ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal5e06 |
|---|---|
| Clone Library Name | barley_pub |
>MAD18_ORYSA (Q6Z4G0) MADS-box transcription factor 18 (OsMADS18) (MADS-box| protein 2) (OsMADS2) (MADS-box protein 28) (OsMADS28) (FDRMADS7) Length = 249 Score = 34.7 bits (78), Expect = 0.27 Identities = 29/120 (24%), Positives = 51/120 (42%), Gaps = 6/120 (5%) Frame = -2 Query: 547 EITRRPRPVELAIEAAIQKEREAMQAAIAEKDKEIRELEERTTAL---MEAERARNDASN 377 E+ + +E +++ K+ + + +I+E K+ + L+ + L ME E+ +N+A Sbjct: 124 ELQQLEHQLEYSLKHIRSKKNQLLFESISELQKKEKSLKNQNNVLQKLMETEKEKNNAII 183 Query: 376 RAIYELFVSMCEKNGQVP---PPMPVINVAGTNMSRNASHDPYTVEPSPGQPSPGETSQS 206 E E+NG P P PV + N+ P S QPSP + S Sbjct: 184 NTNRE------EQNGATPSTSSPTPVTAPDPIPTTNNSQSQPRGSGESEAQPSPAQAGNS 237
>IF3A_CAEEL (P34339) Probable eukaryotic translation initiation factor 3 subunit| 10 (eIF-3 theta) (eIF3a) (Egg-laying defective protein 45) Length = 1076 Score = 34.7 bits (78), Expect = 0.27 Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 1/78 (1%) Frame = -2 Query: 547 EITRRPRPVELAIEAAIQKEREAMQAAIAEKDKEIRELEERTTALMEAERAR-NDASNRA 371 E R R E A + +++ +A+QA IAE+ K+ E E ++E +R + ND R Sbjct: 795 EAVRNNRLAERAEDRKKKRKEDAIQAKIAEERKKREEEERARLQVIEGQRRQHNDGRGRR 854 Query: 370 IYELFVSMCEKNGQVPPP 317 E V+M + + + PP Sbjct: 855 EMENSVAMQDNDWRRNPP 872
>TAOK2_MOUSE (Q6ZQ29) Serine/threonine-protein kinase TAO2 (EC 2.7.11.1) (Thousand| and one amino acid protein 2) Length = 1055 Score = 34.3 bits (77), Expect = 0.35 Identities = 29/120 (24%), Positives = 48/120 (40%), Gaps = 1/120 (0%) Frame = -2 Query: 547 EITRRPRPVELAIEAAIQKEREAMQAAIAEKDKEIRELEERTTALMEAERARNDASNRAI 368 E+ +R +E +++E A+Q +E+ + + E + R +AE R S+ A+ Sbjct: 868 ELEQRVALRRALLEQRVEEELLALQTGRSERIRSLLERQAREIEAFDAESMRLGFSSMAL 927 Query: 367 YELFVSMCEKNGQVPPPMPVINVAGTNMS-RNASHDPYTVEPSPGQPSPGETSQSHRASP 191 + + PPP P S + SH P P PG P P + A P Sbjct: 928 GGIPAEAAAQGYPAPPPAPAWPSRPVPRSGAHWSHGP----PPPGMPPPAWRQPALLAPP 983
>IF2_BRUSU (Q8FXT2) Translation initiation factor IF-2| Length = 959 Score = 34.3 bits (77), Expect = 0.35 Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 3/59 (5%) Frame = -2 Query: 538 RRPRPVE---LAIEAAIQKEREAMQAAIAEKDKEIRELEERTTALMEAERARNDASNRA 371 +RPRP + + + + E +A + A+ E +IRE+EER A+ EA+R + + RA Sbjct: 136 QRPRPADRSGMVLNTLSRSEMDARRRALEEA--QIREVEERARAVEEAKRRAEEDARRA 192
>IF2_BRUME (Q8YEB3) Translation initiation factor IF-2| Length = 959 Score = 34.3 bits (77), Expect = 0.35 Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 3/59 (5%) Frame = -2 Query: 538 RRPRPVE---LAIEAAIQKEREAMQAAIAEKDKEIRELEERTTALMEAERARNDASNRA 371 +RPRP + + + + E +A + A+ E +IRE+EER A+ EA+R + + RA Sbjct: 136 QRPRPADRSGMVLNTLSRSEMDARRRALEEA--QIREVEERARAVEEAKRRAEEDARRA 192
>IF2_BRUAB (Q57AA0) Translation initiation factor IF-2| Length = 959 Score = 34.3 bits (77), Expect = 0.35 Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 3/59 (5%) Frame = -2 Query: 538 RRPRPVE---LAIEAAIQKEREAMQAAIAEKDKEIRELEERTTALMEAERARNDASNRA 371 +RPRP + + + + E +A + A+ E +IRE+EER A+ EA+R + + RA Sbjct: 136 QRPRPADRSGMVLNTLSRSEMDARRRALEEA--QIREVEERARAVEEAKRRAEEDARRA 192
>IF2_BRUA2 (Q2YQR7) Translation initiation factor IF-2| Length = 959 Score = 34.3 bits (77), Expect = 0.35 Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 3/59 (5%) Frame = -2 Query: 538 RRPRPVE---LAIEAAIQKEREAMQAAIAEKDKEIRELEERTTALMEAERARNDASNRA 371 +RPRP + + + + E +A + A+ E +IRE+EER A+ EA+R + + RA Sbjct: 136 QRPRPADRSGMVLNTLSRSEMDARRRALEEA--QIREVEERARAVEEAKRRAEEDARRA 192
