Clone Name	rbaak35d19
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	gb|AY342358.1| Triticum aestivum histidine-containing phosphotra...	502	e-139
2	tpg|BK005645.1| TPA: TPA_inf: Triticum aestivum histidine-contai...	498	e-137
3	tpg|BK005644.1| TPA: TPA_inf: Triticum aestivum histidine-contai...	486	e-134
4	gb|AY345241.1| Oryza sativa (japonica cultivar-group) two-compon...	147	4e-32
5	dbj|AK104879.1| Oryza sativa (japonica cultivar-group) cDNA clon...	147	4e-32
6	dbj|AK072521.1| Oryza sativa (japonica cultivar-group) cDNA clon...	147	4e-32
7	gb|AY109580.1| Zea mays CL1301_1 mRNA sequence	147	4e-32
8	dbj|AB024292.1| Zea mays ZmHP2 mRNA for histidine-containing pho...	147	4e-32
9	ref|XM_483752.1| Oryza sativa (japonica cultivar-group), mRNA	76	1e-10
10	gb|AY345242.1| Oryza sativa (japonica cultivar-group) two-compon...	76	1e-10
11	dbj|AK061111.1| Oryza sativa (japonica cultivar-group) cDNA clon...	76	1e-10
12	gb|AY569613.1| Oryza sativa (japonica cultivar-group) histidine-...	74	5e-10
13	gb|AY581257.1| Oryza sativa (japonica cultivar-group) histidine-...	68	3e-08
14	dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D...	60	8e-06
15	dbj|AP005558.3| Oryza sativa (japonica cultivar-group) genomic D...	60	8e-06
16	gb|AY019830.1| Oryza sativa microsatellite MRG2155 containing (C...	46	0.12
17	dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D...	46	0.12
18	dbj|AP003928.3| Oryza sativa (japonica cultivar-group) genomic D...	46	0.12
19	emb|BX511313.20| Mouse DNA sequence from clone RP24-391O14 on ch...	44	0.47
20	gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome	42	1.8
21	emb|AL359195.24| Human DNA sequence from clone RP11-36D19 on chr...	42	1.8
22	gb|AC021028.12| Homo sapiens chromosome 10 clone RP11-137H2, com...	42	1.8
23	dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co...	42	1.8
24	gb|AC004038.1| Homo sapiens chromosome 5, BAC clone 8k5, BAC 500...	40	7.3
25	gb|AC135497.3| Oryza sativa (japonica cultivar-group) chromosome...	40	7.3
26	gb|AC114621.8| Mus musculus chromosome 3, clone RP24-93M7, compl...	40	7.3
27	gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, comp...	40	7.3
28	gb|AC163218.5| Mus musculus chromosome 7, clone RP24-102H24, com...	40	7.3
29	gb|AC076968.38| Homo sapiens 12 BAC RP11-686F15 (Roswell Park Ca...	40	7.3
30	gb|AC110574.9| Mus musculus chromosome 3, clone RP23-324B15, com...	40	7.3
31	emb|AL162456.14| Human DNA sequence from clone RP11-95C14 on chr...	40	7.3
32	gb|AY152826.1| Felis catus clone BAC 102h1 major histocompatibli...	40	7.3
33	emb|BX569693.1| Synechococcus sp. WH8102 complete genome; segmen...	40	7.3
34	gb|AC113115.17| Mus musculus chromosome 7, clone RP23-338L5, com...	40	7.3
35	gb|AC100834.3| Homo sapiens chromosome 15, clone CTD-2125J1, com...	40	7.3
36	dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ...	40	7.3
37	gb|AC008588.8| Homo sapiens chromosome 5 clone CTC-573M9, comple...	40	7.3
38	gb|AC012271.11| Homo sapiens chromosome 15, clone RP11-64O3, com...	40	7.3
39	dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D...	40	7.3
40	gb|AC151330.2| Xenopus tropicalis clone ISB-299I17, complete seq...	40	7.3
41	gb|AF546152.1| Streptomyces sp. 100/Eco52 UnbL (unbL), UnbV (unb...	40	7.3
42	gb|AC108171.3| Homo sapiens chromosome X clone RP11-468J11, RP11...	40	7.3
43	gb|AF274857.3| Homo sapiens chromosome X clone CTD-2011N23 map q...	40	7.3
44	gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome...	40	7.3
45	emb|AL611929.2| Human DNA sequence from clone RP11-3C9 on chromo...	40	7.3

