sbjct: 1124 cacgctgacgcgaaagagtagtccagatgacc 1093



to top

>ref|XM_507280.1| PREDICTED Oryza sativa (japonica cultivar-group), P0026F07.19 mRNA
          Length = 1924

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 78/92 (84%)
 Strand = Plus / Minus

                                                                        
Query: 529  tcccagattcggcatgtcttgtcttggttcccagtagcaaatgttcggccatcagggctc 588
            |||||||| | |||||||||||||||||| ||||| || ||||| |||||||| ||| ||
Sbjct: 1195 tcccagatcctgcatgtcttgtcttggttaccagtcgcgaatgtccggccatctgggttc 1136

                                            
Query: 589  caggctgatgcgaatgagaagtcatgatgacc 620
            || ||||| ||||| ||| ||||  |||||||
Sbjct: 1135 cacgctgacgcgaaagagtagtccagatgacc 1104



to top

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 78/92 (84%)
 Strand = Plus / Minus

                                                                            
Query: 529      tcccagattcggcatgtcttgtcttggttcccagtagcaaatgttcggccatcagggctc 588
                |||||||| | |||||||||||||||||| ||||| || ||||| |||||||| ||| ||
Sbjct: 24571385 tcccagatcctgcatgtcttgtcttggttaccagtcgcgaatgtccggccatctgggttc 24571326

                                                
Query: 589      caggctgatgcgaatgagaagtcatgatgacc 620
                || ||||| ||||| ||| ||||  |||||||
Sbjct: 24571325 cacgctgacgcgaaagagtagtccagatgacc 24571294



to top

>dbj|AP000364.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0026F07
          Length = 137354

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 78/92 (84%)
 Strand = Plus / Minus

                                                                         
Query: 529   tcccagattcggcatgtcttgtcttggttcccagtagcaaatgttcggccatcagggctc 588
             |||||||| | |||||||||||||||||| ||||| || ||||| |||||||| ||| ||
Sbjct: 79645 tcccagatcctgcatgtcttgtcttggttaccagtcgcgaatgtccggccatctgggttc 79586

                                             
Query: 589   caggctgatgcgaatgagaagtcatgatgacc 620
             || ||||| ||||| ||| ||||  |||||||
Sbjct: 79585 cacgctgacgcgaaagagtagtccagatgacc 79554



to top

>dbj|AK121435.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023140A17, full
            insert sequence
          Length = 1924

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 78/92 (84%)
 Strand = Plus / Minus

                                                                        
Query: 529  tcccagattcggcatgtcttgtcttggttcccagtagcaaatgttcggccatcagggctc 588
            |||||||| | |||||||||||||||||| ||||| || ||||| |||||||| ||| ||
Sbjct: 1195 tcccagatcctgcatgtcttgtcttggttaccagtcgcgaatgtccggccatctgggttc 1136

                                            
Query: 589  caggctgatgcgaatgagaagtcatgatgacc 620
            || ||||| ||||| ||| ||||  |||||||
Sbjct: 1135 cacgctgacgcgaaagagtagtccagatgacc 1104



to top

>dbj|AK112033.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-C09, full
            insert sequence
          Length = 1716

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 78/92 (84%)
 Strand = Plus / Minus

                                                                        
Query: 529  tcccagattcggcatgtcttgtcttggttcccagtagcaaatgttcggccatcagggctc 588
            |||||||| | |||||||||||||||||| ||||| || ||||| |||||||| ||| ||
Sbjct: 1184 tcccagatcctgcatgtcttgtcttggttaccagtcgcgaatgtccggccatctgggttc 1125

                                            
Query: 589  caggctgatgcgaatgagaagtcatgatgacc 620
            || ||||| ||||| ||| ||||  |||||||
Sbjct: 1124 cacgctgacgcgaaagagtagtccagatgacc 1093



to top

>gb|AY110591.1| Zea mays CL28492_1 mRNA sequence
          Length = 796

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 99/122 (81%)
 Strand = Plus / Plus

                                                                       
Query: 349 atctcaccaaagaagtccagctcttgccttctcttgtagtcgctcttcacatcgaagatg 408
           ||||||||||||||||||||||| ||| | ||  ||||  | ||||  ||||||||||||
Sbjct: 457 atctcaccaaagaagtccagctcctgcttcctgctgtacccactctcaacatcgaagatg 516

                                                                       
Query: 409 tgcacaaagtccgctggttccgccatcgacaggaactgcccgtccgacgtgaagcggatc 468
           || |  |||||||| ||||| | ||||| || ||||| |||||| | |||| |||| |||
Sbjct: 517 tggatgaagtccgcgggttcagtcatcgccatgaacttcccgtctggcgtgtagcgaatc 576

