ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal5d12 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_463491.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1563 Score = 139 bits (70), Expect = 7e-30 Identities = 115/130 (88%) Strand = Plus / Minus Query: 212 ggcagatccgccggcggcggaggcagcatggagtcggccgtcgtcccgttctccaccgcg 271 |||||||| || ||||||||||| || | |||||| | |||||||||||| ||||||||| Sbjct: 1553 ggcagatcggcaggcggcggagggaggaaggagtcaggcgtcgtcccgttatccaccgcg 1494 Query: 272 aacaccatcccgagccccatcgggacgtgcgcgtccaggtggcagtgaaaaaaccacatg 331 |||||||| |||||||||||||| ||||||||||| |||||||| || || ||||||||| Sbjct: 1493 aacaccatgccgagccccatcggaacgtgcgcgtcaaggtggcaatggaagaaccacatg 1434 Query: 332 cctgggttgt 341 ||||| |||| Sbjct: 1433 cctggattgt 1424
>dbj|AK109431.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-A04, full insert sequence Length = 2032 Score = 139 bits (70), Expect = 7e-30 Identities = 115/130 (88%) Strand = Plus / Minus Query: 212 ggcagatccgccggcggcggaggcagcatggagtcggccgtcgtcccgttctccaccgcg 271 |||||||| || ||||||||||| || | |||||| | |||||||||||| ||||||||| Sbjct: 1738 ggcagatcggcaggcggcggagggaggaaggagtcaggcgtcgtcccgttatccaccgcg 1679 Query: 272 aacaccatcccgagccccatcgggacgtgcgcgtccaggtggcagtgaaaaaaccacatg 331 |||||||| |||||||||||||| ||||||||||| |||||||| || || ||||||||| Sbjct: 1678 aacaccatgccgagccccatcggaacgtgcgcgtcaaggtggcaatggaagaaccacatg 1619 Query: 332 cctgggttgt 341 ||||| |||| Sbjct: 1618 cctggattgt 1609
>dbj|AK065154.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002B17, full insert sequence Length = 1996 Score = 139 bits (70), Expect = 7e-30 Identities = 115/130 (88%) Strand = Plus / Minus Query: 212 ggcagatccgccggcggcggaggcagcatggagtcggccgtcgtcccgttctccaccgcg 271 |||||||| || ||||||||||| || | |||||| | |||||||||||| ||||||||| Sbjct: 1737 ggcagatcggcaggcggcggagggaggaaggagtcaggcgtcgtcccgttatccaccgcg 1678 Query: 272 aacaccatcccgagccccatcgggacgtgcgcgtccaggtggcagtgaaaaaaccacatg 331 |||||||| |||||||||||||| ||||||||||| |||||||| || || ||||||||| Sbjct: 1677 aacaccatgccgagccccatcggaacgtgcgcgtcaaggtggcaatggaagaaccacatg 1618 Query: 332 cctgggttgt 341 ||||| |||| Sbjct: 1617 cctggattgt 1608
>dbj|AK061816.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-B06, full insert sequence Length = 1978 Score = 139 bits (70), Expect = 7e-30 Identities = 115/130 (88%) Strand = Plus / Minus Query: 212 ggcagatccgccggcggcggaggcagcatggagtcggccgtcgtcccgttctccaccgcg 271 |||||||| || ||||||||||| || | |||||| | |||||||||||| ||||||||| Sbjct: 1716 ggcagatcggcaggcggcggagggaggaaggagtcaggcgtcgtcccgttatccaccgcg 1657 Query: 272 aacaccatcccgagccccatcgggacgtgcgcgtccaggtggcagtgaaaaaaccacatg 331 |||||||| |||||||||||||| ||||||||||| |||||||| || || ||||||||| Sbjct: 1656 aacaccatgccgagccccatcggaacgtgcgcgtcaaggtggcaatggaagaaccacatg 1597 Query: 332 cctgggttgt 341 ||||| |||| Sbjct: 1596 cctggattgt 1587
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 135 bits (68), Expect = 1e-28 Identities = 110/124 (88%) Strand = Plus / Minus Query: 212 ggcagatccgccggcggcggaggcagcatggagtcggccgtcgtcccgttctccaccgcg 271 |||||||| || ||||||||||| || | |||||| | |||||||||||| ||||||||| Sbjct: 36620626 ggcagatcggcaggcggcggagggaggaaggagtcaggcgtcgtcccgttatccaccgcg 36620567 Query: 272 aacaccatcccgagccccatcgggacgtgcgcgtccaggtggcagtgaaaaaaccacatg 331 |||||||| |||||||||||||| ||||||||||| |||||||| || || ||||||||| Sbjct: 36620566 aacaccatgccgagccccatcggaacgtgcgcgtcaaggtggcaatggaagaaccacatg 36620507 Query: 332 cctg 335 |||| Sbjct: 36620506 cctg 36620503