---

>gb|AY342358.1| Triticum aestivum histidine-containing phosphotransfer protein
           mRNA, complete cds
          Length = 775

 Score =  502 bits (253), Expect = e-139
 Identities = 327/351 (93%), Gaps = 7/351 (1%)
 Strand = Plus / Minus

                                                                       
Query: 188 ccatcatgtcaggggtcacatggag----ctaagctccttctgcttcagtttttactgct 243
           |||||||||||||||||||||||||    ||||||||||| |||||| |||   ||||||
Sbjct: 542 ccatcatgtcaggggtcacatggagggagctaagctccttttgcttcggtt---actgct 486

                                                                       
Query: 244 actctacttgggactgcaggcctcgatctgctgccccagctgcatcatggtctggaactt 303
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 485 actctacttgggactgcaggcctcgatctgctgctccagctgcatcatggtctggaactt 426

                                                                       
Query: 304 gctgcgcacatcacagaactcactcctaacaagggccaacgccatgaggcacccatcttt 363
           | ||||||||||||||||||||||||||||||| |||| ||||||||||||||| |||||
Sbjct: 425 gttgcgcacatcacagaactcactcctaacaagagccagcgccatgaggcacccttcttt 366

                                                                       
Query: 364 actttttgcctcatagaactggcggaagtgcatgcaggcgagcttcactttctgagcgcc 423
            |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 365 gctttttgcctcataaaactggcggaagtgcatgcaggcgagcttcactttctgagcacc 306

                                                                       
Query: 424 aacactggagctgctccccttgagctggtgcacgtgcgcgtccaccttgtcgaagtccac 483
           |||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 305 aacactcgagctgctccccttgagctggtgcacgtgggcgtccaccttgtcgaaatccac 246

                                                              
Query: 484 ggcgggctggtccagcagggcggcgatgtcggngatgatccggtcggcgtc 534
             | |||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 245 caccggctggtccagcagggcggcgatgtcggcgatgatccggtcggcgtc 195



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 48/53 (90%)
 Strand = Plus / Minus

                                                                
Query: 59  caagttccgtttcaaggggtcgcgagcccggagttccaccgctggaatcggtc 111
           ||||||| |||||||||||||||||||| || ||||| |||| ||||||||||
Sbjct: 681 caagttctgtttcaaggggtcgcgagcctggggttccgccgcgggaatcggtc 629

---

>tpg|BK005645.1| TPA: TPA_inf: Triticum aestivum histidine-containing
           phosphotransfer protein 3 (HP) mRNA, complete cds
          Length = 931

 Score =  498 bits (251), Expect = e-137
 Identities = 315/336 (93%), Gaps = 3/336 (0%)
 Strand = Plus / Minus

                                                                       
Query: 199 ggggtcacatggagctaagctccttctgcttcagtttttactgctactctacttgggact 258
           ||||||||||||||||||||||||| |||||||||    |||||||||||||||||||||
Sbjct: 625 ggggtcacatggagctaagctccttttgcttcagtg---actgctactctacttgggact 569

                                                                       
Query: 259 gcaggcctcgatctgctgccccagctgcatcatggtctggaacttgctgcgcacatcaca 318
           ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct: 568 gcaggcctcgatctgctgctccagctgcatcatggtctggaacttgttgcgcacatcaca 509

                                                                       
Query: 319 gaactcactcctaacaagggccaacgccatgaggcacccatctttactttttgcctcata 378
           |||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 508 gaactcactcctaacaagagccaacgccatgaggcacccttctttgctttttgcctcata 449

                                                                       
Query: 379 gaactggcggaagtgcatgcaggcgagcttcactttctgagcgccaacactggagctgct 438
           |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 448 gaactggcggaagtgcatgcaggcgagcttcactttctgagcaccaacactcgagctgct 389

                                                                       
Query: 439 ccccttgagctggtgcacgtgcgcgtccaccttgtcgaagtccacggcgggctggtccag 498
           ||||||||||||||||||||| ||||||||||||||||| |||||  |||||||||||||
Sbjct: 388 ccccttgagctggtgcacgtgggcgtccaccttgtcgaaatccaccacgggctggtccag 329

                                               
Query: 499 cagggcggcgatgtcggngatgatccggtcggcgtc 534
           ||||    ||||||||| ||||||||||||||||||
Sbjct: 328 caggctcccgatgtcggcgatgatccggtcggcgtc 293

