| Clone Name | rbaal5a12 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK071341.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023090B22, full insert sequence Length = 1079 Score = 307 bits (155), Expect = 3e-80 Identities = 307/358 (85%), Gaps = 6/358 (1%) Strand = Plus / Minus Query: 311 ctcacacctttgtgccatcggcatcagcagcataaacctggccatattcgcccttgtcat 370 |||| |||||||||||||| |||||| |||| ||||||||||||| ||||||||||||| Sbjct: 744 ctcagacctttgtgccatcaacatcagaagcaaaaacctggccataatcgcccttgtcat 685 Query: 371 cctcatcctcatccagatagtcagcccttgcattgagggccagcatctggcaaacaagcc 430 |||||||| |||||||||| |||||||||||| || ||||||||||||||||||| Sbjct: 684 cctcatcc------agatagtcagaccttgcattgagagctagcatctggcaaacaagcc 631 Query: 431 agaacagagcagcatcaagggccaggaaagcggcgcctccgaagaggccggtctttgcag 490 |||| ||||||||||||||||||||||||||||| ||||| |||||||| ||||| |||| Sbjct: 630 agaagagagcagcatcaagggccaggaaagcggctcctccaaagaggccagtcttcgcag 571 Query: 491 tggggcacagggtatccatgtcatggtgaacgttactggtgcgatggtggccctccgtga 550 | |||||| ||||||||| ||||||||| | ||| || | || || | ||||| |||| Sbjct: 570 tagggcactgggtatccaggtcatggtggatgttgttgcttcggtgaagaccctcggtga 511 Query: 551 tcgttgcccagagcagcattgcaaaagccagagctgacaccagctcagcaataacaaaga 610 |||||||||||||| ||||||||| ||||||||||| || |||||||||||||| |||| Sbjct: 510 ccgttgcccagagcaacattgcaaacgccagagctgagacaagctcagcaataacgaaga 451 Query: 611 agacggacaagctggtgctctgaaataacgctccacgaggaaccgacttgcccttgta 668 | | || ||||||| ||| ||||||| ||||| |||||||| ||||||| |||||| Sbjct: 450 acgcagataagctggcgcttcgaaataatgctccgcgaggaacagacttgctcttgta 393
>dbj|AK058867.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-006-A10, full insert sequence Length = 1017 Score = 307 bits (155), Expect = 3e-80 Identities = 307/358 (85%), Gaps = 6/358 (1%) Strand = Plus / Minus Query: 311 ctcacacctttgtgccatcggcatcagcagcataaacctggccatattcgcccttgtcat 370 |||| |||||||||||||| |||||| |||| ||||||||||||| ||||||||||||| Sbjct: 658 ctcagacctttgtgccatcaacatcagaagcaaaaacctggccataatcgcccttgtcat 599 Query: 371 cctcatcctcatccagatagtcagcccttgcattgagggccagcatctggcaaacaagcc 430 |||||||| |||||||||| |||||||||||| || ||||||||||||||||||| Sbjct: 598 cctcatcc------agatagtcagaccttgcattgagagctagcatctggcaaacaagcc 545 Query: 431 agaacagagcagcatcaagggccaggaaagcggcgcctccgaagaggccggtctttgcag 490 |||| ||||||||||||||||||||||||||||| ||||| |||||||| ||||| |||| Sbjct: 544 agaagagagcagcatcaagggccaggaaagcggctcctccaaagaggccagtcttcgcag 485 Query: 491 tggggcacagggtatccatgtcatggtgaacgttactggtgcgatggtggccctccgtga 550 | |||||| ||||||||| ||||||||| | ||| || | || || | ||||| |||| Sbjct: 484 tagggcactgggtatccaggtcatggtggatgttgttgcttcggtgaagaccctcggtga 425 Query: 551 tcgttgcccagagcagcattgcaaaagccagagctgacaccagctcagcaataacaaaga 610 |||||||||||||| ||||||||| ||||||||||| || |||||||||||||| |||| Sbjct: 424 ccgttgcccagagcaacattgcaaacgccagagctgagacaagctcagcaataacgaaga 365 Query: 611 agacggacaagctggtgctctgaaataacgctccacgaggaaccgacttgcccttgta 668 | | || ||||||| ||| ||||||| ||||| |||||||| ||||||| |||||| Sbjct: 364 acgcagataagctggcgcttcgaaataatgctccgcgaggaacagacttgctcttgta 307
>ref|XM_493913.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1005 Score = 301 bits (152), Expect = 2e-78 Identities = 301/351 (85%), Gaps = 6/351 (1%) Strand = Plus / Minus Query: 318 ctttgtgccatcggcatcagcagcataaacctggccatattcgcccttgtcatcctcatc 377 |||||||||||| |||||| |||| ||||||||||||| |||||||||||||||||||| Sbjct: 579 ctttgtgccatcaacatcagaagcaaaaacctggccataatcgcccttgtcatcctcatc 520 Query: 378 ctcatccagatagtcagcccttgcattgagggccagcatctggcaaacaagccagaacag 437 | |||||||||| |||||||||||| || ||||||||||||||||||||||| || Sbjct: 519 c------agatagtcagaccttgcattgagagctagcatctggcaaacaagccagaagag 466 Query: 438 agcagcatcaagggccaggaaagcggcgcctccgaagaggccggtctttgcagtggggca 497 ||||||||||||||||||||||||||| ||||| |||||||| ||||| ||||| ||||| Sbjct: 465 agcagcatcaagggccaggaaagcggctcctccaaagaggccagtcttcgcagtagggca 406 Query: 498 cagggtatccatgtcatggtgaacgttactggtgcgatggtggccctccgtgatcgttgc 557 | ||||||||| ||||||||| | ||| || | || || | ||||| |||| |||||| Sbjct: 405 ctgggtatccaggtcatggtggatgttgttgcttcggtgaagaccctcggtgaccgttgc 346 Query: 558 ccagagcagcattgcaaaagccagagctgacaccagctcagcaataacaaagaagacgga 617 |||||||| ||||||||| ||||||||||| || |||||||||||||| ||||| | || Sbjct: 345 ccagagcaacattgcaaacgccagagctgagacaagctcagcaataacgaagaacgcaga 286 Query: 618 caagctggtgctctgaaataacgctccacgaggaaccgacttgcccttgta 668 ||||||| ||| ||||||| ||||| |||||||| ||||||| |||||| Sbjct: 285 taagctggcgcttcgaaataatgctccgcgaggaacagacttgctcttgta 235
