ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal5e02 |
|---|---|
| Clone Library Name | barley_pub |
>NEP1_NEPGR (Q766C3) Aspartic proteinase nepenthesin-1 precursor (EC 3.4.23.-)| (Nepenthesin-I) Length = 437 Score = 62.8 bits (151), Expect = 2e-10 Identities = 29/72 (40%), Positives = 39/72 (54%) Frame = -1 Query: 333 VSVPRMAFHFQGADLELPRRNYVLDDPRRGSLCILLADSGDSGATIGNFVQQDMRVLYDL 154 + +P HF G DLELP NY + P G +C+ + S + GN QQ+M V+YD Sbjct: 364 LQIPTFVMHFDGGDLELPSENYFIS-PSNGLICLAMGSSSQGMSIFGNIQQQNMLVVYDT 422 Query: 153 EAETLSFAPAQC 118 +SFA AQC Sbjct: 423 GNSVVSFASAQC 434
>NEP2_NEPGR (Q766C2) Aspartic proteinase nepenthesin-2 precursor (EC 3.4.23.-)| (Nepenthesin-II) Length = 438 Score = 56.2 bits (134), Expect = 2e-08 Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 1/78 (1%) Frame = -1 Query: 348 SAATVVSVPRMAFHFQGADLELPRRNYVLDDPRRGSLCILLADSGDSGATI-GNFVQQDM 172 S + V VP ++ F G L L +N +L P G +C+ + S G +I GN QQ+ Sbjct: 359 SDGSTVQVPEISMQFDGGVLNLGEQN-ILISPAEGVICLAMGSSSQLGISIFGNIQQQET 417 Query: 171 RVLYDLEAETLSFAPAQC 118 +VLYDL+ +SF P QC Sbjct: 418 QVLYDLQNLAVSFVPTQC 435
>YPS1_YEAST (P32329) Aspartic proteinase 3 precursor (EC 3.4.23.41) (Yapsin-1)| Length = 569 Score = 32.7 bits (73), Expect = 0.23 Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 2/68 (2%) Frame = -1 Query: 318 MAFHFQGADLELPRRNYVLDDPRRGSLCIL--LADSGDSGATIGNFVQQDMRVLYDLEAE 145 + F F G + P +++L G+ C+L + S D+G +G+ + V+YDLE Sbjct: 414 IVFDFGGFHINAPLSSFILST---GTTCLLGIIPTSDDTGTILGDSFLTNAYVVYDLENL 470 Query: 144 TLSFAPAQ 121 +S A A+ Sbjct: 471 EISMAQAR 478
>FOLH1_RAT (P70627) Glutamate carboxypeptidase 2 (EC 3.4.17.21) (Glutamate| carboxypeptidase II) (Membrane glutamate carboxypeptidase) (mGCP) (N-acetylated-alpha-linked acidic dipeptidase I) (NAALADase I) (Pteroylpoly-gamma-glutamate carboxypeptidase) (Fol Length = 752 Score = 30.4 bits (67), Expect = 1.1 Identities = 17/39 (43%), Positives = 22/39 (56%) Frame = -3 Query: 226 GRLRGLGRHDRQLRAAGHARALRFGGGDPVVRSGAVLMH 110 G L+G DR + GH A FGG DP +SGA ++H Sbjct: 362 GTLKGAVEPDRYVILGGHRDAWVFGGIDP--QSGAAVVH 398
>FOLH1_HUMAN (Q04609) Glutamate carboxypeptidase 2 (EC 3.4.17.21) (Glutamate| carboxypeptidase II) (Membrane glutamate carboxypeptidase) (mGCP) (N-acetylated-alpha-linked acidic dipeptidase I) (NAALADase I) (Pteroylpoly-gamma-glutamate carboxypeptidase) (F Length = 750 Score = 30.4 bits (67), Expect = 1.1 Identities = 17/39 (43%), Positives = 22/39 (56%) Frame = -3 Query: 226 GRLRGLGRHDRQLRAAGHARALRFGGGDPVVRSGAVLMH 110 G LRG DR + GH + FGG DP +SGA ++H Sbjct: 360 GTLRGAVEPDRYVILGGHRDSWVFGGIDP--QSGAAVVH 396
