Clone Name	rbaal5a21
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	ref|XM_463949.1| Oryza sativa (japonica cultivar-group), mRNA	274	3e-70
2	dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...	274	3e-70
3	dbj|AP004885.3| Oryza sativa (japonica cultivar-group) genomic D...	274	3e-70
4	dbj|AP006754.1| Oryza sativa (japonica cultivar-group) genomic D...	274	3e-70
5	gb|AY596556.1| Saccharum officinarum clone SCJFLR1013D08, comple...	252	1e-63
6	gb|AY107844.1| Zea mays PCO146552 mRNA sequence	111	3e-21
7	dbj|AK058547.1| Oryza sativa (japonica cultivar-group) cDNA clon...	68	4e-08
8	gb|BT018884.1| Zea mays clone EL01T0205B04.d mRNA sequence	54	6e-04
9	gb|AC093718.3| Homo sapiens 12 BAC RP11-742C6 (Roswell Park Canc...	48	0.036
10	emb|AL050348.21|HSDJ447F3 Human DNA sequence from clone RP3-447F...	44	0.56
11	emb|CR790375.9| Zebrafish DNA sequence from clone CH211-251O16 i...	44	0.56
12	gb|AC169506.1| Mus musculus BAC clone RP23-417L6 from chromosome...	42	2.2
13	gb|AC149237.1| Pan troglodytes chromosome X clone RP43-049A09 ma...	42	2.2
14	gb|AC006516.10| Homo sapiens X BAC GSHB-557D6 (Genome Systems Hu...	42	2.2
15	emb|CT033749.8| Mouse DNA sequence from clone RP23-14N10 on chro...	42	2.2
16	gb|AC102146.2| Ciona savignyi, clone XX-1A8, complete sequence	40	8.7
17	ref|XM_523213.1| PREDICTED: Pan troglodytes similar to B7 homolo...	40	8.7
18	ref|XM_520353.1| PREDICTED: Pan troglodytes similar to chromosom...	40	8.7
19	gb|BC021261.1| Homo sapiens chromosome 9 open reading frame 116,...	40	8.7
20	gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 compl...	40	8.7
21	gb|AC102566.9| Mus musculus chromosome 9, clone RP23-223D10, com...	40	8.7
22	emb|BX950203.15| Zebrafish DNA sequence from clone CH211-108P22,...	40	8.7
23	gb|AE004223.1| Vibrio cholerae O1 biovar eltor str. N16961 chrom...	40	8.7
24	emb|Z74477.1|HSU42H12 Human DNA sequence from clone LL0XNC01-42H...	40	8.7
25	emb|AL513543.14| Human DNA sequence from clone RP11-343J24 on ch...	40	8.7
26	emb|AL359916.8| Human DNA sequence from clone RP11-550O8 on chro...	40	8.7
27	emb|AL357139.11| Human DNA sequence from clone RP11-793L10 on ch...	40	8.7
28	emb|AL161452.19| Human DNA sequence from clone RP11-426A6 on chr...	40	8.7
29	emb|AL133512.10| Human DNA sequence from clone RP13-131O13 on ch...	40	8.7
30	gb|AC093001.2| Homo sapiens 3 BAC RP11-206M11 (Roswell Park Canc...	40	8.7
31	dbj|AB192509.2| Sus scrofa genomic DNA, chromosome 7, BAC clone:...	40	8.7
32	dbj|AK024007.1| Homo sapiens cDNA FLJ13945 fis, clone Y79AA1000969	40	8.7
33	ref|NM_144654.1| Homo sapiens chromosome 9 open reading frame 11...	40	8.7
34	gb|AC068870.17| Homo sapiens chromosome , clone RP11-775C24, com...	40	8.7
35	gb|AC114318.2| Homo sapiens chromosome 5 clone RP11-425E13, comp...	40	8.7
36	gb|AC110009.3| Homo sapiens chromosome 5 clone RP11-508M8, compl...	40	8.7
37	dbj|AP008983.1| Bacteriophage c-st DNA, complete genome	40	8.7
38	dbj|AK147343.1| Mus musculus cDNA, RIKEN full-length enriched li...	40	8.7
39	ref|XM_693166.1| PREDICTED: Danio rerio similar to hematological...	40	8.7
40	gb|AC027808.9| Homo sapiens chromosome 15, clone RP11-351M8, com...	40	8.7
41	gb|AC026795.6| Homo sapiens chromosome 5 clone CTD-2287L22, comp...	40	8.7
42	emb|CR406001.1| Gallus gallus finished cDNA, clone ChEST634k22	40	8.7
43	gb|AC008597.8| Homo sapiens chromosome 5 clone CTB-102L23, compl...	40	8.7
44	gb|AC024564.4|AC024564 Homo sapiens chromosome 5 clone CTC-532M5...	40	8.7
45	gb|AC006032.2|AC006032 Homo sapiens BAC clone RP11-115E20 from Y...	40	8.7
46	gb|AC022188.13| Homo sapiens chromosome 15, clone RP11-8P11, com...	40	8.7
47	gb|AC138612.1| Homo sapiens BAC clone CTD-2293E22 from 2, comple...	40	8.7
48	gb|AY927868.1| Homo sapiens pierce 1 mRNA, complete cds	40	8.7
49	gb|AC117831.6| Mus musculus chromosome 15, clone RP24-106E17, co...	40	8.7
50	gb|AF119150.1|AF119150 Vibrio cholerae Rtx toxin gene cluster, c...	40	8.7
51	dbj|AP001746.1| Homo sapiens genomic DNA, chromosome 21q, sectio...	40	8.7
52	gb|DQ314867.1| Homo sapiens ceruloplasmin (ferroxidase) (CP) gen...	40	8.7
53	emb|CR450834.5| Zebrafish DNA sequence from clone CH211-237B9 in...	40	8.7
54	emb|AL731822.31| Mouse DNA sequence from clone RP23-105H6 on chr...	40	8.7
55	dbj|AP001624.1| Homo sapiens genomic DNA, chromosome 21, clone:K...	40	8.7