>gb|AC093088.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1001_G01, complete sequence Length = 122768 Score = 258 bits (130), Expect = 2e-65 Identities = 240/277 (86%), Gaps = 6/277 (2%) Strand = Plus / Minus Query: 311 ctcacacctttgtgccatcggcatcagcagcataaacctggccatattcgcccttgtcat 370 |||| |||||||||||||| |||||| |||| ||||||||||||| ||||||||||||| Sbjct: 12915 ctcagacctttgtgccatcaacatcagaagcaaaaacctggccataatcgcccttgtcat 12856 Query: 371 cctcatcctcatccagatagtcagcccttgcattgagggccagcatctggcaaacaagcc 430 |||||||| |||||||||| |||||||||||| || ||||||||||||||||||| Sbjct: 12855 cctcatcc------agatagtcagaccttgcattgagagctagcatctggcaaacaagcc 12802 Query: 431 agaacagagcagcatcaagggccaggaaagcggcgcctccgaagaggccggtctttgcag 490 |||| ||||||||||||||||||||||||||||| ||||| |||||||| ||||| |||| Sbjct: 12801 agaagagagcagcatcaagggccaggaaagcggctcctccaaagaggccagtcttcgcag 12742 Query: 491 tggggcacagggtatccatgtcatggtgaacgttactggtgcgatggtggccctccgtga 550 | |||||| ||||||||| ||||||||| | ||| || | || || | ||||| |||| Sbjct: 12741 tagggcactgggtatccaggtcatggtggatgttgttgcttcggtgaagaccctcggtga 12682 Query: 551 tcgttgcccagagcagcattgcaaaagccagagctga 587 |||||||||||||| ||||||||| ||||||||||| Sbjct: 12681 ccgttgcccagagcaacattgcaaacgccagagctga 12645 Score = 54.0 bits (27), Expect = 6e-04 Identities = 63/75 (84%) Strand = Plus / Minus Query: 594 ctcagcaataacaaagaagacggacaagctggtgctctgaaataacgctccacgaggaac 653 |||||||||||| ||||| | || ||||||| ||| ||||||| ||||| |||||||| Sbjct: 12243 ctcagcaataacgaagaacgcagataagctggcgcttcgaaataatgctccgcgaggaac 12184 Query: 654 cgacttgcccttgta 668 ||||||| |||||| Sbjct: 12183 agacttgctcttgta 12169
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 258 bits (130), Expect = 2e-65 Identities = 240/277 (86%), Gaps = 6/277 (2%) Strand = Plus / Minus Query: 311 ctcacacctttgtgccatcggcatcagcagcataaacctggccatattcgcccttgtcat 370 |||| |||||||||||||| |||||| |||| ||||||||||||| ||||||||||||| Sbjct: 1057304 ctcagacctttgtgccatcaacatcagaagcaaaaacctggccataatcgcccttgtcat 1057245 Query: 371 cctcatcctcatccagatagtcagcccttgcattgagggccagcatctggcaaacaagcc 430 |||||||| |||||||||| |||||||||||| || ||||||||||||||||||| Sbjct: 1057244 cctcatcc------agatagtcagaccttgcattgagagctagcatctggcaaacaagcc 1057191 Query: 431 agaacagagcagcatcaagggccaggaaagcggcgcctccgaagaggccggtctttgcag 490 |||| ||||||||||||||||||||||||||||| ||||| |||||||| ||||| |||| Sbjct: 1057190 agaagagagcagcatcaagggccaggaaagcggctcctccaaagaggccagtcttcgcag 1057131 Query: 491 tggggcacagggtatccatgtcatggtgaacgttactggtgcgatggtggccctccgtga 550 | |||||| ||||||||| ||||||||| | ||| || | || || | ||||| |||| Sbjct: 1057130 tagggcactgggtatccaggtcatggtggatgttgttgcttcggtgaagaccctcggtga 1057071 Query: 551 tcgttgcccagagcagcattgcaaaagccagagctga 587 |||||||||||||| ||||||||| ||||||||||| Sbjct: 1057070 ccgttgcccagagcaacattgcaaacgccagagctga 1057034 Score = 54.0 bits (27), Expect = 6e-04 Identities = 63/75 (84%) Strand = Plus / Minus Query: 594 ctcagcaataacaaagaagacggacaagctggtgctctgaaataacgctccacgaggaac 653 |||||||||||| ||||| | || ||||||| ||| ||||||| ||||| |||||||| Sbjct: 1056632 ctcagcaataacgaagaacgcagataagctggcgcttcgaaataatgctccgcgaggaac 1056573 Query: 654 cgacttgcccttgta 668 ||||||| |||||| Sbjct: 1056572 agacttgctcttgta 1056558 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 110 tctaaaatatactccctccgttc 132 ||||||||||||||||||||||| Sbjct: 23271952 tctaaaatatactccctccgttc 23271974 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 111 ctaaaatatactccctccgtt 131 ||||||||||||||||||||| Sbjct: 27201604 ctaaaatatactccctccgtt 27201584 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 ctaaaatatactccctccgt 130 |||||||||||||||||||| Sbjct: 23389117 ctaaaatatactccctccgt 23389136 Score = 40.1 bits (20), Expect = 9.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 116 atatactccctccgttcactattataag 143 ||||||||||||||||| ||||||||| Sbjct: 20558152 atatactccctccgttccatattataag 20558179 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 taaaatatactccctccgtt 131 |||||||||||||||||||| Sbjct: 1508161 taaaatatactccctccgtt 1508180
>gb|AY105350.1| Zea mays PCO123225 mRNA sequence Length = 1042 Score = 258 bits (130), Expect = 2e-65 Identities = 279/328 (85%), Gaps = 3/328 (0%) Strand = Plus / Minus Query: 336 agcagcataaacctggccatattcgcccttgtcatcctcatcctcatccagatagtcagc 395 ||||||||||| |||||||||||| |||||| | |||||||| || || |||||||| Sbjct: 735 agcagcataaatctggccatattctcccttg---ccgtcatcctcgtcaaggtagtcagc 679 Query: 396 ccttgcattgagggccagcatctggcaaacaagccagaacagagcagcatcaagggccag 455 ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| || Sbjct: 678 ccttgcattgagggccagcatctggcaaacaagccagaagagagcagcgtcaagggcgag 619 Query: 456 gaaagcggcgcctccgaagaggccggtctttgcagtggggcacagggtatccatgtcatg 515 |||||||||||| ||||| ||||||||||| ||||| |||||| || |||||||| || Sbjct: 618 gaaagcggcgccgccgaacaggccggtcttggcagtagggcactggtagtccatgtcgtg 559 Query: 516 gtgaacgttactggtgcgatggtggccctccgtgatcgttgcccagagcagcattgcaaa 575 ||| | ||| || |||| || | ||||| |||| |||||||| ||| |||||||| Sbjct: 558 gtggatgttcttgctgcggtgaagaccctcggtgacagttgcccacagcgacattgcaag 499 Query: 576 agccagagctgacaccagctcagcaataacaaagaagacggacaagctggtgctctgaaa 635 |||||| ||||| || |||||||||| ||||||||| || | |||||||||||| ||||| Sbjct: 498 agccagggctgagacaagctcagcaacaacaaagaacactgtcaagctggtgctttgaaa 439 Query: 636 taacgctccacgaggaaccgacttgccc 663 | ||||||||||||||| ||||||||| Sbjct: 438 cagcgctccacgaggaactgacttgccc 411
