ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal5b01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1emb|AL162723.12| Human DNA sequence from clone RP13-428K23 on ch... 48 0.025
2emb|CR548612.1| Paramecium tetraurelia macronuclear largest chro... 48 0.025
3gb|AC010905.3|AC010905 Homo sapiens BAC clone RP11-560B8 from Y,... 48 0.025
4gb|AC024226.11|AC024226 Genomic Sequence For Arabidopsis thalian... 46 0.097
5ref|XM_949082.1| Theileria annulata strain Ankara hypothetical p... 44 0.38
6ref|XM_949084.1| Theileria annulata strain Ankara hypothetical p... 44 0.38
7emb|AL844881.5| Mouse DNA sequence from clone RP23-244B19 on chr... 44 0.38
8emb|AJ291830.1|TAN291830 Theileria annulata TashAT3 gene 44 0.38
9emb|AJ291829.1|TAN291829 Theileria annulata TashAT1 gene 44 0.38
10gb|AY294392.1| Schizymenia sp. 3 ribulose-1,5-bisphosphate carbo... 42 1.5
11gb|AY294391.1| Schizymenia sp. 2 ribulose-1,5-bisphosphate carbo... 42 1.5
12gb|AY294389.1| Schizymenia dubyi ribulose-1,5-bisphosphate carbo... 42 1.5
13gb|AY294388.1| Schizymenia dubyi ribulose-1,5-bisphosphate carbo... 42 1.5
14gb|AC132347.4| Mus musculus BAC clone RP24-186F6 from chromosome... 42 1.5
15gb|AY388978.1| Uncultured bacterium clone PPJZSU17 ribulose-1,5-... 42 1.5
16emb|AJ868485.1| Grateloupia filicina partial rbcL gene for ribul... 42 1.5
17emb|BX571833.6| Zebrafish DNA sequence from clone DKEY-287J13, c... 42 1.5
18gb|AF254150.1|AF254150 Abroteia sp. SF2000 ribulose-1,5-bisphosp... 42 1.5
19gb|AC012360.7| Homo sapiens BAC clone RP11-332H14 from 2, comple... 42 1.5
20gb|AC164541.3| Mus musculus chromosome 1, clone RP24-172N7, comp... 42 1.5
21gb|AC105073.16| Mus musculus chromosome 1, clone RP23-288J11, co... 42 1.5
22gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 6.0
23gb|AF286887.4| Homo sapiens chromosome 8 clone RP11-206N20 map q... 40 6.0
24gb|AC011292.3| Homo sapiens BAC clone RP11-69N1 from 7, complete... 40 6.0
25gb|AC145906.2| Pan troglodytes BAC clone RP43-9J5 from 7, comple... 40 6.0
26ref|XM_567637.1| Cryptococcus neoformans var. neoformans JEC21 p... 40 6.0
27emb|AL032618.1|CEY42A5A Caenorhabditis elegans YAC Y42A5A, compl... 40 6.0
28gb|AC004926.2| Homo sapiens PAC clone RP5-910H9 from 7, complete... 40 6.0
29gb|AC005099.2| Homo sapiens BAC clone CTA-351J1 from 7, complete... 40 6.0
30gb|AC122726.21| Medicago truncatula clone mth2-23o24, complete s... 40 6.0
31emb|Z82185.1|HS24E5 Human DNA sequence from clone CITF22-24E5 on... 40 6.0
32emb|AL049691.18|HSJ1123D4 Human DNA sequence from clone RP5-1123... 40 6.0
33gb|AC163356.2| Mus musculus BAC clone RP23-13A21 from chromosome... 40 6.0
34emb|BX571865.1| Photorhabdus luminescens subsp. laumondii TTO1 c... 40 6.0
35emb|AL161499.2|ATCHRIV11 Arabidopsis thaliana DNA chromosome 4, ... 40 6.0
36gb|AC104350.6| Homo sapiens chromosome 8, clone RP11-1112C15, co... 40 6.0
37gb|AC006284.4| Arabidopsis thaliana chromosome 2 clone T4M8 map ... 40 6.0
38gb|AC159129.4| Mus musculus BAC clone RP23-472N21 from chromosom... 40 6.0
39dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
40gb|AC104812.5| Homo sapiens BAC clone RP11-656O23 from 2, comple... 40 6.0
41gb|AC079235.7| Homo sapiens BAC clone RP11-495O23 from 2, comple... 40 6.0
42gb|AC115592.2| Dictyostelium discoideum chromosome 2 map 1-12595... 40 6.0
43gb|AC063956.7|AC063956 Homo sapiens 4 BAC RP11-529K3 (Roswell Pa... 40 6.0
44dbj|AP003270.4| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
45dbj|AP003286.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
46gb|AC124758.6| Mus musculus BAC clone RP23-123I10 from chromosom... 40 6.0
47gb|AF245484.1|AF245484 Oryza sativa OSE2 (OSE2) gene, complete cds 40 6.0
48dbj|BS000027.1| Pan troglodytes chromosome 22 clone:PTB-075O22, ... 40 6.0
49gb|AE001439.1| Helicobacter pylori J99, complete genome 40 6.0
50dbj|AP003419.3| Homo sapiens genomic DNA, chromosome 11 clone:CT... 40 6.0
51dbj|AP001667.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 6.0
52gb|AY642926.1| Hordeum vulgare BAC CC24_14, complete sequence 40 6.0
53gb|AF076274.1|T27D20 Arabidopsis thaliana BAC T27D20 40 6.0
54gb|AC147617.3| Mus musculus BAC clone RP23-442G17 from 6, comple... 40 6.0
55gb|M31077.1|HUMSTATH1 Human salivary statherin gene, 5' flank 40 6.0
56dbj|AP001172.1| Homo sapiens genomic DNA, chromosome 21q21.1-q21... 40 6.0
57dbj|AP001184.4| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 6.0