>ATG11_PICAN (Q67C55) Autophagy-related protein 11 (Peroxisome degradation| deficient protein 18) Length = 1299 Score = 33.5 bits (75), Expect = 0.59 Identities = 22/70 (31%), Positives = 34/70 (48%) Frame = -2 Query: 547 EITRRPRPVELAIEAAIQKEREAMQAAIAEKDKEIRELEERTTALMEAERARNDASNRAI 368 EI + +LA ++KE E +Q A EKDK + LEE L E+ +++ Sbjct: 839 EIEELKKGTDLAELDRLKKEIEDLQKADMEKDKRLAALEEENKNLKESNEELTNSNKE-- 896 Query: 367 YELFVSMCEK 338 V+MCE+ Sbjct: 897 ---LVNMCEE 903
>CWC25_NEUCR (Q7SI59) Pre-mRNA-splicing factor cwc-25| Length = 444 Score = 32.7 bits (73), Expect = 1.0 Identities = 20/41 (48%), Positives = 24/41 (58%) Frame = -2 Query: 493 KEREAMQAAIAEKDKEIRELEERTTALMEAERARNDASNRA 371 K+ AMQAA + DK EER AL EAERA +A +A Sbjct: 372 KKLAAMQAAATDLDKA---REERLKALAEAERAEREADEKA 409
>MYSP_MYTGA (O96064) Paramyosin| Length = 864 Score = 32.7 bits (73), Expect = 1.0 Identities = 37/133 (27%), Positives = 56/133 (42%), Gaps = 3/133 (2%) Frame = -2 Query: 586 LRQIKARQASSCPEITRRPRPVELAIEAAIQKEREAMQAAIAEKDKEI---RELEERTTA 416 L+QIK+ Q R R +EL +E A ++ + + K I +ELE+ + Sbjct: 566 LKQIKSLQ--------NRNRELELQLEEATRQLDDTRNQLSVSERKRITIQQELEDARSL 617 Query: 415 LMEAERARNDASNRAIYELFVSMCEKNGQVPPPMPVINVAGTNMSRNASHDPYTVEPSPG 236 L AERAR +A N + E+ V + E QV A TN R D ++ Sbjct: 618 LEHAERARKNAENE-LGEVTVRLTEVQLQV--------TALTNDKRRMEADIAAMQSDLD 668 Query: 235 QPSPGETSQSHRA 197 G+ + RA Sbjct: 669 DALNGQRAAEERA 681
>LRC59_RAT (Q5RJR8) Leucine-rich repeat-containing protein 59 (Protein p34)| Length = 307 Score = 32.0 bits (71), Expect = 1.7 Identities = 24/67 (35%), Positives = 35/67 (52%) Frame = -2 Query: 586 LRQIKARQASSCPEITRRPRPVELAIEAAIQKEREAMQAAIAEKDKEIRELEERTTALME 407 L+ +KA QA E RR L +E +K+REA Q A K++E+R+ E+ E Sbjct: 145 LQHMKAVQADQERERQRR-----LEVEREAEKKREAKQQAKEAKERELRKREKAE----E 195 Query: 406 AERARND 386 ER R + Sbjct: 196 KERRRKE 202
>LRC59_MOUSE (Q922Q8) Leucine-rich repeat-containing protein 59| Length = 307 Score = 32.0 bits (71), Expect = 1.7 Identities = 24/67 (35%), Positives = 35/67 (52%) Frame = -2 Query: 586 LRQIKARQASSCPEITRRPRPVELAIEAAIQKEREAMQAAIAEKDKEIRELEERTTALME 407 L+ +KA QA E RR L +E +K+REA Q A K++E+R+ E+ E Sbjct: 145 LQHMKAVQADQERERQRR-----LEVEREAEKKREAKQQAKEAKERELRKREKAE----E 195 Query: 406 AERARND 386 ER R + Sbjct: 196 KERRRKE 202
>PCDH7_HUMAN (O60245) Protocadherin-7 precursor (Brain-heart protocadherin)| (BH-Pcdh) Length = 1069 Score = 32.0 bits (71), Expect = 1.7 Identities = 21/96 (21%), Positives = 45/96 (46%), Gaps = 1/96 (1%) Frame = -2 Query: 532 PRPVELAIEAAIQKER-EAMQAAIAEKDKEIRELEERTTALMEAERARNDASNRAIYELF 356 P ++ + + +E+ + + + KDK I L+ TT +++ +ND + + ++F Sbjct: 586 PDSGDILVNTVLDREQTDRYEFKVNAKDKGIPVLQGSTTVIVQVAD-KNDNDPKFMQDVF 644 Query: 355 VSMCEKNGQVPPPMPVINVAGTNMSRNASHDPYTVE 248 ++N Q P+ ++ V + RNA Y E Sbjct: 645 TFYVKENLQPNSPVGMVTVMDADKGRNAEMSLYIEE 680
>ANX11_HUMAN (P50995) Annexin A11 (Annexin XI) (Calcyclin-associated annexin 50)| (CAP-50) (56 kDa autoantigen) Length = 505 Score = 32.0 bits (71), Expect = 1.7 Identities = 19/48 (39%), Positives = 20/48 (41%) Frame = -2 Query: 334 GQVPPPMPVINVAGTNMSRNASHDPYTVEPSPGQPSPGETSQSHRASP 191 G PPP G SR S+ PY P PGQP P Q A P Sbjct: 104 GMYPPP------GGNPPSRMPSYPPYPGAPVPGQPMPPPGQQPPGAYP 145