>dbj|AP001111.1| Oryza sativa genomic DNA, chromosome 5, clone:P0699E04 Length = 175439 Score = 258 bits (130), Expect = 2e-65 Identities = 240/277 (86%), Gaps = 6/277 (2%) Strand = Plus / Minus Query: 311 ctcacacctttgtgccatcggcatcagcagcataaacctggccatattcgcccttgtcat 370 |||| |||||||||||||| |||||| |||| ||||||||||||| ||||||||||||| Sbjct: 147701 ctcagacctttgtgccatcaacatcagaagcaaaaacctggccataatcgcccttgtcat 147642 Query: 371 cctcatcctcatccagatagtcagcccttgcattgagggccagcatctggcaaacaagcc 430 |||||||| |||||||||| |||||||||||| || ||||||||||||||||||| Sbjct: 147641 cctcatcc------agatagtcagaccttgcattgagagctagcatctggcaaacaagcc 147588 Query: 431 agaacagagcagcatcaagggccaggaaagcggcgcctccgaagaggccggtctttgcag 490 |||| ||||||||||||||||||||||||||||| ||||| |||||||| ||||| |||| Sbjct: 147587 agaagagagcagcatcaagggccaggaaagcggctcctccaaagaggccagtcttcgcag 147528 Query: 491 tggggcacagggtatccatgtcatggtgaacgttactggtgcgatggtggccctccgtga 550 | |||||| ||||||||| ||||||||| | ||| || | || || | ||||| |||| Sbjct: 147527 tagggcactgggtatccaggtcatggtggatgttgttgcttcggtgaagaccctcggtga 147468 Query: 551 tcgttgcccagagcagcattgcaaaagccagagctga 587 |||||||||||||| ||||||||| ||||||||||| Sbjct: 147467 ccgttgcccagagcaacattgcaaacgccagagctga 147431 Score = 54.0 bits (27), Expect = 6e-04 Identities = 63/75 (84%) Strand = Plus / Minus Query: 594 ctcagcaataacaaagaagacggacaagctggtgctctgaaataacgctccacgaggaac 653 |||||||||||| ||||| | || ||||||| ||| ||||||| ||||| |||||||| Sbjct: 147029 ctcagcaataacgaagaacgcagataagctggcgcttcgaaataatgctccgcgaggaac 146970 Query: 654 cgacttgcccttgta 668 ||||||| |||||| Sbjct: 146969 agacttgctcttgta 146955
>gb|AF325198.1|AF325198 Triticum aestivum LRR14 (Lrr14), TAK14 (TAK14), and LRK14 (Lrk14) genes, complete cds; and unknown gene Length = 43606 Score = 159 bits (80), Expect = 1e-35 Identities = 134/150 (89%), Gaps = 4/150 (2%) Strand = Plus / Plus Query: 119 tactccctccgttcactattataagatgttccagcttt---ctgatttgaatgtatatag 175 |||||||||||||||| | |||||||||||| | |||| |||||| | |||||||||| Sbjct: 40275 tactccctccgttcacaaatataagatgttctaacttttttctgattcggatgtatatag 40334 Query: 176 acgcattttagtgtgtttgttcactcatttcagtccgtatgtagttcatattaaaatatc 235 ||||||||||| ||||||||||||||||||||||| ||||||||| |||||| ||||||| Sbjct: 40335 acgcattttag-gtgtttgttcactcatttcagtctgtatgtagtccatattgaaatatc 40393 Query: 236 caaaacatctaatatttgtgatcggaggga 265 |||||||||| ||||||| || |||||||| Sbjct: 40394 caaaacatcttatatttgggaacggaggga 40423
>gb|AF490468.1| Hordeum vulgare subsp. vulgare cultivar Morex CONSTANS-like protein (CO1) gene, complete cds Length = 4071 Score = 139 bits (70), Expect = 1e-29 Identities = 130/149 (87%), Gaps = 2/149 (1%) Strand = Plus / Minus Query: 119 tactccctccgttcactattataagatgttccagcttt--ctgatttgaatgtatataga 176 |||||||||||| ||| ||||||||||| |||||| ||| |||| ||| ||||| | Sbjct: 178 tactccctccgtccacagatataagatgttttagctttttctgctttggatgcatataca 119 Query: 177 cgcattttagtgtgtttgttcactcatttcagtccgtatgtagttcatattaaaatatcc 236 | |||||||||||||||||||||| ||||||||||||||||||| || ||||||||||| Sbjct: 118 cacattttagtgtgtttgttcacttatttcagtccgtatgtagtccacattaaaatatct 59 Query: 237 aaaacatctaatatttgtgatcggaggga 265 ||||||||| |||||||||| |||||||| Sbjct: 58 aaaacatcttatatttgtgaacggaggga 30 Score = 103 bits (52), Expect = 7e-19 Identities = 110/126 (87%), Gaps = 5/126 (3%) Strand = Plus / Minus Query: 119 tactccctccgttcactattataagatgttccagcttt---ctgatttgaatgtatatag 175 |||||| |||||||||||||||||||||||| | | || |||||| || ||||||||| Sbjct: 3051 tactccttccgttcactattataagatgttctaaccttttcctgattgga-tgtatatag 2993 Query: 176 acgcattttagtgtgtttgttcactcatttcagtccgtatgtagttcatattaaaatatc 235 ||||||||||||||||||||| |||||||| |||| |||||||| ||| || ||||||| Sbjct: 2992 -cgcattttagtgtgtttgttcgctcatttcggtccttatgtagtccatcttgaaatatc 2934 Query: 236 caaaac 241 |||||| Sbjct: 2933 caaaac 2928 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 118 atactccctccgttcactattataaga 144 ||||||||||| ||||||||||||||| Sbjct: 2900 atactccctccattcactattataaga 2926 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 118 atactccctccgttcactattataagatgtt 148 ||||||||||||||||| | ||||||||||| Sbjct: 26 atactccctccgttcacaaatataagatgtt 56
>emb|X66013.1|TACATHBG T.aestivum gene for cathepsin B (Al16) Length = 4792 Score = 109 bits (55), Expect = 1e-20 Identities = 106/121 (87%), Gaps = 4/121 (3%) Strand = Plus / Plus Query: 124 cctccgttcactattataagatgttccagcttt---ctgatttgaatgtatatagacgca 180 |||| ||||||||||||||||||||| | |||| || | ||| |||||| ||||| | Sbjct: 2848 cctctgttcactattataagatgttctaacttttttctaaattggatgtatgtagacacg 2907 Query: 181 ttttagtgtgtttgttc-actcatttcagtccgtatgtagttcatattaaaatatccaaa 239 ||||||||||||||||| ||||||||||||||||||||||| |||||| ||||||||||| Sbjct: 2908 ttttagtgtgtttgttccactcatttcagtccgtatgtagtccatattgaaatatccaaa 2967 Query: 240 a 240 | Sbjct: 2968 a 2968
>gb|AF490467.1| Hordeum vulgare subsp. vulgare cultivar Igri CONSTANS-like protein (CO1) gene, complete cds Length = 2252 Score = 103 bits (52), Expect = 7e-19 Identities = 110/126 (87%), Gaps = 5/126 (3%) Strand = Plus / Minus Query: 119 tactccctccgttcactattataagatgttccagcttt---ctgatttgaatgtatatag 175 |||||| |||||||||||||||||||||||| | | || |||||| || ||||||||| Sbjct: 1656 tactccttccgttcactattataagatgttctaaccttttcctgattgga-tgtatatag 1598 Query: 176 acgcattttagtgtgtttgttcactcatttcagtccgtatgtagttcatattaaaatatc 235 ||||||||||||||||||||| |||||||| |||| |||||||| ||| || ||||||| Sbjct: 1597 -cgcattttagtgtgtttgttcgctcatttcggtccttatgtagtccatcttgaaatatc 1539 Query: 236 caaaac 241 |||||| Sbjct: 1538 caaaac 1533 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 118 atactccctccgttcactattataaga 144 ||||||||||| ||||||||||||||| Sbjct: 1505 atactccctccattcactattataaga 1531