             
Query: 469 ga 470
           ||
Sbjct: 577 ga 578



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 45/52 (86%)
 Strand = Plus / Plus

                                                               
Query: 527 cgtcccagattcggcatgtcttgtcttggttcccagtagcaaatgttcggcc 578
           |||||||||  | ||| ||||||||||||||||| || || |||||||||||
Sbjct: 635 cgtcccagaccctgcacgtcttgtcttggttccccgtggcgaatgttcggcc 686



to top

>gb|BT014346.1| Lycopersicon esculentum clone 133621F, mRNA sequence
          Length = 1664

 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 63/75 (84%)
 Strand = Plus / Minus

                                                                        
Query: 528  gtcccagattcggcatgtcttgtcttggttcccagtagcaaatgttcggccatcagggct 587
            |||||| ||||| || || |||||||| |||||||| ||||| || ||||||||||||  
Sbjct: 1115 gtcccaaattcgacaggttttgtcttgattcccagtggcaaaggtacggccatcagggtg 1056

                           
Query: 588  ccaggctgatgcgaa 602
            |||||| || |||||
Sbjct: 1055 ccaggcagacgcgaa 1041



to top

>ref|NM_125002.2| Arabidopsis thaliana unknown protein AT5G56190 transcript variant
            AT5G56190.2 mRNA, complete cds
          Length = 1777

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 79/97 (81%)
 Strand = Plus / Minus

                                                                        
Query: 477  ggctccaaggttacctttcaatacatggactgctttcgataggttcctcgcgtcccagat 536
            |||||||||||||||||| |  |||  ||||| || ||| || ||||| | |||||| ||
Sbjct: 1257 ggctccaaggttaccttttaggacagcgactgattccgagagtttccttgtgtcccaaat 1198

                                                 
Query: 537  tcggcatgtcttgtcttggttcccagtagcaaatgtt 573
             || || |||||||||||||| || || |||||||||
Sbjct: 1197 acgacaggtcttgtcttggtttcctgtggcaaatgtt 1161



to top

>ref|NM_180868.2| Arabidopsis thaliana unknown protein AT5G56190 transcript variant
            AT5G56190.1 mRNA, complete cds
          Length = 1695

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 79/97 (81%)
 Strand = Plus / Minus

                                                                        
Query: 477  ggctccaaggttacctttcaatacatggactgctttcgataggttcctcgcgtcccagat 536
            |||||||||||||||||| |  |||  ||||| || ||| || ||||| | |||||| ||
Sbjct: 1175 ggctccaaggttaccttttaggacagcgactgattccgagagtttccttgtgtcccaaat 1116

                                                 
Query: 537  tcggcatgtcttgtcttggttcccagtagcaaatgtt 573
             || || |||||||||||||| || || |||||||||
Sbjct: 1115 acgacaggtcttgtcttggtttcctgtggcaaatgtt 1079



to top

>gb|BT015617.1| Arabidopsis thaliana At5g56190 mRNA sequence
          Length = 1341

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 79/97 (81%)
 Strand = Plus / Minus

                                                                        
Query: 477  ggctccaaggttacctttcaatacatggactgctttcgataggttcctcgcgtcccagat 536
            |||||||||||||||||| |  |||  ||||| || ||| || ||||| | |||||| ||
Sbjct: 1089 ggctccaaggttaccttttaggacagcgactgattccgagagtttccttgtgtcccaaat 1030

                                                 
Query: 537  tcggcatgtcttgtcttggttcccagtagcaaatgtt 573
             || || |||||||||||||| || || |||||||||
Sbjct: 1029 acgacaggtcttgtcttggtttcctgtggcaaatgtt 993



to top

>gb|AY122989.1| Arabidopsis thaliana putative WD-repeat protein (At5g56190) mRNA,
            complete cds
          Length = 1357

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 79/97 (81%)
 Strand = Plus / Minus

                                                                        
Query: 477  ggctccaaggttacctttcaatacatggactgctttcgataggttcctcgcgtcccagat 536
            |||||||||||||||||| |  |||  ||||| || ||| || ||||| | |||||| ||
Sbjct: 1074 ggctccaaggttaccttttaggacagcgactgattccgagagtttccttgtgtcccaaat 1015