>MOSA_MAIZE (P15268) Autonomous transposable element EN-1 mosaic protein| (Suppressor-mutator system protein) (SPM) Length = 621 Score = 31.6 bits (70), Expect = 2.3 Identities = 21/72 (29%), Positives = 38/72 (52%) Frame = -2 Query: 652 AGNGRHHGSIAIGDGLIRCPSTLRQIKARQASSCPEITRRPRPVELAIEAAIQKEREAMQ 473 AG G HG +AIGDG++ S R+ S+ P RRP A E + ++ M+ Sbjct: 407 AGGGVPHGRLAIGDGVVPRRSYTRRSNFSAGSNRP---RRPS----AREGELLEKMTQME 459 Query: 472 AAIAEKDKEIRE 437 ++A+ +++++ Sbjct: 460 ESMAQYKQQVQQ 471
>TNNT_DROME (P19351) Troponin T, skeletal muscle (Protein upheld) (Protein| intended thorax) Length = 397 Score = 31.6 bits (70), Expect = 2.3 Identities = 20/65 (30%), Positives = 37/65 (56%) Frame = -2 Query: 586 LRQIKARQASSCPEITRRPRPVELAIEAAIQKEREAMQAAIAEKDKEIRELEERTTALME 407 L+++K +QA ++TR ++A ++ER +A ++K+ RE+EE+ L E Sbjct: 71 LKKLKEKQAKR--KVTRAEEEQKMAQRKKEEEERRVREA----EEKKQREIEEKRMRLEE 124 Query: 406 AERAR 392 AE+ R Sbjct: 125 AEKKR 129
>REPB_AGRRH (P05683) Putative replication protein B| Length = 312 Score = 31.6 bits (70), Expect = 2.3 Identities = 26/99 (26%), Positives = 39/99 (39%) Frame = -2 Query: 496 QKEREAMQAAIAEKDKEIRELEERTTALMEAERARNDASNRAIYELFVSMCEKNGQVPPP 317 +KER+ A +RE +R + E ER A +A+ EL S E + Sbjct: 8 RKERDPATKLTANIGNALREQNDRLSRAEEIERRL--AEGQAVIELDASSIEPSFVQDRM 65 Query: 316 MPVINVAGTNMSRNASHDPYTVEPSPGQPSPGETSQSHR 200 I+ T++ P V P P QP + + HR Sbjct: 66 RGDIDGLLTSIREQGQQVPILVRPHPSQPGRYQVAFGHR 104
>DPOD3_MOUSE (Q9EQ28) DNA polymerase delta subunit 3 (DNA polymerase delta| subunit p66) Length = 462 Score = 31.6 bits (70), Expect = 2.3 Identities = 24/100 (24%), Positives = 41/100 (41%), Gaps = 1/100 (1%) Frame = -2 Query: 496 QKEREAMQAAIAEKDKEIRELEERTTALMEAERARNDASNRAIYELFVSMCEKNGQVPPP 317 QKE+ + + D+E +E E + ++D+S ++E M E + PPP Sbjct: 293 QKEKSSRGKRVDLSDEEAKETEHLKKKRRRIKLPQSDSSEDEVFEDSPEMYEADSPSPPP 352 Query: 316 MPVINVAGTNMSRNASHDPY-TVEPSPGQPSPGETSQSHR 200 + + DP EP P + S GET + + Sbjct: 353 V------------SPPPDPMPKTEPPPVKRSSGETKRRRK 380
>TRHY_HUMAN (Q07283) Trichohyalin| Length = 1898 Score = 31.6 bits (70), Expect = 2.3 Identities = 20/69 (28%), Positives = 36/69 (52%) Frame = -2 Query: 568 RQASSCPEITRRPRPVELAIEAAIQKEREAMQAAIAEKDKEIRELEERTTALMEAERARN 389 RQ + ++ R+ R ++ E ++ ERE Q E+D++ RE EE+ E ++ R+ Sbjct: 1687 RQETEQEQLRRQERYRKILEEEQLRPEREEQQLRRQERDRKFRE-EEQLRQGREEQQLRS 1745 Query: 388 DASNRAIYE 362 S+R E Sbjct: 1746 QESDRKFRE 1754
>IF2_SILPO (Q5LWL4) Translation initiation factor IF-2| Length = 835 Score = 31.2 bits (69), Expect = 2.9 Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 1/73 (1%) Frame = -2 Query: 586 LRQIKARQASSCPEITRRPRPVELAIEAAIQKEREAMQAAIAEKDKEIRELEERT-TALM 410 L +KA +A E +R A E A +ERE +A K++E RE E+R Sbjct: 78 LNALKAAKARESEEAAQRE-----AEEKARAEERERRRAEQEAKEREQREAEQRAREKAE 132 Query: 409 EAERARNDASNRA 371 E ER R +A A Sbjct: 133 EEERQRREAEEEA 145
>HPBP1_HUMAN (Q9NZL4) Hsp70-binding protein 1 (HspBP1) (Heat shock| protein-binding protein 1) (Hsp70-interacting protein 1) (Hsp70-binding protein 2) (HspBP2) (Hsp70-interacting protein 2) Length = 362 Score = 31.2 bits (69), Expect = 2.9 Identities = 30/111 (27%), Positives = 44/111 (39%), Gaps = 8/111 (7%) Frame = -2 Query: 649 GNGRHHGSIAIGDGLIRCPSTLRQIKARQASSCPEITRRPRPVELAIEAAIQKEREAMQA 470 G G GS A G G R P L+ + ++ E P E E Q +EAM A Sbjct: 27 GGGGGGGSSAGGSGNSRPPRNLQGLLQMAITAGSE--EPDPPPEPMSEERRQWLQEAMSA 84 Query: 469 AIAEKDKEIRELEERTTALM--------EAERARNDASNRAIYELFVSMCE 341 A + +E+ +++ L EAE+A + EL +CE Sbjct: 85 AFRGQREEVEQMKSCLRVLSQPMPPTAGEAEQAADQQEREGALELLADLCE 135