>dbj|AB182943.1| Triticum aestivum Wknox1a gene for KN1 homeobox protein, complete cds Length = 9755 Score = 101 bits (51), Expect = 3e-18 Identities = 60/63 (95%) Strand = Plus / Plus Query: 181 ttttagtgtgtttgttcactcatttcagtccgtatgtagttcatattaaaatatccaaaa 240 ||||||||||||||||||| |||||||||| ||||||||| ||||||||||||||||||| Sbjct: 8629 ttttagtgtgtttgttcacccatttcagtctgtatgtagtgcatattaaaatatccaaaa 8688 Query: 241 cat 243 ||| Sbjct: 8689 cat 8691
>dbj|AB182945.1| Triticum aestivum Wknox1d gene for KN1 homeobox protein, complete cds Length = 9086 Score = 95.6 bits (48), Expect = 2e-16 Identities = 60/64 (93%) Strand = Plus / Plus Query: 193 tgttcactcatttcagtccgtatgtagttcatattaaaatatccaaaacatctaatattt 252 |||||||||||||||||||||||||||| |||| ||||||||||||||||| | |||||| Sbjct: 7991 tgttcactcatttcagtccgtatgtagtccatactaaaatatccaaaacatattatattt 8050 Query: 253 gtga 256 |||| Sbjct: 8051 gtga 8054 Score = 77.8 bits (39), Expect = 4e-11 Identities = 51/55 (92%) Strand = Plus / Plus Query: 166 atgtatatagacgcattttagtgtgtttgttcactcatttcagtccgtatgtagt 220 |||||||||||| ||||| ||||||||||||||||||||||||| ||||||||| Sbjct: 7933 atgtatatagacacatttgagtgtgtttgttcactcatttcagtttgtatgtagt 7987
>gb|AY951944.1| Triticum monococcum TmBAC 21C6 FR-Am2 locus, genomic sequence Length = 190469 Score = 63.9 bits (32), Expect = 6e-07 Identities = 35/36 (97%) Strand = Plus / Minus Query: 170 atatagacgcattttagtgtgtttgttcactcattt 205 ||||| |||||||||||||||||||||||||||||| Sbjct: 36300 atatatacgcattttagtgtgtttgttcactcattt 36265 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 166 atgtatatagacgcattttagtgtgtttgttcactcatttcagtccgtatgtagttcata 225 |||||||||||| | ||||| |||| ||||||||||| ||||||||||||||||| Sbjct: 173021 atgtatatagacataatttagagtgtagattcactcattttgttccgtatgtagttcata 172962 Query: 226 ttaaaatat 234 ||||||||| Sbjct: 172961 ttaaaatat 172953 Score = 44.1 bits (22), Expect = 0.59 Identities = 28/30 (93%) Strand = Plus / Plus Query: 119 tactccctccgttcactattataagatgtt 148 |||||||| ||||||||||||||| ||||| Sbjct: 36205 tactcccttcgttcactattataaaatgtt 36234
>emb|AJ841697.1| Poa pratensis serk2 gene for somatic embryogenesis receptor-like kinase 2, exons 1-11, allele 1 Length = 5290 Score = 58.0 bits (29), Expect = 4e-05 Identities = 62/73 (84%) Strand = Plus / Plus Query: 173 tagacgcattttagtgtgtttgttcactcatttcagtccgtatgtagttcatattaaaat 232 ||||||| ||||||||||| |||||||| ||||||| |||||||||| | ||| |||| Sbjct: 644 tagacgctttttagtgtgtaggttcactcttttcagtgcgtatgtagtctacattgaaat 703 Query: 233 atccaaaacatct 245 ||| |||| |||| Sbjct: 704 atcgaaaatatct 716
>dbj|AP006372.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT36C05, TM0215b, complete sequence Length = 84914 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 112 taaaatatactccctccgttcactattataag 143 ||||||||||||||||||||| |||||||||| Sbjct: 79303 taaaatatactccctccgttccctattataag 79272
>gb|DQ257593.1| Hordeum vulgare subsp. vulgare clone 29-26A-LB flanking T-DNA insertion sequence Length = 623 Score = 54.0 bits (27), Expect = 6e-04 Identities = 77/92 (83%), Gaps = 5/92 (5%) Strand = Plus / Minus Query: 166 atgtatatagacgcattttagtgtgtttgttcactcatttcagtccgtatgta----gtt 221 |||||||||||| | |||||||| |||||||||||| ||| ||||||||||| || Sbjct: 349 atgtatatagacacgttttagtgcgtttgttcactcgttt-ggtccgtatgtaggtggtc 291 Query: 222 catattaaaatatccaaaacatctaatatttg 253 |||||| |||| || ||||||||| ||||||| Sbjct: 290 catattgaaatgtcgaaaacatcttatatttg 259
>gb|DQ175915.1| Hordeum vulgare subsp. vulgare clone 29-26A-LB flanking T-DNA insertion sequence Length = 664 Score = 54.0 bits (27), Expect = 6e-04 Identities = 77/92 (83%), Gaps = 5/92 (5%) Strand = Plus / Plus Query: 166 atgtatatagacgcattttagtgtgtttgttcactcatttcagtccgtatgta----gtt 221 |||||||||||| | |||||||| |||||||||||| ||| ||||||||||| || Sbjct: 275 atgtatatagacacgttttagtgcgtttgttcactcgttt-ggtccgtatgtaggtggtc 333 Query: 222 catattaaaatatccaaaacatctaatatttg 253 |||||| |||| || ||||||||| ||||||| Sbjct: 334 catattgaaatgtcgaaaacatcttatatttg 365
>gb|AC141110.7| Medicago truncatula clone mth2-17i10, complete sequence Length = 113345 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Plus Query: 115 aatatactccctccgttcactattataag 143 ||||||||||||||| ||||||||||||| Sbjct: 28874 aatatactccctccggtcactattataag 28902
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Plus Query: 113 aaaatatactccctccgttcactattata 141 ||||||||||||||||||||| ||||||| Sbjct: 9107475 aaaatatactccctccgttcaatattata 9107503 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 113 aaaatatactccctccgttca 133 ||||||||||||||||||||| Sbjct: 19910587 aaaatatactccctccgttca 19910607 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 112 taaaatatactccctccgttc 132 ||||||||||||||||||||| Sbjct: 19146356 taaaatatactccctccgttc 19146376 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 taaaatatactccctccgtt 131 |||||||||||||||||||| Sbjct: 16218967 taaaatatactccctccgtt 16218948 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 taaaatatactccctccgtt 131 |||||||||||||||||||| Sbjct: 14926860 taaaatatactccctccgtt 14926841