>dbj|AP003242.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0414E03 Length = 139598 Score = 135 bits (68), Expect = 1e-28 Identities = 110/124 (88%) Strand = Plus / Minus Query: 212 ggcagatccgccggcggcggaggcagcatggagtcggccgtcgtcccgttctccaccgcg 271 |||||||| || ||||||||||| || | |||||| | |||||||||||| ||||||||| Sbjct: 134001 ggcagatcggcaggcggcggagggaggaaggagtcaggcgtcgtcccgttatccaccgcg 133942 Query: 272 aacaccatcccgagccccatcgggacgtgcgcgtccaggtggcagtgaaaaaaccacatg 331 |||||||| |||||||||||||| ||||||||||| |||||||| || || ||||||||| Sbjct: 133941 aacaccatgccgagccccatcggaacgtgcgcgtcaaggtggcaatggaagaaccacatg 133882 Query: 332 cctg 335 |||| Sbjct: 133881 cctg 133878
>dbj|AP004072.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0529H11 Length = 165969 Score = 135 bits (68), Expect = 1e-28 Identities = 110/124 (88%) Strand = Plus / Minus Query: 212 ggcagatccgccggcggcggaggcagcatggagtcggccgtcgtcccgttctccaccgcg 271 |||||||| || ||||||||||| || | |||||| | |||||||||||| ||||||||| Sbjct: 93892 ggcagatcggcaggcggcggagggaggaaggagtcaggcgtcgtcccgttatccaccgcg 93833 Query: 272 aacaccatcccgagccccatcgggacgtgcgcgtccaggtggcagtgaaaaaaccacatg 331 |||||||| |||||||||||||| ||||||||||| |||||||| || || ||||||||| Sbjct: 93832 aacaccatgccgagccccatcggaacgtgcgcgtcaaggtggcaatggaagaaccacatg 93773 Query: 332 cctg 335 |||| Sbjct: 93772 cctg 93769
>gb|AF465470.1| Lolium perenne laccase LAC5-4 mRNA, complete cds Length = 2156 Score = 105 bits (53), Expect = 9e-20 Identities = 80/89 (89%) Strand = Plus / Minus Query: 239 atggagtcggccgtcgtcccgttctccaccgcgaacaccatcccgagccccatcgggacg 298 |||||||| | |||||| || ||||||||||| |||||||| ||||||||||| || ||| Sbjct: 1691 atggagtcaggcgtcgttccattctccaccgcaaacaccatgccgagccccatgggaacg 1632 Query: 299 tgcgcgtccaggtggcagtgaaaaaacca 327 ||||||||||||||||||||||| ||||| Sbjct: 1631 tgcgcgtccaggtggcagtgaaagaacca 1603
>gb|AY897208.1| Zea mays laccase 1 (LAC1) mRNA, complete cds Length = 2289 Score = 105 bits (53), Expect = 9e-20 Identities = 107/125 (85%) Strand = Plus / Minus Query: 217 atccgccggcggcggaggcagcatggagtcggccgtcgtcccgttctccaccgcgaacac 276 |||| ||||||||| ||| ||| ||||| ||| |||||||||| | |||||| |||||| Sbjct: 1719 atcccccggcggcgtagggagcgtggagccgggcgtcgtcccgctgtccacctggaacac 1660 Query: 277 catcccgagccccatcgggacgtgcgcgtccaggtggcagtgaaaaaaccacatgcctgg 336 ||| || || ||||| || ||||||| |||||||||||||||||| |||||||||||||| Sbjct: 1659 catgcccaggcccataggcacgtgcgggtccaggtggcagtgaaagaaccacatgcctgg 1600 Query: 337 gttgt 341 |||| Sbjct: 1599 attgt 1595
>gb|AY106856.1| Zea mays PCO061287 mRNA sequence Length = 719 Score = 105 bits (53), Expect = 9e-20 Identities = 107/125 (85%) Strand = Plus / Minus Query: 217 atccgccggcggcggaggcagcatggagtcggccgtcgtcccgttctccaccgcgaacac 276 |||| ||||||||| ||| ||| ||||| ||| |||||||||| | |||||| |||||| Sbjct: 415 atcccccggcggcgtagggagcgtggagccgggcgtcgtcccgctgtccacctggaacac 356 Query: 277 catcccgagccccatcgggacgtgcgcgtccaggtggcagtgaaaaaaccacatgcctgg 336 ||| || || ||||| || ||||||| |||||||||||||||||| |||||||||||||| Sbjct: 355 catgcccaggcccataggcacgtgcgggtccaggtggcagtgaaagaaccacatgcctgg 296 Query: 337 gttgt 341 |||| Sbjct: 295 attgt 291
>gb|AY897209.1| Zea mays laccase 1 (LAC1) gene, complete cds Length = 3771 Score = 103 bits (52), Expect = 4e-19 Identities = 106/124 (85%) Strand = Plus / Minus Query: 217 atccgccggcggcggaggcagcatggagtcggccgtcgtcccgttctccaccgcgaacac 276 |||| ||||||||| ||| ||| ||||| ||| |||||||||| | |||||| |||||| Sbjct: 3222 atcccccggcggcgtagggagcgtggagccgggcgtcgtcccgctgtccacctggaacac 3163 Query: 277 catcccgagccccatcgggacgtgcgcgtccaggtggcagtgaaaaaaccacatgcctgg 336 ||| || || ||||| || ||||||| |||||||||||||||||| ||||||||||||| Sbjct: 3162 catgcccaggcccataggcacgtgcgggtccaggtggcagtgaaagaaccacatgcctgc 3103 Query: 337 gttg 340 |||| Sbjct: 3102 gttg 3099
