>HMB1_TRIGR (P09080) Homeobox protein HB1 (TGHBOX1) (Fragment)|
          Length = 307

 Score = 30.0 bits (66), Expect = 7.2
 Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
 Frame = -3

Query: 496 ASGLGKQRFRGRLTA--AGSSLYVHTTSTVSRDHLGRLFSPCK 374
           A+ LG   +RGR+ A  AG+   V   +  + +H  ++ SPCK
Sbjct: 126 AAELGDGSYRGRVNALAAGTGCLVSAAAEPNNNHCSQVMSPCK 168

>SOX3_MOUSE (P53784) Transcription factor SOX-3|
          Length = 375

 Score = 29.6 bits (65), Expect = 9.4
 Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 6/56 (10%)
 Frame = -2

Query: 308 WPPAAYELN*ILMRQDGTSQSQHAPALSSPLPTDGLPLLHYY------YFPSLPTG 159
           W   AY L   +  Q G +Q    P++SSP P   LP +H Y      Y P +P G
Sbjct: 196 WANGAYSL---VQEQLGYAQP---PSMSSPPPPPALPQMHRYDMAGLQYSPMMPPG 245

>GUAC_LACAC (Q5FHY3) GMP reductase (EC 1.7.1.7) (Guanosine 5'-monophosphate|
           oxidoreductase) (Guanosine monophosphate reductase)
          Length = 330

 Score = 29.6 bits (65), Expect = 9.4
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +2

Query: 407 TGYCTGGMYVQARACCCEPASEPLLAQSG 493
           TG+ TGG  + A   C + AS+PL+A  G
Sbjct: 186 TGFGTGGWQLAALRMCSKVASKPLIADGG 214

>Y681_PYRAE (Q8ZYP4) UPF0179 protein PAE0681|
          Length = 167

 Score = 29.6 bits (65), Expect = 9.4
 Identities = 9/17 (52%), Positives = 14/17 (82%)
 Frame = +2

Query: 629 YLLPPECQDCQWWPVCM 679
           + +P EC+DC+ +PVCM
Sbjct: 22  FSIPEECKDCRLYPVCM 38


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 99,553,985
Number of Sequences: 219361
Number of extensions: 2046756
Number of successful extensions: 5658
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5352
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5653
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7139613222
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)