ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbaal5c08 |
|---|---|
| Clone Library Name | barley_pub |
>NUBM_NEUCR (P24917) NADH-ubiquinone oxidoreductase 51 kDa subunit,| mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-51KD) (CI-51KD) Length = 493 Score = 291 bits (746), Expect = 1e-78 Identities = 135/173 (78%), Positives = 153/173 (88%) Frame = -2 Query: 737 SGHVNKPCTVEEXMSIPLKELIEKHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMD 558 SGHVN PCTVEE MSIP++ELI+KHCGGVRGGWDNLLAVIPGGSS P+LPKHICD LMD Sbjct: 291 SGHVNNPCTVEEEMSIPMRELIDKHCGGVRGGWDNLLAVIPGGSSTPILPKHICDTQLMD 350 Query: 557 YDALKAVQSGLGTAAVMVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMER 378 +DALK QSGLGTAA++VMDKSTDVV AI+RLS+FY+HESCGQCTPCREG+ W IM+R Sbjct: 351 FDALKDSQSGLGTAALIVMDKSTDVVRAISRLSHFYRHESCGQCTPCREGSKWTEQIMKR 410 Query: 377 LKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIR 219 + G + EIDMLQE+TKQ+EGHTICALG+A AWP+QGLIRHFRPELE RIR Sbjct: 411 FEKGQGREREIDMLQELTKQVEGHTICALGEAFAWPIQGLIRHFRPELEARIR 463
>NUBM_ASPNG (Q92406) NADH-ubiquinone oxidoreductase 51 kDa subunit,| mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-51KD) (CI-51KD) Length = 496 Score = 287 bits (734), Expect = 3e-77 Identities = 133/174 (76%), Positives = 154/174 (88%) Frame = -2 Query: 737 SGHVNKPCTVEEXMSIPLKELIEKHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMD 558 SGHVN PCTVEE MSI L+++I++HCGGVRGGWDNLLAVIPGGSS P+LPK ICDD LMD Sbjct: 293 SGHVNNPCTVEEEMSISLRDVIDRHCGGVRGGWDNLLAVIPGGSSTPVLPKTICDDQLMD 352 Query: 557 YDALKAVQSGLGTAAVMVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMER 378 +DALK QSGLGTAAV+VMDKSTD+V AI+RLS FYKHESCGQCTPCREG+ W +M+R Sbjct: 353 FDALKDSQSGLGTAAVIVMDKSTDIVRAISRLSTFYKHESCGQCTPCREGSKWTMHMMQR 412 Query: 377 LKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIRD 216 ++ G A+ EIDMLQE+TKQ+EGHTICALG+A AWP+QGLIRHFRPELE RIR+ Sbjct: 413 MEKGQAREREIDMLQELTKQVEGHTICALGEAFAWPIQGLIRHFRPELEARIRE 466
>NUOF1_RHIME (P56912) NADH-quinone oxidoreductase chain F 1 (EC 1.6.99.5) (NADH| dehydrogenase I, chain F 1) (NDH-1, chain F 1) Length = 434 Score = 280 bits (715), Expect = 4e-75 Identities = 128/172 (74%), Positives = 148/172 (86%) Frame = -2 Query: 737 SGHVNKPCTVEEXMSIPLKELIEKHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMD 558 SGHVN+PCTVE+ MSIP ELIEKHCGG+RGGWDNLLAVIPGGSSVP +P D +MD Sbjct: 245 SGHVNRPCTVEDAMSIPFHELIEKHCGGIRGGWDNLLAVIPGGSSVPCVPGAQMKDAIMD 304 Query: 557 YDALKAVQSGLGTAAVMVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMER 378 YD L+ + SGLGTAAV+VMDKSTD++ AI RLS FYKHESCGQCTPCREGTGW+ +MER Sbjct: 305 YDGLRELGSGLGTAAVIVMDKSTDIIKAIWRLSAFYKHESCGQCTPCREGTGWMMRVMER 364 Query: 377 LKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRI 222 + G A+ EIDML +VTKQ+EGHTICALGDAAAWP+QGLI+HFRPE+E+RI Sbjct: 365 MVQGRAQKREIDMLFDVTKQVEGHTICALGDAAAWPIQGLIKHFRPEMEKRI 416
