>RFA2_SCHPO (Q92373) Replication factor-A protein 2 (Single-stranded|
           DNA-binding protein P30 subunit)
          Length = 279

 Score = 64.3 bits (155), Expect = 3e-10
 Identities = 44/137 (32%), Positives = 68/137 (49%), Gaps = 3/137 (2%)
 Frame = -1

Query: 654 APSSLRPFTIKVLLDA--FYDDTEQYPFVIDGMAVSSVELLGMVTNKTVSMDHCTFDLYD 481
           A + LRP TIK +L+A   + D E   F IDG+ V  V  +G++ N      + T+ + D
Sbjct: 46  AGNKLRPVTIKQILNASQVHADAE---FKIDGVEVGQVTFVGVLRNIHAQTTNTTYQIED 102

Query: 480 GTGAVNVIYWFEGAQDSKDAWS-FSNGMYVRVVGRTTSMEQFFQIKAYIVRPINNFNDVT 304
           GTG + V +W     +  DA S  +   YVRV G          I +  +R I + N+V 
Sbjct: 103 GTGMIEVRHW-----EHIDALSELATDTYVRVYGNIKIFSGKIYIASQYIRTIKDHNEVH 157

Query: 303 HHFIYCIYAHIDISRQA 253
            HF+  I  H+  +++A
Sbjct: 158 FHFLEAIAVHLHFTQKA 174

>RFA2_YEAST (P26754) Replication factor-A protein 2 (RF-A) (DNA-binding protein|
           BUF1) (Replication protein A 36 kDa subunit)
          Length = 273

 Score = 57.8 bits (138), Expect = 3e-08
 Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 14/144 (9%)
 Frame = -1

Query: 663 TERAPSSLRPFTIKVLLDAFYDDTEQYPFVIDGMAVSSVELLGMVTNKTVSMDHCTFDLY 484
           T    ++L P TIK +L++   D +  PFV     +  V  +G+V N T    +    + 
Sbjct: 32  TNTRVNTLTPVTIKQILES-KQDIQDGPFVSHNQELHHVCFVGVVRNITDHTANIFLTIE 90

Query: 483 DGTGAVNVIYWFEGAQD--------------SKDAWSFSNGMYVRVVGRTTSMEQFFQIK 346
           DGTG + V  W E A D              S+ A  F  G YV+V G          I+
Sbjct: 91  DGTGQIEVRKWSEDANDLAAGNDDSSGKGYGSQVAQQFEIGGYVKVFGALKEFGGKKNIQ 150

Query: 345 AYIVRPINNFNDVTHHFIYCIYAH 274
             +++PI++FN+V  H +  I  H
Sbjct: 151 YAVIKPIDSFNEVLTHHLEVIKCH 174

>RFA2_HUMAN (P15927) Replication protein A 32 kDa subunit (RP-A) (RF-A)|
           (Replication factor-A protein 2) (p32) (p34)
          Length = 270

 Score = 45.8 bits (107), Expect = 1e-04
 Identities = 32/127 (25%), Positives = 59/127 (46%), Gaps = 1/127 (0%)
 Frame = -1

Query: 636 PFTIKVLLDAFYDDTEQYPFVIDGMAVSSVELLGMVTNKTVSMDHCTFDLYDGTGA-VNV 460
           P TI  LL A   D     F I  + +S V ++G++ +   +  +  + + D T A ++V
Sbjct: 48  PCTISQLLSATLVDEV---FRIGNVEISQVTIVGIIRHAEKAPTNIVYKIDDMTAAPMDV 104

Query: 459 IYWFEGAQDSKDAWSFSNGMYVRVVGRTTSMEQFFQIKAYIVRPINNFNDVTHHFIYCIY 280
             W +    S +        YV+V G   S +    + A+ + P+ + N+ T H +  I 
Sbjct: 105 RQWVDTDDTSSENTVVPPETYVKVAGHLRSFQNKKSLVAFKIMPLEDMNEFTTHILEVIN 164

Query: 279 AHIDISR 259
           AH+ +S+
Sbjct: 165 AHMVLSK 171

>RFA2_PONPY (Q5RC43) Replication protein A 32 kDa subunit (RP-A) (RF-A)|
           (Replication factor-A protein 2) (p32)
          Length = 270

 Score = 45.4 bits (106), Expect = 2e-04
 Identities = 32/127 (25%), Positives = 59/127 (46%), Gaps = 1/127 (0%)
 Frame = -1

Query: 636 PFTIKVLLDAFYDDTEQYPFVIDGMAVSSVELLGMVTNKTVSMDHCTFDLYDGTGA-VNV 460
           P TI  LL A   D     F I  + +S V ++G++ +   +  +  + + D T A ++V
Sbjct: 48  PCTISQLLSATLVDEV---FRIGNVEISQVTIVGIIRHAEKAPTNIVYKIDDMTAAPMDV 104

Query: 459 IYWFEGAQDSKDAWSFSNGMYVRVVGRTTSMEQFFQIKAYIVRPINNFNDVTHHFIYCIY 280
             W +    S +        YV+V G   S +    + A+ + P+ + N+ T H +  I 
Sbjct: 105 RQWVDTDDASSENTVVPPETYVKVAGHLRSFQNKKSLVAFKIMPLEDMNEFTTHILEVIN 164

