ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal4m08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 72 3e-09
2dbj|AP004851.3| Oryza sativa (japonica cultivar-group) genomic D... 72 3e-09
3dbj|AP004049.2| Oryza sativa (japonica cultivar-group) genomic D... 72 3e-09
4dbj|AP006720.1| Oryza sativa (japonica cultivar-group) genomic D... 72 3e-09
5dbj|AK122164.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 3e-09
6dbj|AK106550.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 2e-04
7gb|BT018888.1| Zea mays clone EL01T0205G11.d mRNA sequence 50 0.010
8emb|AJ563423.1|ZMA563423 Zea mays partial ivr2b pseudogene 50 0.010
9ref|XM_550450.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.15
10gb|AF149806.1| Oryza sativa hypothetical protein, fertilin alpha... 46 0.15
11dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.15
12dbj|AP001129.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.15
13dbj|AK106556.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.15
14gb|AC165958.2| Mus musculus BAC clone RP23-417I20 from chromosom... 42 2.3
15gb|AC169508.1| Mus musculus BAC clone RP23-167I21 from chromosom... 42 2.3
16emb|AL021483.1|CEY38H8A Caenorhabditis elegans YAC Y38H8A, compl... 42 2.3
17gb|AY258862.1| Xiphophorus maculatus microsatellite Msb038 sequence 40 9.3
18gb|AC175380.2| Mus musculus BAC clone RP24-333L5 from chromosome... 40 9.3
19gb|AC109807.9| Mus musculus chromosome 1, clone RP23-433B11, com... 40 9.3
20ref|NM_146250.1| Mus musculus G protein-coupled receptor 1 (Gpr1... 40 9.3
21gb|AC157805.3| Mus musculus chromosome 1, clone RP24-324B17, com... 40 9.3
22gb|AC140347.3| Mus musculus BAC clone RP23-233K3 from chromosome... 40 9.3
23gb|AC101758.6| Mus musculus chromosome 1, clone RP24-75F14, comp... 40 9.3
24gb|AC110815.6| Mus musculus BAC clone RP23-2I10 from chromosome ... 40 9.3
25ref|XM_742667.1| Aspergillus fumigatus Af293 hypothetical protei... 40 9.3
26gb|AC115295.4| Mus musculus BAC clone RP23-188O19 from 3, comple... 40 9.3
27ref|XM_947108.1| Theileria annulata strain Ankara ATP-dependent ... 40 9.3
28gb|AC144343.8| Medicago truncatula clone mth2-12c21, complete se... 40 9.3
29emb|Z82202.1|HS34P24 Human DNA sequence from clone RP1-34P24 on ... 40 9.3
30gb|AC164005.2| Mus musculus chromosome 1, clone RP24-312J21, com... 40 9.3
31emb|AL645950.13| Mouse DNA sequence from clone RP23-13C17 on chr... 40 9.3
32gb|BC032934.1| Mus musculus G protein-coupled receptor 1, mRNA (... 40 9.3
33gb|AC103830.2| Homo sapiens chromosome 8, clone CTD-2563K22, com... 40 9.3
34gb|AC098648.2| Homo sapiens chromosome 3 clone RP11-240N7, compl... 40 9.3
35emb|BX005102.6| Zebrafish DNA sequence from clone CH211-105H13 i... 40 9.3
36gb|AC154911.4| Mus musculus BAC clone RP23-25I3 from chromosome ... 40 9.3
37gb|AC154817.2| Mus musculus BAC clone RP23-72G6 from chromosome ... 40 9.3
38gb|AC154203.2| Mus musculus BAC clone RP24-387L1 from chromosome... 40 9.3
39gb|AC161493.6| Mus musculus chromosome 1, clone RP24-77I21, comp... 40 9.3
40ref|XM_393457.2| PREDICTED: Apis mellifera similar to ENSANGP000... 40 9.3
41gb|AC018685.12| Homo sapiens BAC clone RP11-455M16 from 2, compl... 40 9.3
42emb|BX323575.10| Zebrafish DNA sequence from clone CH211-278N20 ... 40 9.3
43dbj|BS000163.1| Pan troglodytes chromosome 22 clone:RP43-010B02,... 40 9.3
44dbj|AK129580.1| Homo sapiens cDNA FLJ26069 fis, clone PRS08323 40 9.3
45gb|AC107673.9| Mus musculus chromosome 1, clone RP24-263O21, com... 40 9.3
46gb|AY107587.1| Zea mays PCO129703 mRNA sequence 40 9.3
47emb|AL935211.7| Zebrafish DNA sequence from clone CH211-227L1, c... 40 9.3
48gb|AC159636.3| Mus musculus BAC clone RP24-93H15 from chromosome... 40 9.3
49gb|AC139243.4| Mus musculus BAC clone RP23-440G4 from 3, complet... 40 9.3
50emb|CT030126.6| Mouse DNA sequence from clone RP23-430F12 on chr... 40 9.3
51gb|M62985.1|MZESMDPK Maize putative protein kinase mRNA, 3' end 40 9.3 
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
              complete sequence
          Length = 35954743