>NUBM_BOVIN (P25708) NADH-ubiquinone oxidoreductase 51 kDa subunit,| mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-51KD) (CI-51KD) (NADH dehydrogenase flavoprotein 1) Length = 464 Score = 276 bits (705), Expect = 6e-74 Identities = 130/178 (73%), Positives = 148/178 (83%) Frame = -2 Query: 737 SGHVNKPCTVEEXMSIPLKELIEKHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMD 558 SGHVN PCTVEE MS+PLKELIEKH GGV GGWDNLLAVIPGGSS PL+PK +C+ VLMD Sbjct: 279 SGHVNNPCTVEEEMSVPLKELIEKHAGGVTGGWDNLLAVIPGGSSTPLIPKSVCETVLMD 338 Query: 557 YDALKAVQSGLGTAAVMVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMER 378 +DAL Q+GLGTAAV+VMD+STD+V AIARL FYKHESCGQCTPCREG W+ +M R Sbjct: 339 FDALIQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQCTPCREGVDWMNKVMAR 398 Query: 377 LKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIRDRADR 204 G+A+ EID L E++KQIEGHTICALGD AAWPVQGLIRHFRPELE R++ A + Sbjct: 399 FVRGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELEERMQQFAQQ 456
>NUBM_HUMAN (P49821) NADH-ubiquinone oxidoreductase 51 kDa subunit,| mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-51KD) (CI-51KD) (NADH dehydrogenase flavoprotein 1) Length = 464 Score = 275 bits (703), Expect = 1e-73 Identities = 129/173 (74%), Positives = 146/173 (84%) Frame = -2 Query: 737 SGHVNKPCTVEEXMSIPLKELIEKHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMD 558 SGHVN PCTVEE MS+PLKELIEKH GGV GGWDNLLAVIPGGSS PL+PK +C+ VLMD Sbjct: 279 SGHVNHPCTVEEEMSVPLKELIEKHAGGVTGGWDNLLAVIPGGSSTPLIPKSVCETVLMD 338 Query: 557 YDALKAVQSGLGTAAVMVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMER 378 +DAL Q+GLGTAAV+VMD+STD+V AIARL FYKHESCGQCTPCREG W+ +M R Sbjct: 339 FDALVQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQCTPCREGVDWMNKVMAR 398 Query: 377 LKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIR 219 G+A+ EID L E++KQIEGHTICALGD AAWPVQGLIRHFRPELE R++ Sbjct: 399 FVRGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELEERMQ 451
>NUBM_MOUSE (Q91YT0) NADH-ubiquinone oxidoreductase 51 kDa subunit,| mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-51KD) (CI-51KD) (NADH dehydrogenase flavoprotein 1) Length = 464 Score = 275 bits (702), Expect = 1e-73 Identities = 129/173 (74%), Positives = 146/173 (84%) Frame = -2 Query: 737 SGHVNKPCTVEEXMSIPLKELIEKHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMD 558 SGHVN PCTVEE MS+PLKELIEKH GGV GGWDNLLAVIPGGSS PL+PK +C+ VLMD Sbjct: 279 SGHVNHPCTVEEEMSVPLKELIEKHAGGVTGGWDNLLAVIPGGSSTPLIPKSVCETVLMD 338 Query: 557 YDALKAVQSGLGTAAVMVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMER 378 +DAL Q+GLGTAAV+VMD+STD+V AIARL FYKHESCGQCTPCREG W+ +M R Sbjct: 339 FDALVQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQCTPCREGVDWMNKVMAR 398 Query: 377 LKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIR 219 G+A+ EID L E++KQIEGHTICALGD AAWPVQGLIRHFRPELE R++ Sbjct: 399 FVKGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELEDRMQ 451
