>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,|
           chloroplast precursor (RuBisCO activase A) (RA A)
          Length = 464

 Score =  249 bits (635), Expect(2) = 4e-85
 Identities = 123/123 (100%), Positives = 123/123 (100%)
 Frame = -3

Query: 673 VCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLV 494
           VCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLV
Sbjct: 305 VCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLV 364

Query: 493 NSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGS 314
           NSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGS
Sbjct: 365 NSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGS 424

Query: 313 FYG 305
           FYG
Sbjct: 425 FYG 427



 Score = 86.3 bits (212), Expect(2) = 4e-85
 Identities = 38/38 (100%), Positives = 38/38 (100%)
 Frame = -2

Query: 257 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 144
           GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF
Sbjct: 427 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 464

>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
           (RubisCO activase alpha form)
          Length = 476

 Score =  202 bits (514), Expect(2) = 3e-65
 Identities = 94/123 (76%), Positives = 111/123 (90%)
 Frame = -3

Query: 673 VCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLV 494
           VCKGIF+TDNV+D+ +VK+VDTFPGQSIDFFGALRARVY DEVRKWV   G++ IGK+LV
Sbjct: 315 VCKGIFRTDNVADDDIVKLVDTFPGQSIDFFGALRARVYHDEVRKWVSEVGVDTIGKKLV 374

Query: 493 NSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGS 314
           NS++GP +FEQPKMT++KLL YG MLVQEQ+NVKRVQLAD YMS+AALGDAN DA+K G+
Sbjct: 375 NSKEGPPSFEQPKMTIDKLLGYGGMLVQEQENVKRVQLADKYMSEAALGDANNDAIKRGT 434

Query: 313 FYG 305
           FYG
Sbjct: 435 FYG 437



 Score = 66.6 bits (161), Expect(2) = 3e-65
 Identities = 30/40 (75%), Positives = 33/40 (82%), Gaps = 1/40 (2%)
 Frame = -2

Query: 260 GGKGAQQ-GTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 144
           GG+ AQQ G +PVPEGCTD  A NYDPTARSDDGSC+Y F
Sbjct: 437 GGQAAQQVGNVPVPEGCTDPQATNYDPTARSDDGSCVYKF 476

>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 474

 Score =  195 bits (495), Expect(2) = 2e-63
 Identities = 93/123 (75%), Positives = 108/123 (87%)
 Frame = -3

Query: 673 VCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLV 494
           VCKGIF+TD + DE +V +VD FPGQSIDFFGALRARVYDDEVRK+V S G+E IGKRLV
Sbjct: 315 VCKGIFRTDKIKDEDIVTLVDQFPGQSIDFFGALRARVYDDEVRKFVESLGVEKIGKRLV 374

Query: 493 NSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGS 314
           NSR+GP  FEQP+MT EKL+EYG+MLV EQ+NVKRVQLA+TY+SQAALGDAN DA+  G+
Sbjct: 375 NSREGPPVFEQPEMTYEKLMEYGNMLVMEQENVKRVQLAETYLSQAALGDANADAIGRGT 434

Query: 313 FYG 305
           FYG
Sbjct: 435 FYG 437



 Score = 67.8 bits (164), Expect(2) = 2e-63
 Identities = 29/38 (76%), Positives = 33/38 (86%)
 Frame = -2

Query: 257 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 144
           GKGAQQ  LPVPEGCTD  A+N+DPTARSDDG+C+Y F
Sbjct: 437 GKGAQQVNLPVPEGCTDPVAENFDPTARSDDGTCVYNF 474

>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 472

 Score =  194 bits (493), Expect(2) = 5e-62
 Identities = 91/123 (73%), Positives = 108/123 (87%)
 Frame = -3

Query: 673 VCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLV 494
           VC GIF+TD V  E VVK+VD FPGQSIDFFGALRARVY DEVRKWV S G++N+GK+LV
Sbjct: 313 VCTGIFKTDKVPAEHVVKLVDAFPGQSIDFFGALRARVYHDEVRKWVNSVGVDNVGKKLV 372