Query: 279 AHIDISR 259
           AH+ +S+
Sbjct: 165 AHMVLSK 171

>RFA2_CRIFA (Q23697) Replication protein A 28 kDa subunit (RP-A) (RF-A)|
           (Replication factor-A protein 2)
          Length = 258

 Score = 34.3 bits (77), Expect = 0.37
 Identities = 31/144 (21%), Positives = 60/144 (41%), Gaps = 10/144 (6%)
 Frame = -1

Query: 660 ERAPSSLRPFTIKVLLDAFYDDTEQYPFVIDGMAVSSVELLGMVT----------NKTVS 511
           +R    +RP TIK +L+A          V+DG  V+   ++G V              ++
Sbjct: 24  QRRQHPIRPLTIKQMLEA--QSVGGGVMVVDGREVTQATVVGRVVGYENANMASGGGAIT 81

Query: 510 MDHCTFDLYDGTGAVNVIYWFEGAQDSKDAWSFSNGMYVRVVGRTTSMEQFFQIKAYIVR 331
             H  + + D TG + V  W +  +  +         +VR  G T ++ Q   I    V 
Sbjct: 82  AKHFGYRITDNTGMIVVRQWIDADRAQE---PIPLNTHVRASG-TVNVWQQSPIVTGTVV 137

Query: 330 PINNFNDVTHHFIYCIYAHIDISR 259
            + + N++ +H +  I  H+ +++
Sbjct: 138 SMADSNEMNYHMLDAILTHLRLTQ 161

>PI5K7_ARATH (Q9SUI2) Phosphatidylinositol-4-phosphate 5-kinase 7 (EC 2.7.1.68)|
           (AtPIP5K7) (1-phosphatidylinositol-4-phosphate kinase 7)
           (PtdIns(4)P-5-kinase 7) (Diphosphoinositide kinase 7)
           (AtP5K2)
          Length = 754

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = -1

Query: 507 DHCTFDLYDGTGAVNVIYWFEGAQDSKDAWSFSNG 403
           ++C  DLYDG        W EG QD + ++S++NG
Sbjct: 101 EYCNSDLYDGL-------WKEGLQDGRGSYSWTNG 128

>IF4E3_MOUSE (Q8BMB3) Eukaryotic translation initiation factor 4E type 3 (eIF4E|
           type 3) (eIF-4E type 3) (mRNA cap-binding protein type
           3) (Eukaryotic translation initiation factor 4E-like 3)
           (eIF4E-like protein 4E-LP)
          Length = 245

 Score = 30.0 bits (66), Expect = 6.9
 Identities = 15/56 (26%), Positives = 28/56 (50%)
 Frame = -1

Query: 465 NVIYWFEGAQDSKDAWSFSNGMYVRVVGRTTSMEQFFQIKAYIVRPINNFNDVTHH 298
           N  +W+      +   S S    ++ +G   S+EQF++  +++VRP     D+T H
Sbjct: 59  NYTFWYSRRTPGRPTSSQSYEQNIKQIGTFASVEQFWKFYSHMVRP----GDLTGH 110

>IF4E3_HUMAN (O60573) Eukaryotic translation initiation factor 4E type 3 (eIF4E|
           type 3) (eIF-4E type 3) (mRNA cap-binding protein type
           3) (Eukaryotic translation initiation factor 4E-like 3)
           (Eukaryotic translation initiation factor 4E homologous
           protein)
          Length = 245

 Score = 30.0 bits (66), Expect = 6.9
 Identities = 15/56 (26%), Positives = 28/56 (50%)
 Frame = -1

Query: 465 NVIYWFEGAQDSKDAWSFSNGMYVRVVGRTTSMEQFFQIKAYIVRPINNFNDVTHH 298
           N  +W+      +   S S    ++ +G   S+EQF++  +++VRP     D+T H
Sbjct: 59  NYTFWYSRRTPGRPTSSQSYEQNIKQIGTFASVEQFWRFYSHMVRP----GDLTGH 110

>MYOM1_MOUSE (Q62234) Myomesin-1 (Skelemin)|
          Length = 1666

 Score = 29.6 bits (65), Expect = 9.0
 Identities = 24/108 (22%), Positives = 46/108 (42%), Gaps = 11/108 (10%)
 Frame = -1

Query: 633 FTIKVLLDAFYDDTEQYPFV------IDGMAVSSVELLGMVTNKTVSMDHCTFDLYDGTG 472
           +TI+V +  +Y+    Y FV      I+G   + ++++ +  NK   +        DG G
Sbjct: 459 YTIRVRMGEYYEQYSAYVFVRDADAEIEGAPAAPLDVVSLDANKDYIIISWKQPAVDG-G 517

Query: 471 AVNVIYWFEGAQDSKDAWSFSNGMYVR-----VVGRTTSMEQFFQIKA 343
           +  + Y+ +  +   D WS  N   V+     V G        F+++A
Sbjct: 518 SPILGYFIDKCEVGTDTWSQCNDTPVKFARFPVTGLIEGRSYIFRVRA 565


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 100,942,343
Number of Sequences: 219361
Number of extensions: 2110536
Number of successful extensions: 5429
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 5308
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5426
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6825954960
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)