---

>tpg|BK005644.1| TPA: TPA_inf: Triticum aestivum histidine-containing
           phosphotransfer protein 2 (HP) mRNA, complete cds
          Length = 1212

 Score =  486 bits (245), Expect = e-134
 Identities = 328/355 (92%), Gaps = 7/355 (1%)
 Strand = Plus / Minus

                                                                       
Query: 188 ccatcatgtcaggggtcacatggag----ctaagctccttctgcttcagtttttactgct 243
           |||||||||||||||||||| ||||    ||||||||||| ||||||||||   ||||||
Sbjct: 964 ccatcatgtcaggggtcacacggagggagctaagctccttttgcttcagtt---actgct 908

                                                                       
Query: 244 actctacttgggactgcaggcctcgatctgctgccccagctgcatcatggtctggaactt 303
           ||||||||| |||||||| ||||||||||||||| |||||||||||||||||||||||||
Sbjct: 907 actctacttcggactgcacgcctcgatctgctgctccagctgcatcatggtctggaactt 848

                                                                       
Query: 304 gctgcgcacatcacagaactcactcctaacaagggccaacgccatgaggcacccatcttt 363
           | ||||||||||||||||||| ||||||||||| |||| ||||||||||||||| |||||
Sbjct: 847 gttgcgcacatcacagaactcgctcctaacaagagccagcgccatgaggcacccttcttt 788

                                                                       
Query: 364 actttttgcctcatagaactggcggaagtgcatgcaggcgagcttcactttctgagcgcc 423
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 787 gctttttgcctcatagaactggcggaagtgcatgcaggcgagcttcactttctgagcacc 728

                                                                       
Query: 424 aacactggagctgctccccttgagctggtgcacgtgcgcgtccaccttgtcgaagtccac 483
           |||||| ||||||||||||||||||||||||||||| |||||||||||||| || |||||
Sbjct: 727 aacactcgagctgctccccttgagctggtgcacgtgggcgtccaccttgtcaaaatccac 668

                                                                  
Query: 484 ggcgggctggtccagcagggcggcgatgtcggngatgatccggtcggcgtcttcg 538
             | |||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 667 caccggctggtccagcagggcggcgatgtcggcgatgatccggtcggcgtcttcg 613



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 50/54 (92%), Gaps = 1/54 (1%)
 Strand = Plus / Minus

                                                                  
Query: 59   caagttccgtttcaagggg-tcgcgagcccggagttccaccgctggaatcggtc 111
            ||||||||||| ||||||| |||||||||||||||||| |||| ||||||||||
Sbjct: 1103 caagttccgttccaagggggtcgcgagcccggagttccgccgcgggaatcggtc 1050

---

>gb|AY345241.1| Oryza sativa (japonica cultivar-group) two-component phosphorelay
           mediator HP1 mRNA, complete cds
          Length = 450

 Score =  147 bits (74), Expect = 4e-32
 Identities = 226/277 (81%)
 Strand = Plus / Minus

                                                                       
Query: 263 gcctcgatctgctgccccagctgcatcatggtctggaacttgctgcgcacatcacagaac 322
           |||| ||| |||||| ||||||| | ||| ||||| |||||| |||||| |||| |||| 
Sbjct: 428 gcctggatttgctgctccagctgaagcatagtctgaaacttgttgcgcagatcatagaag 369

                                                                       
Query: 323 tcactcctaacaagggccaacgccatgaggcacccatctttactttttgcctcatagaac 382
           ||  | || ||||  ||||| ||||| |||||||||||| | |||||  ||| | |||||
Sbjct: 368 tcgtttctcacaacagccaatgccataaggcacccatctctgcttttgtcctgacagaac 309

                                                                       
Query: 383 tggcggaagtgcatgcaggcgagcttcactttctgagcgccaacactggagctgctcccc 442
           || ||||| |||||||| | || ||||||||||||||| |||||||||| |||||| || 
Sbjct: 308 tgacggaactgcatgcaagtgaacttcactttctgagcaccaacactggcgctgctgcct 249

                                                                       
Query: 443 ttgagctggtgcacgtgcgcgtccaccttgtcgaagtccacggcgggctggtccagcagg 502
           |||||||| || ||||  ||||| ||||| |||||||  ||| |||| || |||||||||
Sbjct: 248 ttgagctgatgaacgtaggcgtcgaccttatcgaagttgacgacgggttgctccagcagg 189