---

>ref|XM_463949.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1239

 Score =  274 bits (138), Expect = 3e-70
 Identities = 324/386 (83%)
 Strand = Plus / Minus

                                                                        
Query: 235  ctacaatgcgttcctctgccccacaaacttccgcgcaacgccaaagatgagagcctttgt 294
            |||||||| |||||||||||| ||||| ||||| ||||| || |||||||||||||| ||
Sbjct: 1239 ctacaatgtgttcctctgccctacaaatttccgtgcaacaccgaagatgagagccttggt 1180

                                                                        
Query: 295  caggagcccttggtccagtgtacacgccaaggccacggccccgccgagcacaaggaacct 354
            ||  |||||||| || || || || ||||  || || || || |||||||||||||||||
Sbjct: 1179 caacagcccttgatcaagagtgcaagccagagcaacagctccaccgagcacaaggaacct 1120

                                                                        
Query: 355  cgccatacggtttttcacaggtttctcttcggcttccatgatatctgattggtcactgtt 414
             || |  ||||||||| | ||||||||||| |||||||  |||||||| || ||   |||
Sbjct: 1119 tgctactcggtttttcgcgggtttctcttctgcttccacaatatctgactgatcgtcgtt 1060

                                                                        
Query: 415  ggactccagtcctcggacaaaattgtcaccgaccttggtgttgatccgtgccatcaaggc 474
            ||| |||| ||| || ||||||||||||||||||||||| |||||  | |||||||||||
Sbjct: 1059 ggattccaatccacgaacaaaattgtcaccgaccttggtattgatatgcgccatcaaggc 1000

                                                                        
Query: 475  gctcggcgaaggtggctccccagcagccctggctttctgataggcccggagtccgggttc 534
             ||| | ||   ||||||||||||||| || ||||||||||||||||| ||||| |||||
Sbjct: 999  actctgagacaatggctccccagcagctctcgctttctgataggcccgaagtccaggttc 940

                                                                        
Query: 535  gattctcttcacgcatccccacatgccctgccgaatgccaatcttcgcaatctcatttgg 594
            ||||||||| || || |||||||| |||||||||||||||||||| ||||||||||  ||
Sbjct: 939  gattctctttacacacccccacattccctgccgaatgccaatctttgcaatctcataggg 880

                                      
Query: 595  gatgcccatatcctcatggtggaaca 620
             || ||||| ||||||||||||||||
Sbjct: 879  aatacccatgtcctcatggtggaaca 854

---

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  274 bits (138), Expect = 3e-70
 Identities = 324/386 (83%)
 Strand = Plus / Plus

                                                                           
Query: 235     ctacaatgcgttcctctgccccacaaacttccgcgcaacgccaaagatgagagcctttgt 294
               |||||||| |||||||||||| ||||| ||||| ||||| || |||||||||||||| ||
Sbjct: 1289442 ctacaatgtgttcctctgccctacaaatttccgtgcaacaccgaagatgagagccttggt 1289501

                                                                           
Query: 295     caggagcccttggtccagtgtacacgccaaggccacggccccgccgagcacaaggaacct 354
               ||  |||||||| || || || || ||||  || || || || |||||||||||||||||
Sbjct: 1289502 caacagcccttgatcaagagtgcaagccagagcaacagctccaccgagcacaaggaacct 1289561

                                                                           
Query: 355     cgccatacggtttttcacaggtttctcttcggcttccatgatatctgattggtcactgtt 414
                || |  ||||||||| | ||||||||||| |||||||  |||||||| || ||   |||
Sbjct: 1289562 tgctactcggtttttcgcgggtttctcttctgcttccacaatatctgactgatcgtcgtt 1289621