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 63/72 (87%)
 Strand = Plus / Minus

                                                                          
Query: 550    tcagagctcaacctcgtgaagatcctccgttaaaccggtaaactggacggacgagttgct 609
              ||||||||||||||| ||||||||||| || |||| | | ||||| || || ||||||||
Sbjct: 285795 tcagagctcaacctcatgaagatcctctgtcaaactgttgaactgaacagatgagttgct 285736

                          
Query: 610    gttggaacgact 621
              ||||||||||||
Sbjct: 285735 gttggaacgact 285724
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>dbj|AP004851.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1359_D06
          Length = 146805

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 63/72 (87%)
 Strand = Plus / Minus

                                                                         
Query: 550   tcagagctcaacctcgtgaagatcctccgttaaaccggtaaactggacggacgagttgct 609
             ||||||||||||||| ||||||||||| || |||| | | ||||| || || ||||||||
Sbjct: 14579 tcagagctcaacctcatgaagatcctctgtcaaactgttgaactgaacagatgagttgct 14520

                         
Query: 610   gttggaacgact 621
             ||||||||||||
Sbjct: 14519 gttggaacgact 14508
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>dbj|AP004049.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1212_C06
          Length = 110989

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 63/72 (87%)
 Strand = Plus / Minus

                                                                         
Query: 550   tcagagctcaacctcgtgaagatcctccgttaaaccggtaaactggacggacgagttgct 609
             ||||||||||||||| ||||||||||| || |||| | | ||||| || || ||||||||
Sbjct: 95770 tcagagctcaacctcatgaagatcctctgtcaaactgttgaactgaacagatgagttgct 95711

                         
Query: 610   gttggaacgact 621
             ||||||||||||
Sbjct: 95710 gttggaacgact 95699
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>dbj|AP006720.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
             clone:OJA1212_C06
          Length = 113554

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 63/72 (87%)
 Strand = Plus / Minus

                                                                         
Query: 550   tcagagctcaacctcgtgaagatcctccgttaaaccggtaaactggacggacgagttgct 609
             ||||||||||||||| ||||||||||| || |||| | | ||||| || || ||||||||
Sbjct: 98335 tcagagctcaacctcatgaagatcctctgtcaaactgttgaactgaacagatgagttgct 98276

                         
Query: 610   gttggaacgact 621
             ||||||||||||
Sbjct: 98275 gttggaacgact 98264
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>dbj|AK122164.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033147K10, full
            insert sequence
          Length = 5501

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 63/72 (87%)
 Strand = Plus / Minus

                                                                        
Query: 550  tcagagctcaacctcgtgaagatcctccgttaaaccggtaaactggacggacgagttgct 609
            ||||||||||||||| ||||||||||| || |||| | | ||||| || || ||||||||
Sbjct: 4848 tcagagctcaacctcatgaagatcctctgtcaaactgttgaactgaacagatgagttgct 4789

                        
Query: 610  gttggaacgact 621
            ||||||||||||
Sbjct: 4788 gttggaacgact 4777
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>dbj|AK106550.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-G03, full
           insert sequence
          Length = 1647

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 62/72 (86%), Gaps = 1/72 (1%)
 Strand = Plus / Minus

                                                                       
Query: 550 tcagagctcaacctcgtgaagatcctccgttaaaccggtaaactggacggacgagttgct 609
           |||||||||||||||  |||||||||| || |||| | | ||||| || || ||||||||
Sbjct: 994 tcagagctcaacctca-gaagatcctctgtcaaactgttgaactgaacagatgagttgct 936

                       
Query: 610 gttggaacgact 621
           ||||||||||||
Sbjct: 935 gttggaacgact 924
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>gb|BT018888.1| Zea mays clone EL01T0205G11.d mRNA sequence
          Length = 1902

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 548  tgtcagagctcaacctcgtgaagatcctc 576
            ||||||||||| |||||||||||||||||
Sbjct: 1629 tgtcagagctccacctcgtgaagatcctc 1601
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>emb|AJ563423.1|ZMA563423 Zea mays partial ivr2b pseudogene
          Length = 7411