>SPAA_STRDO (P21979) Cell surface antigen I/II precursor| Length = 1528 Score = 31.2 bits (69), Expect = 2.9 Identities = 25/114 (21%), Positives = 42/114 (36%) Frame = -2 Query: 538 RRPRPVELAIEAAIQKEREAMQAAIAEKDKEIRELEERTTALMEAERARNDASNRAIYEL 359 R+PRP+ A A QK+ A+Q A ++ +E +A N A+ +A E Sbjct: 211 RKPRPIYEAKLAQNQKDLAAIQQANSDSQAAYAAAKEAYDKEWARVQAANAAAKKAYEEA 270 Query: 358 FVSMCEKNGQVPPPMPVINVAGTNMSRNASHDPYTVEPSPGQPSPGETSQSHRA 197 + KN Q+ + I A Y + + Q ++A Sbjct: 271 LAANTAKNDQIKAEIEAIQQRSAKADYEAKLAQYEKDLAAAQAGNAANEADYQA 324
>MYSP_DIRIM (P13392) Paramyosin (Fragment)| Length = 848 Score = 31.2 bits (69), Expect = 2.9 Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 20/90 (22%) Frame = -2 Query: 580 QIKARQASSCPEITRRPRPVELAIEA--AIQKEREAMQ-------AAIAEKDKEIRELE- 431 Q +AR A + E+ + E AIE A+ +E + +Q A+A+ ++++ EL+ Sbjct: 376 QREARAALA--ELQKMKNLYEKAIEQKEALARENKKLQDDLHEAKEALADANRKLHELDL 433 Query: 430 ----------ERTTALMEAERARNDASNRA 371 E TAL E+E AR DA NRA Sbjct: 434 ENARLAGEIRELQTALKESEAARRDAENRA 463
>FTSKL_DEIRA (Q9RXB5) Hypothetical ftsK-like protein DR0400| Length = 980 Score = 30.8 bits (68), Expect = 3.8 Identities = 18/51 (35%), Positives = 26/51 (50%) Frame = -2 Query: 325 PPPMPVINVAGTNMSRNASHDPYTVEPSPGQPSPGETSQSHRASP*LRLPS 173 P P+PV + S + SH EP+ G+P+P + S R + L LPS Sbjct: 458 PSPVPV-----SPASASVSHAAPWEEPAAGRPAPAPSGVSRRGATRLALPS 503
>MYSP_BRUMA (Q01202) Paramyosin| Length = 880 Score = 30.8 bits (68), Expect = 3.8 Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 11/54 (20%) Frame = -2 Query: 499 IQKEREAMQAAIAEKDKEIRELE-----------ERTTALMEAERARNDASNRA 371 +Q + + A+A+ ++++ EL+ E TAL E+E AR DA NRA Sbjct: 437 LQDDLHEAKEALADANRKLHELDLENARLAGEIRELQTALKESEAARRDAENRA 490
>SPKD_SYNY3 (P54735) Serine/threonine-protein kinase D (EC 2.7.11.1)| Length = 505 Score = 30.8 bits (68), Expect = 3.8 Identities = 31/104 (29%), Positives = 39/104 (37%), Gaps = 6/104 (5%) Frame = -2 Query: 547 EITRRPRPVELAIEAAIQKEREAMQAAIAEKDKEIREL------EERTTALMEAERARND 386 E R E + A QK EA Q IAE +K REL EER EAERA+ + Sbjct: 354 EAEARAAQAEKEKQEAEQKRIEAEQK-IAENEKRQRELEQKRVEEERQRLAAEAERAKQE 412 Query: 385 ASNRAIYELFVSMCEKNGQVPPPMPVINVAGTNMSRNASHDPYT 254 A V + + + G S+N P T Sbjct: 413 RQRLAAERQRVQVLANQAKAMASGASATIGGIPGSKNIRSGPGT 456
>MYSP_ONCVO (Q02171) Paramyosin| Length = 879 Score = 30.8 bits (68), Expect = 3.8 Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 11/54 (20%) Frame = -2 Query: 499 IQKEREAMQAAIAEKDKEIRELE-----------ERTTALMEAERARNDASNRA 371 +Q + + A+A+ ++++ EL+ E TAL E+E AR DA NRA Sbjct: 437 LQDDLHEAKEALADANRKLHELDLENARLAGEIRELQTALKESEAARRDAENRA 490
>YQIK_ECOLI (P77306) Inner membrane protein yqiK| Length = 553 Score = 30.8 bits (68), Expect = 3.8 Identities = 24/55 (43%), Positives = 28/55 (50%), Gaps = 4/55 (7%) Frame = -2 Query: 529 RPVELAIEAAIQKEREAMQAAIAEKDKEIRELEERT----TALMEAERARNDASN 377 + VEL + A +KE MQAA I EL E T A EA+RA NDA N Sbjct: 392 KAVELTVRAKAEKEAAEMQAA------AIVELAEATRKKGLAEAEAQRALNDAIN 440
