ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal5d10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK067799.1| Oryza sativa (japonica cultivar-group) cDNA clon... 202 1e-48
2dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 107 4e-20
3dbj|AP006533.3| Oryza sativa (japonica cultivar-group) genomic D... 107 4e-20
4ref|NM_102653.2| Arabidopsis thaliana catalytic AT1G29120 transc... 64 6e-07
5ref|NM_202206.1| Arabidopsis thaliana catalytic AT1G29120 transc... 64 6e-07
6gb|BT015769.1| Arabidopsis thaliana At1g29120 mRNA, complete cds 64 6e-07
7gb|AY093168.1| Arabidopsis thaliana unknown protein (At1g29120:A... 64 6e-07
8emb|BX842513.1|CNS0ACDH Arabidopsis thaliana Full-length cDNA Co... 64 6e-07
9emb|BX842509.1|CNS0AC4Y Arabidopsis thaliana Full-length cDNA Co... 64 6e-07
10emb|BX842501.1|CNS0ABMD Arabidopsis thaliana Full-length cDNA Co... 64 6e-07
11dbj|AK176749.1| Arabidopsis thaliana mRNA, complete cds, clone: ... 64 6e-07
12ref|NM_001036029.1| Arabidopsis thaliana catalytic AT1G29120 tra... 56 1e-04
13gb|AC021043.4|AC021043 Arabidopsis thaliana chromosome I BAC F28... 56 1e-04
14dbj|AK175462.1| Arabidopsis thaliana mRNA, complete cds, clone: ... 56 1e-04
15dbj|AK175257.1| Arabidopsis thaliana mRNA, complete cds, clone: ... 56 1e-04
16dbj|AK175157.1| Arabidopsis thaliana mRNA, complete cds, clone: ... 56 1e-04
17ref|NM_001036030.1| Arabidopsis thaliana catalytic AT1G29120 tra... 52 0.002
18dbj|AB027535.1| Ipomoea nil CHS-E gene for chalcone synthase, co... 46 0.14
19emb|AL355863.18| Human DNA sequence from clone RP11-479A21 on ch... 44 0.55
20gb|AC124957.18| Medicago truncatula clone mth2-15k14, complete s... 44 0.55
21gb|AC150799.4| Medicago truncatula chromosome 2 BAC clone mth2-4... 44 0.55
22gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome 44 0.55
23ref|NM_183257.1| Mus musculus hepcidin antimicrobial peptide 2 (... 42 2.2
24emb|AL355672.12| Human DNA sequence from clone RP11-165C19 on ch... 42 2.2
25emb|AL157393.21| Human DNA sequence from clone RP11-31A20 on chr... 42 2.2
26gb|AC157792.4| Mus musculus chromosome 7, clone RP24-192N20, com... 42 2.2
27gb|BC086895.1| Mus musculus hepcidin antimicrobial peptide 2, mR... 42 2.2
28gb|AY232841.1| Mus musculus hepcidin antimicrobial peptide 2 (Ha... 42 2.2
29dbj|AK008993.1| Mus musculus adult male stomach cDNA, RIKEN full... 42 2.2
30dbj|AK007975.1| Mus musculus 10 day old male pancreas cDNA, RIKE... 42 2.2
31gb|AC149055.6| Mus musculus BAC clone RP23-358K1 from chromosome... 42 2.2
32gb|AC115927.10| Mus musculus chromosome 1, clone RP24-529H22, co... 42 2.2
33gb|AC120438.9| Mus musculus chromosome 7, clone RP24-572G2, comp... 42 2.2
34gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome 40 8.6
35gb|AC121309.10| Mus musculus chromosome 3, clone RP24-303N8, com... 40 8.6
36gb|AC158974.8| Mus musculus chromosome 15, clone RP24-252G18, co... 40 8.6
37gb|BC073349.1| Xenopus laevis MGC80764 protein, mRNA (cDNA clone... 40 8.6
38gb|DP000012.1| Macropus eugenii target 1 genomic scaffold 40 8.6
39gb|AC133098.7| Mus musculus BAC clone RP23-336L12 from chromosom... 40 8.6
40gb|BC060426.1| Xenopus laevis hypothetical protein MGC68724, mRN... 40 8.6
41gb|AC139334.3| Mus musculus BAC clone RP23-449C21 from chromosom... 40 8.6
42gb|BC005705.1| Mus musculus cDNA clone MGC:11898 IMAGE:3598523, ... 40 8.6
43gb|AE017245.1| Mycoplasma synoviae 53, complete genome 40 8.6
44ref|XM_783201.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 8.6
45emb|AL161892.9| Human DNA sequence from clone RP11-173N7 on chro... 40 8.6
46emb|CR392356.5| Mouse DNA sequence from clone RP23-329D21 on chr... 40 8.6
47emb|BX842654.1| Bdellovibrio bacteriovorus complete genome, stra... 40 8.6
48gb|AC159656.11| Mus musculus 6 BAC RP24-85F2 (Roswell Park Cance... 40 8.6
49emb|AL773513.3| Mouse DNA sequence from clone RP24-535M24 on chr... 40 8.6
50emb|BX663604.9| Zebrafish DNA sequence from clone CH211-222K9 in... 40 8.6
51gb|DP000040.1| Otolemur garnettii target 106 genomic scaffold 40 8.6
52emb|AL844152.9| Zebrafish DNA sequence from clone DKEY-37L7, com... 40 8.6
53gb|AC145041.3| Macropus eugenii clone ME_KBa-210M21, complete se... 40 8.6
54gb|AC155715.24| Mus musculus 10 BAC RP24-118H2 (Roswell Park Can... 40 8.6 
>dbj|AK067799.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013114C10, full
            insert sequence
          Length = 2539