                                                
Query: 503 gcggcgatgtcggngatgatccggtcggcgtcttcgc 539
           | |||||| |||  |||||||| ||||||||| ||||
Sbjct: 188 gtggcgatctcgttgatgatcctgtcggcgtcgtcgc 152

---

>dbj|AK104879.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-F01, full
           insert sequence
          Length = 900

 Score =  147 bits (74), Expect = 4e-32
 Identities = 226/277 (81%)
 Strand = Plus / Minus

                                                                       
Query: 263 gcctcgatctgctgccccagctgcatcatggtctggaacttgctgcgcacatcacagaac 322
           |||| ||| |||||| ||||||| | ||| ||||| |||||| |||||| |||| |||| 
Sbjct: 448 gcctggatttgctgctccagctgaagcatagtctgaaacttgttgcgcagatcatagaag 389

                                                                       
Query: 323 tcactcctaacaagggccaacgccatgaggcacccatctttactttttgcctcatagaac 382
           ||  | || ||||  ||||| ||||| |||||||||||| | |||||  ||| | |||||
Sbjct: 388 tcgtttctcacaacagccaatgccataaggcacccatctctgcttttgtcctgacagaac 329

                                                                       
Query: 383 tggcggaagtgcatgcaggcgagcttcactttctgagcgccaacactggagctgctcccc 442
           || ||||| |||||||| | || ||||||||||||||| |||||||||| |||||| || 
Sbjct: 328 tgacggaactgcatgcaagtgaacttcactttctgagcaccaacactggcgctgctgcct 269

                                                                       
Query: 443 ttgagctggtgcacgtgcgcgtccaccttgtcgaagtccacggcgggctggtccagcagg 502
           |||||||| || ||||  ||||| ||||| |||||||  ||| |||| || |||||||||
Sbjct: 268 ttgagctgatgaacgtaggcgtcgaccttatcgaagttgacgacgggttgctccagcagg 209

                                                
Query: 503 gcggcgatgtcggngatgatccggtcggcgtcttcgc 539
           | |||||| |||  |||||||| ||||||||| ||||
Sbjct: 208 gtggcgatctcgttgatgatcctgtcggcgtcgtcgc 172

---

>dbj|AK072521.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023131B06, full
           insert sequence
          Length = 1005

 Score =  147 bits (74), Expect = 4e-32
 Identities = 226/277 (81%)
 Strand = Plus / Minus

                                                                       
Query: 263 gcctcgatctgctgccccagctgcatcatggtctggaacttgctgcgcacatcacagaac 322
           |||| ||| |||||| ||||||| | ||| ||||| |||||| |||||| |||| |||| 
Sbjct: 525 gcctggatttgctgctccagctgaagcatagtctgaaacttgttgcgcagatcatagaag 466

                                                                       
Query: 323 tcactcctaacaagggccaacgccatgaggcacccatctttactttttgcctcatagaac 382
           ||  | || ||||  ||||| ||||| |||||||||||| | |||||  ||| | |||||
Sbjct: 465 tcgtttctcacaacagccaatgccataaggcacccatctctgcttttgtcctgacagaac 406

                                                                       
Query: 383 tggcggaagtgcatgcaggcgagcttcactttctgagcgccaacactggagctgctcccc 442
           || ||||| |||||||| | || ||||||||||||||| |||||||||| |||||| || 
Sbjct: 405 tgacggaactgcatgcaagtgaacttcactttctgagcaccaacactggcgctgctgcct 346

                                                                       
Query: 443 ttgagctggtgcacgtgcgcgtccaccttgtcgaagtccacggcgggctggtccagcagg 502
           |||||||| || ||||  ||||| ||||| |||||||  ||| |||| || |||||||||
Sbjct: 345 ttgagctgatgaacgtaggcgtcgaccttatcgaagttgacgacgggttgctccagcagg 286

                                                
Query: 503 gcggcgatgtcggngatgatccggtcggcgtcttcgc 539
           | |||||| |||  |||||||| ||||||||| ||||
Sbjct: 285 gtggcgatctcgttgatgatcctgtcggcgtcgtcgc 249

---

>gb|AY109580.1| Zea mays CL1301_1 mRNA sequence
          Length = 769

 Score =  147 bits (74), Expect = 4e-32
 Identities = 226/277 (81%)
 Strand = Plus / Minus