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 61/73 (83%)
 Strand = Plus / Minus

                                                                        
Query: 552  agagctcaacctcgtgaagatcctccgttaaaccggtaaactggacggacgagttgctgt 611
            ||||||| ||||| ||||||||||| || || ||  | | ||| || || ||||||||||
Sbjct: 3363 agagctcgacctcatgaagatcctctgtcaatccattgagctgcactgatgagttgctgt 3304

                         
Query: 612  tggaacgactgtg 624
            |||||||||||||
Sbjct: 3303 tggaacgactgtg 3291
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>ref|XM_550450.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2157

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 550  tcagagctcaacctcgtgaagatcctc 576
            ||||||||| |||||||||||||||||
Sbjct: 1819 tcagagctctacctcgtgaagatcctc 1793
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>gb|AF149806.1| Oryza sativa hypothetical protein, fertilin alpha subunit, membrane
             protein homolog, and Myb-related protein genes, complete
             cds; and unknown gene
          Length = 33178

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 550   tcagagctcaacctcgtgaagatcctc 576
             ||||||||| |||||||||||||||||
Sbjct: 12092 tcagagctctacctcgtgaagatcctc 12118
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
              complete sequence
          Length = 30731886

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 550    tcagagctcaacctcgtgaagatcctc 576
              ||||||||| |||||||||||||||||
Sbjct: 386576 tcagagctctacctcgtgaagatcctc 386602
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>dbj|AP001129.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0644B06
          Length = 194509

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 550   tcagagctcaacctcgtgaagatcctc 576
             ||||||||| |||||||||||||||||
Sbjct: 96529 tcagagctctacctcgtgaagatcctc 96555
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>dbj|AK106556.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-H03, full
            insert sequence
          Length = 2157

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 550  tcagagctcaacctcgtgaagatcctc 576
            ||||||||| |||||||||||||||||
Sbjct: 1819 tcagagctctacctcgtgaagatcctc 1793
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>gb|AC165958.2| Mus musculus BAC clone RP23-417I20 from chromosome 16, complete sequence
          Length = 186202

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 21     acaagtataacaacaacaaca 41
              |||||||||||||||||||||
Sbjct: 133596 acaagtataacaacaacaaca 133616
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>gb|AC169508.1| Mus musculus BAC clone RP23-167I21 from chromosome 16, complete
             sequence
          Length = 211870

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 21    acaagtataacaacaacaaca 41
             |||||||||||||||||||||
Sbjct: 86118 acaagtataacaacaacaaca 86138
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>emb|AL021483.1|CEY38H8A Caenorhabditis elegans YAC Y38H8A, complete sequence
          Length = 35077

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 306   aaatactcaaaaaaccaagac 326
             |||||||||||||||||||||
Sbjct: 24893 aaatactcaaaaaaccaagac 24913
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>gb|AY258862.1| Xiphophorus maculatus microsatellite Msb038 sequence
          Length = 494

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 534 gccgtcacctcacctgtcag 553
           ||||||||||||||||||||
Sbjct: 243 gccgtcacctcacctgtcag 224
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>gb|AC175380.2| Mus musculus BAC clone RP24-333L5 from chromosome 13, complete
            sequence
          Length = 164055

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 274  aaatacataataacaaacaa 293
            ||||||||||||||||||||
Sbjct: 1995 aaatacataataacaaacaa 1976
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>gb|AC109807.9| Mus musculus chromosome 1, clone RP23-433B11, complete sequence
          Length = 227679

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 406   ggcctgttcatctctgtccc 425
             ||||||||||||||||||||
Sbjct: 52206 ggcctgttcatctctgtccc 52225
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>ref|NM_146250.1| Mus musculus G protein-coupled receptor 1 (Gpr1), mRNA
          Length = 1647

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 18  cagacaagtataacaacaac 37
           ||||||||||||||||||||
Sbjct: 707 cagacaagtataacaacaac 688
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>gb|AC157805.3| Mus musculus chromosome 1, clone RP24-324B17, complete sequence
          Length = 212185

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 514    ttgtgtgggcattatgctga 533
              ||||||||||||||||||||
Sbjct: 187550 ttgtgtgggcattatgctga 187531
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>gb|AC140347.3| Mus musculus BAC clone RP23-233K3 from chromosome 7, complete
            sequence
          Length = 153366