>GLT_DROME (P33438) Glutactin precursor| Length = 1026 Score = 30.8 bits (68), Expect = 3.8 Identities = 28/102 (27%), Positives = 40/102 (39%), Gaps = 3/102 (2%) Frame = -2 Query: 583 RQIKARQASSCPEITRRPRPVELAIEAAIQKEREAMQAAIAEKDKEIRELEERTTALMEA 404 R+ + R P+ R + E + Q+ER Q E+ ++ RELEER E Sbjct: 665 REQQLRDQQRYPQQEPREQQDERIRQQREQEERLRQQREQEERLRQQRELEERIRQQQER 724 Query: 403 ---ERARNDASNRAIYELFVSMCEKNGQVPPPMPVINVAGTN 287 ER + + R EL E+ Q P P N N Sbjct: 725 EQYEREQQEREQREREELERQQREREQQQPEQQPEYNPEPVN 766
>E2AK1_HUMAN (Q9BQI3) Eukaryotic translation initiation factor 2-alpha kinase 1| (EC 2.7.11.1) (Heme-regulated eukaryotic initiation factor eIF-2-alpha kinase) (Heme-regulated inhibitor) (Heme-controlled repressor) (HCR) (Hemin-sensitive initiation factor Length = 630 Score = 30.8 bits (68), Expect = 3.8 Identities = 26/108 (24%), Positives = 44/108 (40%), Gaps = 8/108 (7%) Frame = -2 Query: 667 ELVMIAGNGRHHGSIAIGDGLIRCPSTLRQIKARQASSCPEITRR-----PRPVELAIEA 503 EL G + G + P +LR+ QA +TRR P ++L Sbjct: 522 ELFQPFGTEMERAEVLTGLRTGQLPESLRKRCPVQAKYIQHLTRRNSSQRPSAIQLLQSE 581 Query: 502 AIQKEREA---MQAAIAEKDKEIRELEERTTALMEAERARNDASNRAI 368 Q +Q I E++KEI EL+++ L + + R+D + + Sbjct: 582 LFQNSGNVNLTLQMKIIEQEKEIAELKKQLNLLSQDKGVRDDGKDGGV 629
>Y234_MYCPN (P75537) Hypothetical protein MPN234 (G07_orf417)| Length = 417 Score = 30.8 bits (68), Expect = 3.8 Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 4/83 (4%) Frame = -2 Query: 622 AIGDGLIRCPSTLRQIKARQASSCPEITRRPRPVELAIEAAIQKEREAMQAAIAEKDKEI 443 A+G+ +I+ +Q+ Q+ P + + I A KER QAA+A+ KEI Sbjct: 71 ALGENIIQ-----KQVSLTQSIIKPRLEAAKTQYKQDIIAPFAKER---QAALAQHLKEI 122 Query: 442 RELEERTTALM----EAERARND 386 E ++R L+ EAE+ R + Sbjct: 123 EEAKQRAEQLLKEQQEAEKRRQE 145
>IF2_RHOPA (Q6NCN5) Translation initiation factor IF-2| Length = 883 Score = 30.8 bits (68), Expect = 3.8 Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 19/74 (25%) Frame = -2 Query: 562 ASSCPEITRRPRPVELA-------------------IEAAIQKEREAMQAAIAEKDKEIR 440 A + PE+ ++P P A + + ER A A+A D +R Sbjct: 59 APAAPEVAKKPAPAPAAPPRQQQSRPAPQQSRSGMVLRTLTEDERTARATALA--DARVR 116 Query: 439 ELEERTTALMEAER 398 E+EER A +EA+R Sbjct: 117 EIEERKQAEIEAQR 130
>LRC59_HUMAN (Q96AG4) Leucine-rich repeat-containing protein 59| Length = 307 Score = 30.4 bits (67), Expect = 5.0 Identities = 23/67 (34%), Positives = 35/67 (52%) Frame = -2 Query: 586 LRQIKARQASSCPEITRRPRPVELAIEAAIQKEREAMQAAIAEKDKEIRELEERTTALME 407 L+ +KA QA E RR L +E +K+REA Q A +++E+R+ E+ E Sbjct: 145 LQHMKAVQADQERERQRR-----LEVEREAEKKREAKQRAKEAQERELRKREKAE----E 195 Query: 406 AERARND 386 ER R + Sbjct: 196 KERRRKE 202
>FRQ_NEUCR (P19970) Frequency clock protein| Length = 989 Score = 30.4 bits (67), Expect = 5.0 Identities = 20/108 (18%), Positives = 51/108 (47%), Gaps = 1/108 (0%) Frame = -2 Query: 547 EITRRPRPVELAIEAAIQKEREAMQAAIAEKDKEIRELEERTTALMEAERARNDASNRAI 368 ++ R+ + E+ + ++++ ++A + + + + E T+ +R + A+ Sbjct: 178 DVMRKEKLFEIKVHGLPRRKKRELEATLRDFAASLGDSSESTS-----QRRKTGRHGTAV 232 Query: 367 YELFVSMCEKNGQVPPPMPVINVAGTNMSRN-ASHDPYTVEPSPGQPS 227 + VS+ + + ++ A +MS +SH P++ PS G+PS Sbjct: 233 HSSGVSLSKHDSSSSSRSRPVDSAYNSMSTGRSSHAPHSSGPSLGRPS 280
>IF2_BRAJA (Q89WA9) Translation initiation factor IF-2| Length = 902 Score = 30.4 bits (67), Expect = 5.0 Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 20/80 (25%) Frame = -2 Query: 550 PEITRRPRPVELA-------------------IEAAIQKEREAMQAAIAEKDKEIRELEE 428 PE+T +P P A + + ER A +A+A D ++RE+EE Sbjct: 61 PEVTAKPAPAAPAPSRPAPPPAPPRNAGSGVVLRTLTEDERSARASALA--DAKLREVEE 118 Query: 427 RTTALMEAE-RARNDASNRA 371 R A EA+ RA +A+ RA Sbjct: 119 RRQAEEEAQRRAVREAAERA 138