Query: 493 NSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGS 314
           NS+DGP  FEQP+MT++KL+EYG+MLVQEQ+NVKRVQLAD YMS AALGDAN+DA+  G+
Sbjct: 373 NSKDGPPVFEQPEMTLQKLMEYGNMLVQEQENVKRVQLADQYMSSAALGDANKDAIDRGT 432

Query: 313 FYG 305
           F+G
Sbjct: 433 FFG 435



 Score = 63.9 bits (154), Expect(2) = 5e-62
 Identities = 28/36 (77%), Positives = 30/36 (83%)
 Frame = -2

Query: 257 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLY 150
           GK AQQ +LPV +GCTD  AKNYDPTARSDDGSC Y
Sbjct: 435 GKAAQQVSLPVAQGCTDPEAKNYDPTARSDDGSCTY 470

>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,|
           chloroplast precursor (RuBisCO activase B) (RA B)
          Length = 425

 Score =  218 bits (555), Expect = 1e-56
 Identities = 102/123 (82%), Positives = 115/123 (93%)
 Frame = -3

Query: 673 VCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLV 494
           VCKGIF+TDNV DE+VV++VDTFPGQSIDFFGALRARVYDDEVRKWVG  G+ENI KRLV
Sbjct: 302 VCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWVGEIGVENISKRLV 361

Query: 493 NSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGS 314
           NSR+GP TF+QPKMT+EKL+EYGHMLVQEQ+NVKRVQLAD Y+S+AALG AN DAMKTG+
Sbjct: 362 NSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSEAALGQANDDAMKTGA 421

Query: 313 FYG 305
           FYG
Sbjct: 422 FYG 424

>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 432

 Score =  217 bits (552), Expect = 3e-56
 Identities = 102/123 (82%), Positives = 115/123 (93%)
 Frame = -3

Query: 673 VCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLV 494
           VCKGIF+TDNV DE +VKIVD+FPGQSIDFFGALRARVYDDEVRKWV  TG+ENIGKRLV
Sbjct: 305 VCKGIFRTDNVPDEDIVKIVDSFPGQSIDFFGALRARVYDDEVRKWVSDTGVENIGKRLV 364

Query: 493 NSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGS 314
           NSR+GP  FEQPKMT+EKL+EYG+MLV+EQ+NVKRVQLA+ Y+S+AALGDAN DAMKTGS
Sbjct: 365 NSREGPPEFEQPKMTIEKLIEYGYMLVKEQENVKRVQLAEQYLSEAALGDANSDAMKTGS 424

Query: 313 FYG 305
           FYG
Sbjct: 425 FYG 427

>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 437

 Score =  205 bits (522), Expect = 9e-53
 Identities = 95/123 (77%), Positives = 113/123 (91%)
 Frame = -3

Query: 673 VCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLV 494
           VC GIF++DNV+ E +VK+VDTFPGQSIDFFGALRARVYDDEVRKW+   G+++IGK+LV
Sbjct: 315 VCIGIFRSDNVAKEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWITGVGVDSIGKKLV 374

Query: 493 NSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGS 314
           NS++GP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLAD Y+S+AALGDAN DAM TG+
Sbjct: 375 NSKEGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLSEAALGDANSDAMNTGT 434

Query: 313 FYG 305
           FYG
Sbjct: 435 FYG 437

>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 433

 Score =  204 bits (520), Expect = 2e-52
 Identities = 94/122 (77%), Positives = 113/122 (92%)
 Frame = -3

Query: 673 VCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLV 494
           VCKGIF+TD V +E VV++VDTFPGQSIDFFGALRARVYDDEVR+WV  TG+ENI ++LV
Sbjct: 311 VCKGIFRTDGVDEEHVVQLVDTFPGQSIDFFGALRARVYDDEVRRWVSETGVENIARKLV 370

Query: 493 NSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGS 314
           NS++GP TFEQPK+T+EKLLEYGHMLV EQ+NVKRVQLAD Y+++AALG+AN+DAMKTGS
Sbjct: 371 NSKEGPPTFEQPKITIEKLLEYGHMLVAEQENVKRVQLADKYLNEAALGEANEDAMKTGS 430