>FOLH1_PIG (O77564) Glutamate carboxypeptidase 2 (EC 3.4.17.21) (Glutamate| carboxypeptidase II) (Membrane glutamate carboxypeptidase) (mGCP) (N-acetylated-alpha-linked acidic dipeptidase I) (NAALADase I) (Pteroylpoly-gamma-glutamate carboxypeptidase) (Fol Length = 751 Score = 30.4 bits (67), Expect = 1.1 Identities = 17/39 (43%), Positives = 22/39 (56%) Frame = -3 Query: 226 GRLRGLGRHDRQLRAAGHARALRFGGGDPVVRSGAVLMH 110 G LRG DR + GH + FGG DP +SGA ++H Sbjct: 361 GTLRGAVEPDRYVILGGHRDSWVFGGIDP--QSGAAVVH 397
>FOLH1_MOUSE (O35409) Glutamate carboxypeptidase 2 (EC 3.4.17.21) (Glutamate| carboxypeptidase II) (Membrane glutamate carboxypeptidase) (mGCP) (N-acetylated-alpha-linked acidic dipeptidase I) (NAALADase I) (Pteroylpoly-gamma-glutamate carboxypeptidase) (F Length = 752 Score = 30.0 bits (66), Expect = 1.5 Identities = 17/39 (43%), Positives = 22/39 (56%) Frame = -3 Query: 226 GRLRGLGRHDRQLRAAGHARALRFGGGDPVVRSGAVLMH 110 G L+G DR + GH A FGG DP +SGA ++H Sbjct: 362 GTLKGALEPDRYVILGGHRDAWVFGGIDP--QSGAAVVH 398
>YPS3_YEAST (Q12303) Aspartic proteinase yapsin-3 precursor (EC 3.4.23.-)| Length = 508 Score = 29.6 bits (65), Expect = 1.9 Identities = 15/66 (22%), Positives = 34/66 (51%) Frame = -1 Query: 318 MAFHFQGADLELPRRNYVLDDPRRGSLCILLADSGDSGATIGNFVQQDMRVLYDLEAETL 139 +AF F G + P ++ + + ++ +G++ A +G+ ++ V+YDL+ + Sbjct: 332 VAFDFGGFRINAPLSDFTMQTSVGTCVLAIIPQAGNATAILGDSFLRNAYVVYDLDNYEI 391 Query: 138 SFAPAQ 121 S A A+ Sbjct: 392 SLAQAK 397
>CSKI2_XENLA (Q6DD51) Caskin-2| Length = 1205 Score = 29.6 bits (65), Expect = 1.9 Identities = 13/29 (44%), Positives = 16/29 (55%) Frame = -1 Query: 354 GASAATVVSVPRMAFHFQGADLELPRRNY 268 G S + S P + H QG DL LP RN+ Sbjct: 682 GHSQESASSYPVLPVHLQGVDLNLPERNH 710
>BAR1_YEAST (P12630) Barrierpepsin precursor (EC 3.4.23.35) (Extracellular| "barrier" protein) (BAR proteinase) Length = 587 Score = 29.3 bits (64), Expect = 2.5 Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 2/72 (2%) Frame = -1 Query: 333 VSVPRMAFHFQGADLEL--PRRNYVLDDPRRGSLCILLADSGDSGATIGNFVQQDMRVLY 160 VSV + ++F DL++ P + +L GS C + +G+ V++ Sbjct: 324 VSVGDVEYNFDFGDLQISVPLSSLILSPETEGSYCGFAVQPTNDSMVLGDVFLSSAYVVF 383 Query: 159 DLEAETLSFAPA 124 DL+ +S A A Sbjct: 384 DLDNYKISLAQA 395
>ASP1_ORYSA (Q6YNY7) Aspartic proteinase Asp1 precursor (EC 3.4.23.-) (OsAsp1)| (Nucellin-like protein) Length = 410 Score = 29.3 bits (64), Expect = 2.5 Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 6/66 (9%) Frame = -1 Query: 297 ADLELPRRNYVLDDPRRGSLCILLADSGDSGAT------IGNFVQQDMRVLYDLEAETLS 136 A LE+P +Y++ + G +C+ + D + IG D V+YD E L Sbjct: 332 ATLEIPPEHYLIIS-QEGHVCLGILDGSKEHPSLAGTNLIGGITMLDQMVIYDSERSLLG 390 Query: 135 FAPAQC 118 + QC Sbjct: 391 WVNYQC 396