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Minus Query: 113 aaaatatactccctccgttcactattata 141 ||||||||||||||||||||| ||||||| Sbjct: 27236183 aaaatatactccctccgttcaatattata 27236155 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 112 taaaatatactccctccgttc 132 ||||||||||||||||||||| Sbjct: 22316251 taaaatatactccctccgttc 22316271 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 taaaatatactccctccgtt 131 |||||||||||||||||||| Sbjct: 26790411 taaaatatactccctccgtt 26790392 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 taaaatatactccctccgtt 131 |||||||||||||||||||| Sbjct: 5961123 taaaatatactccctccgtt 5961104 Score = 40.1 bits (20), Expect = 9.2 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 117 tatactccctccgttcactattataagatgtt 148 ||||||||||||||||| | |||||||||||| Sbjct: 5919531 tatactccctccgttca-tgttataagatgtt 5919561 Score = 40.1 bits (20), Expect = 9.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 115 aatatactccctccgttcactattataa 142 ||||||||||||||||| ||||||||| Sbjct: 5607695 aatatactccctccgtttcctattataa 5607668
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Plus Query: 113 aaaatatactccctccgttcactattata 141 ||||||||||||||||||||| ||||||| Sbjct: 6638608 aaaatatactccctccgttcaatattata 6638636 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 111 ctaaaatatactccctccgttc 132 |||||||||||||||||||||| Sbjct: 14068842 ctaaaatatactccctccgttc 14068821 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 109 atctaaaatatactccctccgttca 133 ||||||||| ||||||||||||||| Sbjct: 22141207 atctaaaatgtactccctccgttca 22141183
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Plus Query: 113 aaaatatactccctccgttcactattata 141 ||||||||||||||||||||| ||||||| Sbjct: 25541816 aaaatatactccctccgttcaatattata 25541844 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Minus Query: 113 aaaatatactccctccgttcactattata 141 ||||||||||||||||||||| ||||||| Sbjct: 24189773 aaaatatactccctccgttcaatattata 24189745 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Minus Query: 113 aaaatatactccctccgttcactattata 141 ||||||||||||||||||||| ||||||| Sbjct: 23298506 aaaatatactccctccgttcaatattata 23298478
>dbj|AP004457.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0013B04 Length = 141319 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Minus Query: 113 aaaatatactccctccgttcactattata 141 ||||||||||||||||||||| ||||||| Sbjct: 97857 aaaatatactccctccgttcaatattata 97829
>dbj|AP006449.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1106B03 Length = 155540 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Plus Query: 113 aaaatatactccctccgttcactattata 141 ||||||||||||||||||||| ||||||| Sbjct: 49716 aaaatatactccctccgttcaatattata 49744
>dbj|AP004620.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0605H02 Length = 175547 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Minus Query: 113 aaaatatactccctccgttcactattata 141 ||||||||||||||||||||| ||||||| Sbjct: 56112 aaaatatactccctccgttcaatattata 56084
>dbj|AP005907.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1151D08 Length = 152824 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Plus Query: 113 aaaatatactccctccgttcactattata 141 ||||||||||||||||||||| ||||||| Sbjct: 137278 aaaatatactccctccgttcaatattata 137306
>dbj|AP004765.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0711H09 Length = 185858 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Plus Query: 113 aaaatatactccctccgttcactattata 141 ||||||||||||||||||||| ||||||| Sbjct: 173132 aaaatatactccctccgttcaatattata 173160
>dbj|AP004761.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0686C03 Length = 164529 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Plus Query: 113 aaaatatactccctccgttcactattata 141 ||||||||||||||||||||| ||||||| Sbjct: 28507 aaaatatactccctccgttcaatattata 28535
>dbj|AP004557.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0028A08 Length = 150818 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Minus Query: 113 aaaatatactccctccgttcactattata 141 ||||||||||||||||||||| ||||||| Sbjct: 143259 aaaatatactccctccgttcaatattata 143231
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Plus Query: 113 aaaatatactccctccgttcactattata 141 ||||||||||||||||||||| ||||||| Sbjct: 9107378 aaaatatactccctccgttcaatattata 9107406 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 113 aaaatatactccctccgttca 133 ||||||||||||||||||||| Sbjct: 19836801 aaaatatactccctccgttca 19836821 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 112 taaaatatactccctccgttc 132 ||||||||||||||||||||| Sbjct: 19072583 taaaatatactccctccgttc 19072603 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 taaaatatactccctccgtt 131 |||||||||||||||||||| Sbjct: 16172200 taaaatatactccctccgtt 16172181 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 taaaatatactccctccgtt 131 |||||||||||||||||||| Sbjct: 14881143 taaaatatactccctccgtt 14881124