>emb|AL162723.12| Human DNA sequence from clone RP13-428K23 on chromosome X, complete
             sequence
          Length = 192780

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 31    tagaaaatattggtattcaaactt 54
             ||||||||||||||||||||||||
Sbjct: 15008 tagaaaatattggtattcaaactt 14985



 Score = 46.1 bits (23), Expect = 0.097
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 32    agaaaatattggtattcaaactt 54
             |||||||||||||||||||||||
Sbjct: 14960 agaaaatattggtattcaaactt 14938



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>emb|CR548612.1| Paramecium tetraurelia macronuclear largest chromosome, complete sequence
          Length = 984602

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 43     gtattcaaactttaaaatttcaaa 66
              ||||||||||||||||||||||||
Sbjct: 475934 gtattcaaactttaaaatttcaaa 475957



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>gb|AC010905.3|AC010905 Homo sapiens BAC clone RP11-560B8 from Y, complete sequence
          Length = 152599

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 31     tagaaaatattggtattcaaactt 54
              ||||||||||||||||||||||||
Sbjct: 128792 tagaaaatattggtattcaaactt 128769



 Score = 46.1 bits (23), Expect = 0.097
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 32     agaaaatattggtattcaaactt 54
              |||||||||||||||||||||||
Sbjct: 128744 agaaaatattggtattcaaactt 128722



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>gb|AC024226.11|AC024226 Genomic Sequence For Arabidopsis thaliana Clone T32B03 From Chromosome
             V, complete sequence
          Length = 96262

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 49    aaactttaaaatttcaaaataca 71
             |||||||||||||||||||||||
Sbjct: 24012 aaactttaaaatttcaaaataca 24034



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 48    caaactttaaaatttcaaaa 67
             ||||||||||||||||||||
Sbjct: 22668 caaactttaaaatttcaaaa 22687