>NUOF_RHOCA (O07948) NADH-quinone oxidoreductase chain F (EC 1.6.99.5) (NADH| dehydrogenase I, chain F) (NDH-1, chain F) Length = 431 Score = 273 bits (699), Expect = 3e-73 Identities = 122/175 (69%), Positives = 146/175 (83%) Frame = -2 Query: 737 SGHVNKPCTVEEXMSIPLKELIEKHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMD 558 SGHVN PC VEE MSI +KELIEKH GGVRGGW NL AVIPGG+S P++P H+C+D +MD Sbjct: 246 SGHVNTPCVVEEAMSISMKELIEKHGGGVRGGWKNLKAVIPGGASCPVIPAHLCEDAIMD 305 Query: 557 YDALKAVQSGLGTAAVMVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMER 378 YD ++ QS GTA ++VMD+ TD++ AIARLS F+KHESCGQCTPCREGT W+W +MER Sbjct: 306 YDGMREKQSSFGTACLIVMDQQTDIIKAIARLSKFFKHESCGQCTPCREGTSWMWRVMER 365 Query: 377 LKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIRDR 213 L G A++EEIDML VTKQ+EGHTICALGDAAAWP+QGLIRH+R E+E RI+ R Sbjct: 366 LVTGEAEVEEIDMLFSVTKQVEGHTICALGDAAAWPIQGLIRHYREEIEDRIKAR 420
>NUOF_RICPR (Q9ZE33) NADH-quinone oxidoreductase chain F (EC 1.6.99.5) (NADH| dehydrogenase I, chain F) (NDH-1, chain F) Length = 421 Score = 273 bits (699), Expect = 3e-73 Identities = 126/173 (72%), Positives = 148/173 (85%) Frame = -2 Query: 737 SGHVNKPCTVEEXMSIPLKELIEKHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMD 558 SGHVNKPC +EE M +PLKELIEK+ GGVRGGW+NL A+IPGG+SVPLLPK +C+ V MD Sbjct: 245 SGHVNKPCNIEEVMGVPLKELIEKYAGGVRGGWNNLKAIIPGGASVPLLPKSLCE-VEMD 303 Query: 557 YDALKAVQSGLGTAAVMVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMER 378 +D+L+ V SGLGT ++VMDKSTD++ AIARLS FY HESCGQCTPCREGTGW+W +M R Sbjct: 304 FDSLRTVGSGLGTGGIIVMDKSTDIIYAIARLSKFYMHESCGQCTPCREGTGWMWRVMMR 363 Query: 377 LKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIR 219 L GNAK EID L VTK+IEGHTICALGDAAAWP+QGLIRHFR E+E+RI+ Sbjct: 364 LVNGNAKKNEIDTLLNVTKEIEGHTICALGDAAAWPIQGLIRHFRDEIEQRIK 416
>NUBM_MACFA (Q8HXQ9) NADH-ubiquinone oxidoreductase 51 kDa subunit,| mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-51KD) (CI-51KD) (NADH dehydrogenase flavoprotein 1) Length = 464 Score = 273 bits (697), Expect = 5e-73 Identities = 128/173 (73%), Positives = 146/173 (84%) Frame = -2 Query: 737 SGHVNKPCTVEEXMSIPLKELIEKHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMD 558 SGHVN PCTVEE MS+PLKELIEKH GGV GGWDNLLAVIPGGSS PL+PK +C+ VLMD Sbjct: 279 SGHVNHPCTVEEEMSVPLKELIEKHAGGVTGGWDNLLAVIPGGSSTPLIPKSVCETVLMD 338 Query: 557 YDALKAVQSGLGTAAVMVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMER 378 +DAL Q+GLGTAAV+VMD+STD+V AIARL FYK+ESCGQCTPCREG W+ +M R Sbjct: 339 FDALVQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKYESCGQCTPCREGVDWMNKVMAR 398 Query: 377 LKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIR 219 G+A+ EID L E++KQIEGHTICALGD AAWPVQGLIRHFRPELE R++ Sbjct: 399 FVRGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELEERMQ 451