                                                 
Query: 537  tcggcatgtcttgtcttggttcccagtagcaaatgtt 573
             || || |||||||||||||| || || |||||||||
Sbjct: 1014 acgacaggtcttgtcttggtttcctgtggcaaatgtt 978



to top

>gb|AY080763.1| Arabidopsis thaliana putative WD-repeat protein (At5g56190) mRNA,
            complete cds
          Length = 1637

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 79/97 (81%)
 Strand = Plus / Minus

                                                                        
Query: 477  ggctccaaggttacctttcaatacatggactgctttcgataggttcctcgcgtcccagat 536
            |||||||||||||||||| |  |||  ||||| || ||| || ||||| | |||||| ||
Sbjct: 1148 ggctccaaggttaccttttaggacagcgactgattccgagagtttccttgtgtcccaaat 1089

                                                 
Query: 537  tcggcatgtcttgtcttggttcccagtagcaaatgtt 573
             || || |||||||||||||| || || |||||||||
Sbjct: 1088 acgacaggtcttgtcttggtttcctgtggcaaatgtt 1052



to top

>emb|BX831656.1|CNS09ZQC Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH21ZE02 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1599

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 79/97 (81%)
 Strand = Plus / Minus

                                                                        
Query: 477  ggctccaaggttacctttcaatacatggactgctttcgataggttcctcgcgtcccagat 536
            |||||||||||||||||| |  |||  ||||| || ||| || ||||| | |||||| ||
Sbjct: 1175 ggctccaaggttaccttttaggacagcgactgattccgagagtttccttgtgtcccaaat 1116

                                                 
Query: 537  tcggcatgtcttgtcttggttcccagtagcaaatgtt 573
             || || |||||||||||||| || || |||||||||
Sbjct: 1115 acgacaggtcttgtcttggtttcctgtggcaaatgtt 1079



to top

>dbj|AB011476.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MDA7
          Length = 82033

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 79/97 (81%)
 Strand = Plus / Minus

                                                                         
Query: 477   ggctccaaggttacctttcaatacatggactgctttcgataggttcctcgcgtcccagat 536
             |||||||||||||||||| |  |||  ||||| || ||| || ||||| | |||||| ||
Sbjct: 78977 ggctccaaggttaccttttaggacagcgactgattccgagagtttccttgtgtcccaaat 78918

                                                  
Query: 537   tcggcatgtcttgtcttggttcccagtagcaaatgtt 573
              || || |||||||||||||| || || |||||||||
Sbjct: 78917 acgacaggtcttgtcttggtttcctgtggcaaatgtt 78881



to top

>gb|BT013486.1| Lycopersicon esculentum clone 132170R, mRNA sequence
          Length = 1978

 Score = 48.1 bits (24), Expect = 0.041
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                        
Query: 663  taaaccattaggatcatcccccacaataacaacaagctttccatcagggctcagtgatgt 722
            |||||| | ||||| |||||| || ||  ||| |||||| ||||| ||||||||||||| 
Sbjct: 1126 taaaccttcaggattatccccaactattgcaataagcttgccatcggggctcagtgatgc 1067

                    
Query: 723  atgattca 730
            ||||||||
Sbjct: 1066 atgattca 1059



to top

>ref|XM_493960.1| Oryza sativa (japonica cultivar-group), Ozsa8025 predicted mRNA
          Length = 1425

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                       
Query: 527  cgtcccagattcggcatgtcttgtcttggttcccagtagcaaatgttcggccatcaggg 585
            |||||||||  ||||| |||||||||||||| || || || || || ||||||||||||
Sbjct: 1123 cgtcccagacgcggcaggtcttgtcttggttaccggttgcgaaggtgcggccatcaggg 1065



to top

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                          
Query: 527     cgtcccagattcggcatgtcttgtcttggttcccagtagcaaatgttcggccatcaggg 585
               |||||||||  ||||| |||||||||||||| || || || || || ||||||||||||
Sbjct: 3637907 cgtcccagacgcggcaggtcttgtcttggttaccggttgcgaaggtgcggccatcaggg 3637849



to top

>dbj|AP002854.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0014B15
          Length = 158821

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                        
Query: 527   cgtcccagattcggcatgtcttgtcttggttcccagtagcaaatgttcggccatcaggg 585
             |||||||||  ||||| |||||||||||||| || || || || || ||||||||||||
Sbjct: 32135 cgtcccagacgcggcaggtcttgtcttggttaccggttgcgaaggtgcggccatcaggg 32077



to top

>dbj|AP002071.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0675A05
          Length = 131972