                                                                       
Query: 263 gcctcgatctgctgccccagctgcatcatggtctggaacttgctgcgcacatcacagaac 322
           |||| ||| |||||| | ||||| | ||| |||||||| ||  |||||| |||| |||||
Sbjct: 531 gcctggatttgctgctcaagctgaagcatagtctggaatttattgcgcagatcatagaac 472

                                                                       
Query: 323 tcactcctaacaagggccaacgccatgaggcacccatctttactttttgcctcatagaac 382
           ||| | || ||||  ||||| ||||||| |||||| ||| |  | ||  ||| | | |||
Sbjct: 471 tcatttctcacaacagccaatgccatgatgcacccgtctctgttcttatcctgacataac 412

                                                                       
Query: 383 tggcggaagtgcatgcaggcgagcttcactttctgagcgccaacactggagctgctcccc 442
           || ||||| |||||||| |  | |||||||||||||||||||||||||| ||||||||| 
Sbjct: 411 tgacggaactgcatgcaagtaaacttcactttctgagcgccaacactggcgctgctccct 352

                                                                       
Query: 443 ttgagctggtgcacgtgcgcgtccaccttgtcgaagtccacggcgggctggtccagcagg 502
           |||||||| |||||||  ||||||||||| || |||||||||  ||||||||| ||||| 
Sbjct: 351 ttgagctgatgcacgtaggcgtccaccttatcaaagtccacgatgggctggtcaagcaga 292

                                                
Query: 503 gcggcgatgtcggngatgatccggtcggcgtcttcgc 539
           |||||||  |||| |||||||| ||||||||| ||||
Sbjct: 291 gcggcgagctcggagatgatcctgtcggcgtcgtcgc 255

---

>dbj|AB024292.1| Zea mays ZmHP2 mRNA for histidine-containing phosphotransfer
           protein, complete cds
          Length = 769

 Score =  147 bits (74), Expect = 4e-32
 Identities = 226/277 (81%)
 Strand = Plus / Minus

                                                                       
Query: 263 gcctcgatctgctgccccagctgcatcatggtctggaacttgctgcgcacatcacagaac 322
           |||| ||| |||||| | ||||| | ||| |||||||| ||  |||||| |||| |||||
Sbjct: 531 gcctggatttgctgctcaagctgaagcatagtctggaatttattgcgcagatcatagaac 472

                                                                       
Query: 323 tcactcctaacaagggccaacgccatgaggcacccatctttactttttgcctcatagaac 382
           ||| | || ||||  ||||| ||||||| |||||| ||| |  | ||  ||| | | |||
Sbjct: 471 tcatttctcacaacagccaatgccatgatgcacccgtctctgttcttatcctgacataac 412

                                                                       
Query: 383 tggcggaagtgcatgcaggcgagcttcactttctgagcgccaacactggagctgctcccc 442
           || ||||| |||||||| |  | |||||||||||||||||||||||||| ||||||||| 
Sbjct: 411 tgacggaactgcatgcaagtaaacttcactttctgagcgccaacactggcgctgctccct 352

                                                                       
Query: 443 ttgagctggtgcacgtgcgcgtccaccttgtcgaagtccacggcgggctggtccagcagg 502
           |||||||| |||||||  ||||||||||| || |||||||||  ||||||||| ||||| 
Sbjct: 351 ttgagctgatgcacgtaggcgtccaccttatcaaagtccacgatgggctggtcaagcaga 292

                                                
Query: 503 gcggcgatgtcggngatgatccggtcggcgtcttcgc 539
           |||||||  |||| |||||||| ||||||||| ||||
Sbjct: 291 gcggcgagctcggagatgatcctgtcggcgtcgtcgc 255

---

>ref|XM_483752.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1138

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 68/78 (87%)
 Strand = Plus / Minus

                                                                       
Query: 406 cttcactttctgagcgccaacactggagctgctccccttgagctggtgcacgtgcgcgtc 465
           ||||||||||||||| |||||||| | |||||||||||||||||| ||||| | || |||
Sbjct: 605 cttcactttctgagcaccaacacttgcgctgctccccttgagctgatgcacatacgagtc 546

                             
Query: 466 caccttgtcgaagtccac 483
           |||| |||| || |||||
Sbjct: 545 caccctgtcaaaatccac 528

---

>gb|AY345242.1| Oryza sativa (japonica cultivar-group) two-component phosphorelay
           mediator HP2 mRNA, complete cds
          Length = 444