 Score =  202 bits (102), Expect = 1e-48
 Identities = 195/226 (86%)
 Strand = Plus / Minus

                                                                        
Query: 407  ctgtttcatgctgtccgcgacgtgggcgataacaccggcgccagcgttgtgaagccactc 466
            |||||| ||||||||||| || |||||||| || ||||| || || ||||||||||||||
Sbjct: 2155 ctgttttatgctgtccgccacatgggcgatgacgccggcaccggcattgtgaagccactc 2096

                                                                        
Query: 467  attcttaacatgcatgttgttgtgagcagagtaaggccacagtgatgcatggaagttgac 526
            |||||||||||| |||||||| |||||| |||||||||| |||| || ||||||||||||
Sbjct: 2095 attcttaacatgtatgttgttatgagcaaagtaaggccatagtgctgtatggaagttgac 2036

                                                                        
Query: 527  atctactttcttccaacccactctctgcagaccacgaatcatctcctcttccatcatctg 586
            |||||||||||||||||| || |||||||  ||| | |||||||||||||||||||| | 
Sbjct: 2035 atctactttcttccaaccgaccctctgcaagccatggatcatctcctcttccatcatttc 1976

                                                          
Query: 587  gtgatattcattggtattttccatgttcggtgtactttgtgcagct 632
            ||||||||| |  || |||||  |||| ||| |||| |||||||||
Sbjct: 1975 gtgatattcttcagtgttttctttgtttggtctactctgtgcagct 1930
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  107 bits (54), Expect = 4e-20
 Identities = 90/102 (88%)
 Strand = Plus / Minus

                                                                           
Query: 474     acatgcatgttgttgtgagcagagtaaggccacagtgatgcatggaagttgacatctact 533
               ||||| |||||||| |||||| |||||||||| |||| || |||||||||||||||||||
Sbjct: 2804696 acatgtatgttgttatgagcaaagtaaggccatagtgctgtatggaagttgacatctact 2804637

                                                         
Query: 534     ttcttccaacccactctctgcagaccacgaatcatctcctct 575
               ||||||||||| || |||||||  ||| | ||||||||||||
Sbjct: 2804636 ttcttccaaccgaccctctgcaagccatggatcatctcctct 2804595



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 66/75 (88%)
 Strand = Plus / Minus

                                                                           
Query: 407     ctgtttcatgctgtccgcgacgtgggcgataacaccggcgccagcgttgtgaagccactc 466
               |||||| ||||||||||| || |||||||| || ||||| || || ||||||||||||||
Sbjct: 2804855 ctgttttatgctgtccgccacatgggcgatgacgccggcaccggcattgtgaagccactc 2804796

                              
Query: 467     attcttaacatgcat 481
               ||||||||| |||||
Sbjct: 2804795 attcttaacctgcat 2804781
to top
>dbj|AP006533.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0085L11
          Length = 148142