>NUOF_RICCN (Q92JB2) NADH-quinone oxidoreductase chain F (EC 1.6.99.5) (NADH| dehydrogenase I, chain F) (NDH-1, chain F) Length = 421 Score = 269 bits (687), Expect = 8e-72 Identities = 126/173 (72%), Positives = 144/173 (83%) Frame = -2 Query: 737 SGHVNKPCTVEEXMSIPLKELIEKHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMD 558 SGHVNKPC VEE M I LKELIEK+ GGVRGGWDNL A+IPGGSSVPLLPK +C+ V MD Sbjct: 245 SGHVNKPCNVEEAMGISLKELIEKYAGGVRGGWDNLKAIIPGGSSVPLLPKSLCE-VDMD 303 Query: 557 YDALKAVQSGLGTAAVMVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMER 378 +D+L+ SGLGT ++VMD+STD++ AIARLS FY HESCGQCTPCREGTGW+W +M R Sbjct: 304 FDSLRTAGSGLGTGGIIVMDQSTDIIYAIARLSKFYMHESCGQCTPCREGTGWMWRVMMR 363 Query: 377 LKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIR 219 L GN K EID L VTK+IEGHTICALGDAAAWP+QGLIRHFR E+E RI+ Sbjct: 364 LVKGNVKKSEIDELLNVTKEIEGHTICALGDAAAWPIQGLIRHFRSEIEARIK 416
>NQO1_PARDE (P29913) NADH-quinone oxidoreductase chain 1 (EC 1.6.99.5) (NADH| dehydrogenase I, chain 1) (NDH-1, chain 1) Length = 431 Score = 259 bits (663), Expect = 5e-69 Identities = 119/173 (68%), Positives = 146/173 (84%) Frame = -2 Query: 737 SGHVNKPCTVEEXMSIPLKELIEKHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMD 558 +GHVN PC VEE MSIP++ELIEKH GG+RGGW NL AVIPGG+S P+L C++ +MD Sbjct: 246 TGHVNTPCVVEEAMSIPMRELIEKHGGGIRGGWKNLKAVIPGGASCPVLTAEQCENAIMD 305 Query: 557 YDALKAVQSGLGTAAVMVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMER 378 YD ++ V+S GTA ++VMD+STDVV AI RLS F+KHESCGQCTPCREGTGW+ +MER Sbjct: 306 YDGMRDVRSSFGTACMIVMDQSTDVVKAIWRLSKFFKHESCGQCTPCREGTGWMMRVMER 365 Query: 377 LKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIR 219 L G+A++EEIDML +VTKQ+EGHTICALGDAAAWP+QGLIR+FR E+E RI+ Sbjct: 366 LVRGDAEVEEIDMLFDVTKQVEGHTICALGDAAAWPIQGLIRNFREEIEDRIK 418
>NUOF_MYCTU (P65567) NADH-quinone oxidoreductase chain F (EC 1.6.99.5) (NADH| dehydrogenase I, chain F) (NDH-1, chain F) Length = 445 Score = 151 bits (381), Expect = 2e-36 Identities = 84/168 (50%), Positives = 109/168 (64%), Gaps = 1/168 (0%) Frame = -2 Query: 737 SGHVNKPCTVEEXMSIPLKELIEKHCGGVRGGWDNLLAVIPGGSSVPLLP-KHICDDVLM 561 SGHV +P E + I L+EL++ + GGVR G L PGGSS PLL +H+ DV + Sbjct: 256 SGHVTRPGQYEAPLGITLRELLD-YAGGVRAG-HRLKFWTPGGSSTPLLTDEHL--DVPL 311 Query: 560 DYDALKAVQSGLGTAAVMVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIME 381 DY+ + A S LGT A+ + D++T VV A+ R + FYKHESCG+CTPCREGT WL I E Sbjct: 312 DYEGVGAAGSMLGTKALEIFDETTCVVRAVRRWTEFYKHESCGKCTPCREGTFWLDKIYE 371 Query: 380 RLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPE 237 RL+ G E+ID L +++ I G + CALGD AA PV I+HFR E Sbjct: 372 RLETGRGSHEDIDKLLDISDSILGKSFCALGDGAASPVMSSIKHFRDE 419
