ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbaal5c22 |
|---|---|
| Clone Library Name | barley_pub |
>2ABB_ARATH (Q39247) Serine/threonine protein phosphatase 2A 55 kDa regulatory| subunit B beta isoform (PP2A, subunit B, beta isoform) (AtB beta) Length = 501 Score = 54.3 bits (129), Expect = 3e-07 Identities = 22/24 (91%), Positives = 23/24 (95%) Frame = -2 Query: 659 HLAWHPTENSIACAAGNSLYMYYA 588 H+AWHPTENSIACAA NSLYMYYA Sbjct: 478 HMAWHPTENSIACAAANSLYMYYA 501
>2ABA_ARATH (Q38821) Serine/threonine protein phosphatase 2A 55 kDa regulatory| subunit B alpha isoform (PP2A, subunit B, alpha isoform) (AtB alpha) Length = 513 Score = 53.1 bits (126), Expect = 7e-07 Identities = 22/24 (91%), Positives = 22/24 (91%) Frame = -2 Query: 659 HLAWHPTENSIACAAGNSLYMYYA 588 HLAWHP ENSIACAA NSLYMYYA Sbjct: 490 HLAWHPNENSIACAAANSLYMYYA 513
>2ABA_CANTR (P53031) Protein phosphatase PP2A regulatory subunit B (PR55) (Cell| division control protein 55) Length = 508 Score = 38.1 bits (87), Expect = 0.023 Identities = 14/22 (63%), Positives = 19/22 (86%) Frame = -2 Query: 659 HLAWHPTENSIACAAGNSLYMY 594 HL+WHP ENS+A AA N+LY++ Sbjct: 484 HLSWHPRENSVAIAATNNLYIF 505
>2ABB_RABIT (Q00006) Serine/threonine-protein phosphatase 2A 55 kDa regulatory| subunit B beta isoform (PP2A, subunit B, B-beta isoform) (PP2A, subunit B, B55-beta isoform) (PP2A, subunit B, PR55-beta isoform) (PP2A, subunit B, R2-beta isoform) (Fragment) Length = 413 Score = 36.2 bits (82), Expect = 0.089 Identities = 14/22 (63%), Positives = 18/22 (81%) Frame = -2 Query: 659 HLAWHPTENSIACAAGNSLYMY 594 H AWHP+EN IA AA N+LY++ Sbjct: 387 HTAWHPSENIIAVAATNNLYIF 408
>2ABB_RAT (P36877) Serine/threonine-protein phosphatase 2A 55 kDa regulatory| subunit B beta isoform (PP2A, subunit B, B-beta isoform) (PP2A, subunit B, B55-beta isoform) (PP2A, subunit B, PR55-beta isoform) (PP2A, subunit B, R2-beta isoform) (PP2A, subuni Length = 443 Score = 36.2 bits (82), Expect = 0.089 Identities = 14/22 (63%), Positives = 18/22 (81%) Frame = -2 Query: 659 HLAWHPTENSIACAAGNSLYMY 594 H AWHP+EN IA AA N+LY++ Sbjct: 417 HTAWHPSENIIAVAATNNLYIF 438
>2ABB_PONPY (Q5R4A2) Serine/threonine-protein phosphatase 2A 55 kDa regulatory| subunit B beta isoform (PP2A, subunit B, B-beta isoform) (PP2A, subunit B, B55-beta isoform) (PP2A, subunit B, PR55-beta isoform) (PP2A, subunit B, R2-beta isoform) Length = 443 Score = 36.2 bits (82), Expect = 0.089 Identities = 14/22 (63%), Positives = 18/22 (81%) Frame = -2 Query: 659 HLAWHPTENSIACAAGNSLYMY 594 H AWHP+EN IA AA N+LY++ Sbjct: 417 HTAWHPSENIIAVAATNNLYIF 438