Query: 313 FY 308
           F+
Sbjct: 431 FF 432

>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
          Length = 439

 Score =  204 bits (518), Expect = 3e-52
 Identities = 98/121 (80%), Positives = 111/121 (91%)
 Frame = -3

Query: 673 VCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLV 494
           VCKGIF+TDNV +E+V+KIVDTFPGQSIDFFGALRARVYDDEVRKWV  TGIE IG +L+
Sbjct: 319 VCKGIFRTDNVPEEAVIKIVDTFPGQSIDFFGALRARVYDDEVRKWVSGTGIEAIGDKLL 378

Query: 493 NSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGS 314
           NS DGP TFEQPKMTVEKLLEYG+MLVQEQ+NVKRVQLA+TY+ +AALGDAN DA+ TG+
Sbjct: 379 NSFDGPPTFEQPKMTVEKLLEYGNMLVQEQENVKRVQLAETYLKEAALGDANADAINTGN 438

Query: 313 F 311
           F
Sbjct: 439 F 439

>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 459

 Score =  202 bits (514), Expect = 8e-52
 Identities = 97/119 (81%), Positives = 111/119 (93%)
 Frame = -3

Query: 673 VCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLV 494
           VCKGIF+TDNV +E+VVKIVD+FPGQSIDFFGALRARVYDDEVRKWV  TGIE IG++L+
Sbjct: 314 VCKGIFRTDNVPEEAVVKIVDSFPGQSIDFFGALRARVYDDEVRKWVSGTGIELIGEKLL 373

Query: 493 NSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTG 317
           NSRDGP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLA+TY+ +AALGDAN DA+ TG
Sbjct: 374 NSRDGPPTFEQPKMTLEKLLEYGNMLVQEQENVKRVQLAETYLKEAALGDANADAINTG 432

>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
           (RubisCO activase beta form)
          Length = 435

 Score =  202 bits (513), Expect = 1e-51
 Identities = 93/121 (76%), Positives = 111/121 (91%)
 Frame = -3

Query: 673 VCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLV 494
           VCKGIF+TDNV +E +VK+VD FPGQSIDFFGALRARVYDDEVRKWV   G++ IGK+LV
Sbjct: 315 VCKGIFRTDNVPEEDIVKVVDQFPGQSIDFFGALRARVYDDEVRKWVSEVGVDTIGKKLV 374

Query: 493 NSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGS 314
           NS++GP TFEQPKMT++KLL+YG+MLV+EQ+NVKRVQLAD YMS+AALGDANQDA+K G+
Sbjct: 375 NSKEGPPTFEQPKMTIDKLLQYGNMLVEEQENVKRVQLADKYMSEAALGDANQDAIKRGT 434

Query: 313 F 311
           F
Sbjct: 435 F 435

>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
          Length = 442

 Score =  198 bits (503), Expect = 1e-50
 Identities = 96/122 (78%), Positives = 106/122 (86%)
 Frame = -3

Query: 673 VCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLV 494
           VC GIF+TDNV  E VVKIVD FPGQSIDFFGALRARVYDDEVRKWV  TGIE IG +L+
Sbjct: 319 VCTGIFRTDNVPAEDVVKIVDNFPGQSIDFFGALRARVYDDEVRKWVSGTGIEKIGDKLL 378

Query: 493 NSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGS 314
           NS DGP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLAD Y+ +AALGDAN DA+  GS
Sbjct: 379 NSFDGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLKEAALGDANADAINNGS 438

Query: 313 FY 308
           F+
Sbjct: 439 FF 440

>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 439

 Score =  192 bits (488), Expect = 8e-49
 Identities = 86/122 (70%), Positives = 111/122 (90%)
 Frame = -3

Query: 673 VCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLV 494
           VCKGIF+TD V +E + K+VDTFPGQSIDFFGALRARVYDDEVRKW+   G++  GK+LV
Sbjct: 317 VCKGIFRTDGVPEEDITKLVDTFPGQSIDFFGALRARVYDDEVRKWISGVGVDATGKKLV 376

Query: 493 NSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGS 314
           NS++GP TF+QPKM+++KLL+YG+MLVQEQ+NVKRVQLAD Y+++AALG+AN+DA+K+GS
Sbjct: 377 NSKEGPPTFDQPKMSLDKLLQYGNMLVQEQENVKRVQLADKYLNEAALGNANEDAIKSGS 436