 Score =  107 bits (54), Expect = 4e-20
 Identities = 90/102 (88%)
 Strand = Plus / Minus

                                                                         
Query: 474   acatgcatgttgttgtgagcagagtaaggccacagtgatgcatggaagttgacatctact 533
             ||||| |||||||| |||||| |||||||||| |||| || |||||||||||||||||||
Sbjct: 48177 acatgtatgttgttatgagcaaagtaaggccatagtgctgtatggaagttgacatctact 48118

                                                       
Query: 534   ttcttccaacccactctctgcagaccacgaatcatctcctct 575
             ||||||||||| || |||||||  ||| | ||||||||||||
Sbjct: 48117 ttcttccaaccgaccctctgcaagccatggatcatctcctct 48076



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 66/75 (88%)
 Strand = Plus / Minus

                                                                         
Query: 407   ctgtttcatgctgtccgcgacgtgggcgataacaccggcgccagcgttgtgaagccactc 466
             |||||| ||||||||||| || |||||||| || ||||| || || ||||||||||||||
Sbjct: 48336 ctgttttatgctgtccgccacatgggcgatgacgccggcaccggcattgtgaagccactc 48277

                            
Query: 467   attcttaacatgcat 481
             ||||||||| |||||
Sbjct: 48276 attcttaacctgcat 48262
to top
>ref|NM_102653.2| Arabidopsis thaliana catalytic AT1G29120 transcript variant
            AT1G29120.1 mRNA, complete cds
          Length = 1846

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 56/64 (87%)
 Strand = Plus / Minus

                                                                        
Query: 516  tggaagttgacatctactttcttccaacccactctctgcagaccacgaatcatctcctct 575
            |||||| ||||||| ||||||||||| ||||  ||||||||||| || ||||| ||||||
Sbjct: 1422 tggaagctgacatcaactttcttccaccccaacctctgcagaccgcggatcatttcctct 1363

                
Query: 576  tcca 579
            ||||
Sbjct: 1362 tcca 1359
to top
>ref|NM_202206.1| Arabidopsis thaliana catalytic AT1G29120 transcript variant
            AT1G29120.2 mRNA, complete cds
          Length = 1808

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 56/64 (87%)
 Strand = Plus / Minus

                                                                        
Query: 516  tggaagttgacatctactttcttccaacccactctctgcagaccacgaatcatctcctct 575
            |||||| ||||||| ||||||||||| ||||  ||||||||||| || ||||| ||||||
Sbjct: 1462 tggaagctgacatcaactttcttccaccccaacctctgcagaccgcggatcatttcctct 1403

                
Query: 576  tcca 579
            ||||
Sbjct: 1402 tcca 1399
to top
>gb|BT015769.1| Arabidopsis thaliana At1g29120 mRNA, complete cds
          Length = 1368

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 56/64 (87%)
 Strand = Plus / Minus

                                                                        
Query: 516  tggaagttgacatctactttcttccaacccactctctgcagaccacgaatcatctcctct 575
            |||||| ||||||| ||||||||||| ||||  ||||||||||| || ||||| ||||||
Sbjct: 1223 tggaagctgacatcaactttcttccaccccaacctctgcagaccgcggatcatttcctct 1164

                
Query: 576  tcca 579
            ||||
Sbjct: 1163 tcca 1160
to top
>gb|AY093168.1| Arabidopsis thaliana unknown protein (At1g29120:At1g29130) mRNA,
            complete cds
          Length = 1838

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 56/64 (87%)
 Strand = Plus / Minus

                                                                        
Query: 516  tggaagttgacatctactttcttccaacccactctctgcagaccacgaatcatctcctct 575
            |||||| ||||||| ||||||||||| ||||  ||||||||||| || ||||| ||||||
Sbjct: 1422 tggaagctgacatcaactttcttccaccccaacctctgcagaccgcggatcatttcctct 1363

                
Query: 576  tcca 579
            ||||
Sbjct: 1362 tcca 1359
to top
>emb|BX842513.1|CNS0ACDH Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS19ZA07 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1809

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 56/64 (87%)
 Strand = Plus / Minus

                                                                        
Query: 516  tggaagttgacatctactttcttccaacccactctctgcagaccacgaatcatctcctct 575
            |||||| ||||||| ||||||||||| ||||  ||||||||||| || ||||| ||||||
Sbjct: 1463 tggaagctgacatcaactttcttccaccccaacctctgcagaccgcggatcatttcctct 1404