>NUOF_MYCBO (P65568) NADH-quinone oxidoreductase chain F (EC 1.6.99.5) (NADH| dehydrogenase I, chain F) (NDH-1, chain F) Length = 445 Score = 151 bits (381), Expect = 2e-36 Identities = 84/168 (50%), Positives = 109/168 (64%), Gaps = 1/168 (0%) Frame = -2 Query: 737 SGHVNKPCTVEEXMSIPLKELIEKHCGGVRGGWDNLLAVIPGGSSVPLLP-KHICDDVLM 561 SGHV +P E + I L+EL++ + GGVR G L PGGSS PLL +H+ DV + Sbjct: 256 SGHVTRPGQYEAPLGITLRELLD-YAGGVRAG-HRLKFWTPGGSSTPLLTDEHL--DVPL 311 Query: 560 DYDALKAVQSGLGTAAVMVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIME 381 DY+ + A S LGT A+ + D++T VV A+ R + FYKHESCG+CTPCREGT WL I E Sbjct: 312 DYEGVGAAGSMLGTKALEIFDETTCVVRAVRRWTEFYKHESCGKCTPCREGTFWLDKIYE 371 Query: 380 RLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPE 237 RL+ G E+ID L +++ I G + CALGD AA PV I+HFR E Sbjct: 372 RLETGRGSHEDIDKLLDISDSILGKSFCALGDGAASPVMSSIKHFRDE 419
>NUOF2_RHIME (P56913) NADH-quinone oxidoreductase chain F 2 (EC 1.6.99.5) (NADH| dehydrogenase I, chain F 2) (NDH-1, chain F 2) Length = 421 Score = 145 bits (365), Expect = 2e-34 Identities = 76/175 (43%), Positives = 109/175 (62%) Frame = -2 Query: 737 SGHVNKPCTVEEXMSIPLKELIEKHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMD 558 SG V KP E M I L+EL+E+H GG G + AVIPGG S P++P+ + V MD Sbjct: 244 SGQVRKPGLYELPMGISLRELVEEHAGGPLPG-RKVKAVIPGGVSAPVIPEGELE-VGMD 301 Query: 557 YDALKAVQSGLGTAAVMVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMER 378 +D+L A S LG+A V+V+D ST +V R+ F+ HESCG+CTPCREG W ++ R Sbjct: 302 FDSLTAAGSMLGSAGVVVIDDSTCMVKLATRIIEFFHHESCGKCTPCREGLDWTVKVLRR 361 Query: 377 LKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIRDR 213 ++ G + +++ L+ + K I G+T CALGD AA ++ ++HFR E I +R Sbjct: 362 IEAGEGETGDLEQLEMLCKGIFGNTFCALGDGAAMGLRAALKHFRAEFVAHIEER 416
>NUOF_STRCO (Q9XAQ9) NADH-quinone oxidoreductase chain F (EC 1.6.99.5) (NADH| dehydrogenase I, chain F) (NDH-1, chain F) Length = 449 Score = 135 bits (341), Expect = 1e-31 Identities = 73/176 (41%), Positives = 106/176 (60%), Gaps = 1/176 (0%) Frame = -2 Query: 737 SGHVNKPCTVEEXMSIPLKELIEKHCGGVRGGWDNLLAVIPGGSSVPLLP-KHICDDVLM 561 SGHV P E + I L++L++ GG+R G L PGGSS P+ +H+ DV + Sbjct: 258 SGHVAGPGQYEAPLGITLRQLLDMS-GGMRPG-HRLKFWTPGGSSTPMFTDEHL--DVPL 313 Query: 560 DYDALKAVQSGLGTAAVMVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIME 381 DY+ + A S LGT A+ D++T VV A+ R + FY HESCG+CTPCREGT WL ++ Sbjct: 314 DYEGVGAAGSMLGTKALQCFDETTCVVRAVTRWTEFYAHESCGKCTPCREGTYWLVQLLR 373 Query: 380 RLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIRDR 213 ++ G ++ ++D L ++ I G + CALGD AA P+ +++FR E E I R Sbjct: 374 DIEAGKGQMSDLDKLNDIADNINGKSFCALGDGAASPIFSSLKYFREEYEEHITGR 429