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 68/78 (87%)
 Strand = Plus / Minus

                                                                       
Query: 406 cttcactttctgagcgccaacactggagctgctccccttgagctggtgcacgtgcgcgtc 465
           ||||||||||||||| |||||||| | |||||||||||||||||| ||||| | || |||
Sbjct: 282 cttcactttctgagcaccaacacttgcgctgctccccttgagctgatgcacatacgagtc 223

                             
Query: 466 caccttgtcgaagtccac 483
           |||| |||| || |||||
Sbjct: 222 caccctgtcaaaatccac 205

---

>dbj|AK061111.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-D05, full
           insert sequence
          Length = 1138

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 68/78 (87%)
 Strand = Plus / Minus

                                                                       
Query: 406 cttcactttctgagcgccaacactggagctgctccccttgagctggtgcacgtgcgcgtc 465
           ||||||||||||||| |||||||| | |||||||||||||||||| ||||| | || |||
Sbjct: 605 cttcactttctgagcaccaacacttgcgctgctccccttgagctgatgcacatacgagtc 546

                             
Query: 466 caccttgtcgaagtccac 483
           |||| |||| || |||||
Sbjct: 545 caccctgtcaaaatccac 528

---

>gb|AY569613.1| Oryza sativa (japonica cultivar-group) histidine-containing
           phosphotransfer protein precursor RNA, complete cds
          Length = 1012

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 61/69 (88%)
 Strand = Plus / Minus

                                                                       
Query: 406 cttcactttctgagcgccaacactggagctgctccccttgagctggtgcacgtgcgcgtc 465
           ||||||||||||||| |||||||| | |||||||||||||||||| ||||| | || |||
Sbjct: 459 cttcactttctgagcaccaacacttgcgctgctccccttgagctgatgcacatacgagtc 400

                    
Query: 466 caccttgtc 474
           |||| ||||
Sbjct: 399 caccctgtc 391

---

>gb|AY581257.1| Oryza sativa (japonica cultivar-group) histidine-containing
           phosphotransfer protein (HPt1) mRNA, complete cds
          Length = 556

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 67/78 (85%)
 Strand = Plus / Minus

                                                                       
Query: 406 cttcactttctgagcgccaacactggagctgctccccttgagctggtgcacgtgcgcgtc 465
           ||||||||||||||| |||||||| | |||||||||||||||| | ||||| | || |||
Sbjct: 373 cttcactttctgagcaccaacacttgcgctgctccccttgagccgatgcacatacgagtc 314

                             
Query: 466 caccttgtcgaagtccac 483
           |||| |||| || |||||
Sbjct: 313 caccctgtcaaaatccac 296

---

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 66/78 (84%)
 Strand = Plus / Minus

                                                                            
Query: 353      cacccatctttactttttgcctcatagaactggcggaagtgcatgcaggcgagcttcact 412
                ||||||||| | |||||  ||| | ||||||| ||||| |||||||| | || |||||||
Sbjct: 22354052 cacccatctctgcttttgtcctgacagaactgacggaactgcatgcaagtgaacttcact 22353993

                                  
Query: 413      ttctgagcgccaacactg 430
                |||||||| |||||||||
Sbjct: 22353992 ttctgagcaccaacactg 22353975

---

>dbj|AP005558.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OJ1155_H10
          Length = 140475

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 66/78 (84%)
 Strand = Plus / Minus

                                                                          
Query: 353    cacccatctttactttttgcctcatagaactggcggaagtgcatgcaggcgagcttcact 412
              ||||||||| | |||||  ||| | ||||||| ||||| |||||||| | || |||||||
Sbjct: 116060 cacccatctctgcttttgtcctgacagaactgacggaactgcatgcaagtgaacttcact 116001

                                
Query: 413    ttctgagcgccaacactg 430
              |||||||| |||||||||
Sbjct: 116000 ttctgagcaccaacactg 115983

---

>gb|AY019830.1| Oryza sativa microsatellite MRG2155 containing (CA)X31, closest to
           marker R662, genomic sequence
          Length = 262

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                              
Query: 433 gctgctccccttgagctggtgcacgtgcgcgtccaccttgtcgaagtccac 483
           |||||||||||||||||| ||||| | || ||||||| |||| || |||||
Sbjct: 34  gctgctccccttgagctgatgcacatacgagtccaccctgtcaaaatccac 84