                
Query: 576  tcca 579
            ||||
Sbjct: 1403 tcca 1400
to top
>emb|BX842509.1|CNS0AC4Y Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB82ZA11 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1747

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 56/64 (87%)
 Strand = Plus / Minus

                                                                        
Query: 516  tggaagttgacatctactttcttccaacccactctctgcagaccacgaatcatctcctct 575
            |||||| ||||||| ||||||||||| ||||  ||||||||||| || ||||| ||||||
Sbjct: 1403 tggaagctgacatcaactttcttccaccccaacctctgcagaccgcggatcatttcctct 1344

                
Query: 576  tcca 579
            ||||
Sbjct: 1343 tcca 1340
to top
>emb|BX842501.1|CNS0ABMD Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH25ZF04 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1776

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 56/64 (87%)
 Strand = Plus / Minus

                                                                        
Query: 516  tggaagttgacatctactttcttccaacccactctctgcagaccacgaatcatctcctct 575
            |||||| ||||||| ||||||||||| ||||  ||||||||||| || ||||| ||||||
Sbjct: 1398 tggaagctgacatcaactttcttccaccccaacctctgcagaccgcggatcatttcctct 1339

                
Query: 576  tcca 579
            ||||
Sbjct: 1338 tcca 1335
to top
>dbj|AK176749.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL25-28-O12
          Length = 1852

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 56/64 (87%)
 Strand = Plus / Minus

                                                                        
Query: 516  tggaagttgacatctactttcttccaacccactctctgcagaccacgaatcatctcctct 575
            |||||| ||||||| ||||||||||| ||||  ||||||||||| || ||||| ||||||
Sbjct: 1419 tggaagctgacatcaactttcttccaccccaacctctgcagaccgcggatcatttcctct 1360

                
Query: 576  tcca 579
            ||||
Sbjct: 1359 tcca 1356
to top
>ref|NM_001036029.1| Arabidopsis thaliana catalytic AT1G29120 transcript variant
            AT1G29120.3 mRNA, complete cds
          Length = 1964

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 52/60 (86%)
 Strand = Plus / Minus

                                                                        
Query: 516  tggaagttgacatctactttcttccaacccactctctgcagaccacgaatcatctcctct 575
            |||||| ||||||| ||||||||||| ||||  ||||||||||| || ||||| ||||||
Sbjct: 1504 tggaagctgacatcaactttcttccaccccaacctctgcagaccgcggatcatttcctct 1445
to top
>gb|AC021043.4|AC021043 Arabidopsis thaliana chromosome I BAC F28N24 genomic sequence, complete
             sequence
          Length = 154716

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 52/60 (86%)
 Strand = Plus / Plus

                                                                         
Query: 516   tggaagttgacatctactttcttccaacccactctctgcagaccacgaatcatctcctct 575
             |||||| ||||||| ||||||||||| ||||  ||||||||||| || ||||| ||||||
Sbjct: 85472 tggaagctgacatcaactttcttccaccccaacctctgcagaccgcggatcatttcctct 85531
to top
>dbj|AK175462.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL21-89-D11
          Length = 1936

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 52/60 (86%)
 Strand = Plus / Minus

                                                                        
Query: 516  tggaagttgacatctactttcttccaacccactctctgcagaccacgaatcatctcctct 575
            |||||| ||||||| ||||||||||| ||||  ||||||||||| || ||||| ||||||
Sbjct: 1504 tggaagctgacatcaactttcttccaccccaacctctgcagaccgcggatcatttcctct 1445
to top
>dbj|AK175257.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL21-69-E05
          Length = 1935

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 52/60 (86%)
 Strand = Plus / Minus

                                                                        
Query: 516  tggaagttgacatctactttcttccaacccactctctgcagaccacgaatcatctcctct 575
            |||||| ||||||| ||||||||||| ||||  ||||||||||| || ||||| ||||||
Sbjct: 1503 tggaagctgacatcaactttcttccaccccaacctctgcagaccgcggatcatttcctct 1444
to top
>dbj|AK175157.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL21-57-I05
          Length = 1936

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 52/60 (86%)
 Strand = Plus / Minus