>NQO1_THET8 (Q56222) NADH-quinone oxidoreductase subunit 1 (EC 1.6.99.5) (NADH| dehydrogenase I chain 1) (NDH-1 subunit 1) Length = 438 Score = 124 bits (310), Expect = 4e-28 Identities = 69/179 (38%), Positives = 106/179 (59%), Gaps = 4/179 (2%) Frame = -2 Query: 737 SGHVNKPCTVEEXMSIPLKELIEKHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVL-- 564 SG V +P E M +ELI + GG + + A+IPGGSS P LP ++VL Sbjct: 255 SGPVKRPGVYELPMGTTFRELIYEWAGGPL---EPIQAIIPGGSSTPPLP--FTEEVLDT 309 Query: 563 -MDYDALKAVQSGLGTAAVMVMDKSTDVVDAIARLSYFYKHESCGQCTPCREG-TGWLWM 390 M Y+ L+A S LGT V+++ + +VDA+ L+ FY HESCG+CTPCREG G++ Sbjct: 310 PMSYEHLQAKGSMLGTGGVILIPERVSMVDAMWNLTRFYAHESCGKCTPCREGVAGFMVN 369 Query: 389 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIRDR 213 + ++ G + ++++ L+ + IEG + C L DAA WPV+G +RHF+ + R++ Sbjct: 370 LFAKIGTGQGEEKDVENLEALLPLIEGRSFCPLADAAVWPVKGSLRHFKDQYLALAREK 428
>NUOF_BUCBP (Q89AU2) NADH-quinone oxidoreductase chain F (EC 1.6.99.5) (NADH| dehydrogenase I, chain F) (NDH-1, chain F) Length = 444 Score = 103 bits (258), Expect = 4e-22 Identities = 61/171 (35%), Positives = 95/171 (55%), Gaps = 2/171 (1%) Frame = -2 Query: 737 SGHVNKPCTVEEXMSIPLKELIEKHCGGVRGGWDNLLAVIPGGSSVP-LLPKHICDDVLM 561 SG V P E I +E+ E++ GG++ L PGG+S L+ KH+ DV M Sbjct: 256 SGSVKFPGIWELPFGITAREIFERYAGGMKNN-KKLKVWQPGGASTSFLIDKHL--DVPM 312 Query: 560 DYDALKAVQSGLGTAAVMVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIME 381 D+ +K V S LGTA M +D S +V + + F+ ESCG CTPCR+G W+ I++ Sbjct: 313 DFVNIKKVGSRLGTALAMAVDDSVSIVSLVRNIEEFFSRESCGFCTPCRDGLPWIVKILK 372 Query: 380 RLKVGNAKLEEIDMLQEVTKQI-EGHTICALGDAAAWPVQGLIRHFRPELE 231 L+ E+I++L+++ +Q+ G T CA A P++ +++FR E E Sbjct: 373 VLEQKIGVPEDIEILEQLCEQLGPGRTFCAHAPGAIEPLKSALKYFRLEFE 423
>NUOF_BUCAP (Q8K9Y3) NADH-quinone oxidoreductase chain F (EC 1.6.99.5) (NADH| dehydrogenase I, chain F) (NDH-1, chain F) Length = 447 Score = 99.8 bits (247), Expect = 8e-21 Identities = 58/174 (33%), Positives = 90/174 (51%), Gaps = 2/174 (1%) Frame = -2 Query: 737 SGHVNKPCTVEEXMSIPLKELIEKHCGGVRGGWDNLLAVIPGGSSVP-LLPKHICDDVLM 561 SG VN P E +E++E + G++ G L + PGG+ L+ KH+ D+ M Sbjct: 254 SGKVNNPGVWELPFGTTAREILEDYARGMKSGLF-LKSWQPGGAGTDFLIEKHL--DLPM 310 Query: 560 DYDALKAVQSGLGTAAVMVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIME 381 D+ ++ S LGTA M +D T+++ + + F+ ESCG CTPCREG W+ I+E Sbjct: 311 DFTSIAKAGSRLGTAIAMAVDNKTNMISLVCNIEKFFSRESCGLCTPCREGLPWIVKILE 370 Query: 380 RLKVGNAKLEEIDMLQEVTKQIE-GHTICALGDAAAWPVQGLIRHFRPELERRI 222 L+ ++ L+ + + G T CA A P+Q I++FR E E I Sbjct: 371 SLEKKEGHKNDVKNLERLCLDLSPGKTFCAHAPGAVEPLQSAIKYFRLEFEAGI 424
>NUOF_BUCAI (P57256) NADH-quinone oxidoreductase chain F (EC 1.6.99.5) (NADH| dehydrogenase I, chain F) (NDH-1, chain F) Length = 444 Score = 99.4 bits (246), Expect = 1e-20 Identities = 58/177 (32%), Positives = 92/177 (51%), Gaps = 2/177 (1%) Frame = -2 Query: 737 SGHVNKPCTVEEXMSIPLKELIEKHCGGVRGGWDNLLAVIPGGSSVP-LLPKHICDDVLM 561 SG+V P E +E++E + G++ G+ +L A PGG+ LL +H+ D+ M Sbjct: 255 SGNVRNPGVWELPFGTTAREILEDYAHGMKSGF-SLKAWQPGGAGTDFLLEEHL--DLPM 311 Query: 560 DYDALKAVQSGLGTAAVMVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIME 381 D+ + S LGTA M +D T +V + + F+ ESCG CTPCR+G W+ I++ Sbjct: 312 DFKNISQAGSRLGTALSMAVDNKTSMVSLVYNIEKFFSRESCGLCTPCRDGLPWIVKILK 371 Query: 380 RLKVGNAKLEEIDMLQEVTKQIE-GHTICALGDAAAWPVQGLIRHFRPELERRIRDR 213 L+ ++ L+++ + G T CA A P+Q I++FR E E I R Sbjct: 372 SLEQNKGHKNDVKNLEKLCSHLSPGKTFCAHAPGAIEPLQSAIKYFRSEFESGINIR 428