>2ABB_PIG (P54614) Serine/threonine-protein phosphatase 2A 55 kDa regulatory| subunit B beta isoform (PP2A, subunit B, B-beta isoform) (PP2A, subunit B, B55-beta isoform) (PP2A, subunit B, PR55-beta isoform) (PP2A, subunit B, R2-beta isoform) Length = 443 Score = 36.2 bits (82), Expect = 0.089 Identities = 14/22 (63%), Positives = 18/22 (81%) Frame = -2 Query: 659 HLAWHPTENSIACAAGNSLYMY 594 H AWHP+EN IA AA N+LY++ Sbjct: 417 HTAWHPSENIIAVAATNNLYIF 438
>2ABB_MOUSE (Q6ZWR4) Serine/threonine-protein phosphatase 2A 55 kDa regulatory| subunit B beta isoform (PP2A, subunit B, B-beta isoform) (PP2A, subunit B, B55-beta isoform) (PP2A, subunit B, PR55-beta isoform) (PP2A, subunit B, R2-beta isoform) Length = 443 Score = 36.2 bits (82), Expect = 0.089 Identities = 14/22 (63%), Positives = 18/22 (81%) Frame = -2 Query: 659 HLAWHPTENSIACAAGNSLYMY 594 H AWHP+EN IA AA N+LY++ Sbjct: 417 HTAWHPSENIIAVAATNNLYIF 438
>2ABB_MACFA (Q4R8L3) Serine/threonine-protein phosphatase 2A 55 kDa regulatory| subunit B beta isoform (PP2A, subunit B, B-beta isoform) (PP2A, subunit B, B55-beta isoform) (PP2A, subunit B, PR55-beta isoform) (PP2A, subunit B, R2-beta isoform) Length = 443 Score = 36.2 bits (82), Expect = 0.089 Identities = 14/22 (63%), Positives = 18/22 (81%) Frame = -2 Query: 659 HLAWHPTENSIACAAGNSLYMY 594 H AWHP+EN IA AA N+LY++ Sbjct: 417 HTAWHPSENIIAVAATNNLYIF 438
>2ABB_HUMAN (Q00005) Serine/threonine-protein phosphatase 2A 55 kDa regulatory| subunit B beta isoform (PP2A, subunit B, B-beta isoform) (PP2A, subunit B, B55-beta isoform) (PP2A, subunit B, PR55-beta isoform) (PP2A, subunit B, R2-beta isoform) Length = 443 Score = 36.2 bits (82), Expect = 0.089 Identities = 14/22 (63%), Positives = 18/22 (81%) Frame = -2 Query: 659 HLAWHPTENSIACAAGNSLYMY 594 H AWHP+EN IA AA N+LY++ Sbjct: 417 HTAWHPSENIIAVAATNNLYIF 438
>2ABA_YEAST (Q00362) Protein phosphatase PP2A regulatory subunit B (PR55) (Cell| division control protein 55) Length = 526 Score = 36.2 bits (82), Expect = 0.089 Identities = 14/24 (58%), Positives = 19/24 (79%) Frame = -2 Query: 659 HLAWHPTENSIACAAGNSLYMYYA 588 H +WHP ENSIA AA N+L+++ A Sbjct: 502 HFSWHPRENSIAVAATNNLFIFSA 525
>VPX_SIVM1 (P05917) VPX protein (X ORF protein)| Length = 112 Score = 35.8 bits (81), Expect = 0.12 Identities = 20/46 (43%), Positives = 24/46 (52%) Frame = -2 Query: 551 LCNVKASALHMQPEKWCRTLSSIL*LGVGRGGWHPGDGYPPTPSIA 414 LC ++ AL M +K CR L G G GGW PG PP P +A Sbjct: 72 LCLIQ-KALFMHCKKGCRCLGE----GHGAGGWRPGPPPPPPPGLA 112