                                                                           
Query: 415     ggactccagtcctcggacaaaattgtcaccgaccttggtgttgatccgtgccatcaaggc 474
               ||| |||| ||| || ||||||||||||||||||||||| |||||  | |||||||||||
Sbjct: 1289622 ggattccaatccacgaacaaaattgtcaccgaccttggtattgatatgcgccatcaaggc 1289681

                                                                           
Query: 475     gctcggcgaaggtggctccccagcagccctggctttctgataggcccggagtccgggttc 534
                ||| | ||   ||||||||||||||| || ||||||||||||||||| ||||| |||||
Sbjct: 1289682 actctgagacaatggctccccagcagctctcgctttctgataggcccgaagtccaggttc 1289741

                                                                           
Query: 535     gattctcttcacgcatccccacatgccctgccgaatgccaatcttcgcaatctcatttgg 594
               ||||||||| || || |||||||| |||||||||||||||||||| ||||||||||  ||
Sbjct: 1289742 gattctctttacacacccccacattccctgccgaatgccaatctttgcaatctcataggg 1289801

                                         
Query: 595     gatgcccatatcctcatggtggaaca 620
                || ||||| ||||||||||||||||
Sbjct: 1289802 aatacccatgtcctcatggtggaaca 1289827



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                                
Query: 36      atatatagctggaatcccttttccaaatgtaaa 68
               ||||||||||||||| |||||||||||||||||
Sbjct: 1289175 atatatagctggaattccttttccaaatgtaaa 1289207

---

>dbj|AP004885.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0575F10
          Length = 150462

 Score =  274 bits (138), Expect = 3e-70
 Identities = 324/386 (83%)
 Strand = Plus / Plus

                                                                          
Query: 235    ctacaatgcgttcctctgccccacaaacttccgcgcaacgccaaagatgagagcctttgt 294
              |||||||| |||||||||||| ||||| ||||| ||||| || |||||||||||||| ||
Sbjct: 120533 ctacaatgtgttcctctgccctacaaatttccgtgcaacaccgaagatgagagccttggt 120592

                                                                          
Query: 295    caggagcccttggtccagtgtacacgccaaggccacggccccgccgagcacaaggaacct 354
              ||  |||||||| || || || || ||||  || || || || |||||||||||||||||
Sbjct: 120593 caacagcccttgatcaagagtgcaagccagagcaacagctccaccgagcacaaggaacct 120652

                                                                          
Query: 355    cgccatacggtttttcacaggtttctcttcggcttccatgatatctgattggtcactgtt 414
               || |  ||||||||| | ||||||||||| |||||||  |||||||| || ||   |||
Sbjct: 120653 tgctactcggtttttcgcgggtttctcttctgcttccacaatatctgactgatcgtcgtt 120712

                                                                          
Query: 415    ggactccagtcctcggacaaaattgtcaccgaccttggtgttgatccgtgccatcaaggc 474
              ||| |||| ||| || ||||||||||||||||||||||| |||||  | |||||||||||
Sbjct: 120713 ggattccaatccacgaacaaaattgtcaccgaccttggtattgatatgcgccatcaaggc 120772

                                                                          
Query: 475    gctcggcgaaggtggctccccagcagccctggctttctgataggcccggagtccgggttc 534
               ||| | ||   ||||||||||||||| || ||||||||||||||||| ||||| |||||
Sbjct: 120773 actctgagacaatggctccccagcagctctcgctttctgataggcccgaagtccaggttc 120832

                                                                          
Query: 535    gattctcttcacgcatccccacatgccctgccgaatgccaatcttcgcaatctcatttgg 594
              ||||||||| || || |||||||| |||||||||||||||||||| ||||||||||  ||
Sbjct: 120833 gattctctttacacacccccacattccctgccgaatgccaatctttgcaatctcataggg 120892

                                        
Query: 595    gatgcccatatcctcatggtggaaca 620
               || ||||| ||||||||||||||||
Sbjct: 120893 aatacccatgtcctcatggtggaaca 120918



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                               
Query: 36     atatatagctggaatcccttttccaaatgtaaa 68
              ||||||||||||||| |||||||||||||||||
Sbjct: 120266 atatatagctggaattccttttccaaatgtaaa 120298

---

>dbj|AP006754.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0018H03, complete sequence
          Length = 94450

 Score =  274 bits (138), Expect = 3e-70
 Identities = 324/386 (83%)
 Strand = Plus / Plus

                                                                         
Query: 235   ctacaatgcgttcctctgccccacaaacttccgcgcaacgccaaagatgagagcctttgt 294
             |||||||| |||||||||||| ||||| ||||| ||||| || |||||||||||||| ||
Sbjct: 63471 ctacaatgtgttcctctgccctacaaatttccgtgcaacaccgaagatgagagccttggt 63530