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>ref|XM_949082.1| Theileria annulata strain Ankara hypothetical protein (TA20082)
           partial mRNA
          Length = 2985

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 31  tagaaaatattggtattcaaac 52
           ||||||||||||||||||||||
Sbjct: 929 tagaaaatattggtattcaaac 950



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>ref|XM_949084.1| Theileria annulata strain Ankara hypothetical protein (TA20085)
           partial mRNA
          Length = 1398

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 31  tagaaaatattggtattcaaac 52
           ||||||||||||||||||||||
Sbjct: 926 tagaaaatattggtattcaaac 947



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>emb|AL844881.5| Mouse DNA sequence from clone RP23-244B19 on chromosome 2, complete
              sequence
          Length = 219340

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 15     aattgataaataaaggtagaaa 36
              ||||||||||||||||||||||
Sbjct: 159137 aattgataaataaaggtagaaa 159158



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>emb|AJ291830.1|TAN291830 Theileria annulata TashAT3 gene
          Length = 3360

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 31   tagaaaatattggtattcaaac 52
            ||||||||||||||||||||||
Sbjct: 1073 tagaaaatattggtattcaaac 1094



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>emb|AJ291829.1|TAN291829 Theileria annulata TashAT1 gene
          Length = 1921

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 31   tagaaaatattggtattcaaac 52
            ||||||||||||||||||||||
Sbjct: 979  tagaaaatattggtattcaaac 1000



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>gb|AY294392.1| Schizymenia sp. 3 ribulose-1,5-bisphosphate carboxylase/oxygenase
           large subunit (rbcL) gene, partial cds; chloroplast gene
           for chloroplast product
          Length = 1459

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 2   atgaatggctgagaattgata 22
           |||||||||||||||||||||
Sbjct: 639 atgaatggctgagaattgata 619



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>gb|AY294391.1| Schizymenia sp. 2 ribulose-1,5-bisphosphate carboxylase/oxygenase
           large subunit (rbcL) gene, partial cds; chloroplast gene
           for chloroplast product
          Length = 1425

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 2   atgaatggctgagaattgata 22
           |||||||||||||||||||||
Sbjct: 605 atgaatggctgagaattgata 585



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>gb|AY294389.1| Schizymenia dubyi ribulose-1,5-bisphosphate carboxylase/oxygenase
           large subunit (rbcL) gene, partial cds; chloroplast gene
           for chloroplast product
          Length = 1349

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 2   atgaatggctgagaattgata 22
           |||||||||||||||||||||
Sbjct: 529 atgaatggctgagaattgata 509



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>gb|AY294388.1| Schizymenia dubyi ribulose-1,5-bisphosphate carboxylase/oxygenase
           large subunit (rbcL) gene, partial cds; chloroplast gene
           for chloroplast product
          Length = 1458

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 2   atgaatggctgagaattgata 22
           |||||||||||||||||||||
Sbjct: 638 atgaatggctgagaattgata 618



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>gb|AC132347.4| Mus musculus BAC clone RP24-186F6 from chromosome 13, complete sequence
          Length = 155751

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 297    tttgtatacttctcaactgtttgaa 321
              |||||||||||||||| ||||||||
Sbjct: 118318 tttgtatacttctcaattgtttgaa 118294



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>gb|AY388978.1| Uncultured bacterium clone PPJZSU17 ribulose-1,5-bisphosphate
          carboxylase/oxygenase large subunit (rbcL) gene,
          partial cds
          Length = 447

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 2  atgaatggctgagaattgata 22
          |||||||||||||||||||||
Sbjct: 93 atgaatggctgagaattgata 73



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>emb|AJ868485.1| Grateloupia filicina partial rbcL gene for
           ribulose-1,5-bisphosphate carboxylase/oxygenase large
           subunit, voucher GENT HEC4604
          Length = 1259

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 2   atgaatggctgagaattgata 22
           |||||||||||||||||||||
Sbjct: 541 atgaatggctgagaattgata 521