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                         
Query: 527    cgtcccagattcggcatgtcttgtcttggttcccagtagcaaatgttcggccatcaggg 585
              |||||||||  ||||| |||||||||||||| || || || || || ||||||||||||
Sbjct: 129744 cgtcccagacgcggcaggtcttgtcttggttaccggttgcgaaggtgcggccatcaggg 129686



to top

>dbj|AK105084.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-H01, full
           insert sequence
          Length = 1171

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                      
Query: 527 cgtcccagattcggcatgtcttgtcttggttcccagtagcaaatgttcggccatcaggg 585
           |||||||||  ||||| |||||||||||||| || || || || || ||||||||||||
Sbjct: 652 cgtcccagacgcggcaggtcttgtcttggttaccggttgcgaaggtgcggccatcaggg 594



to top

>dbj|AK100886.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023128H22, full
            insert sequence
          Length = 1958

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                       
Query: 527  cgtcccagattcggcatgtcttgtcttggttcccagtagcaaatgttcggccatcaggg 585
            |||||||||  ||||| |||||||||||||| || || || || || ||||||||||||
Sbjct: 1420 cgtcccagacgcggcaggtcttgtcttggttaccggttgcgaaggtgcggccatcaggg 1362



to top

>dbj|AP004898.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT01P23, TM0047b,
             complete sequence
          Length = 69411

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                                
Query: 309   gaaaagggcgtctgtgtccgggctgaaggacatcccagatatctcaccaaa 359
             ||||||||  || |||||||| ||||| || || |||||||||||||||||
Sbjct: 42747 gaaaagggattcagtgtccggactgaaagagatgccagatatctcaccaaa 42797



 Score = 44.1 bits (22), Expect = 0.64
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                       
Query: 528   gtcccagattcggcatgtcttgtcttggttcccagtagcaaa 569
             |||||| |||||||| || ||||| ||||| |||||||||||
Sbjct: 42966 gtcccaaattcggcaggttttgtcctggtttccagtagcaaa 43007



to top

>gb|AC146632.23| Medicago truncatula clone mth2-57b3, complete sequence
          Length = 139216

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                          
Query: 526  gcgtcccagattcggcatgtcttgtcttggttcccagtagcaaatg 571
            |||||||| | || ||||||||||||||| ||||| ||||| ||||
Sbjct: 8523 gcgtcccatactctgcatgtcttgtcttgattcccggtagcgaatg 8478



to top

>emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete genome
          Length = 2799802

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 77      tacaacgatacaacatttattaattt 102
               |||||||||| |||||||||||||||
Sbjct: 2063344 tacaacgatataacatttattaattt 2063369



to top

>gb|AF424783.1| Staphylococcus aureus phage phi 13, complete genome
          Length = 42722

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 77   tacaacgatacaacatttattaattt 102
            |||||||||| |||||||||||||||
Sbjct: 4228 tacaacgatataacatttattaattt 4203



to top

>dbj|BA000017.4| Staphylococcus aureus subsp. aureus Mu50 DNA, complete genome
          Length = 2878529

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 77      tacaacgatacaacatttattaattt 102
               |||||||||| |||||||||||||||
Sbjct: 2121539 tacaacgatataacatttattaattt 2121564



to top

>emb|BX901884.7| Zebrafish DNA sequence from clone DKEY-89E13 in linkage group 4, complete
              sequence
          Length = 137389

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 59     catttgtttatatacacataca 80
              ||||||||||||||||||||||
Sbjct: 109517 catttgtttatatacacataca 109538



to top

>gb|CP000253.1| Staphylococcus aureus subsp. aureus NCTC 8325, complete genome
          Length = 2821361

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 77      tacaacgatacaacatttattaattt 102
               |||||||||| |||||||||||||||
Sbjct: 2070405 tacaacgatataacatttattaattt 2070430



to top

>dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, complete genome, strain:MW2
          Length = 2820462

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 77      tacaacgatacaacatttattaattt 102
               |||||||||| |||||||||||||||
Sbjct: 2084102 tacaacgatataacatttattaattt 2084127



to top

>emb|BX510327.10| Zebrafish DNA sequence from clone CH211-253J24 in linkage group 20,
             complete sequence
          Length = 200187

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 72    acacatacaacgatacaacatttatt 97
             |||||||||| |||||||||||||||
Sbjct: 41672 acacatacaatgatacaacatttatt 41647



to top

>emb|BX323889.13| Zebrafish DNA sequence from clone CH211-14G4 in linkage group 20,
              complete sequence
          Length = 177017

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 72     acacatacaacgatacaacatttatt 97
              |||||||||| |||||||||||||||
Sbjct: 161908 acacatacaatgatacaacatttatt 161933



to top

>gb|AC116708.19| Mus musculus chromosome 1, clone RP23-70F22, complete sequence
          Length = 214263