                                                                         
Query: 295   caggagcccttggtccagtgtacacgccaaggccacggccccgccgagcacaaggaacct 354
             ||  |||||||| || || || || ||||  || || || || |||||||||||||||||
Sbjct: 63531 caacagcccttgatcaagagtgcaagccagagcaacagctccaccgagcacaaggaacct 63590

                                                                         
Query: 355   cgccatacggtttttcacaggtttctcttcggcttccatgatatctgattggtcactgtt 414
              || |  ||||||||| | ||||||||||| |||||||  |||||||| || ||   |||
Sbjct: 63591 tgctactcggtttttcgcgggtttctcttctgcttccacaatatctgactgatcgtcgtt 63650

                                                                         
Query: 415   ggactccagtcctcggacaaaattgtcaccgaccttggtgttgatccgtgccatcaaggc 474
             ||| |||| ||| || ||||||||||||||||||||||| |||||  | |||||||||||
Sbjct: 63651 ggattccaatccacgaacaaaattgtcaccgaccttggtattgatatgcgccatcaaggc 63710

                                                                         
Query: 475   gctcggcgaaggtggctccccagcagccctggctttctgataggcccggagtccgggttc 534
              ||| | ||   ||||||||||||||| || ||||||||||||||||| ||||| |||||
Sbjct: 63711 actctgagacaatggctccccagcagctctcgctttctgataggcccgaagtccaggttc 63770

                                                                         
Query: 535   gattctcttcacgcatccccacatgccctgccgaatgccaatcttcgcaatctcatttgg 594
             ||||||||| || || |||||||| |||||||||||||||||||| ||||||||||  ||
Sbjct: 63771 gattctctttacacacccccacattccctgccgaatgccaatctttgcaatctcataggg 63830

                                       
Query: 595   gatgcccatatcctcatggtggaaca 620
              || ||||| ||||||||||||||||
Sbjct: 63831 aatacccatgtcctcatggtggaaca 63856



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                              
Query: 36    atatatagctggaatcccttttccaaatgtaaa 68
             ||||||||||||||| |||||||||||||||||
Sbjct: 63204 atatatagctggaattccttttccaaatgtaaa 63236

---

>gb|AY596556.1| Saccharum officinarum clone SCJFLR1013D08, complete sequence
          Length = 1689

 Score =  252 bits (127), Expect = 1e-63
 Identities = 328/395 (83%)
 Strand = Plus / Minus

                                                                        
Query: 230  agatcctacaatgcgttcctctgccccacaaacttccgcgcaacgccaaagatgagagcc 289
            |||| ||||||||  ||||||||||| || || || ||||| ||||| ||||||||||||
Sbjct: 1361 agatgctacaatgtcttcctctgcccgacgaattttcgcgcgacgccgaagatgagagcc 1302

                                                                        
Query: 290  tttgtcaggagcccttggtccagtgtacacgccaaggccacggccccgccgagcacaagg 349
            || || ||||||||||| || || ||||| ||||  || || ||||| ||||| ||||||
Sbjct: 1301 ttcgttaggagcccttgatcaagagtacaggccagagcaactgcccctccgagtacaagg 1242

                                                                        
Query: 350  aacctcgccatacggtttttcacaggtttctcttcggcttccatgatatctgattggtca 409
            ||||| |||| | ||||  || |||| |||||||| ||||||| ||| ||||||| ||| 
Sbjct: 1241 aaccttgccacatggttcctcgcaggcttctcttctgcttccacgatttctgattcgtcg 1182

                                                                        
Query: 410  ctgttggactccagtcctcggacaaaattgtcaccgaccttggtgttgatccgtgccatc 469
            ||||||||||||| |   || |||||||||||||| ||||| || ||||| || ||||||
Sbjct: 1181 ctgttggactccaatgaccgaacaaaattgtcaccaaccttagtattgattcgggccatc 1122

                                                                        
Query: 470  aaggcgctcggcgaaggtggctccccagcagccctggctttctgataggcccggagtccg 529
            ||||| ||| | || | |||| |||| ||||||||||||| |||||||||||||||||| 
Sbjct: 1121 aaggcactccgtgacgctggcaccccggcagccctggcttcctgataggcccggagtcca 1062

                                                                        
Query: 530  ggttcgattctcttcacgcatccccacatgccctgccgaatgccaatcttcgcaatctca 589
            || || ||| |||| || ||||||||||| || |||| ||| |||| ||| |||||||||
Sbjct: 1061 ggctcaattttctttacacatccccacattccttgcctaataccaagctttgcaatctca 1002

                                               
Query: 590  tttgggatgcccatatcctcatggtggaacaagag 624
            | |||||| ||||| ||||||||||| ||||||||
Sbjct: 1001 tatgggatacccatgtcctcatggtgaaacaagag 967