>2ABG_RAT (P97888) Serine/threonine-protein phosphatase 2A 55 kDa regulatory| subunit B gamma isoform (PP2A, subunit B, B-gamma isoform) (PP2A, subunit B, B55-gamma isoform) (PP2A, subunit B, PR55-gamma isoform) (PP2A, subunit B, R2-gamma isoform) (PP2A, s Length = 447 Score = 35.8 bits (81), Expect = 0.12 Identities = 14/22 (63%), Positives = 17/22 (77%) Frame = -2 Query: 659 HLAWHPTENSIACAAGNSLYMY 594 H AWHP EN IA AA N+LY++ Sbjct: 417 HTAWHPAENIIAIAATNNLYIF 438
>2ABG_RABIT (P50410) Serine/threonine-protein phosphatase 2A 55 kDa regulatory| subunit B gamma isoform (PP2A, subunit B, B-gamma isoform) (PP2A, subunit B, B55-gamma isoform) (PP2A, subunit B, PR55-gamma isoform) (PP2A, subunit B, R2-gamma isoform) Length = 447 Score = 35.8 bits (81), Expect = 0.12 Identities = 14/22 (63%), Positives = 17/22 (77%) Frame = -2 Query: 659 HLAWHPTENSIACAAGNSLYMY 594 H AWHP EN IA AA N+LY++ Sbjct: 417 HTAWHPAENIIAIAATNNLYIF 438
>2ABG_MOUSE (Q8BG02) Serine/threonine-protein phosphatase 2A 55 kDa regulatory| subunit B gamma isoform (PP2A, subunit B, B-gamma isoform) (PP2A, subunit B, B55-gamma isoform) (PP2A, subunit B, PR55-gamma isoform) (PP2A, subunit B, R2-gamma isoform) Length = 447 Score = 35.8 bits (81), Expect = 0.12 Identities = 14/22 (63%), Positives = 17/22 (77%) Frame = -2 Query: 659 HLAWHPTENSIACAAGNSLYMY 594 H AWHP EN IA AA N+LY++ Sbjct: 417 HTAWHPAENIIAIAATNNLYIF 438
>2ABG_MACFA (Q95LP0) Serine/threonine-protein phosphatase 2A 55 kDa regulatory| subunit B gamma isoform (PP2A, subunit B, B-gamma isoform) (PP2A, subunit B, B55-gamma isoform) (PP2A, subunit B, PR55-gamma isoform) (PP2A, subunit B, R2-gamma isoform) Length = 447 Score = 35.8 bits (81), Expect = 0.12 Identities = 14/22 (63%), Positives = 17/22 (77%) Frame = -2 Query: 659 HLAWHPTENSIACAAGNSLYMY 594 H AWHP EN IA AA N+LY++ Sbjct: 417 HTAWHPAENIIAIAATNNLYIF 438
>2ABG_HUMAN (Q9Y2T4) Serine/threonine-protein phosphatase 2A 55 kDa regulatory| subunit B gamma isoform (PP2A, subunit B, B-gamma isoform) (PP2A, subunit B, B55-gamma isoform) (PP2A, subunit B, PR55-gamma isoform) (PP2A, subunit B, R2-gamma isoform) (IMYPN Length = 447 Score = 35.8 bits (81), Expect = 0.12 Identities = 14/22 (63%), Positives = 17/22 (77%) Frame = -2 Query: 659 HLAWHPTENSIACAAGNSLYMY 594 H AWHP EN IA AA N+LY++ Sbjct: 417 HTAWHPAENIIAIAATNNLYIF 438
>2ABD_CHICK (Q5ZIY5) Serine/threonine-protein phosphatase 2A 55 kDa regulatory| subunit B delta isoform (PP2A, subunit B, B-delta isoform) (PP2A, subunit B, B55-delta isoform) (PP2A, subunit B, PR55-delta isoform) (PP2A, subunit B, R2-delta isoform) Length = 451 Score = 35.4 bits (80), Expect = 0.15 Identities = 14/22 (63%), Positives = 17/22 (77%) Frame = -2 Query: 659 HLAWHPTENSIACAAGNSLYMY 594 H AWHP EN IA AA N+LY++ Sbjct: 425 HTAWHPMENIIAVAATNNLYIF 446