---

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                                   
Query: 433      gctgctccccttgagctggtgcacgtgcgcgtccaccttgtcgaagtccac 483
                |||||||||||||||||| ||||| | || ||||||| |||| || |||||
Sbjct: 27898231 gctgctccccttgagctgatgcacatacgagtccaccctgtcaaaatccac 27898181



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 406      cttcactttctgagcgccaacactg 430
                ||||||||||||||| |||||||||
Sbjct: 27899880 cttcactttctgagcaccaacactg 27899856

---

>dbj|AP003928.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1150_A11
          Length = 142010

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                                 
Query: 433    gctgctccccttgagctggtgcacgtgcgcgtccaccttgtcgaagtccac 483
              |||||||||||||||||| ||||| | || ||||||| |||| || |||||
Sbjct: 106309 gctgctccccttgagctgatgcacatacgagtccaccctgtcaaaatccac 106259



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 406    cttcactttctgagcgccaacactg 430
              ||||||||||||||| |||||||||
Sbjct: 107958 cttcactttctgagcaccaacactg 107934

---

>emb|BX511313.20| Mouse DNA sequence from clone RP24-391O14 on chromosome X, complete
             sequence
          Length = 178972

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 217   gctccttctgcttcagttttta 238
             ||||||||||||||||||||||
Sbjct: 44541 gctccttctgcttcagttttta 44562

---

>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 484     ggcgggctggtccagcagggcggcg 508
               ||||||||||| |||||||||||||
Sbjct: 2801242 ggcgggctggttcagcagggcggcg 2801218

---

>emb|AL359195.24| Human DNA sequence from clone RP11-36D19 on chromosome 10 Contains part
              of a pseudogene similar to nuclear pore complex interacting
              proteins (NPIP), a eukaryotic translation initiation factor
              5A (EIF5A) pseudogene, the MAT1A gene for methionine
              adenosyltransferase I alpha, a novel zinc finger protein
              pseudogene, three novel genes, the 5' end of the gene for a
              novel protein (MGC4248) and three CpG islands, complete
              sequence
          Length = 171148

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 487    gggctggtccagcagggcggc 507
              |||||||||||||||||||||
Sbjct: 164446 gggctggtccagcagggcggc 164426

---

>gb|AC021028.12| Homo sapiens chromosome 10 clone RP11-137H2, complete sequence
          Length = 161803

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 487  gggctggtccagcagggcggc 507
            |||||||||||||||||||||
Sbjct: 2076 gggctggtccagcagggcggc 2056

---

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 493     gtccagcagggcggcgatgtc 513
               |||||||||||||||||||||
Sbjct: 5395695 gtccagcagggcggcgatgtc 5395715

---

>gb|AC004038.1| Homo sapiens chromosome 5, BAC clone 8k5, BAC 5002 (LBNL H102),
             complete sequence
          Length = 101615

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 219   tccttctgcttcagttttta 238
             ||||||||||||||||||||
Sbjct: 60443 tccttctgcttcagttttta 60462

---

>gb|AC135497.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0008E02, complete sequence
          Length = 152974

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 146   cctacaaacaagtttaaggg 165
             ||||||||||||||||||||
Sbjct: 47802 cctacaaacaagtttaaggg 47783

---

>gb|AC114621.8| Mus musculus chromosome 3, clone RP24-93M7, complete sequence
          Length = 198404

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 431   gagctgctccccttgagctg 450
             ||||||||||||||||||||
Sbjct: 30656 gagctgctccccttgagctg 30675

---

>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome
          Length = 5928787

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 264    cctcgatctgctgccccagc 283
              ||||||||||||||||||||
Sbjct: 755705 cctcgatctgctgccccagc 755686

---

>gb|AC163218.5| Mus musculus chromosome 7, clone RP24-102H24, complete sequence
          Length = 194207

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 158   tttaagggatacatacacac 177
             ||||||||||||||||||||
Sbjct: 84971 tttaagggatacatacacac 84952

---

>gb|AC076968.38| Homo sapiens 12 BAC RP11-686F15 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 203038

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 216   agctccttctgcttcagttt 235
             ||||||||||||||||||||
Sbjct: 43953 agctccttctgcttcagttt 43934

---

>gb|AC110574.9| Mus musculus chromosome 3, clone RP23-324B15, complete sequence
          Length = 196451

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 431    gagctgctccccttgagctg 450
              ||||||||||||||||||||
Sbjct: 171133 gagctgctccccttgagctg 171152