Query: 313 FY 308
           F+
Sbjct: 437 FF 438

>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 441

 Score =  185 bits (469), Expect = 1e-46
 Identities = 83/122 (68%), Positives = 109/122 (89%)
 Frame = -3

Query: 673 VCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLV 494
           VCKGIF+TD V ++ +V++VD  PGQSIDFFGALRARVYDDEVRKW+   G++++GK+LV
Sbjct: 319 VCKGIFRTDGVPEKDIVELVDKHPGQSIDFFGALRARVYDDEVRKWISGVGVDSVGKKLV 378

Query: 493 NSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGS 314
           NS++GP TF+QPKMT++KLL Y  MLVQEQ+NVKRVQLAD Y+++AALG+AN+DA+K+GS
Sbjct: 379 NSKEGPPTFDQPKMTLDKLLLYASMLVQEQENVKRVQLADQYLNEAALGNANEDAIKSGS 438

Query: 313 FY 308
           F+
Sbjct: 439 FF 440

>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 413

 Score =  154 bits (388), Expect = 3e-37
 Identities = 71/98 (72%), Positives = 84/98 (85%)
 Frame = -3

Query: 673 VCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLV 494
           +C GIF+TD V  E +VK+VDTFPGQSIDFFGALRARVYDDEVRKW    G+E IG+ LV
Sbjct: 312 ICTGIFRTDGVPFEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWAVGVGVERIGRNLV 371

Query: 493 NSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQL 380
           NS++ P TF+QPKMT+EKLLEYG+MLV EQ+NVKRV+L
Sbjct: 372 NSKESPPTFDQPKMTIEKLLEYGNMLVMEQENVKRVKL 409

>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 408

 Score =  129 bits (325), Expect = 6e-30
 Identities = 65/108 (60%), Positives = 79/108 (73%)
 Frame = -3

Query: 673 VCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLV 494
           VC GIFQ DNV    V  +VDTFPGQSIDFFGALRARVYDD VR+W+  TG++ IG++LV
Sbjct: 288 VCMGIFQEDNVQRREVENLVDTFPGQSIDFFGALRARVYDDMVRQWITDTGVDKIGQQLV 347

Query: 493 NSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAAL 350
           N+R   V   +  M +  L++YG  LV EQ+NVKRVQLAD Y+S A L
Sbjct: 348 NARQ-KVAMPKVSMDLNVLIKYGKSLVDEQENVKRVQLADAYLSGAEL 394

>RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 415

 Score =  100 bits (250), Expect = 3e-21
 Identities = 45/99 (45%), Positives = 66/99 (66%)
 Frame = -3

Query: 664 GIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSR 485
           GIF  D +S   V K+VD+FP QSIDFF ALR+R+YD+++R ++   G EN+  R+VNS 
Sbjct: 191 GIFAEDGLSQRDVEKLVDSFPNQSIDFFSALRSRIYDEQIRDFIHQVGYENVSLRVVNSL 250

Query: 484 DGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTY 368
           +GP  F++P  T+  L+E  + +V EQ  ++  QL D Y
Sbjct: 251 EGPPAFKKPDFTLSHLIESANFMVAEQKRIETSQLVDEY 289

>RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 414

 Score = 93.2 bits (230), Expect = 6e-19
 Identities = 43/99 (43%), Positives = 64/99 (64%)
 Frame = -3

Query: 664 GIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSR 485
           GIF  D +S   + ++VDTFP QSIDFF ALR+R+YD ++R ++   G E I  R+VNS 
Sbjct: 191 GIFAEDGLSQREIEQLVDTFPKQSIDFFSALRSRIYDIQIRDFIHKVGFERISLRVVNSL 250

Query: 484 DGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTY 368
           + P  F++P  ++  L+E G++++ EQ  V   QL D Y
Sbjct: 251 EAPPEFKKPDFSLAHLIESGNLVLGEQQRVDNSQLVDEY 289

>RCA_POPEU (P84562) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast (RuBisCO activase) (RA) (Fragments)
          Length = 32