>gb|AC092989.6| Homo sapiens 3 BAC RP11-237P21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 168492 Score = 48.1 bits (24), Expect = 0.019 Identities = 24/24 (100%) Strand = Plus / Plus Query: 140 caattaattctgtaaatttgcagg 163 |||||||||||||||||||||||| Sbjct: 102669 caattaattctgtaaatttgcagg 102692
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 46.1 bits (23), Expect = 0.073 Identities = 23/23 (100%) Strand = Plus / Plus Query: 213 gcagatccgccggcggcggaggc 235 ||||||||||||||||||||||| Sbjct: 22138739 gcagatccgccggcggcggaggc 22138761
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 46.1 bits (23), Expect = 0.073 Identities = 23/23 (100%) Strand = Plus / Plus Query: 213 gcagatccgccggcggcggaggc 235 ||||||||||||||||||||||| Sbjct: 22067084 gcagatccgccggcggcggaggc 22067106
>emb|AL731742.3|CNS08C7R Oryza sativa chromosome 12, . BAC OJ1123_B09 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 155585 Score = 46.1 bits (23), Expect = 0.073 Identities = 23/23 (100%) Strand = Plus / Minus Query: 213 gcagatccgccggcggcggaggc 235 ||||||||||||||||||||||| Sbjct: 114271 gcagatccgccggcggcggaggc 114249
>ref|NM_190623.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1665 Score = 44.1 bits (22), Expect = 0.29 Identities = 49/58 (84%) Strand = Plus / Minus Query: 284 agccccatcgggacgtgcgcgtccaggtggcagtgaaaaaaccacatgcctgggttgt 341 ||||||| ||| | ||||||||||| ||| ||||| | |||||||| |||||||||| Sbjct: 1580 agccccaacggcaggtgcgcgtccaagtgacagtgcatgaaccacatacctgggttgt 1523
>gb|AC162392.9| Mus musculus 6 BAC RP23-197G11 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 195176 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 138 aacaattaattctgtaaattt 158 ||||||||||||||||||||| Sbjct: 86017 aacaattaattctgtaaattt 86037
>gb|AC067854.14| Homo sapiens chromosome 8, clone RP11-513H8, complete sequence Length = 203982 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 126 acacacacaaagaacaattaa 146 ||||||||||||||||||||| Sbjct: 154373 acacacacaaagaacaattaa 154393
>gb|AC021017.4|AC021017 Homo sapiens BAC clone RP11-382E10 from 8, complete sequence Length = 182988 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 126 acacacacaaagaacaattaa 146 ||||||||||||||||||||| Sbjct: 147698 acacacacaaagaacaattaa 147678
>gb|AC131036.4| Mus musculus chromosome 5, clone RP23-358D12, complete sequence Length = 197112 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 acacacacaaagaacaatta 145 |||||||||||||||||||| Sbjct: 140063 acacacacaaagaacaatta 140044
>gb|AC119244.12| Mus musculus chromosome 5, clone RP24-231P10, complete sequence Length = 210235 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 acacacacaaagaacaatta 145 |||||||||||||||||||| Sbjct: 197150 acacacacaaagaacaatta 197169
>gb|BC060190.1| Mus musculus RIKEN cDNA 9630019K15 gene, mRNA (cDNA clone MGC:65665 IMAGE:6833275), complete cds Length = 3433 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 ccgccggcggcggaggcagc 238 |||||||||||||||||||| Sbjct: 475 ccgccggcggcggaggcagc 456
>gb|BC016931.1| Homo sapiens pannexin 1, mRNA (cDNA clone MGC:21309 IMAGE:4390851), complete cds Length = 1803 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 ccgccggcggcggaggcagc 238 |||||||||||||||||||| Sbjct: 173 ccgccggcggcggaggcagc 192
>ref|NM_178774.3| Mus musculus RIKEN cDNA 9630019K15 gene (9630019K15Rik), mRNA Length = 3433 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 ccgccggcggcggaggcagc 238 |||||||||||||||||||| Sbjct: 475 ccgccggcggcggaggcagc 456