>NUOF_ECOLI (P31979) NADH-quinone oxidoreductase chain F (EC 1.6.99.5) (NADH| dehydrogenase I, chain F) (NDH-1, chain F) (NUO6) Length = 445 Score = 98.6 bits (244), Expect = 2e-20 Identities = 58/175 (33%), Positives = 92/175 (52%), Gaps = 2/175 (1%) Frame = -2 Query: 737 SGHVNKPCTVEEXMSIPLKELIEKHCGGVRGGWDNLLAVIPGGSSVPLLPK-HICDDVLM 561 SG V P E +E++E + GG+R G A PGG+ L + H+ D+ M Sbjct: 253 SGRVKNPGLWELPFGTTAREILEDYAGGMRDGL-KFKAWQPGGAGTDFLTEAHL--DLPM 309 Query: 560 DYDALKAVQSGLGTAAVMVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIME 381 +++++ S LGTA M +D ++V + L F+ ESCG CTPCR+G W I+ Sbjct: 310 EFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILR 369 Query: 380 RLKVGNAKLEEIDMLQEVTKQI-EGHTICALGDAAAWPVQGLIRHFRPELERRIR 219 L+ G + +I+ L+++ + + G T CA A P+Q I++FR E E I+ Sbjct: 370 ALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIK 424
>NUOF_SALTY (P33901) NADH-quinone oxidoreductase chain F (EC 1.6.99.5) (NADH| dehydrogenase I, chain F) (NDH-1, chain F) Length = 445 Score = 97.8 bits (242), Expect = 3e-20 Identities = 58/175 (33%), Positives = 91/175 (52%), Gaps = 2/175 (1%) Frame = -2 Query: 737 SGHVNKPCTVEEXMSIPLKELIEKHCGGVRGGWDNLLAVIPGGSSVPLLPK-HICDDVLM 561 SG V P E +E++E + GG+R G A PGG+ L + H+ D+ M Sbjct: 253 SGRVKNPGLWELPFGTTAREILEDYAGGMRDGL-KFKAWQPGGAGTDFLTEAHL--DLPM 309 Query: 560 DYDALKAVQSGLGTAAVMVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIME 381 +++++ S LGTA M +D +V + L F+ ESCG CTPCR+G W I+ Sbjct: 310 EFESIGKAGSRLGTALAMAVDHEIGMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILR 369 Query: 380 RLKVGNAKLEEIDMLQEVTKQI-EGHTICALGDAAAWPVQGLIRHFRPELERRIR 219 L+ G + +I+ L+++ + + G T CA A P+Q I++FR E E I+ Sbjct: 370 ALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIK 424
>NUOF_AQUAE (O66841) NADH-quinone oxidoreductase chain F (EC 1.6.99.5) (NADH| dehydrogenase I, chain F) (NDH-1, chain F) Length = 426 Score = 85.5 bits (210), Expect = 2e-16 Identities = 58/174 (33%), Positives = 88/174 (50%), Gaps = 4/174 (2%) Frame = -2 Query: 737 SGHVNKPCTVEEXMSIPLKELIEKHCGGVRGGWDNLLAVIPGG----SSVPLLPKHICDD 570 SG V KP E M+ L+E+I K+ GG G + AV G SS L D Sbjct: 255 SGKVKKPGVYELPMNTTLREVIFKYAGGTLGN-KKVKAVFSGALDCFSSEEL-------D 306 Query: 569 VLMDYDALKAVQSGLGTAAVMVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWM 390 + MDY L GT V+V+ + D+V+A +++ FY+HE+CGQCTPCR G Sbjct: 307 IPMDYSPLGFG----GTGTVIVLTEEDDIVEAALKIAEFYEHETCGQCTPCRVGCYEQAN 362 Query: 389 IMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELER 228 ++E++ G A ++ + V + I+ +IC LG A ++ + F E E+ Sbjct: 363 LLEKIYKGEATEQDWEGFDFVNRNIQPTSICGLGAVAGRLIRQTLEKFPEEWEK 416