>BSN_RAT (O88778) Bassoon protein| Length = 3937 Score = 30.4 bits (67), Expect = 5.0 Identities = 28/116 (24%), Positives = 50/116 (43%), Gaps = 6/116 (5%) Frame = -2 Query: 520 ELAIEAAIQKEREAMQAAIAEKDKEIRELEERTTALMEAERARNDASNRAIYELFVSMCE 341 E + A+Q+E+ A Q E +I++L+++ +E ++ R A F + CE Sbjct: 2426 ERQAQFALQREQLAQQRLQLE---QIQQLQQQLQQQLEEQKQRQKAP-------FPATCE 2475 Query: 340 KNGQVPPPMPVINVAGTNMSRNASHDPYTVEPS----PGQPSPGETSQS--HRASP 191 + PPP A T +++N + P + G PG+ + HR P Sbjct: 2476 APSRGPPP------AATELAQNGQYWPPLTHTAFIAVAGTEGPGQAREPVLHRGLP 2525
>VGLM_NYV (Q83887) Envelope polyprotein precursor [Contains: Glycoprotein 1| (G1); Glycoprotein 2 (G2)] Length = 1140 Score = 30.4 bits (67), Expect = 5.0 Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 13/63 (20%) Frame = -1 Query: 206 PPCFTLT*ITFTSREAWLMEC-------------LKMISCTMGCIETIVVYEYMKLCEYG 66 P C T+T T ++ +A C LK GC T+ V+ Y C G Sbjct: 575 PYCMTMTESTESALQAHFSICKLTNRFQENLKKSLKRPEVKQGCYRTLGVFRYKSRCYVG 634 Query: 65 MVW 57 +VW Sbjct: 635 LVW 637
>PROP_PONPY (Q5RBP8) Properdin precursor (Factor P)| Length = 469 Score = 30.4 bits (67), Expect = 5.0 Identities = 20/82 (24%), Positives = 31/82 (37%), Gaps = 10/82 (12%) Frame = +2 Query: 368 YGPVRRIIPCP--------LRLHQCSRPXXXXXXXXXXXRYSRLHCLSLFLNSSLDGELD 523 +GP + PCP + C P +R H + + +DGE D Sbjct: 260 WGPWGPVSPCPVTCGLGQTMEQRTCDHPVPQHGGPFCAGDATRTHICNTAVPCPVDGEWD 319 Query: 524 -W-PWTTCYLRTRARLACLYLP 583 W W+TC R ++C +P Sbjct: 320 SWGEWSTCVRRNMKSISCQEIP 341
>MYH13_HUMAN (Q9UKX3) Myosin-13 (Myosin heavy chain, skeletal muscle, extraocular)| (MyHC-eo) Length = 1938 Score = 30.4 bits (67), Expect = 5.0 Identities = 18/83 (21%), Positives = 39/83 (46%) Frame = -2 Query: 574 KARQASSCPEITRRPRPVELAIEAAIQKEREAMQAAIAEKDKEIRELEERTTALMEAERA 395 K C + R +EL + ++KE+ A + + +E+ LEE + L + +++ Sbjct: 944 KRNLEDKCSSLKRDIDDLELTL-TKVEKEKHATENKVKNLSEEMTALEENISKLTKEKKS 1002 Query: 394 RNDASNRAIYELFVSMCEKNGQV 326 +A + + +L V + NG + Sbjct: 1003 LQEAHQQTLDDLQVEEDKVNGLI 1025
>MYH8_MOUSE (P13542) Myosin-8 (Myosin heavy chain, skeletal muscle, perinatal)| (MyHC-perinatal) Length = 1937 Score = 30.0 bits (66), Expect = 6.6 Identities = 21/63 (33%), Positives = 35/63 (55%) Frame = -2 Query: 520 ELAIEAAIQKEREAMQAAIAEKDKEIRELEERTTALMEAERARNDASNRAIYELFVSMCE 341 E A+E +QK+ + +QA I E ++EI E + +AE+ R+D S R + E+ + E Sbjct: 1100 EQAVEIQLQKKIKELQARIEELEEEI---EAERASRAKAEKQRSDLS-RELEEISERLEE 1155 Query: 340 KNG 332 G Sbjct: 1156 AGG 1158
>P049_PSEAE (Q9I783) Protein PA0049 precursor| Length = 553 Score = 30.0 bits (66), Expect = 6.6 Identities = 12/21 (57%), Positives = 15/21 (71%) Frame = -2 Query: 652 AGNGRHHGSIAIGDGLIRCPS 590 A NGR HGS A DG++ CP+ Sbjct: 308 AWNGRFHGSSAGNDGIVYCPA 328
>BSN_MOUSE (O88737) Bassoon protein| Length = 3941 Score = 30.0 bits (66), Expect = 6.6 Identities = 28/116 (24%), Positives = 50/116 (43%), Gaps = 6/116 (5%) Frame = -2 Query: 520 ELAIEAAIQKEREAMQAAIAEKDKEIRELEERTTALMEAERARNDASNRAIYELFVSMCE 341 E + A+Q+E+ A Q E +I++L+++ +E ++ R A F + CE Sbjct: 2440 ERQAQFALQREQLAQQRLQLE---QIQQLQQQLQLQLEEQKQRQKAP-------FPATCE 2489 Query: 340 KNGQVPPPMPVINVAGTNMSRNASHDPYTVEPS----PGQPSPGETSQS--HRASP 191 + PPP A T +++N + P + G PG+ + HR P Sbjct: 2490 APSRGPPP------AATELAQNGQYWPPLTHAAFIAVAGTEGPGQPREPVLHRGLP 2539