>gb|AF398509.1| Homo sapiens pannexin 1 (PANX1) mRNA, complete cds Length = 2771 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 ccgccggcggcggaggcagc 238 |||||||||||||||||||| Sbjct: 176 ccgccggcggcggaggcagc 195
>gb|AF398506.1|AF398506S1 Homo sapiens pannexin 1 (PANX1) gene, exon 1 Length = 1500 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 ccgccggcggcggaggcagc 238 |||||||||||||||||||| Sbjct: 782 ccgccggcggcggaggcagc 801
>gb|AC164431.2| Mus musculus BAC clone RP23-430N15 from chromosome 17, complete sequence Length = 190724 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 ccgccggcggcggaggcagc 238 |||||||||||||||||||| Sbjct: 143143 ccgccggcggcggaggcagc 143124
>emb|AL606634.2|OSJN00066 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0072N21, complete sequence Length = 130433 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 ggcagatccgccggcggcgg 231 |||||||||||||||||||| Sbjct: 36801 ggcagatccgccggcggcgg 36820
>dbj|AK074897.1| Homo sapiens cDNA FLJ90416 fis, clone NT2RP3000169, highly similar to Pannexin 1 Length = 2703 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 ccgccggcggcggaggcagc 238 |||||||||||||||||||| Sbjct: 123 ccgccggcggcggaggcagc 142
>gb|AC114967.2| Homo sapiens chromosome 5 clone RP11-301A5, complete sequence Length = 215308 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 141 aattaattctgtaaatttgcaggc 164 ||||||||| |||||||||||||| Sbjct: 14447 aattaattcagtaaatttgcaggc 14470
>ref|NM_135790.2| Drosophila melanogaster CG31729-RB, transcript variant B (CG31729), mRNA Length = 5047 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 ccgccggcggcggaggcagc 238 |||||||||||||||||||| Sbjct: 860 ccgccggcggcggaggcagc 879
>gb|AC026732.5| Homo sapiens chromosome 5 clone CTD-2303L1, complete sequence Length = 104039 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 141 aattaattctgtaaatttgcaggc 164 ||||||||| |||||||||||||| Sbjct: 26012 aattaattcagtaaatttgcaggc 25989
>gb|AC092976.5| Homo sapiens 3q BAC RP11-297C5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 44051 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 aagaacaattaattctgtaa 154 |||||||||||||||||||| Sbjct: 20103 aagaacaattaattctgtaa 20084
>gb|AC107021.4| Homo sapiens 3 BAC RP11-274H2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 161731 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 aagaacaattaattctgtaa 154 |||||||||||||||||||| Sbjct: 18987 aagaacaattaattctgtaa 19006
>gb|AY069493.1| Drosophila melanogaster LD22119 full length cDNA Length = 4938 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 ccgccggcggcggaggcagc 238 |||||||||||||||||||| Sbjct: 859 ccgccggcggcggaggcagc 878
>gb|AY048509.1| Homo sapiens pannexin 1 (PANX1) gene, partial cds Length = 1430 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 ccgccggcggcggaggcagc 238 |||||||||||||||||||| Sbjct: 782 ccgccggcggcggaggcagc 801
>dbj|AK035939.1| Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:9630019K15 product:hypothetical protein, full insert sequence Length = 2312 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 ccgccggcggcggaggcagc 238 |||||||||||||||||||| Sbjct: 142 ccgccggcggcggaggcagc 123
>dbj|AK039752.1| Mus musculus adult male spinal cord cDNA, RIKEN full-length enriched library, clone:A330103H02 product:hypothetical protein, full insert sequence Length = 2442 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 ccgccggcggcggaggcagc 238 |||||||||||||||||||| Sbjct: 144 ccgccggcggcggaggcagc 125