>2ABD_HUMAN (Q66LE6) Serine/threonine-protein phosphatase 2A 55 kDa regulatory| subunit B delta isoform (PP2A, subunit B, B-delta isoform) (PP2A, subunit B, B55-delta isoform) (PP2A, subunit B, PR55-delta isoform) (PP2A, subunit B, R2-delta isoform) Length = 453 Score = 34.7 bits (78), Expect = 0.26 Identities = 13/22 (59%), Positives = 17/22 (77%) Frame = -2 Query: 659 HLAWHPTENSIACAAGNSLYMY 594 H AWHP +N IA AA N+LY++ Sbjct: 427 HTAWHPVDNVIAVAATNNLYIF 448
>2ABA_DROME (P36872) Protein phosphatase PP2A 55 kDa regulatory subunit| (Protein phosphatase PP2A regulatory subunit B) (PR55) (Twins protein) Length = 499 Score = 33.9 bits (76), Expect = 0.44 Identities = 13/22 (59%), Positives = 17/22 (77%) Frame = -2 Query: 659 HLAWHPTENSIACAAGNSLYMY 594 H AWHP EN IA AA N+L+++ Sbjct: 474 HTAWHPEENIIAVAATNNLFIF 495
>2ABA_RAT (P36876) Serine/threonine-protein phosphatase 2A 55 kDa regulatory| subunit B alpha isoform (PP2A, subunit B, B-alpha isoform) (PP2A, subunit B, B55-alpha isoform) (PP2A, subunit B, PR55-alpha isoform) (PP2A, subunit B, R2-alpha isoform) (PP2A, s Length = 447 Score = 33.9 bits (76), Expect = 0.44 Identities = 13/22 (59%), Positives = 16/22 (72%) Frame = -2 Query: 659 HLAWHPTENSIACAAGNSLYMY 594 H AWHP EN IA A N+LY++ Sbjct: 421 HTAWHPKENIIAVATTNNLYIF 442
>2ABA_RABIT (P63150) Serine/threonine-protein phosphatase 2A 55 kDa regulatory| subunit B alpha isoform (PP2A, subunit B, B-alpha isoform) (PP2A, subunit B, B55-alpha isoform) (PP2A, subunit B, PR55-alpha isoform) (PP2A, subunit B, R2-alpha isoform) Length = 447 Score = 33.9 bits (76), Expect = 0.44 Identities = 13/22 (59%), Positives = 16/22 (72%) Frame = -2 Query: 659 HLAWHPTENSIACAAGNSLYMY 594 H AWHP EN IA A N+LY++ Sbjct: 421 HTAWHPKENIIAVATTNNLYIF 442
>2ABA_MOUSE (Q6P1F6) Serine/threonine-protein phosphatase 2A 55 kDa regulatory| subunit B alpha isoform (PP2A, subunit B, B-alpha isoform) (PP2A, subunit B, B55-alpha isoform) (PP2A, subunit B, PR55-alpha isoform) (PP2A, subunit B, R2-alpha isoform) Length = 447 Score = 33.9 bits (76), Expect = 0.44 Identities = 13/22 (59%), Positives = 16/22 (72%) Frame = -2 Query: 659 HLAWHPTENSIACAAGNSLYMY 594 H AWHP EN IA A N+LY++ Sbjct: 421 HTAWHPKENIIAVATTNNLYIF 442