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>emb|BX571833.6| Zebrafish DNA sequence from clone DKEY-287J13, complete sequence
          Length = 198050

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 316   tttgaaattagccatggcaag 336
             |||||||||||||||||||||
Sbjct: 47046 tttgaaattagccatggcaag 47066



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>gb|AF254150.1|AF254150 Abroteia sp. SF2000 ribulose-1,5-bisphosphate carboxylase gene,
           partial cds
          Length = 1425

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 2   atgaatggctgagaattgata 22
           |||||||||||||||||||||
Sbjct: 605 atgaatggctgagaattgata 585



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>gb|AC012360.7| Homo sapiens BAC clone RP11-332H14 from 2, complete sequence
          Length = 200918

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 54    ttaaaatttcaaaatacatac 74
             |||||||||||||||||||||
Sbjct: 58599 ttaaaatttcaaaatacatac 58579



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>gb|AC164541.3| Mus musculus chromosome 1, clone RP24-172N7, complete sequence
          Length = 161969

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 14    gaattgataaataaaggtaga 34
             |||||||||||||||||||||
Sbjct: 38338 gaattgataaataaaggtaga 38318



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>gb|AC105073.16| Mus musculus chromosome 1, clone RP23-288J11, complete sequence
          Length = 210509

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 14    gaattgataaataaaggtaga 34
             |||||||||||||||||||||
Sbjct: 47566 gaattgataaataaaggtaga 47586



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>gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 11, complete
              sequence
          Length = 1019846

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 11     tgagaattgataaataaagg 30
              ||||||||||||||||||||
Sbjct: 242356 tgagaattgataaataaagg 242337



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>gb|AF286887.4| Homo sapiens chromosome 8 clone RP11-206N20 map q12.1, complete
             sequence
          Length = 192948

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 53    tttaaaatttcaaaatacat 72
             ||||||||||||||||||||
Sbjct: 84920 tttaaaatttcaaaatacat 84901



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>gb|AC011292.3| Homo sapiens BAC clone RP11-69N1 from 7, complete sequence
          Length = 107137

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 17    ttgataaataaaggtagaaa 36
             ||||||||||||||||||||
Sbjct: 63976 ttgataaataaaggtagaaa 63957



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>gb|AC145906.2| Pan troglodytes BAC clone RP43-9J5 from 7, complete sequence
          Length = 220120

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 17     ttgataaataaaggtagaaa 36
              ||||||||||||||||||||
Sbjct: 153822 ttgataaataaaggtagaaa 153841



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>ref|XM_567637.1| Cryptococcus neoformans var. neoformans JEC21 protein phosphatase
           type 2A regulator (CNK00750) partial mRNA
          Length = 1089

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 11  tgagaattgataaataaagg 30
           ||||||||||||||||||||
Sbjct: 434 tgagaattgataaataaagg 415



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>emb|AL032618.1|CEY42A5A Caenorhabditis elegans YAC Y42A5A, complete sequence
          Length = 22557

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 44   tattcaaactttaaaatttcaaaa 67
            ||||||||||||||||||| ||||
Sbjct: 2999 tattcaaactttaaaattttaaaa 2976



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>gb|AC004926.2| Homo sapiens PAC clone RP5-910H9 from 7, complete sequence
          Length = 153556

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 49     aaactttaaaatttcaaaat 68
              ||||||||||||||||||||
Sbjct: 134211 aaactttaaaatttcaaaat 134192



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>gb|AC005099.2| Homo sapiens BAC clone CTA-351J1 from 7, complete sequence
          Length = 131611

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 50   aactttaaaatttcaaaata 69
            ||||||||||||||||||||
Sbjct: 4443 aactttaaaatttcaaaata 4424



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>gb|AC122726.21| Medicago truncatula clone mth2-23o24, complete sequence
          Length = 130999