                                                                        
Query: 516  tggaagttgacatctactttcttccaacccactctctgcagaccacgaatcatctcctct 575
            |||||| ||||||| ||||||||||| ||||  ||||||||||| || ||||| ||||||
Sbjct: 1504 tggaagctgacatcaactttcttccaccccaacctctgcagaccgcggatcatttcctct 1445
to top
>ref|NM_001036030.1| Arabidopsis thaliana catalytic AT1G29120 transcript variant
            AT1G29120.4 mRNA, complete cds
          Length = 1831

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 50/58 (86%)
 Strand = Plus / Minus

                                                                      
Query: 516  tggaagttgacatctactttcttccaacccactctctgcagaccacgaatcatctcct 573
            |||||| ||||||| ||||||||||| ||||  ||||||||||| || ||||| ||||
Sbjct: 1424 tggaagctgacatcaactttcttccaccccaacctctgcagaccgcggatcatttcct 1367
to top
>dbj|AB027535.1| Ipomoea nil CHS-E gene for chalcone synthase, complete cds
          Length = 9312

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 515  atggaagttgacatctactttct 537
            |||||||||||||||||||||||
Sbjct: 6475 atggaagttgacatctactttct 6453
to top
>emb|AL355863.18| Human DNA sequence from clone RP11-479A21 on chromosome 10 Contains an
             HSPC023 protein (HSPC023) pseudogene, complete sequence
          Length = 151552

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 389   gttggaaggcaggcatgtctgtttca 414
             ||||||||||||||||||| ||||||
Sbjct: 65198 gttggaaggcaggcatgtcagtttca 65173
to top
>gb|AC124957.18| Medicago truncatula clone mth2-15k14, complete sequence
          Length = 140624

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 57  acttcaaaaacaaaactagaaa 78
           ||||||||||||||||||||||
Sbjct: 790 acttcaaaaacaaaactagaaa 769
to top
>gb|AC150799.4| Medicago truncatula chromosome 2 BAC clone mth2-47j13, complete sequence
          Length = 119159

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 57     acttcaaaaacaaaactagaaa 78
              ||||||||||||||||||||||
Sbjct: 110163 acttcaaaaacaaaactagaaa 110142
to top
>gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome
          Length = 2178400

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 564    atcatctcctcttccatcatct 585
              ||||||||||||||||||||||
Sbjct: 396718 atcatctcctcttccatcatct 396739
to top
>ref|NM_183257.1| Mus musculus hepcidin antimicrobial peptide 2 (Hamp2), mRNA
          Length = 415

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 146 ggagggtttgttacagcactg 166
           |||||||||||||||||||||
Sbjct: 278 ggagggtttgttacagcactg 258
to top
>emb|AL355672.12| Human DNA sequence from clone RP11-165C19 on chromosome 9, complete
            sequence
          Length = 86371

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 396  ggcaggcatgtctgtttcatg 416
            |||||||||||||||||||||
Sbjct: 9868 ggcaggcatgtctgtttcatg 9848
to top
>emb|AL157393.21| Human DNA sequence from clone RP11-31A20 on chromosome 10, complete
             sequence
          Length = 138235

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 50    aaaccagacttcaaaaacaaa 70
             |||||||||||||||||||||
Sbjct: 59080 aaaccagacttcaaaaacaaa 59100
to top
>gb|AC157792.4| Mus musculus chromosome 7, clone RP24-192N20, complete sequence
          Length = 164990

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 354  ggcatatgccagcacaccagg 374
            |||||||||||||||||||||
Sbjct: 4009 ggcatatgccagcacaccagg 3989
to top
>gb|BC086895.1| Mus musculus hepcidin antimicrobial peptide 2, mRNA (cDNA clone
           MGC:107568 IMAGE:6765293), complete cds
          Length = 433

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 146 ggagggtttgttacagcactg 166
           |||||||||||||||||||||
Sbjct: 274 ggagggtttgttacagcactg 254
to top
>gb|AY232841.1| Mus musculus hepcidin antimicrobial peptide 2 (Hamp2) mRNA,
           complete cds
          Length = 406

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 146 ggagggtttgttacagcactg 166
           |||||||||||||||||||||
Sbjct: 266 ggagggtttgttacagcactg 246
to top
>dbj|AK008993.1| Mus musculus adult male stomach cDNA, RIKEN full-length enriched
           library, clone:2210420P15 product:PROHEPCIDIN homolog
           [Mus musculus], full insert sequence
          Length = 415