>emb|AL713903.5|CNS07YQ3 Oryza sativa chromosome 12, . BAC OJ1471_C07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 103007 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Minus Query: 113 aaaatatactccctccgttcactattata 141 ||||||||||||||||||||| ||||||| Sbjct: 10618 aaaatatactccctccgttcaatattata 10590
>emb|AL713954.3|CNS07YPZ Oryza sativa chromosome 12, . BAC OJ1134_G02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 121600 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Minus Query: 113 aaaatatactccctccgttcactattata 141 ||||||||||||||||||||| ||||||| Sbjct: 99352 aaaatatactccctccgttcaatattata 99324
>gb|AC153352.19| Medicago truncatula clone mth2-103l4, complete sequence Length = 130178 Score = 48.1 bits (24), Expect = 0.038 Identities = 27/28 (96%) Strand = Plus / Plus Query: 116 atatactccctccgttcactattataag 143 |||||||||||||| ||||||||||||| Sbjct: 103256 atatactccctccggtcactattataag 103283 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 119 tactccctccgttcactattataag 143 ||||||||||| ||||||||||||| Sbjct: 27098 tactccctccggtcactattataag 27074
>gb|AC148609.23| Medicago truncatula clone mth2-58e8, complete sequence Length = 132218 Score = 48.1 bits (24), Expect = 0.038 Identities = 27/28 (96%) Strand = Plus / Plus Query: 115 aatatactccctccgttcactattataa 142 ||||||||||||||| |||||||||||| Sbjct: 126715 aatatactccctccggtcactattataa 126742 Score = 48.1 bits (24), Expect = 0.038 Identities = 27/28 (96%) Strand = Plus / Plus Query: 115 aatatactccctccgttcactattataa 142 ||||||||||||||| |||||||||||| Sbjct: 113127 aatatactccctccggtcactattataa 113154 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 119 tactccctccgttcactattataag 143 ||||||||||| ||||||||||||| Sbjct: 126826 tactccctccggtcactattataag 126802 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 119 tactccctccgttcactattataag 143 ||||||||||| ||||||||||||| Sbjct: 113238 tactccctccggtcactattataag 113214
>gb|AY821693.1| Australopyrum velutinum beta amylase gene, partial cds; and Stowaway MITE, complete sequence Length = 1595 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Plus Query: 170 atatagacgcattttagtgtgtttgttcactcatttcagtccgtatgtagttcatatta 228 ||||||||| ||||||| |||| ||||||||||| |||||||||||| ||||||| Sbjct: 1279 atatagacgtattttagagtgtagattcactcattttgctccgtatgtagtccatatta 1337
>gb|AY821692.1| Australopyrum retrofractum beta amylase gene, partial cds; and Stowaway MITE, complete sequence Length = 1602 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Plus Query: 170 atatagacgcattttagtgtgtttgttcactcatttcagtccgtatgtagttcatatta 228 ||||||||| ||||||| |||| ||||||||||| |||||||||||| ||||||| Sbjct: 1285 atatagacgtattttagagtgtagattcactcattttgctccgtatgtagtccatatta 1343
>emb|CT025840.2| Medicago truncatula chromosome 5 clone mth4-39c23, COMPLETE SEQUENCE Length = 243542 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 117 tatactccctccgttcactattataag 143 ||||||||||||| ||||||||||||| Sbjct: 114560 tatactccctccggtcactattataag 114586
>gb|AC152176.5| Medicago truncatula clone mth2-65c4, complete sequence Length = 161536 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 117 tatactccctccgttcactattataag 143 ||||||||||||| ||||||||||||| Sbjct: 6611 tatactccctccggtcactattataag 6585
>gb|AC144743.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0009H09, complete sequence Length = 148740 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 110 tctaaaatatactccctccgttc 132 ||||||||||||||||||||||| Sbjct: 96009 tctaaaatatactccctccgttc 96031
>dbj|AB108249.1| Phleum pratense DNA, SSR, microsatellite A14-C02 Length = 522 Score = 46.1 bits (23), Expect = 0.15 Identities = 41/47 (87%) Strand = Plus / Minus Query: 169 tatatagacgcattttagtgtgtttgttcactcatttcagtccgtat 215 |||||||| || |||| || |||||||||||| ||||||||| |||| Sbjct: 376 tatatagatgcgttttggtatgtttgttcactaatttcagtctgtat 330
>dbj|AB182944.1| Triticum aestivum Wknox1b gene for KN1 homeobox protein, complete cds Length = 10847 Score = 46.1 bits (23), Expect = 0.15 Identities = 47/55 (85%) Strand = Plus / Plus Query: 166 atgtatatagacgcattttagtgtgtttgttcactcatttcagtccgtatgtagt 220 |||||||||||| |||||||| |||| ||||||||||| |||||||||||| Sbjct: 7764 atgtatatagacacattttagagtgtagattcactcattttgctccgtatgtagt 7818
>dbj|AP008952.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT45D07, TM0932b, complete sequence Length = 74001 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 117 tatactccctccgttcactattataag 143 |||||||||||||||| |||||||||| Sbjct: 35938 tatactccctccgttccctattataag 35912
>dbj|AP006632.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT16I03, TM0056, complete sequence Length = 102883 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 117 tatactccctccgttcactattataag 143 |||||||||||||||| |||||||||| Sbjct: 52065 tatactccctccgttccctattataag 52039
