>STE12_KLULA (Q08400) Protein STE12|
          Length = 666

 Score = 36.2 bits (82), Expect = 0.085
 Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
 Frame = +2

Query: 119 HMYTNVLHLPSTACATVSQIISALSTQIGSEDCEEDVRSYNAFLCPTNFRATPKMRAF-V 295
           +M+ N+L +  +    V+ ++     Q  S D   DV S    + P+N+R+TPK   F +
Sbjct: 508 YMFCNMLAVDPSLNMGVNPVVDPFYGQNHSMDVAHDVYSPQEVVYPSNYRSTPKAAYFNM 567

Query: 296 RSPWSSVHAKATAPPSTRN 352
           RSP    + +   PPS  N
Sbjct: 568 RSP----YGRNFPPPSAMN 582

>YNR6_YEAST (P53882) Hypothetical 67.4 kDa protein in RPS3-PSD1 intergenic|
           region
          Length = 636

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 35/135 (25%), Positives = 59/135 (43%)
 Frame = +2

Query: 44  LESLFQM*ITSFYSVASLSLIDCRQHMYTNVLHLPSTACATVSQIISALSTQIGSEDCEE 223
           + S   + ++S YS   L   D R  +++     PST       +IS   T + S     
Sbjct: 172 VSSSLSLSLSSSYSDTKLFSFDSRSSIFS-----PSTPT-----VISPSYTYLSSI---- 217

Query: 224 DVRSYNAFLCPTNFRATPKMRAFVRSPWSSVHAKATAPPSTRNLAIRFFTGFSSASMISD 403
              S  +F   T    +    + + SP +  +   T P S+RN +  F++  SS S  +D
Sbjct: 218 ---SATSFQISTTSELSSSWFSTISSPSTISNKDTTCPSSSRNTSTSFYS--SSLSSTND 272

Query: 404 WSLLDSSPRTKLSPT 448
           +S +  S  +KLSP+
Sbjct: 273 FSTISKS--SKLSPS 285

>ZN434_HUMAN (Q9NX65) Zinc finger protein 434|
          Length = 485

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 27/104 (25%), Positives = 43/104 (41%), Gaps = 6/104 (5%)
 Frame = -2

Query: 385 RRETCEKPYGEVPCARRGRGLGVYTGPRAPDKGSHLWRCAEVCGAEERIVGSDIFLTIL* 206
           R  T EKPY  + C +R      ++  R    G   ++CA VCG   +I  +    +   
Sbjct: 385 RTHTGEKPYQCIVCGKRFNNSSQFSAHRRIHTGESPYKCA-VCG---KIFNNSSHFS--- 437

Query: 205 ANLRGESGDDLANCSTCR*RQMKDIG------VHMLPAVDEREG 92
           A+ +  +G+    CS C     K+        VHM   +  +EG
Sbjct: 438 AHRKTHTGEKPYRCSHCERGFTKNSALTRHQTVHMKAVLSSQEG 481

>BSN_HUMAN (Q9UPA5) Bassoon protein (Zinc-finger protein 231)|
          Length = 3925

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 3/78 (3%)
 Frame = +3

Query: 129  PMSFICRQRHVLQLARSSPLSP--RKLAQRIVRKMSDPTMRSSAPQTSAQRQR*EP-LSG 299
            P     RQ    Q  +   L P  + L Q  +++ S PT R SAP  S    + +P  S 
Sbjct: 3767 PSGAASRQPQTQQQQQGLGLQPPQQALTQARLQQQSQPTTRGSAPAASQPAGKPQPGPST 3826

Query: 300  ALGPVYTPRPRPRRAQGT 353
            A GP     PR  +  G+
Sbjct: 3827 ATGPQPAGPPRAEQTNGS 3844

>YKL4_CAEEL (P42171) Hypothetical protein C03C10.4|
          Length = 244

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 5/94 (5%)
 Frame = -3

Query: 633 CEI-LLFHHEDMGIPNEIAKIGIRQGMWGCVKRIEPGL-RAYQKARAAGEPPSPSALMAR 460
           CE  L+F+ E +GIP ++AK   +   +  +K  E  + R  Q+A A  E    S  MAR
Sbjct: 40  CETQLMFNKEMLGIPKKLAKHISKSRQFFDLKSRESEIRRCVQQAAAQFERQKTSVEMAR 99

Query: 459 INTKVGDNFVRG---LESNSDQSDIMEAEEKPVK 367
              ++  N +     L++     D++E + + VK
Sbjct: 100 EQVQILHNSLNNNQELDAEKQYVDVIEQQLELVK 133

>ITB5_PAPCY (Q07441) Integrin beta-5 (Fragment)|
          Length = 655

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = +3

Query: 519 PGVRVRFSSRIPTCPAECQSSQSHLGCPYPHGG 617
           PG       + PTCP  C + +  + CP  H G
Sbjct: 474 PGAFGEMCEKCPTCPDACSTKRDCVECPLLHSG 506

>BSN_RAT (O88778) Bassoon protein|
          Length = 3937

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 18/63 (28%), Positives = 29/63 (46%)
 Frame = +3

Query: 204  AQRIVRKMSDPTMRSSAPQTSAQRQR*EPLSGALGPVYTPRPRPRRAQGTSPYGFSQVSL 383
            +Q  +++ S PT RS+AP  S    + +P     GP   P P+P         G S+ + 
Sbjct: 3808 SQARLQQQSQPTTRSTAPAASHPAGKPQP-----GPTTAPGPQPAGLPRAEQAGSSKPAA 3862

Query: 384  RLP 392
            + P
Sbjct: 3863 KAP 3865


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 109,289,945
Number of Sequences: 219361
Number of extensions: 2645799
Number of successful extensions: 8188
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7779
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8184
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5995743495
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)