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 146 ggagggtttgttacagcactg 166
           |||||||||||||||||||||
Sbjct: 278 ggagggtttgttacagcactg 258
to top
>dbj|AK007975.1| Mus musculus 10 day old male pancreas cDNA, RIKEN full-length
           enriched library, clone:1810073K19 product:PROHEPCIDIN
           homolog [Mus musculus], full insert sequence
          Length = 409

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 146 ggagggtttgttacagcactg 166
           |||||||||||||||||||||
Sbjct: 267 ggagggtttgttacagcactg 247
to top
>gb|AC149055.6| Mus musculus BAC clone RP23-358K1 from chromosome 7, complete sequence
          Length = 215193

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 146    ggagggtttgttacagcactg 166
              |||||||||||||||||||||
Sbjct: 145425 ggagggtttgttacagcactg 145405
to top
>gb|AC115927.10| Mus musculus chromosome 1, clone RP24-529H22, complete sequence
          Length = 143911

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 9     tatttgttttagaacatatca 29
             |||||||||||||||||||||
Sbjct: 43334 tatttgttttagaacatatca 43354
to top
>gb|AC120438.9| Mus musculus chromosome 7, clone RP24-572G2, complete sequence
          Length = 169442

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 354    ggcatatgccagcacaccagg 374
              |||||||||||||||||||||
Sbjct: 105425 ggcatatgccagcacaccagg 105405
to top
>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome
          Length = 2364842

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 397    gcaggcatgtctgtttcatg 416
              ||||||||||||||||||||
Sbjct: 870272 gcaggcatgtctgtttcatg 870291
to top
>gb|AC121309.10| Mus musculus chromosome 3, clone RP24-303N8, complete sequence
          Length = 179337

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 30    caaacattgtttcaaagtgc 49
             ||||||||||||||||||||
Sbjct: 67858 caaacattgtttcaaagtgc 67839
to top
>gb|AC158974.8| Mus musculus chromosome 15, clone RP24-252G18, complete sequence
          Length = 170539

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 63    aaaacaaaactagaaagcaa 82
             ||||||||||||||||||||
Sbjct: 61282 aaaacaaaactagaaagcaa 61263
to top
>gb|BC073349.1| Xenopus laevis MGC80764 protein, mRNA (cDNA clone MGC:80764
           IMAGE:5512669), complete cds
          Length = 3192

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 566 catctcctcttccatcatct 585
           ||||||||||||||||||||
Sbjct: 837 catctcctcttccatcatct 856
to top
>gb|DP000012.1| Macropus eugenii target 1 genomic scaffold
          Length = 1996640

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 68      aaaactagaaagcaatctag 87
               ||||||||||||||||||||
Sbjct: 1221163 aaaactagaaagcaatctag 1221182
to top
>gb|AC133098.7| Mus musculus BAC clone RP23-336L12 from chromosome 6, complete sequence
          Length = 182955

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 568    tctcctcttccatcatctgg 587
              ||||||||||||||||||||
Sbjct: 152937 tctcctcttccatcatctgg 152956



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 568    tctcctcttccatcatctgg 587
              ||||||||||||||||||||
Sbjct: 152402 tctcctcttccatcatctgg 152421
to top
>gb|BC060426.1| Xenopus laevis hypothetical protein MGC68724, mRNA (cDNA clone
           MGC:68724 IMAGE:4057122), complete cds
          Length = 1576

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 566 catctcctcttccatcatct 585
           ||||||||||||||||||||
Sbjct: 718 catctcctcttccatcatct 737
to top
>gb|AC139334.3| Mus musculus BAC clone RP23-449C21 from chromosome 18, complete
             sequence
          Length = 194665

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 62    aaaaacaaaactagaaagca 81
             ||||||||||||||||||||
Sbjct: 83153 aaaaacaaaactagaaagca 83134
to top
>gb|BC005705.1| Mus musculus cDNA clone MGC:11898 IMAGE:3598523, complete cds
          Length = 2764

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 568  tctcctcttccatcatctgg 587
            ||||||||||||||||||||
Sbjct: 2353 tctcctcttccatcatctgg 2372
to top
>gb|AE017245.1| Mycoplasma synoviae 53, complete genome
          Length = 799476