---

>gb|AY107844.1| Zea mays PCO146552 mRNA sequence
          Length = 823

 Score =  111 bits (56), Expect = 3e-21
 Identities = 146/176 (82%)
 Strand = Plus / Minus

                                                                       
Query: 445 gaccttggtgttgatccgtgccatcaaggcgctcggcgaaggtggctccccagcagccct 504
           |||||||||||||||||| ||||||| ||||||| |||| || ||| |||| || |||| 
Sbjct: 249 gaccttggtgttgatccgggccatcagggcgctccgcgacggcggcgcccccgcggcccg 190

                                                                       
Query: 505 ggctttctgataggcccggagtccgggttcgattctcttcacgcatccccacatgccctg 564
            || | ||| ||||||||||| || || ||||| ||||||||||| |||||||| |||||
Sbjct: 189 cgcctgctggtaggcccggagccccggctcgatcctcttcacgcacccccacatcccctg 130

                                                                   
Query: 565 ccgaatgccaatcttcgcaatctcatttgggatgcccatatcctcatggtggaaca 620
           ||  ||||| | ||| || ||||| |  ||||||||||| ||||| ||||||||||
Sbjct: 129 cctgatgcccagcttggcgatctcgtacgggatgcccatgtcctcgtggtggaaca 74



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 58/65 (89%)
 Strand = Plus / Minus

                                                                       
Query: 245 ttcctctgccccacaaacttccgcgcaacgccaaagatgagagcctttgtcaggagccct 304
           ||||||||||| || ||| ||||||| ||||| |||||||||||||| ||||||||||| 
Sbjct: 494 ttcctctgcccgacgaacctccgcgcgacgccgaagatgagagccttggtcaggagcccc 435

                
Query: 305 tggtc 309
           |||||
Sbjct: 434 tggtc 430

---

>dbj|AK058547.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-C05, full
           insert sequence
          Length = 514

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 55/62 (88%)
 Strand = Plus / Minus

                                                                       
Query: 235 ctacaatgcgttcctctgccccacaaacttccgcgcaacgccaaagatgagagcctttgt 294
           |||||||| |||||||||||| ||||| ||||| ||||| || |||||||||||||| ||
Sbjct: 70  ctacaatgtgttcctctgccctacaaatttccgtgcaacaccgaagatgagagccttggt 11

             
Query: 295 ca 296
           ||
Sbjct: 10  ca 9



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                            
Query: 36  atatatagctggaatcccttttccaaatgtaaa 68
           ||||||||||||||| |||||||||||||||||
Sbjct: 337 atatatagctggaattccttttccaaatgtaaa 305

---

>gb|BT018884.1| Zea mays clone EL01T0205B04.d mRNA sequence
          Length = 1603

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 78/95 (82%)
 Strand = Plus / Minus

                                                                       
Query: 539 ctcttcacgcatccccacatgccctgccgaatgccaatcttcgcaatctcatttgggatg 598
           ||||| ||||| |||||||| |||||||| | ||||| |||||| |||||   ||| | |
Sbjct: 998 ctcttgacgcagccccacatcccctgccggacgccaagcttcgcgatctcccatggaaag 939

                                              
Query: 599 cccatatcctcatggtggaacaagaggatctcgca 633
           ||||| || || |||||||||||||| | ||||||
Sbjct: 938 cccatgtcttcgtggtggaacaagagcacctcgca 904

---

>gb|AC093718.3| Homo sapiens 12 BAC RP11-742C6 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 160904

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 274   gccaaagatgagagcctttgtcaggagc 301
             |||||||| |||||||||||||||||||
Sbjct: 57999 gccaaagaagagagcctttgtcaggagc 58026



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 90    cctccctctctctcatcgactg 111
             ||||||||||||||||||||||
Sbjct: 98505 cctccctctctctcatcgactg 98484

---

>emb|AL050348.21|HSDJ447F3 Human DNA sequence from clone RP3-447F3 on chromosome 20 Contains the
             HNRPA1P3 gene for heterogenous nuclear ribonucleoprotein
             A1 pseudogene 3, the C20orf168 gene for a novel protein
             with Kunitz/Bovine pancreatic trypsin inhibitor domain,
             the WFDC3 gene for WAP four-disulfide core domain 3, the
             C20orf167 gene for a novel protein similar to
             synaptotagmin 1, the UBE2C gene for ubiquitin-conjugating
             enzyme E2 (H10), the TNNC2 gene for fast troponin C2 and
             two CpG islands, complete sequence
          Length = 97385

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 82    ctctgttgcctccctctctctc 103
             ||||||||||||||||||||||
Sbjct: 73600 ctctgttgcctccctctctctc 73621