>HOXF_RALEU (P22317) NAD-reducing hydrogenase hoxS alpha subunit (EC 1.12.1.2)| Length = 602 Score = 43.1 bits (100), Expect = 9e-04 Identities = 39/168 (23%), Positives = 66/168 (39%) Frame = -2 Query: 737 SGHVNKPCTVEEXMSIPLKELIEKHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMD 558 +G +KP E + L E++ + G D I G P C V D Sbjct: 411 AGDCSKPGIYEVEWGVTLNEVL-----AMVGARDARAVQISG-------PSGECVSVAKD 458 Query: 557 YDALKAVQSGLGTAAVMVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWMIMER 378 + A + A + + D+++ + F+ ESCG C PCR G L +E Sbjct: 459 GERKLAYEDLSCNGAFTIFNCKRDLLEIVRDHMQFFVEESCGICVPCRAGNVDLHRKVEW 518 Query: 377 LKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 234 + G A +++D + + + C LG + P+ + F PE+ Sbjct: 519 VIAGKACQKDLDDMVSWGALVRRTSRCGLGATSPKPILTTLEKF-PEI 565
>UXUA1_AGRT5 (Q8UAW0) Mannonate dehydratase 1 (EC 4.2.1.8) (D-mannonate| hydrolase 1) Length = 402 Score = 33.1 bits (74), Expect = 0.92 Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 8/64 (12%) Frame = -2 Query: 398 LWMIMERLK----VGNAKLEE--IDMLQEVTKQIE--GHTICALGDAAAWPVQGLIRHFR 243 L ++E+L+ + +L++ ID L EVT E G ICA GD WP+ GL R Sbjct: 190 LAQLLEKLRSYHGINRGRLQQNLIDFLSEVTPVAEEVGINICAHGDDPPWPLLGLPRILS 249 Query: 242 PELE 231 E + Sbjct: 250 TEAD 253
>FINC_HORSE (Q28377) Fibronectin (FN) (Fragment)| Length = 522 Score = 32.3 bits (72), Expect = 1.6 Identities = 20/59 (33%), Positives = 26/59 (44%) Frame = +1 Query: 505 TITAAVPNPDCTAFSAS*SINTSSHMCFGKRGTDEPPGITASRLSHPPLTPPQCFSINS 681 TIT P + T + N S G+R TDEPP + L HP L P+ + S Sbjct: 172 TITGLEPGTEYTIQVIAIKNNQKSEPLIGRRKTDEPPQLVT--LPHPNLHGPEILDVPS 228
>DDL_SYNPX (Q7U5Q9) D-alanine--D-alanine ligase (EC 6.3.2.4) (D-alanylalanine| synthetase) (D-Ala-D-Ala ligase) Length = 353 Score = 31.6 bits (70), Expect = 2.7 Identities = 18/51 (35%), Positives = 22/51 (43%) Frame = -2 Query: 569 VLMDYDALKAVQSGLGTAAVMVMDKSTDVVDAIARLSYFYKHESCGQCTPC 417 V MD A+KA +G G A V + D + AR K G C PC Sbjct: 133 VSMDKQAMKAALAGAGLAQVPYVCAQADELSDAARQEALLKRIESGLCYPC 183
>L2GL2_BRARE (Q7SZE3) Lethal(2) giant larvae protein homolog 2 (Protein penner)| Length = 1020 Score = 30.0 bits (66), Expect = 7.8 Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 8/76 (10%) Frame = +3 Query: 93 VSYICMCRNELHQFALFL*IKSANKKWCLCRSCHQQLPIST--------IADPPLQLRSE 248 V Y C+ R ++ A + K + + S ++ +ST + +PPLQ+RS+ Sbjct: 881 VHYPCIRREDVSGIASCVFTKYGQGFYLISPSEFERFSLSTRWVVQPHCLVEPPLQMRSK 940 Query: 249 VPDKTLHRPCCSIPEG 296 P +HR +P+G Sbjct: 941 SPSSPVHR---DLPDG 953 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 110,833,934 Number of Sequences: 219361 Number of extensions: 2441341 Number of successful extensions: 6465 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 6162 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6449 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7706249192 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