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 62     aaaaacaaaactagaaagca 81
              ||||||||||||||||||||
Sbjct: 312639 aaaaacaaaactagaaagca 312620
to top
>ref|XM_783201.1| PREDICTED: Strongylocentrotus purpuratus similar to solute carrier
           family 37 member 4 (LOC583284), partial mRNA
          Length = 639

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 567 atctcctcttccatcatctg 586
           ||||||||||||||||||||
Sbjct: 276 atctcctcttccatcatctg 257
to top
>emb|AL161892.9| Human DNA sequence from clone RP11-173N7 on chromosome 13 Contains a
              pseudogene similar to part of a novel gene (MGC5466), a
              breast carcinoma amplified sequence 2 (DAM1, BCAS2)
              pseudogene and a CpG island, complete sequence
          Length = 146216

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 350    ccgtggcatatgccagcaca 369
              ||||||||||||||||||||
Sbjct: 139811 ccgtggcatatgccagcaca 139830
to top
>emb|CR392356.5| Mouse DNA sequence from clone RP23-329D21 on chromosome 11 Contains a
             novel gene, the 5' end of the Dock2 gene for dedicator of
             cyto-kinesis 2 and a CpG island, complete sequence
          Length = 90351

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 497   gtaaggccacagtgatgcat 516
             ||||||||||||||||||||
Sbjct: 87839 gtaaggccacagtgatgcat 87820
to top
>emb|BX842654.1| Bdellovibrio bacteriovorus complete genome, strain HD100; segment 9/11
          Length = 344249

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 566   catctcctcttccatcatct 585
             ||||||||||||||||||||
Sbjct: 83367 catctcctcttccatcatct 83348
to top
>gb|AC159656.11| Mus musculus 6 BAC RP24-85F2 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 205702

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 568    tctcctcttccatcatctgg 587
              ||||||||||||||||||||
Sbjct: 187708 tctcctcttccatcatctgg 187689



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 568    tctcctcttccatcatctgg 587
              ||||||||||||||||||||
Sbjct: 187173 tctcctcttccatcatctgg 187154
to top
>emb|AL773513.3| Mouse DNA sequence from clone RP24-535M24 on chromosome 4 Contains the
             5' end of the Tle1 gene for transducin-like enhancer of
             split 1 homolog of Drosophila E(spl), two novel genes and
             a CpG island, complete sequence
          Length = 121919

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 61    caaaaacaaaactagaaagc 80
             ||||||||||||||||||||
Sbjct: 29482 caaaaacaaaactagaaagc 29501
to top
>emb|BX663604.9| Zebrafish DNA sequence from clone CH211-222K9 in linkage group 7,
              complete sequence
          Length = 161194

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 59     ttcaaaaacaaaactagaaa 78
              ||||||||||||||||||||
Sbjct: 131578 ttcaaaaacaaaactagaaa 131597
to top
>gb|DP000040.1| Otolemur garnettii target 106 genomic scaffold
          Length = 277620

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 374    gtccagatcttacaggttggaagg 397
              |||||||||||||| |||||||||
Sbjct: 107386 gtccagatcttacaagttggaagg 107363
to top
>emb|AL844152.9| Zebrafish DNA sequence from clone DKEY-37L7, complete sequence
          Length = 180395

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 463    actcattcttaacatgcatg 482
              ||||||||||||||||||||
Sbjct: 130439 actcattcttaacatgcatg 130458
to top
>gb|AC145041.3| Macropus eugenii clone ME_KBa-210M21, complete sequence
          Length = 137667

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 68    aaaactagaaagcaatctag 87
             ||||||||||||||||||||
Sbjct: 50788 aaaactagaaagcaatctag 50807
to top
>gb|AC155715.24| Mus musculus 10 BAC RP24-118H2 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 174860

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 63     aaaacaaaactagaaagcaa 82
              ||||||||||||||||||||
Sbjct: 127945 aaaacaaaactagaaagcaa 127964


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,292,678
Number of Sequences: 3902068
Number of extensions: 6292678
Number of successful extensions: 121290
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 121129
Number of HSP's gapped (non-prelim): 161
length of query: 632
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 609
effective length of database: 17,143,297,704
effective search space: 10440268301736
effective search space used: 10440268301736
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top