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 57    aaatttcaaaatacatacta 76
             ||||||||||||||||||||
Sbjct: 37958 aaatttcaaaatacatacta 37977



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>emb|Z82185.1|HS24E5 Human DNA sequence from clone CITF22-24E5 on chromosome 22, complete
             sequence
          Length = 35506

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 5     aatggctgagaattgataaataaa 28
             |||||||||||||||| |||||||
Sbjct: 14031 aatggctgagaattgagaaataaa 14054



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>emb|AL049691.18|HSJ1123D4 Human DNA sequence from clone RP5-1123D4 on chromosome 20q12 Contains
              STSs and GSSs, complete sequence
          Length = 169243

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 24     ataaaggtagaaaatattggtatt 47
              |||||||||||||||| |||||||
Sbjct: 163116 ataaaggtagaaaataatggtatt 163139



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>gb|AC163356.2| Mus musculus BAC clone RP23-13A21 from chromosome 6, complete sequence
          Length = 212612

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 291   agaaactttgtatacttctc 310
             ||||||||||||||||||||
Sbjct: 37195 agaaactttgtatacttctc 37214



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>emb|BX571865.1| Photorhabdus luminescens subsp. laumondii TTO1 complete genome; segment
             7/17
          Length = 348813

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 53    tttaaaatttcaaaatacatacta 76
             ||||||||||||||||| ||||||
Sbjct: 72401 tttaaaatttcaaaataaatacta 72378



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>emb|AL161499.2|ATCHRIV11 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 11
          Length = 198022

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 49     aaactttaaaatttcaaaat 68
              ||||||||||||||||||||
Sbjct: 176170 aaactttaaaatttcaaaat 176189



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>gb|AC104350.6| Homo sapiens chromosome 8, clone RP11-1112C15, complete sequence
          Length = 152908

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 53    tttaaaatttcaaaatacat 72
             ||||||||||||||||||||
Sbjct: 84921 tttaaaatttcaaaatacat 84902



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>gb|AC006284.4| Arabidopsis thaliana chromosome 2 clone T4M8 map CIC11A04, complete
             sequence
          Length = 89137

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 48    caaactttaaaatttcaaaa 67
             ||||||||||||||||||||
Sbjct: 62193 caaactttaaaatttcaaaa 62174



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>gb|AC159129.4| Mus musculus BAC clone RP23-472N21 from chromosome 6, complete sequence
          Length = 181390

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 54    ttaaaatttcaaaatacata 73
             ||||||||||||||||||||
Sbjct: 49671 ttaaaatttcaaaatacata 49652



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 138      acatagacaaaaacactata 157
                ||||||||||||||||||||
Sbjct: 37548873 acatagacaaaaacactata 37548892



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>gb|AC104812.5| Homo sapiens BAC clone RP11-656O23 from 2, complete sequence
          Length = 120574

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 59    atttcaaaatacatactatg 78
             ||||||||||||||||||||
Sbjct: 44806 atttcaaaatacatactatg 44787



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>gb|AC079235.7| Homo sapiens BAC clone RP11-495O23 from 2, complete sequence
          Length = 212237

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 276    tttgactccatgagaagaaa 295
              ||||||||||||||||||||
Sbjct: 112247 tttgactccatgagaagaaa 112266



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>gb|AC115592.2| Dictyostelium discoideum chromosome 2 map 1-125959 strain AX4, complete
             sequence
          Length = 125958

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 53    tttaaaatttcaaaatacatacta 76
             |||||||||||| |||||||||||
Sbjct: 17289 tttaaaatttcacaatacatacta 17312



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>gb|AC063956.7|AC063956 Homo sapiens 4 BAC RP11-529K3 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 141568

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 284   catgagaagaaactttgtat 303
             ||||||||||||||||||||
Sbjct: 36607 catgagaagaaactttgtat 36626



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>dbj|AP003270.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0505D12
          Length = 146951