>MPP2_MOUSE (Q9WV34) MAGUK p55 subfamily member 2 (MPP2 protein) (Dlgh2| protein) Length = 552 Score = 30.0 bits (66), Expect = 6.6 Identities = 16/74 (21%), Positives = 35/74 (47%) Frame = -2 Query: 508 EAAIQKEREAMQAAIAEKDKEIRELEERTTALMEAERARNDASNRAIYELFVSMCEKNGQ 329 E ++ R+ + E +++ EL E+++ E R + +++ E S+ K + Sbjct: 57 ETKLEAVRDNNLELVQEILRDLAELAEQSSTAAELARILQEPHFQSLLETHDSVASKTYE 116 Query: 328 VPPPMPVINVAGTN 287 PPP P ++ +N Sbjct: 117 TPPPSPGLDPTFSN 130
>FOSB_CANFA (Q9TUB3) Protein fosB| Length = 338 Score = 30.0 bits (66), Expect = 6.6 Identities = 32/128 (25%), Positives = 55/128 (42%), Gaps = 18/128 (14%) Frame = -2 Query: 538 RRPRPVELAIEAA----IQKEREAMQAA-IAEKDKEIRELEERTTALMEAERARNDASNR 374 RRPR L E +++ER + AA + +E+ + + T +E E+A ++ Sbjct: 143 RRPREETLTPEEEEKRRVRRERNKLAAAKCRNRRRELTDRLQAETDQLEEEKAELESEIA 202 Query: 373 AIYEL-----FVSMCEKNG------QVPPPMPVINVAGTNMSRNASHDPYT--VEPSPGQ 233 + + FV + K G + P P P+ V S + D ++ + P P Sbjct: 203 ELQKEKERLEFVLVAHKPGCKIPYEEGPGPGPLAEVRDLPGSASTKEDGFSWLLPPPPAP 262 Query: 232 PSPGETSQ 209 P P +TSQ Sbjct: 263 PLPFQTSQ 270
>IF3A_HUMAN (Q14152) Eukaryotic translation initiation factor 3 subunit 10| (eIF-3 theta) (eIF3 p167) (eIF3 p180) (eIF3 p185) (eIF3a) Length = 1382 Score = 29.6 bits (65), Expect = 8.6 Identities = 14/41 (34%), Positives = 25/41 (60%) Frame = -2 Query: 514 AIEAAIQKEREAMQAAIAEKDKEIRELEERTTALMEAERAR 392 A E +++ E +A A++++E+RE +ER L E ER + Sbjct: 818 AEEQMLKEREERERAERAKREEELREYQERVKKLEEVERKK 858
>PLEC1_HUMAN (Q15149) Plectin-1 (PLTN) (PCN) (Hemidesmosomal protein 1) (HD1)| Length = 4684 Score = 29.6 bits (65), Expect = 8.6 Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 18/78 (23%) Frame = -2 Query: 553 CPEITRRPRPVELAIEAA---IQKEREAMQAAIAEKDKEIR---------------ELEE 428 C R R V++A+E A + E ++ +A+ AEK ++ E E Sbjct: 1690 CQAEVERARQVQVALETAQRSAEAELQSKRASFAEKTAQLERSLQEEHVAVAQLREEAER 1749 Query: 427 RTTALMEAERARNDASNR 374 R EAERAR +A + Sbjct: 1750 RAQQQAEAERAREEAERQ 1767
>MYH8_HUMAN (P13535) Myosin-8 (Myosin heavy chain, skeletal muscle, perinatal)| (MyHC-perinatal) Length = 1937 Score = 29.6 bits (65), Expect = 8.6 Identities = 15/49 (30%), Positives = 28/49 (57%) Frame = -2 Query: 517 LAIEAAIQKEREAMQAAIAEKDKEIRELEERTTALMEAERARNDASNRA 371 L I+ + + + + IAEKD+EI +L+ T ++E ++ DA R+ Sbjct: 1562 LRIQLELNQVKSEVDRKIAEKDEEIDQLKRNHTRVVETMQSTLDAEIRS 1610
>EP15R_HUMAN (Q9UBC2) Epidermal growth factor receptor substrate 15-like 1| (Eps15-related protein) (Eps15R) Length = 864 Score = 29.6 bits (65), Expect = 8.6 Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 11/55 (20%) Frame = -2 Query: 505 AAIQKEREAMQAAIAEKDKEIR-----------ELEERTTALMEAERARNDASNR 374 A +Q+E+ +++ I EK++ IR +L+ T++L E E + DA +R Sbjct: 394 AQLQREKYSLEQDIREKEEAIRQKTSEVQELQNDLDRETSSLQELEAQKQDAQDR 448
>3BP1_HUMAN (Q9Y3L3) SH3 domain-binding protein 1 (3BP-1)| Length = 701 Score = 29.6 bits (65), Expect = 8.6 Identities = 26/123 (21%), Positives = 44/123 (35%), Gaps = 1/123 (0%) Frame = -2 Query: 589 TLRQIKARQASSCPEITRRPRPVELAIEAAIQKEREAMQAAIAEKDKEIRELEERTTALM 410 T ++ R AS P++TR P +E ++ + A ++ A Sbjct: 534 TESEVPPRPAS--PKVTRSPPETAAPVEDMARRTKRPAPARPTMPPPQVSGSRSSPPAPP 591 Query: 409 EAERARNDASNRAIYELFVSMCEKNGQVPPPMPVINVA-GTNMSRNASHDPYTVEPSPGQ 233 + + + +A+ V + VPPP+P SR + P P P Sbjct: 592 LPPGSGSPGTPQALPRRLVGSSLRAPTVPPPLPPTPPQPARRQSRRSPASPSPASPGPAS 651 Query: 232 PSP 224 PSP Sbjct: 652 PSP 654