 Score = 47.0 bits (110), Expect = 5e-05
 Identities = 27/60 (45%), Positives = 30/60 (50%)
 Frame = -3

Query: 619 IVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEK 440
           +VDTFPGQSIDFFGAL                            R+GP TFEQP MT+EK
Sbjct: 1   LVDTFPGQSIDFFGAL----------------------------REGPPTFEQPAMTIEK 32

>EF1A2_XENLA (P17507) Elongation factor 1-alpha, oocyte form (EF-1-alpha-O)|
           (EF-1AO) (42S p48)
          Length = 461

 Score = 31.6 bits (70), Expect = 2.3
 Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 8/78 (10%)
 Frame = -3

Query: 475 VTFEQPKMTVE-KLLEYGHMLVQEQ-------DNVKRVQLADTYMSQAALGDANQDAMKT 320
           VTF    +T E K +E  H  +QE         NVK + + D      A    N   M+ 
Sbjct: 278 VTFAPSNVTTEVKSVEMHHEALQEALPGDNVGFNVKNISVKDIRRGNVAGDSKNDPPMQA 337

Query: 319 GSFYG*KILHTHPPSLAA 266
           GSF    I+  HP  ++A
Sbjct: 338 GSFTAQVIILNHPGQISA 355

>YNEI_ECOLI (P76149) Aldehyde dehydrogenase-like protein yneI (EC 1.2.1.-)|
          Length = 462

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = +2

Query: 536 PLAHLIVVHPSTQSTEKVNGLSWEGVDDLDDRLVTDIVGLED 661
           P  H I ++P+T   E+++ L W G DD+++ L     G  D
Sbjct: 5   PATHAISINPATG--EQLSVLPWAGADDIENALQLAAAGFRD 44

>LEPA_HELPY (O25122) GTP-binding protein lepA|
          Length = 602

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 20/79 (25%), Positives = 37/79 (46%)
 Frame = -3

Query: 622 KIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVE 443
           KI+ T P  S DF   L+A +YD     ++G+         LV   DG +  EQ  + + 
Sbjct: 180 KIITTIPAPSGDFNAPLKALIYDSWFDNYLGALA-------LVRIMDGSINTEQEILVMG 232

Query: 442 KLLEYGHMLVQEQDNVKRV 386
              ++G + +   + +K++
Sbjct: 233 TGKKHGVLGLYYPNPLKKI 251

>GP116_HUMAN (Q8IZF2) Probable G-protein coupled receptor 116 precursor|
          Length = 1346

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +3

Query: 372 VSASCTRLTLSCSWTSMCPYSSSFSTVIFGCSKVT 476
           + +SC+R TL    T  CP  SS +TVI+ C  ++
Sbjct: 420 IDSSCSRYTLKADGTQ-CPSGSSGTTVIYTCEFIS 453

>EF1A_ONCVO (P27592) Elongation factor 1-alpha (EF-1-alpha)|
          Length = 464

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 8/78 (10%)
 Frame = -3

Query: 475 VTFEQPKMTVE-KLLEYGHMLVQEQ-------DNVKRVQLADTYMSQAALGDANQDAMKT 320
           VTF    +T E K +E  H  +QE         NVK + + D      A    N  A +T
Sbjct: 278 VTFAPQNLTTEVKSVEMHHEALQEALPGDNVGFNVKNISIKDIRRGSVASDSKNDPAKET 337

Query: 319 GSFYG*KILHTHPPSLAA 266
             F    I+  HP  ++A
Sbjct: 338 KMFTAQVIIMNHPGQISA 355

>LRC24_MOUSE (Q8BHA1) Leucine-rich repeat-containing protein 24 precursor|
          Length = 521

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 16/37 (43%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
 Frame = -3

Query: 538 WVGSTGIENIGKRLVNSRDGPVT-FEQPKMTVEKLLE 431
           W+GS  I+  G+RL++SRD  +T  E P++ ++ LLE
Sbjct: 222 WLGSW-IKEGGRRLLSSRDKKITCAEPPRLALQSLLE 257


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,679,387
Number of Sequences: 219361
Number of extensions: 1921023
Number of successful extensions: 5712
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 5529
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5709
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6598423128
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)