>dbj|AK045379.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230111A21 product:hypothetical protein, full insert sequence Length = 2625 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 ccgccggcggcggaggcagc 238 |||||||||||||||||||| Sbjct: 451 ccgccggcggcggaggcagc 432
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 ggcagatccgccggcggcgg 231 |||||||||||||||||||| Sbjct: 8226288 ggcagatccgccggcggcgg 8226307
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 ccgccggcggcggaggcagc 238 |||||||||||||||||||| Sbjct: 2709276 ccgccggcggcggaggcagc 2709295
>ref|XM_392215.2| PREDICTED: Apis mellifera similar to ENSANGP00000022213 (LOC408677), mRNA Length = 13521 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 cgtcgtcccgttctccaccg 269 |||||||||||||||||||| Sbjct: 12588 cgtcgtcccgttctccaccg 12569
>gb|AC009340.4|AC009340 Drosophila melanogaster, chromosome 2L, region 34A-34E, BAC clone BACR04E19, complete sequence Length = 197159 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 ccgccggcggcggaggcagc 238 |||||||||||||||||||| Sbjct: 80044 ccgccggcggcggaggcagc 80063
>ref|NM_015368.3| Homo sapiens pannexin 1 (PANX1), mRNA Length = 2782 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 ccgccggcggcggaggcagc 238 |||||||||||||||||||| Sbjct: 178 ccgccggcggcggaggcagc 197
>dbj|AP004806.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0710H01 Length = 187107 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 ccgccggcggcggaggcagc 238 |||||||||||||||||||| Sbjct: 164617 ccgccggcggcggaggcagc 164636
>dbj|AP006554.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0529C07 Length = 174011 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 ccgccggcggcggaggcagc 238 |||||||||||||||||||| Sbjct: 121023 ccgccggcggcggaggcagc 121042
>dbj|AK109448.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-110-G01, full insert sequence Length = 698 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 ggcagatccgccggcggcgg 231 |||||||||||||||||||| Sbjct: 321 ggcagatccgccggcggcgg 340
>dbj|AK105500.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-D04, full insert sequence Length = 1631 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 ggcagatccgccggcggcgg 231 |||||||||||||||||||| Sbjct: 330 ggcagatccgccggcggcgg 349
>gb|AE003639.3| Drosophila melanogaster chromosome 2L, section 48 of 83 of the complete sequence Length = 261775 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 ccgccggcggcggaggcagc 238 |||||||||||||||||||| Sbjct: 170144 ccgccggcggcggaggcagc 170163
>gb|AF093239.1|AF093239 Homo sapiens MRS1 mRNA, complete cds Length = 2738 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 ccgccggcggcggaggcagc 238 |||||||||||||||||||| Sbjct: 141 ccgccggcggcggaggcagc 160
>dbj|AP003966.2| Homo sapiens genomic DNA, chromosome 11q, clone:CTD-2508F7, complete sequence Length = 97000 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 ccgccggcggcggaggcagc 238 |||||||||||||||||||| Sbjct: 50273 ccgccggcggcggaggcagc 50292 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,826,420 Number of Sequences: 3902068 Number of extensions: 2826420 Number of successful extensions: 49792 Number of sequences better than 10.0: 51 Number of HSP's better than 10.0 without gapping: 51 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 49601 Number of HSP's gapped (non-prelim): 191 length of query: 342 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 320 effective length of database: 17,147,199,772 effective search space: 5487103927040 effective search space used: 5487103927040 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