---

>emb|AL162456.14| Human DNA sequence from clone RP11-95C14 on chromosome 13 Contains
            part of the GPC5 gene for glypican 5, complete sequence
          Length = 165100

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 287  atcatggtctggaacttgct 306
            ||||||||||||||||||||
Sbjct: 5748 atcatggtctggaacttgct 5767

---

>gb|AY152826.1| Felis catus clone BAC 102h1 major histocompatiblity complex extended
             and classical class II region, partial sequence
          Length = 132445

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 197   caggggtcacatggagctaa 216
             ||||||||||||||||||||
Sbjct: 60907 caggggtcacatggagctaa 60926

---

>emb|BX569693.1| Synechococcus sp. WH8102 complete genome; segment 5/7
          Length = 349213

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 258    tgcaggcctcgatctgctgc 277
              ||||||||||||||||||||
Sbjct: 287888 tgcaggcctcgatctgctgc 287907

---

>gb|AC113115.17| Mus musculus chromosome 7, clone RP23-338L5, complete sequence
          Length = 197397

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 158    tttaagggatacatacacac 177
              ||||||||||||||||||||
Sbjct: 145902 tttaagggatacatacacac 145883

---

>gb|AC100834.3| Homo sapiens chromosome 15, clone CTD-2125J1, complete sequence
          Length = 152005

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 287   atcatggtctggaacttgct 306
             ||||||||||||||||||||
Sbjct: 56837 atcatggtctggaacttgct 56856

---

>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 520     gatccggtcggcgtcttcgc 539
               ||||||||||||||||||||
Sbjct: 4348577 gatccggtcggcgtcttcgc 4348596

---

>gb|AC008588.8| Homo sapiens chromosome 5 clone CTC-573M9, complete sequence
          Length = 213167

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 219    tccttctgcttcagttttta 238
              ||||||||||||||||||||
Sbjct: 201305 tccttctgcttcagttttta 201286

---

>gb|AC012271.11| Homo sapiens chromosome 15, clone RP11-64O3, complete sequence
          Length = 98232

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 287  atcatggtctggaacttgct 306
            ||||||||||||||||||||
Sbjct: 3369 atcatggtctggaacttgct 3388

---

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 146     cctacaaacaagtttaaggg 165
               ||||||||||||||||||||
Sbjct: 9357401 cctacaaacaagtttaaggg 9357382

---

>gb|AC151330.2| Xenopus tropicalis clone ISB-299I17, complete sequence
          Length = 68961

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 230   cagtttttactgctactcta 249
             ||||||||||||||||||||
Sbjct: 11044 cagtttttactgctactcta 11063

---

>gb|AF546152.1| Streptomyces sp. 100/Eco52 UnbL (unbL), UnbV (unbV), UnbU (unbU),
            PskE (pksE), and TebC (tebC) genes, complete cds
          Length = 10352

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 496  cagcagggcggcgatgtcgg 515
            ||||||||||||||||||||
Sbjct: 6463 cagcagggcggcgatgtcgg 6444

---

>gb|AC108171.3| Homo sapiens chromosome X clone RP11-468J11, RP11-473F11, CTC-775O14 map
              q28, complete sequence
          Length = 185708

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 271    ctgctgccccagctgcatcatggt 294
              |||||||||||||||| |||||||
Sbjct: 124800 ctgctgccccagctgcttcatggt 124777

---

>gb|AF274857.3| Homo sapiens chromosome X clone CTD-2011N23 map q28, complete sequence
          Length = 148527

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 271    ctgctgccccagctgcatcatggt 294
              |||||||||||||||| |||||||
Sbjct: 139387 ctgctgccccagctgcttcatggt 139364

---

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 146     cctacaaacaagtttaaggg 165
               ||||||||||||||||||||
Sbjct: 9429098 cctacaaacaagtttaaggg 9429079

---

>emb|AL611929.2| Human DNA sequence from clone RP11-3C9 on chromosome 6, complete
            sequence
          Length = 28487

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 428  ctggagctgctccccttgag 447
            ||||||||||||||||||||
Sbjct: 8749 ctggagctgctccccttgag 8730


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,310,705
Number of Sequences: 3902068
Number of extensions: 4310705
Number of successful extensions: 79681
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 79218
Number of HSP's gapped (non-prelim): 456
length of query: 539
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 516
effective length of database: 17,143,297,704
effective search space: 8845941615264
effective search space used: 8845941615264
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---