---

>emb|CR790375.9| Zebrafish DNA sequence from clone CH211-251O16 in linkage group 4,
            complete sequence
          Length = 153499

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 3    atagaagataacatgaaacaaa 24
            ||||||||||||||||||||||
Sbjct: 4217 atagaagataacatgaaacaaa 4238

---

>gb|AC169506.1| Mus musculus BAC clone RP23-417L6 from chromosome 17, complete sequence
          Length = 202033

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 219    aggaagatgtcagatcctaca 239
              |||||||||||||||||||||
Sbjct: 170777 aggaagatgtcagatcctaca 170797

---

>gb|AC149237.1| Pan troglodytes chromosome X clone RP43-049A09 map human ortholog q28,
             complete sequence
          Length = 168371

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 10    ataacatgaaacaaagataaa 30
             |||||||||||||||||||||
Sbjct: 17609 ataacatgaaacaaagataaa 17589

---

>gb|AC006516.10| Homo sapiens X BAC GSHB-557D6 (Genome Systems Human BAC Library)
             complete sequence
          Length = 72265

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 10    ataacatgaaacaaagataaa 30
             |||||||||||||||||||||
Sbjct: 65397 ataacatgaaacaaagataaa 65377

---

>emb|CT033749.8| Mouse DNA sequence from clone RP23-14N10 on chromosome 17, complete
              sequence
          Length = 212052

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 219    aggaagatgtcagatcctaca 239
              |||||||||||||||||||||
Sbjct: 155832 aggaagatgtcagatcctaca 155812

---

>gb|AC102146.2| Ciona savignyi, clone XX-1A8, complete sequence
          Length = 46150

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 11    taacatgaaacaaagataaaaatt 34
             |||||||||||||||||| |||||
Sbjct: 30258 taacatgaaacaaagatataaatt 30235

---

>ref|XM_523213.1| PREDICTED: Pan troglodytes similar to B7 homolog 3 (LOC467818), mRNA
          Length = 2487

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 489  gctccccagcagccctggct 508
            ||||||||||||||||||||
Sbjct: 2147 gctccccagcagccctggct 2166

---

>ref|XM_520353.1| PREDICTED: Pan troglodytes similar to chromosome 9 open reading
           frame 116 (LOC464843), mRNA
          Length = 733

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 321 ccaaggccacggccccgccg 340
           ||||||||||||||||||||
Sbjct: 44  ccaaggccacggccccgccg 63

---

>gb|BC021261.1| Homo sapiens chromosome 9 open reading frame 116, mRNA (cDNA clone
           MGC:29761 IMAGE:4136397), complete cds
          Length = 847

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 321 ccaaggccacggccccgccg 340
           ||||||||||||||||||||
Sbjct: 214 ccaaggccacggccccgccg 233

---

>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome
          Length = 6397126

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 463     tgccatcaaggcgctcggcgaaggtggc 490
               ||||||||||||||| |||| |||||||
Sbjct: 4845954 tgccatcaaggcgctgggcgcaggtggc 4845927

---

>gb|AC102566.9| Mus musculus chromosome 9, clone RP23-223D10, complete sequence
          Length = 253343

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 373   aggtttctcttcggcttcca 392
             ||||||||||||||||||||
Sbjct: 66940 aggtttctcttcggcttcca 66921

---

>emb|BX950203.15| Zebrafish DNA sequence from clone CH211-108P22, complete sequence
          Length = 129504

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 365    tttttcacaggtttctcttc 384
              ||||||||||||||||||||
Sbjct: 105309 tttttcacaggtttctcttc 105328

---

>gb|AE004223.1| Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, section 131
             of 251 of the complete chromosome
          Length = 24353

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 440   tcaccgaccttggtgttgat 459
             ||||||||||||||||||||
Sbjct: 14359 tcaccgaccttggtgttgat 14340

---

>emb|Z74477.1|HSU42H12 Human DNA sequence from clone LL0XNC01-42H12 on chromosome X Contains
             part of the IL1RAPL2 gene for  interleukin 1 receptor
             accessory protein-like 2 and the TEX13A gene for testis
             expressed sequence 13A, complete sequence
          Length = 42749

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 13    acatgaaacaaagataaaaa 32
             ||||||||||||||||||||
Sbjct: 29946 acatgaaacaaagataaaaa 29965

---

>emb|AL513543.14| Human DNA sequence from clone RP11-343J24 on chromosome 1 Contains part
             of the CHRM3 gene for cholinergic receptor muscarinic 3
             and a novel gene (DKFZp667K2218), complete sequence
          Length = 90907

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 83    tctgttgcctccctctctct 102
             ||||||||||||||||||||
Sbjct: 55096 tctgttgcctccctctctct 55077