>2ABA_MACFA (Q4R7Z4) Serine/threonine-protein phosphatase 2A 55 kDa regulatory| subunit B alpha isoform (PP2A, subunit B, B-alpha isoform) (PP2A, subunit B, B55-alpha isoform) (PP2A, subunit B, PR55-alpha isoform) (PP2A, subunit B, R2-alpha isoform) Length = 447 Score = 33.9 bits (76), Expect = 0.44 Identities = 13/22 (59%), Positives = 16/22 (72%) Frame = -2 Query: 659 HLAWHPTENSIACAAGNSLYMY 594 H AWHP EN IA A N+LY++ Sbjct: 421 HTAWHPKENIIAVATTNNLYIF 442
>2ABA_HUMAN (P63151) Serine/threonine-protein phosphatase 2A 55 kDa regulatory| subunit B alpha isoform (PP2A, subunit B, B-alpha isoform) (PP2A, subunit B, B55-alpha isoform) (PP2A, subunit B, PR55-alpha isoform) (PP2A, subunit B, R2-alpha isoform) Length = 447 Score = 33.9 bits (76), Expect = 0.44 Identities = 13/22 (59%), Positives = 16/22 (72%) Frame = -2 Query: 659 HLAWHPTENSIACAAGNSLYMY 594 H AWHP EN IA A N+LY++ Sbjct: 421 HTAWHPKENIIAVATTNNLYIF 442
>2ABA_PIG (Q29090) Serine/threonine-protein phosphatase 2A 55 kDa regulatory| subunit B alpha isoform (PP2A, subunit B, B-alpha isoform) (PP2A, subunit B, B55-alpha isoform) (PP2A, subunit B, PR55-alpha isoform) (PP2A, subunit B, R2-alpha isoform) (Fragmen Length = 426 Score = 33.9 bits (76), Expect = 0.44 Identities = 13/22 (59%), Positives = 16/22 (72%) Frame = -2 Query: 659 HLAWHPTENSIACAAGNSLYMY 594 H AWHP EN IA A N+LY++ Sbjct: 400 HTAWHPKENIIAVATTNNLYIF 421
>2ABD_RAT (P56932) Serine/threonine-protein phosphatase 2A 55 kDa regulatory| subunit B delta isoform (PP2A, subunit B, B-delta isoform) (PP2A, subunit B, B55-delta isoform) (PP2A, subunit B, PR55-delta isoform) (PP2A, subunit B, R2-delta isoform) Length = 453 Score = 33.5 bits (75), Expect = 0.58 Identities = 13/22 (59%), Positives = 17/22 (77%) Frame = -2 Query: 659 HLAWHPTENSIACAAGNSLYMY 594 H AWHP E+ IA AA N+LY++ Sbjct: 427 HTAWHPMESIIAVAATNNLYIF 448
>2ABD_MOUSE (Q925E7) Serine/threonine-protein phosphatase 2A 55 kDa regulatory| subunit B delta isoform (PP2A, subunit B, B-delta isoform) (PP2A, subunit B, B55-delta isoform) (PP2A, subunit B, PR55-delta isoform) (PP2A, subunit B, R2-delta isoform) Length = 453 Score = 33.5 bits (75), Expect = 0.58 Identities = 13/22 (59%), Positives = 17/22 (77%) Frame = -2 Query: 659 HLAWHPTENSIACAAGNSLYMY 594 H AWHP E+ IA AA N+LY++ Sbjct: 427 HTAWHPMESIIAVAATNNLYIF 448
>BIOD_CHLPN (Q9Z6L7) Dethiobiotin synthetase (EC 6.3.3.3) (Dethiobiotin| synthase) (DTB synthetase) (DTBS) Length = 219 Score = 33.5 bits (75), Expect = 0.58 Identities = 12/23 (52%), Positives = 15/23 (65%) Frame = +1 Query: 487 DDNVLHHFSGCMCKAEAFTLHKP 555 D N++H SG C EA+ LHKP Sbjct: 43 DSNIVHELSGAYCHPEAYRLHKP 65