>gb|AY273809.1| Mus musculus CASK interacting nucleosome assembly protein mRNA, complete cds Length = 2034 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 362 ccttgtcatcctcatcctcatc 383 |||||||||||||||||||||| Sbjct: 526 ccttgtcatcctcatcctcatc 505
>gb|AC166313.2| Medicago truncatula chromosome 7 BAC clone mte1-4j13, complete sequence Length = 123373 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Plus Query: 118 atactccctccgttcactattataag 143 |||||||||||| ||||||||||||| Sbjct: 62188 atactccctccgatcactattataag 62213
>gb|AC135414.31| Medicago truncatula clone mth2-8n20, complete sequence Length = 127018 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Plus Query: 118 atactccctccgttcactattataag 143 |||||||||||| ||||||||||||| Sbjct: 98000 atactccctccggtcactattataag 98025
>gb|AC147009.5| Medicago truncatula clone mth2-139j3, complete sequence Length = 125303 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Minus Query: 118 atactccctccgttcactattataag 143 |||||||||||| ||||||||||||| Sbjct: 29019 atactccctccggtcactattataag 28994
>gb|AY303171.1| Solanum bulbocastanum chromosome 8 clone 177O13, complete sequence Length = 163635 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 118 atactccctccgttcactatta 139 |||||||||||||||||||||| Sbjct: 99118 atactccctccgttcactatta 99097
>ref|NM_029836.3| Mus musculus TSPY-like 2 (Tspyl2), mRNA Length = 2776 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 362 ccttgtcatcctcatcctcatc 383 |||||||||||||||||||||| Sbjct: 685 ccttgtcatcctcatcctcatc 664
>ref|NM_182501.2| Homo sapiens MTERF domain containing 2 (MTERFD2), mRNA Length = 4545 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 366 gtcatcctcatcctcatccaga 387 |||||||||||||||||||||| Sbjct: 1071 gtcatcctcatcctcatccaga 1050
>emb|CR936324.2| Medicago truncatula chromosome 5 clone mth2-62a22, COMPLETE SEQUENCE Length = 121881 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Minus Query: 118 atactccctccgttcactattataag 143 |||||||||||| ||||||||||||| Sbjct: 41152 atactccctccggtcactattataag 41127
>emb|CR933104.2| Medicago truncatula chromosome 5 clone mth2-25b3, COMPLETE SEQUENCE Length = 117135 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Plus Query: 118 atactccctccgttcactattataag 143 |||||||||||| ||||||||||||| Sbjct: 20658 atactccctccggtcactattataag 20683
>emb|CR932962.2| Medicago truncatula chromosome 5 clone mte1-70c24, COMPLETE SEQUENCE Length = 128704 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Plus Query: 118 atactccctccgttcactattataag 143 |||||||||||| ||||||||||||| Sbjct: 36399 atactccctccgatcactattataag 36424
>emb|CR615652.1| full-length cDNA clone CS0DF037YL05 of Fetal brain of Homo sapiens (human) Length = 1531 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 366 gtcatcctcatcctcatccaga 387 |||||||||||||||||||||| Sbjct: 1014 gtcatcctcatcctcatccaga 993
>gb|BC053533.1| Homo sapiens MTERF domain containing 2, mRNA (cDNA clone MGC:61716 IMAGE:4417008), complete cds Length = 1612 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 366 gtcatcctcatcctcatccaga 387 |||||||||||||||||||||| Sbjct: 1047 gtcatcctcatcctcatccaga 1026
>dbj|AK131298.1| Homo sapiens cDNA FLJ16261 fis, clone IMR322007078 Length = 2410 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 366 gtcatcctcatcctcatccaga 387 |||||||||||||||||||||| Sbjct: 1868 gtcatcctcatcctcatccaga 1847
>emb|CR622447.1| full-length cDNA clone CS0DC010YC23 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1536 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 366 gtcatcctcatcctcatccaga 387 |||||||||||||||||||||| Sbjct: 1017 gtcatcctcatcctcatccaga 996
>emb|CR617083.1| full-length cDNA clone CS0DI071YA05 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1517 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 366 gtcatcctcatcctcatccaga 387 |||||||||||||||||||||| Sbjct: 1017 gtcatcctcatcctcatccaga 996
>emb|CR607675.1| full-length cDNA clone CS0DF022YI07 of Fetal brain of Homo sapiens (human) Length = 1529 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 366 gtcatcctcatcctcatccaga 387 |||||||||||||||||||||| Sbjct: 1017 gtcatcctcatcctcatccaga 996
>emb|CR590225.1| full-length cDNA clone CS0DC003YH23 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1570 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 366 gtcatcctcatcctcatccaga 387 |||||||||||||||||||||| Sbjct: 1056 gtcatcctcatcctcatccaga 1035
>gb|AY972619.1| Hordeum vulgare subsp. vulgare cultivar Morex subclone NRG098 cyclic nucleotide-gated ion channel 4 (Nec1) gene, complete cds Length = 9090 Score = 44.1 bits (22), Expect = 0.59 Identities = 46/54 (85%) Strand = Plus / Plus Query: 166 atgtatatagacgcattttagtgtgtttgttcactcatttcagtccgtatgtag 219 |||||||||||| ||||||| |||| ||||||||||| |||||||||||| Sbjct: 8425 atgtatatagacatattttagagtgtagattcactcattttggtccgtatgtag 8478
>gb|AC148762.2| Medicago truncatula chromosome 7 BAC clone mth2-15p5, complete sequence Length = 136116 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Minus Query: 118 atactccctccgttcactattataag 143 |||||||||||| ||||||||||||| Sbjct: 48748 atactccctccgatcactattataag 48723