>ERA_PSESM (Q87XG2) GTP-binding protein era homolog| Length = 300 Score = 28.9 bits (63), Expect = 3.3 Identities = 21/66 (31%), Positives = 30/66 (45%) Frame = -1 Query: 354 GASAATVVSVPRMAFHFQGADLELPRRNYVLDDPRRGSLCILLADSGDSGATIGNFVQQD 175 GA ++V F QG L + V R G I++ D GD IG+ ++D Sbjct: 208 GAELPYQITVEIEEFKQQGRTLHIHALILV---ERDGQKKIIIGDKGDRIKRIGSDARRD 264 Query: 174 MRVLYD 157 M VL+D Sbjct: 265 MEVLFD 270
>PEPB_CANFA (Q8SQ41) Pepsin B precursor (EC 3.4.23.2)| Length = 390 Score = 28.5 bits (62), Expect = 4.3 Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 4/74 (5%) Frame = -1 Query: 339 TVVSVPRMAFHFQGADLELPRRNYVLDDPRRGSLCI----LLADSGDSGATIGNFVQQDM 172 ++ S+P + F G+ L LP YVL++ +L I L + +G +G+ ++ Sbjct: 314 SIQSMPTITFVISGSPLPLPPSTYVLNNNGYCTLGIEVTYLPSPNGQPLWILGDVFLREY 373 Query: 171 RVLYDLEAETLSFA 130 ++D+ A + FA Sbjct: 374 YTVFDMAANRVGFA 387
>DME_ARATH (Q8LK56) Transcriptional activator DEMETER (DNA glycosylase-related| protein DME) Length = 1729 Score = 28.1 bits (61), Expect = 5.6 Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 1/38 (2%) Frame = -1 Query: 177 DMRVLYDLEAETLSFAPAQC*CIRPTC-MCVSKKERRH 67 D R LY+L + ++F C RP C C + E RH Sbjct: 1352 DQRTLYELHYQLITFGKVFCTKSRPNCNACPMRGECRH 1389
>XYLB_KLEPN (P29444) Xylulose kinase (EC 2.7.1.17) (Xylulokinase)| Length = 483 Score = 28.1 bits (61), Expect = 5.6 Identities = 15/43 (34%), Positives = 20/43 (46%) Frame = +1 Query: 169 AHVLLHEVADRGARVPGVGQEDAQAPPPRVVQDVVPARQFEVR 297 AHV +H+ ADR + + E A P R V P R+ R Sbjct: 431 AHVAVHDEADRPGLLKPLPLEQAHRPDDRRVAHYAPQREIFAR 473
>V018_FOWPV (Q9J5I3) Putative ankyrin repeat protein FPV018| Length = 700 Score = 28.1 bits (61), Expect = 5.6 Identities = 13/23 (56%), Positives = 17/23 (73%) Frame = -1 Query: 300 GADLELPRRNYVLDDPRRGSLCI 232 GADL++ R+YVLD + GS CI Sbjct: 150 GADLKMVCRSYVLDFYKGGSYCI 172
>MOAA1_PSEAE (Q9HXD6) Molybdenum cofactor biosynthesis protein A 1| Length = 329 Score = 27.7 bits (60), Expect = 7.3 Identities = 13/25 (52%), Positives = 16/25 (64%) Frame = -3 Query: 193 QLRAAGHARALRFGGGDPVVRSGAV 119 +L AG R LR GG+P+VR G V Sbjct: 54 RLFVAGGVRKLRLTGGEPLVRPGIV 78
>META_BACFR (Q64YS9) Homoserine O-succinyltransferase (EC 2.3.1.46) (Homoserine| O-transsuccinylase) (HTS) Length = 305 Score = 27.7 bits (60), Expect = 7.3 Identities = 11/22 (50%), Positives = 15/22 (68%) Frame = -1 Query: 303 QGADLELPRRNYVLDDPRRGSL 238 +G +E+PR YV DDP +G L Sbjct: 253 KGLPIEIPRNYYVNDDPDKGPL 274
>ERA_PSEAE (Q9XCX8) GTP-binding protein era homolog| Length = 305 Score = 27.7 bits (60), Expect = 7.3 Identities = 12/32 (37%), Positives = 19/32 (59%) Frame = -1 Query: 252 RRGSLCILLADSGDSGATIGNFVQQDMRVLYD 157 R G I++ D G+ +IG ++DM VL+D Sbjct: 244 REGQKKIIIGDKGERIKSIGQNARKDMEVLFD 275