---

>emb|AL359916.8| Human DNA sequence from clone RP11-550O8 on chromosome 20 Contains
            the RPL7P2 gene for ribosomal protein L7 pseudogene 2,
            the STK35 gene for serine/threonine kinase 35 and a CpG
            island, complete sequence
          Length = 126053

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 86   gttgcctccctctctctcat 105
            ||||||||||||||||||||
Sbjct: 7732 gttgcctccctctctctcat 7751

---

>emb|AL357139.11| Human DNA sequence from clone RP11-793L10 on chromosome 6 Contains a
             pseudogene similar to part of heterogeneous nuclear
             ribonucleoprotein D (37 kD AU-rich element RNA binding
             protein 1) (HNRPD) (P37 AUF1 AUF1A hnRNP D0), complete
             sequence
          Length = 128422

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 19    aacaaagataaaaattcata 38
             ||||||||||||||||||||
Sbjct: 18705 aacaaagataaaaattcata 18686

---

>emb|AL161452.19| Human DNA sequence from clone RP11-426A6 on chromosome 9 Contains the
             OBP2A gene for odorant-binding protein 2A, the LCN1 gene
             for lipocalin 1, the MRPS2 gene for mitochondrial
             ribosomal protein S2, gene MGC29761, a novel gene, gene
             KIAA0649, a novel gene, a novel gene, a suppressor of
             cytokine signaling 5 (SOCS5) pseudogene and two CpG
             islands, complete sequence
          Length = 153231

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 321   ccaaggccacggccccgccg 340
             ||||||||||||||||||||
Sbjct: 59089 ccaaggccacggccccgccg 59108

---

>emb|AL133512.10| Human DNA sequence from clone RP13-131O13 on chromosome Xq21.2-21.33,
             complete sequence
          Length = 165968

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 62    atgtaaattacatcttttta 81
             ||||||||||||||||||||
Sbjct: 79618 atgtaaattacatcttttta 79637

---

>gb|AC093001.2| Homo sapiens 3 BAC RP11-206M11 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 161533

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 53    cttttccaaatgtaaattac 72
             ||||||||||||||||||||
Sbjct: 23511 cttttccaaatgtaaattac 23492

---

>dbj|AB192509.2| Sus scrofa genomic DNA, chromosome 7, BAC clone: L139G16, complete
              sequence
          Length = 157870

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 3      atagaagataacatgaaacaaaga 26
              |||||||||||||||||| |||||
Sbjct: 152190 atagaagataacatgaaaaaaaga 152167

---

>dbj|AK024007.1| Homo sapiens cDNA FLJ13945 fis, clone Y79AA1000969
          Length = 1277

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 321 ccaaggccacggccccgccg 340
           ||||||||||||||||||||
Sbjct: 711 ccaaggccacggccccgccg 730

---

>ref|NM_144654.1| Homo sapiens chromosome 9 open reading frame 116 (C9orf116), mRNA
          Length = 847

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 321 ccaaggccacggccccgccg 340
           ||||||||||||||||||||
Sbjct: 214 ccaaggccacggccccgccg 233

---

>gb|AC068870.17| Homo sapiens chromosome , clone RP11-775C24, complete sequence
          Length = 194237

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 278   aagatgagagcctttgtcaggagccctt 305
             ||||||||||| || |||||||||||||
Sbjct: 17485 aagatgagagctttggtcaggagccctt 17512

---

>gb|AC114318.2| Homo sapiens chromosome 5 clone RP11-425E13, complete sequence
          Length = 163593

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 13     acatgaaacaaagataaaaa 32
              ||||||||||||||||||||
Sbjct: 157195 acatgaaacaaagataaaaa 157176

---

>gb|AC110009.3| Homo sapiens chromosome 5 clone RP11-508M8, complete sequence
          Length = 137632

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 13    acatgaaacaaagataaaaa 32
             ||||||||||||||||||||
Sbjct: 64239 acatgaaacaaagataaaaa 64220

---

>dbj|AP008983.1| Bacteriophage c-st DNA, complete genome
          Length = 185683

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 3      atagaagataacatgaaacaaaga 26
              ||||||||||| ||||||||||||
Sbjct: 176916 atagaagataaaatgaaacaaaga 176893

---

>dbj|AK147343.1| Mus musculus cDNA, RIKEN full-length enriched library,
            clone:M5C1016J08 product:Fas apoptotic inhibitory
            molecule 2, full insert sequence
          Length = 11482

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 493  cccagcagccctggctttct 512
            ||||||||||||||||||||
Sbjct: 2635 cccagcagccctggctttct 2654

---

>ref|XM_693166.1| PREDICTED: Danio rerio similar to hematological and neurological
           expressed 1 (LOC569760), mRNA
          Length = 777

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 365 tttttcacaggtttctcttc 384
           ||||||||||||||||||||
Sbjct: 257 tttttcacaggtttctcttc 238