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 22   caagtataacaacaacaaca 41
            ||||||||||||||||||||
Sbjct: 9226 caagtataacaacaacaaca 9245
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>gb|AC101758.6| Mus musculus chromosome 1, clone RP24-75F14, complete sequence
          Length = 268826

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 406    ggcctgttcatctctgtccc 425
              ||||||||||||||||||||
Sbjct: 133657 ggcctgttcatctctgtccc 133676
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>gb|AC110815.6| Mus musculus BAC clone RP23-2I10 from chromosome 12, complete sequence
          Length = 186797

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 278   acataataacaaacaacatatagc 301
             ||||||||| ||||||||||||||
Sbjct: 99867 acataataaaaaacaacatatagc 99890
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>ref|XM_742667.1| Aspergillus fumigatus Af293 hypothetical protein (Afu6g03160) partial
            mRNA
          Length = 3786

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 609  tgttggaacgactgtgcgag 628
            ||||||||||||||||||||
Sbjct: 1977 tgttggaacgactgtgcgag 1958
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>gb|AC115295.4| Mus musculus BAC clone RP23-188O19 from 3, complete sequence
          Length = 202201

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 305   taaatactcaaaaaaccaag 324
             ||||||||||||||||||||
Sbjct: 91203 taaatactcaaaaaaccaag 91184
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>ref|XM_947108.1| Theileria annulata strain Ankara ATP-dependent RNA helicase (TA13610)
            partial mRNA
          Length = 3084

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 101  tatcttctattctcatcaaa 120
            ||||||||||||||||||||
Sbjct: 1627 tatcttctattctcatcaaa 1608
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>gb|AC144343.8| Medicago truncatula clone mth2-12c21, complete sequence
          Length = 130740

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 271   agtaaatacataataacaaa 290
             ||||||||||||||||||||
Sbjct: 19473 agtaaatacataataacaaa 19492
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>emb|Z82202.1|HS34P24 Human DNA sequence from clone RP1-34P24 on chromosome 22, complete
             sequence
          Length = 105357

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 446   gctgtgaacagctcctttcacctt 469
             |||||||| |||||||||||||||
Sbjct: 63368 gctgtgaatagctcctttcacctt 63391
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>gb|AC164005.2| Mus musculus chromosome 1, clone RP24-312J21, complete sequence
          Length = 159540

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 514   ttgtgtgggcattatgctga 533
             ||||||||||||||||||||
Sbjct: 56929 ttgtgtgggcattatgctga 56910
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>emb|AL645950.13| Mouse DNA sequence from clone RP23-13C17 on chromosome 1 Contains the
             Eef1b2 gene for eukaryotic translation elongation factor 1
             beta 2, the Ndufs1 gene for NADH dehydrogenase
             (ubiquinone) Fe-S protein 1 (Ndufs1), the Gpr1 gene for
             G-protein coupled receptor 1, the 5' end of a novel gene,
             two novel genes and two CpG islands, complete sequence
          Length = 138564

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 18    cagacaagtataacaacaac 37
             ||||||||||||||||||||
Sbjct: 78614 cagacaagtataacaacaac 78633
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>gb|BC032934.1| Mus musculus G protein-coupled receptor 1, mRNA (cDNA clone
           MGC:41704 IMAGE:1363204), complete cds
          Length = 1647

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 18  cagacaagtataacaacaac 37
           ||||||||||||||||||||
Sbjct: 707 cagacaagtataacaacaac 688
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>gb|AC103830.2| Homo sapiens chromosome 8, clone CTD-2563K22, complete sequence
          Length = 191525

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 538   tcacctcacctgtcagagct 557
             ||||||||||||||||||||
Sbjct: 47751 tcacctcacctgtcagagct 47770
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>gb|AC098648.2| Homo sapiens chromosome 3 clone RP11-240N7, complete sequence
          Length = 151924

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 196   caatggcatccagatgttgctttt 219
             |||| |||||||||||||||||||
Sbjct: 45830 caattgcatccagatgttgctttt 45853
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>emb|BX005102.6| Zebrafish DNA sequence from clone CH211-105H13 in linkage group 8,
              complete sequence
          Length = 154770

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 273    taaatacataataacaaaca 292
              ||||||||||||||||||||
Sbjct: 132505 taaatacataataacaaaca 132524
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>gb|AC154911.4| Mus musculus BAC clone RP23-25I3 from chromosome 7, complete sequence
          Length = 228885

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 22     caagtataacaacaacaaca 41
              ||||||||||||||||||||
Sbjct: 114639 caagtataacaacaacaaca 114658
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>gb|AC154817.2| Mus musculus BAC clone RP23-72G6 from chromosome 13, complete sequence
          Length = 143739