>BYN_DROME (P55965) T-related protein (Trp) (Protein brachyenteron)| Length = 697 Score = 29.6 bits (65), Expect = 8.6 Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 6/64 (9%) Frame = -2 Query: 388 DASNRAIYELFVSMCEKNGQ------VPPPMPVINVAGTNMSRNASHDPYTVEPSPGQPS 227 DAS A + S + NG VP PMP+ +G N+S + S P PS S Sbjct: 428 DASPTASVFSYPSSWQSNGNYWNATSVPGPMPMNVCSGRNISSHNSPSPTNGSPSYTTSS 487 Query: 226 PGET 215 P T Sbjct: 488 PSYT 491
>RERE_RAT (Q62901) Arginine-glutamic acid dipeptide repeats protein| (Atrophin-1-related protein) Length = 1559 Score = 29.6 bits (65), Expect = 8.6 Identities = 36/123 (29%), Positives = 52/123 (42%), Gaps = 7/123 (5%) Frame = -2 Query: 538 RRPRPVELAIEAAIQKEREAMQAAIAEKDKEIRELEERTTALMEAERARNDASNRAIYEL 359 +R +E A A QK RE + EK+KE +E E EAERA AS+ A +E Sbjct: 1154 KREEAIEKAKREAEQKAREERER---EKEKE-KEREREREREREAERAAQKASSSA-HEG 1208 Query: 358 FVSMCEKNGQ-------VPPPMPVINVAGTNMSRNASHDPYTVEPSPGQPSPGETSQSHR 200 +S + +G PPP + A+ PY +P + E ++ H Sbjct: 1209 RLSDPQLSGPGHMRPSFEPPPTTI-----------AAVPPYIGPDTPALRTLSEYARPHV 1257 Query: 199 ASP 191 SP Sbjct: 1258 MSP 1260
>FOG2_HUMAN (Q8WW38) Zinc finger protein ZFPM2 (Zinc finger protein multitype 2)| (Friend of GATA protein 2) (FOG-2) (hFOG-2) Length = 1151 Score = 29.6 bits (65), Expect = 8.6 Identities = 17/61 (27%), Positives = 31/61 (50%) Frame = -2 Query: 463 AEKDKEIRELEERTTALMEAERARNDASNRAIYELFVSMCEKNGQVPPPMPVINVAGTNM 284 A + ++ +L+ + E+ER D S YE + CEKNG + P P N+ +++ Sbjct: 881 AHQRNDLGQLDGKVFPNPESERNSPDVS----YERSIIKCEKNGNLKQPSPNGNLFSSHL 936 Query: 283 S 281 + Sbjct: 937 A 937
>AKAP9_HUMAN (Q99996) A-kinase anchor protein 9 (Protein kinase A-anchoring| protein 9) (PRKA9) (A-kinase anchor protein 450 kDa) (AKAP 450) (A-kinase anchor protein 350 kDa) (AKAP 350) (hgAKAP 350) (AKAP 120-like protein) (Hyperion protein) (Yotiao protei Length = 3911 Score = 29.6 bits (65), Expect = 8.6 Identities = 17/45 (37%), Positives = 25/45 (55%) Frame = -2 Query: 520 ELAIEAAIQKEREAMQAAIAEKDKEIRELEERTTALMEAERARND 386 EL++E +Q ER+A I K+KEI LEE+ E +N+ Sbjct: 2196 ELSLEVQLQAERDA----IDRKEKEITNLEEQLEQFREELENKNE 2236
>IF3A_MOUSE (P23116) Eukaryotic translation initiation factor 3 subunit 10| (eIF-3 theta) (eIF3 p167) (eIF3 p180) (eIF3 p185) (eIF3a) (p162 protein) (Centrosomin) Length = 1344 Score = 29.6 bits (65), Expect = 8.6 Identities = 14/41 (34%), Positives = 25/41 (60%) Frame = -2 Query: 514 AIEAAIQKEREAMQAAIAEKDKEIRELEERTTALMEAERAR 392 A E +++ E +A A++++E+RE +ER L E ER + Sbjct: 818 AEEQMLKEREERERAERAKREEELREYQERVKKLEEVERKK 858
>LRC59_CHICK (Q5F334) Leucine-rich repeat-containing protein 59| Length = 339 Score = 29.6 bits (65), Expect = 8.6 Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 5/80 (6%) Frame = -2 Query: 535 RPRPVELAIEAAIQKEREAMQAAIAEKDKEIRELE-----ERTTALMEAERARNDASNRA 371 R R +L E ++K+REA Q A +++E+R+ E ER +A+RA + Sbjct: 190 RERQRKLQAEREMEKKREAEQRAREAQERELRKREKAEEKERRRREYDAQRAAKQEMEKK 249 Query: 370 IYELFVSMCEKNGQVPPPMP 311 + V + PP P Sbjct: 250 TKKETVQTRKLASSSRPPQP 269 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 95,048,504 Number of Sequences: 219361 Number of extensions: 1974358 Number of successful extensions: 7546 Number of sequences better than 10.0: 55 Number of HSP's better than 10.0 without gapping: 6946 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7506 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6484657212 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