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 332   tgaaggacatcccagatatctcacca 357
             ||||||| ||||||||||||||||||
Sbjct: 67736 tgaaggaaatcccagatatctcacca 67711



to top

>dbj|AB009866.2| Bacteriophage phi PVL proviral DNA, complete sequence
          Length = 41401

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 77    tacaacgatacaacatttattaattt 102
             |||||||||| |||||||||||||||
Sbjct: 28438 tacaacgatataacatttattaattt 28413



to top

>gb|AY344981.1| Sporisorium lepturi internal transcribed spacer 1, partial
           sequence; 5.8S ribosomal RNA gene, complete sequence;
           and internal transcribed spacer 2, partial sequence
          Length = 673

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 363 gtccagctcttgccttctctt 383
           |||||||||||||||||||||
Sbjct: 555 gtccagctcttgccttctctt 535



to top

>gb|AC110245.10| Mus musculus chromosome 3, clone RP23-251B16, complete sequence
          Length = 241132

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 364   tccagctcttgccttctcttgtagt 388
             ||||||| |||||||||||||||||
Sbjct: 78679 tccagctgttgccttctcttgtagt 78655



to top

>gb|AC144375.14| Medicago truncatula clone mth2-11p13, complete sequence
          Length = 123953

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 84    atacaacatttattaatttgaatta 108
             |||||||||||||||||||| ||||
Sbjct: 93125 atacaacatttattaatttgtatta 93149



to top

>gb|AC006507.21| Mus musculus strain 129S6/SvEvTac clone rp21-580p20 map 10, complete
              sequence
          Length = 185664

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 58     acatttgtttatatacacata 78
              |||||||||||||||||||||
Sbjct: 154296 acatttgtttatatacacata 154276



to top

>gb|AC140851.12| Mus musculus strain C57BL/6J clone rp23-358m4, complete sequence
          Length = 214913

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 58     acatttgtttatatacacata 78
              |||||||||||||||||||||
Sbjct: 141730 acatttgtttatatacacata 141710



to top

>emb|AL929583.5| Human DNA sequence from clone RP13-530G12 on chromosome X, complete
             sequence
          Length = 60146

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 89    acatttattaatttgaattat 109
             |||||||||||||||||||||
Sbjct: 12653 acatttattaatttgaattat 12673



to top

>gb|AC005818.6| Mus musculus strain 129S6/SvEvTac chromosome 10 clone rp21-411d9,
              complete sequence
          Length = 144723

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 58     acatttgtttatatacacata 78
              |||||||||||||||||||||
Sbjct: 100379 acatttgtttatatacacata 100399



to top

>gb|AY084494.1| Arabidopsis thaliana clone 109499 mRNA, complete sequence
          Length = 1597

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 78/97 (80%)
 Strand = Plus / Minus

                                                                        
Query: 477  ggctccaaggttacctttcaatacatggactgctttcgataggttcctcgcgtcccagat 536
            |||||||||||||||||| |  |||  ||||| || ||| || ||||| | |||||| ||
Sbjct: 1257 ggctccaaggttaccttttaggacagcgactgattccgagagtttccttgtgtcccaaat 1198

                                                 
Query: 537  tcggcatgtcttgtcttggttcccagtagcaaatgtt 573
             || || |||||||||||| | || || |||||||||
Sbjct: 1197 acgacaggtcttgtcttggcttcctgtggcaaatgtt 1161



to top

>gb|AY740160.1| Sporisorium lepturi internal transcribed spacer 1, partial
           sequence; 5.8S ribosomal RNA gene and internal
           transcribed spacer 2, complete sequence; and large
           subunit ribosomal RNA gene, partial sequence
          Length = 1351

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 363 gtccagctcttgccttctctt 383
           |||||||||||||||||||||
Sbjct: 603 gtccagctcttgccttctctt 583



to top

>gb|AC006263.1|AC006263 Homo sapiens chromosome 17, clone hCIT.187_K_10, complete sequence
          Length = 94742

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 343   ccagatatctcaccaaagaag 363
             |||||||||||||||||||||
Sbjct: 48132 ccagatatctcaccaaagaag 48112


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,018,455
Number of Sequences: 3902068
Number of extensions: 6018455
Number of successful extensions: 129734
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 129400
Number of HSP's gapped (non-prelim): 311
length of query: 730
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 707
effective length of database: 17,143,297,704
effective search space: 12120311476728
effective search space used: 12120311476728
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)
to top