---

>gb|AC027808.9| Homo sapiens chromosome 15, clone RP11-351M8, complete sequence
          Length = 221936

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 278    aagatgagagcctttgtcaggagccctt 305
              ||||||||||| || |||||||||||||
Sbjct: 212879 aagatgagagctttggtcaggagccctt 212906

---

>gb|AC026795.6| Homo sapiens chromosome 5 clone CTD-2287L22, complete sequence
          Length = 156277

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 69    ttacatctttttactctgtt 88
             ||||||||||||||||||||
Sbjct: 73500 ttacatctttttactctgtt 73519

---

>emb|CR406001.1| Gallus gallus finished cDNA, clone ChEST634k22
          Length = 804

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 51  cccttttccaaatgtaaatt 70
           ||||||||||||||||||||
Sbjct: 353 cccttttccaaatgtaaatt 334

---

>gb|AC008597.8| Homo sapiens chromosome 5 clone CTB-102L23, complete sequence
          Length = 69479

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 69    ttacatctttttactctgtt 88
             ||||||||||||||||||||
Sbjct: 54738 ttacatctttttactctgtt 54757

---

>gb|AC024564.4|AC024564 Homo sapiens chromosome 5 clone CTC-532M5, complete sequence
          Length = 176621

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 69    ttacatctttttactctgtt 88
             ||||||||||||||||||||
Sbjct: 31687 ttacatctttttactctgtt 31668

---

>gb|AC006032.2|AC006032 Homo sapiens BAC clone RP11-115E20 from Y, complete sequence
          Length = 170282

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 62     atgtaaattacatcttttta 81
              ||||||||||||||||||||
Sbjct: 131036 atgtaaattacatcttttta 131055

---

>gb|AC022188.13| Homo sapiens chromosome 15, clone RP11-8P11, complete sequence
          Length = 140176

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 489   gctccccagcagccctggct 508
             ||||||||||||||||||||
Sbjct: 37552 gctccccagcagccctggct 37571

---

>gb|AC138612.1| Homo sapiens BAC clone CTD-2293E22 from 2, complete sequence
          Length = 158057

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 69    ttacatctttttactctgtt 88
             ||||||||||||||||||||
Sbjct: 80734 ttacatctttttactctgtt 80753

---

>gb|AY927868.1| Homo sapiens pierce 1 mRNA, complete cds
          Length = 411

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 321 ccaaggccacggccccgccg 340
           ||||||||||||||||||||
Sbjct: 44  ccaaggccacggccccgccg 63

---

>gb|AC117831.6| Mus musculus chromosome 15, clone RP24-106E17, complete sequence
          Length = 173772

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 493    cccagcagccctggctttct 512
              ||||||||||||||||||||
Sbjct: 118431 cccagcagccctggctttct 118412

---

>gb|AF119150.1|AF119150 Vibrio cholerae Rtx toxin gene cluster, complete cds
          Length = 18605

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 440   tcaccgaccttggtgttgat 459
             ||||||||||||||||||||
Sbjct: 9999  tcaccgaccttggtgttgat 10018

---

>dbj|AP001746.1| Homo sapiens genomic DNA, chromosome 21q, section 90/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 408    cactgttggactccagtcct 427
              ||||||||||||||||||||
Sbjct: 286854 cactgttggactccagtcct 286873

---

>gb|DQ314867.1| Homo sapiens ceruloplasmin (ferroxidase) (CP) gene, complete cds
          Length = 52139

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 53    cttttccaaatgtaaattac 72
             ||||||||||||||||||||
Sbjct: 21775 cttttccaaatgtaaattac 21794

---

>emb|CR450834.5| Zebrafish DNA sequence from clone CH211-237B9 in linkage group 11,
             complete sequence
          Length = 137302

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 14    catgaaacaaagataaaaat 33
             ||||||||||||||||||||
Sbjct: 58418 catgaaacaaagataaaaat 58437

---

>emb|AL731822.31| Mouse DNA sequence from clone RP23-105H6 on chromosome 2, complete
             sequence
          Length = 218037

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 558   tgccctgccgaatgccaatc 577
             ||||||||||||||||||||
Sbjct: 84412 tgccctgccgaatgccaatc 84393

---

>dbj|AP001624.1| Homo sapiens genomic DNA, chromosome 21, clone:KB994G8, MX1-D21S171
             region, complete sequence
          Length = 108500

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 408   cactgttggactccagtcct 427
             ||||||||||||||||||||
Sbjct: 53821 cactgttggactccagtcct 53840


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,777,745
Number of Sequences: 3902068
Number of extensions: 5777745
Number of successful extensions: 132708
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 132499
Number of HSP's gapped (non-prelim): 200
length of query: 638
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 615
effective length of database: 17,143,297,704
effective search space: 10543128087960
effective search space used: 10543128087960
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---