>VPX_SIVSP (P19508) VPX protein (X ORF protein)| Length = 112 Score = 32.0 bits (71), Expect = 1.7 Identities = 18/46 (39%), Positives = 23/46 (50%) Frame = -2 Query: 551 LCNVKASALHMQPEKWCRTLSSIL*LGVGRGGWHPGDGYPPTPSIA 414 LC ++ A+ M +K CR L G GGW PG PP P +A Sbjct: 72 LCLIQ-KAMFMHCKKGCRCLGG----EHGAGGWRPGPPPPPPPGLA 112
>VPX_SIVML (P11266) VPX protein (X ORF protein)| Length = 112 Score = 32.0 bits (71), Expect = 1.7 Identities = 17/39 (43%), Positives = 19/39 (48%) Frame = -2 Query: 530 ALHMQPEKWCRTLSSIL*LGVGRGGWHPGDGYPPTPSIA 414 AL M +K CR L G GGW PG PP P +A Sbjct: 78 ALFMHCKKGCRCLGE----GHRAGGWRPGPPPPPPPGLA 112
>VPX_SIVMK (P05916) VPX protein (X ORF protein)| Length = 112 Score = 32.0 bits (71), Expect = 1.7 Identities = 17/39 (43%), Positives = 19/39 (48%) Frame = -2 Query: 530 ALHMQPEKWCRTLSSIL*LGVGRGGWHPGDGYPPTPSIA 414 AL M +K CR L G GGW PG PP P +A Sbjct: 78 ALFMHCKKGCRCLGE----GHRAGGWRPGPPPPPPPGLA 112
>VPX_HV2RO (P06939) VPX protein (X ORF protein) (Viral accessory protein)| Length = 112 Score = 31.2 bits (69), Expect = 2.9 Identities = 17/45 (37%), Positives = 22/45 (48%) Frame = -2 Query: 551 LCNVKASALHMQPEKWCRTLSSIL*LGVGRGGWHPGDGYPPTPSI 417 LC ++ A++M K C L G G GGW PG PP P + Sbjct: 72 LCIIQ-KAVYMHVRKGCTCLGR----GHGPGGWRPGPPPPPPPGL 111
>VPX_HV2D1 (P17760) VPX protein (X ORF protein) (Viral accessory protein)| Length = 112 Score = 29.6 bits (65), Expect = 8.3 Identities = 15/50 (30%), Positives = 23/50 (46%) Frame = -2 Query: 566 FTVFGLCNVKASALHMQPEKWCRTLSSIL*LGVGRGGWHPGDGYPPTPSI 417 +T + + A+++ +K C L G G GGW PG PP P + Sbjct: 66 YTKYRYLCIMQKAVYIHFKKGCTCLGR----GHGPGGWRPGPPPPPPPGL 111
>ROL6_CAEEL (P20784) Cuticle collagen rol-6 (Protein roller-6)| Length = 348 Score = 29.6 bits (65), Expect = 8.3 Identities = 11/16 (68%), Positives = 12/16 (75%) Frame = +1 Query: 430 GGYPSPGCQPPLPTPN 477 GGY + G QPP PTPN Sbjct: 75 GGYGATGVQPPAPTPN 90
>GRK4_RAT (P70507) G protein-coupled receptor kinase 4 (EC 2.7.11.16) (G| protein-coupled receptor kinase GRK4) Length = 575 Score = 29.6 bits (65), Expect = 8.3 Identities = 13/36 (36%), Positives = 24/36 (66%) Frame = +2 Query: 188 WLNLARRHYITLDEEKRKFLTSTVSRYFLGPSEIRI 295 +L+ A + +T++EE+R+F S SR+F SE+ + Sbjct: 82 FLDAAAEYEVTIEEEQREFGLSIYSRFFKENSEVSL 117 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 106,281,476 Number of Sequences: 219361 Number of extensions: 2338130 Number of successful extensions: 5750 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 5453 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5750 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6314008338 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