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 274   aaatacataataacaaacaa 293
             ||||||||||||||||||||
Sbjct: 31486 aaatacataataacaaacaa 31467
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>gb|AC154203.2| Mus musculus BAC clone RP24-387L1 from chromosome 13, complete sequence
          Length = 174845

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 274   aaatacataataacaaacaa 293
             ||||||||||||||||||||
Sbjct: 20165 aaatacataataacaaacaa 20184
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>gb|AC161493.6| Mus musculus chromosome 1, clone RP24-77I21, complete sequence
          Length = 226794

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 406    ggcctgttcatctctgtccc 425
              ||||||||||||||||||||
Sbjct: 209710 ggcctgttcatctctgtccc 209729
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>ref|XM_393457.2| PREDICTED: Apis mellifera similar to ENSANGP00000004412
           (LOC409968), mRNA
          Length = 4476

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 196 caatggcatccagatgttgc 215
           ||||||||||||||||||||
Sbjct: 740 caatggcatccagatgttgc 759
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>gb|AC018685.12| Homo sapiens BAC clone RP11-455M16 from 2, complete sequence
          Length = 173381

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 408    cctgttcatctctgtccctg 427
              ||||||||||||||||||||
Sbjct: 142802 cctgttcatctctgtccctg 142821
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>emb|BX323575.10| Zebrafish DNA sequence from clone CH211-278N20 in linkage group 18,
             complete sequence
          Length = 151144

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 93    attatctctatcttctattc 112
             ||||||||||||||||||||
Sbjct: 64610 attatctctatcttctattc 64629
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>dbj|BS000163.1| Pan troglodytes chromosome 22 clone:RP43-010B02, map 22, complete
              sequences
          Length = 182740

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 306    aaatactcaaaaaaccaaga 325
              ||||||||||||||||||||
Sbjct: 137853 aaatactcaaaaaaccaaga 137872
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>dbj|AK129580.1| Homo sapiens cDNA FLJ26069 fis, clone PRS08323
          Length = 1965

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 538  tcacctcacctgtcagagct 557
            ||||||||||||||||||||
Sbjct: 1620 tcacctcacctgtcagagct 1639
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>gb|AC107673.9| Mus musculus chromosome 1, clone RP24-263O21, complete sequence
          Length = 168540

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 514   ttgtgtgggcattatgctga 533
             ||||||||||||||||||||
Sbjct: 68257 ttgtgtgggcattatgctga 68238
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>gb|AY107587.1| Zea mays PCO129703 mRNA sequence
          Length = 508

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 174 gggtagaggcggattatctgtacaatggcatc 205
           |||||| ||| |||||||||||||| ||||||
Sbjct: 494 gggtaggggcagattatctgtacaagggcatc 463
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>emb|AL935211.7| Zebrafish DNA sequence from clone CH211-227L1, complete sequence
          Length = 152485

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 452   aacagctcctttcaccttttaact 475
             |||||||| |||||||||||||||
Sbjct: 32931 aacagctcttttcaccttttaact 32954
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>gb|AC159636.3| Mus musculus BAC clone RP24-93H15 from chromosome 12, complete sequence
          Length = 184821

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 28     taacaacaacaacactttct 47
              ||||||||||||||||||||
Sbjct: 104019 taacaacaacaacactttct 104000
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>gb|AC139243.4| Mus musculus BAC clone RP23-440G4 from 3, complete sequence
          Length = 198621

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 305    taaatactcaaaaaaccaag 324
              ||||||||||||||||||||
Sbjct: 146680 taaatactcaaaaaaccaag 146699
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>emb|CT030126.6| Mouse DNA sequence from clone RP23-430F12 on chromosome 12, complete
              sequence
          Length = 208848

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 278    acataataacaaacaacatatagc 301
              ||||||||| ||||||||||||||
Sbjct: 168910 acataataaaaaacaacatatagc 168933
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>gb|M62985.1|MZESMDPK Maize putative protein kinase mRNA, 3' end
          Length = 1663

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 174  gggtagaggcggattatctgtacaatggcatc 205
            |||||| ||| |||||||||||||| ||||||
Sbjct: 1461 gggtaggggcagattatctgtacaagggcatc 1430


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,337,956
Number of Sequences: 3902068
Number of extensions: 6337956
Number of successful extensions: 139757
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 139569
Number of HSP's gapped (non-prelim): 186
length of query: 678
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 655
effective length of database: 17,143,297,704
effective search space: 11228859996120
effective search space used: 11228859996120
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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