>CARP1_CANPA (P32951) Candidapepsin-1 precursor (EC 3.4.23.24) (Aspartate| protease 1) (ACP 1) Length = 402 Score = 27.3 bits (59), Expect = 9.5 Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 1/62 (1%) Frame = -1 Query: 312 FHF-QGADLELPRRNYVLDDPRRGSLCILLADSGDSGATIGNFVQQDMRVLYDLEAETLS 136 F+F GA + +P YV + C+ D NF++ +LY+L+A T+S Sbjct: 330 FNFGNGAKITVPNTEYVYQNG--DGTCLWGIQPSDDTILGDNFLRHAYYLLYNLDANTIS 387 Query: 135 FA 130 A Sbjct: 388 IA 389
>HPS4_MOUSE (Q99KG7) Hermansky-Pudlak syndrome 4 protein homolog (Light-ear| protein) (Le protein) Length = 671 Score = 27.3 bits (59), Expect = 9.5 Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 3/48 (6%) Frame = +1 Query: 169 AHVLLHEVADRGARVPGVG---QEDAQAPPPRVVQDVVPARQFEVRAL 303 A VLLH+ R+PG G QE A PP V V + EV +L Sbjct: 211 AKVLLHQTVPADQRLPGAGAAPQETGAALPPDVQITSVFLSEEEVASL 258
>CHEW_TREPA (O83453) Chemotaxis protein cheW| Length = 170 Score = 27.3 bits (59), Expect = 9.5 Identities = 12/20 (60%), Positives = 14/20 (70%) Frame = +1 Query: 190 VADRGARVPGVGQEDAQAPP 249 + DR ARV V QED Q+PP Sbjct: 109 IIDRIARVIAVSQEDVQSPP 128
>CTNA_DROME (P35220) Alpha-catenin| Length = 917 Score = 27.3 bits (59), Expect = 9.5 Identities = 14/49 (28%), Positives = 26/49 (53%) Frame = -1 Query: 273 NYVLDDPRRGSLCILLADSGDSGATIGNFVQQDMRVLYDLEAETLSFAP 127 N++L+D + + + + D+ D AT G + RV +EAE ++ P Sbjct: 520 NHILEDVNKCVMALQVGDARDLRATAGAIQGRSSRVCNVVEAEMDNYEP 568
>META_BACTN (Q8A531) Homoserine O-succinyltransferase (EC 2.3.1.46) (Homoserine| O-transsuccinylase) (HTS) Length = 305 Score = 27.3 bits (59), Expect = 9.5 Identities = 11/22 (50%), Positives = 15/22 (68%) Frame = -1 Query: 303 QGADLELPRRNYVLDDPRRGSL 238 +G +E+PR YV DDP +G L Sbjct: 253 KGLPIEIPRNYYVDDDPDKGPL 274
>CPSKS_PHASA (O13284) Ent-kaurene synthase (EC 4.2.3.19) (EC 5.5.1.13)| (Ent-copalyl diphosphate synthase) (CPS/KS) (FCPS/KS) Length = 946 Score = 27.3 bits (59), Expect = 9.5 Identities = 10/29 (34%), Positives = 19/29 (65%) Frame = +3 Query: 18 NPTSTCSYLMHARATINDASPFLIHTYRS 104 +P+ST ++LMHA ++A +L H + + Sbjct: 222 SPSSTAAFLMHASPWSHEAEAYLRHVFEA 250 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 43,742,551 Number of Sequences: 219361 Number of extensions: 798992 Number of successful extensions: 2495 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 2416 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2491 length of database: 80,573,946 effective HSP length: 93 effective length of database: 60,173,373 effective search space used: 1444160952 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