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 138    acatagacaaaaacactata 157
              ||||||||||||||||||||
Sbjct: 143410 acatagacaaaaacactata 143429



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>dbj|AP003286.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0677H08
          Length = 178830

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 138  acatagacaaaaacactata 157
            ||||||||||||||||||||
Sbjct: 9347 acatagacaaaaacactata 9366



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>gb|AC124758.6| Mus musculus BAC clone RP23-123I10 from chromosome 6, complete sequence
          Length = 216956

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 54    ttaaaatttcaaaatacata 73
             ||||||||||||||||||||
Sbjct: 17552 ttaaaatttcaaaatacata 17571



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>gb|AF245484.1|AF245484 Oryza sativa OSE2 (OSE2) gene, complete cds
          Length = 4834

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  acatagacaaaaacactata 157
            ||||||||||||||||||||
Sbjct: 4737 acatagacaaaaacactata 4718



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>dbj|BS000027.1| Pan troglodytes chromosome 22 clone:PTB-075O22, map 22, complete
             sequences
          Length = 43451

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 138   acatagacaaaaacactata 157
             ||||||||||||||||||||
Sbjct: 11439 acatagacaaaaacactata 11420



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>gb|AE001439.1| Helicobacter pylori J99, complete genome
          Length = 1643831

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 316    tttgaaattagccatggcaa 335
              ||||||||||||||||||||
Sbjct: 197092 tttgaaattagccatggcaa 197073



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>dbj|AP003419.3| Homo sapiens genomic DNA, chromosome 11 clone:CTC-1337H24, complete
              sequence
          Length = 168565

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 222    tgtgaacaatggcaccccaa 241
              ||||||||||||||||||||
Sbjct: 164730 tgtgaacaatggcaccccaa 164749



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>dbj|AP001667.1| Homo sapiens genomic DNA, chromosome 21q, section 11/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 138   acatagacaaaaacactata 157
             ||||||||||||||||||||
Sbjct: 67487 acatagacaaaaacactata 67468



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>gb|AY642926.1| Hordeum vulgare BAC CC24_14, complete sequence
          Length = 184425

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 137   tacatagacaaaaacactat 156
             ||||||||||||||||||||
Sbjct: 25380 tacatagacaaaaacactat 25399



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>gb|AF076274.1|T27D20 Arabidopsis thaliana BAC T27D20
          Length = 80446

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 49    aaactttaaaatttcaaaat 68
             ||||||||||||||||||||
Sbjct: 21511 aaactttaaaatttcaaaat 21492



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>gb|AC147617.3| Mus musculus BAC clone RP23-442G17 from 6, complete sequence
          Length = 192625

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 291    agaaactttgtatacttctc 310
              ||||||||||||||||||||
Sbjct: 149042 agaaactttgtatacttctc 149061



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>gb|M31077.1|HUMSTATH1 Human salivary statherin gene, 5' flank
          Length = 1931

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 284 catgagaagaaactttgtat 303
           ||||||||||||||||||||
Sbjct: 107 catgagaagaaactttgtat 126



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>dbj|AP001172.1| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2 clone:B812E1, LL56-APP
              region, complete sequence
          Length = 149114

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 138    acatagacaaaaacactata 157
              ||||||||||||||||||||
Sbjct: 147567 acatagacaaaaacactata 147548



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>dbj|AP001184.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-715F10,
           complete sequences
          Length = 120186

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 222 tgtgaacaatggcaccccaa 241
           ||||||||||||||||||||
Sbjct: 844 tgtgaacaatggcaccccaa 863


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,059,015
Number of Sequences: 3902068
Number of extensions: 5059015
Number of successful extensions: 114670
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 114477
Number of HSP's gapped (non-prelim): 193
length of query: 444
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 422
effective length of database: 17,147,199,772
effective search space: 7236118303784
effective search space used: 7236118303784
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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