>dbj|AK018700.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130307F10 product:similar to CTCL TUMOR ANTIGEN SE20-4 (CELL DIVISION AUTOANTIGEN 1 NUCLEOLAR PROTEIN) [Homo sapiens], full insert sequence Length = 1302 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 362 ccttgtcatcctcatcctcatc 383 |||||||||||||||||||||| Sbjct: 627 ccttgtcatcctcatcctcatc 606
>tpg|BK000279.1| TPA: TPA_exp: Mus musculus nucleolar TGF-beta1 target protein mRNA, complete cds Length = 2735 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 362 ccttgtcatcctcatcctcatc 383 |||||||||||||||||||||| Sbjct: 627 ccttgtcatcctcatcctcatc 606
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 110 tctaaaatatactccctccgtt 131 |||||||||||||||||||||| Sbjct: 17474000 tctaaaatatactccctccgtt 17474021 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 taaaatatactccctccgtt 131 |||||||||||||||||||| Sbjct: 35279423 taaaatatactccctccgtt 35279404 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 taaaatatactccctccgtt 131 |||||||||||||||||||| Sbjct: 35279163 taaaatatactccctccgtt 35279182 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 ctaaaatatactccctccgt 130 |||||||||||||||||||| Sbjct: 19173964 ctaaaatatactccctccgt 19173983 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 ctaaaatatactccctccgt 130 |||||||||||||||||||| Sbjct: 13941449 ctaaaatatactccctccgt 13941430
>gb|AC084214.19|AC084214 Mus musculus X BAC RP23-382J5 (Roswell Park Cancer Institute Mouse BAC Library) complete sequence Length = 56321 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 362 ccttgtcatcctcatcctcatc 383 |||||||||||||||||||||| Sbjct: 24795 ccttgtcatcctcatcctcatc 24774
>gb|BC043694.1| Mus musculus TSPY-like 2, mRNA (cDNA clone IMAGE:5249457), with apparent retained intron Length = 2482 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 362 ccttgtcatcctcatcctcatc 383 |||||||||||||||||||||| Sbjct: 441 ccttgtcatcctcatcctcatc 420
>gb|BC004006.1| Mus musculus TSPY-like 2, mRNA (cDNA clone IMAGE:3492814), containing frame-shift errors Length = 2444 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 362 ccttgtcatcctcatcctcatc 383 |||||||||||||||||||||| Sbjct: 333 ccttgtcatcctcatcctcatc 312
>gb|BC054393.1| Mus musculus TSPY-like 2, transcript variant 1, mRNA (cDNA clone MGC:62815 IMAGE:6491672), complete cds Length = 2696 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 362 ccttgtcatcctcatcctcatc 383 |||||||||||||||||||||| Sbjct: 605 ccttgtcatcctcatcctcatc 584
>gb|AC005237.2|AC005237 Homo sapiens BAC clone RP11-556H17 from 2, complete sequence Length = 175179 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 366 gtcatcctcatcctcatccaga 387 |||||||||||||||||||||| Sbjct: 64076 gtcatcctcatcctcatccaga 64097
>dbj|AP005732.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0014M19 Length = 129270 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 111 ctaaaatatactccctccgttc 132 |||||||||||||||||||||| Sbjct: 47777 ctaaaatatactccctccgttc 47756
>dbj|AP004999.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0040H05 Length = 172623 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 110 tctaaaatatactccctccgtt 131 |||||||||||||||||||||| Sbjct: 85997 tctaaaatatactccctccgtt 86018
>emb|BX648184.1|HSM808332 Homo sapiens mRNA; cDNA DKFZp686L13129 (from clone DKFZp686L13129) Length = 4539 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 366 gtcatcctcatcctcatccaga 387 |||||||||||||||||||||| Sbjct: 1060 gtcatcctcatcctcatccaga 1039
>emb|CT010464.7| M.truncatula DNA sequence from clone MTH2-95O22 on chromosome 3, complete sequence Length = 117153 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 110 tctaaaatatactccctccgtt 131 |||||||||||||||||||||| Sbjct: 15224 tctaaaatatactccctccgtt 15245 Score = 40.1 bits (20), Expect = 9.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 116 atatactccctccgttcactattataag 143 |||||| ||||||| ||||||||||||| Sbjct: 62119 atatacaccctccggtcactattataag 62146
>emb|CT033768.1| Medicago truncatula chromosome 5 clone mte1-72b19, COMPLETE SEQUENCE Length = 121254 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Plus Query: 118 atactccctccgttcactattataag 143 |||||||||||| ||||||||||||| Sbjct: 21133 atactccctccgatcactattataag 21158 Score = 40.1 bits (20), Expect = 9.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 112 taaaatatactccctccgttcactattataag 143 ||||||||||| ||||| ||||||||||||| Sbjct: 30297 taaaatatactttctccggtcactattataag 30328
>emb|CT025838.2| Medicago truncatula chromosome 5 clone mth2-124f10, COMPLETE SEQUENCE Length = 113309 Score = 44.1 bits (22), Expect = 0.59 Identities = 31/34 (91%) Strand = Plus / Minus Query: 111 ctaaaatatactccctccgttcactattataaga 144 ||||| ||||| ||||||| |||||||||||||| Sbjct: 71828 ctaaactatacaccctccgatcactattataaga 71795
>dbj|AP006540.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT01C03, TM0559, complete sequence Length = 80535 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Plus Query: 118 atactccctccgttcactattataag 143 ||||||||||||||| |||||||||| Sbjct: 46845 atactccctccgttccctattataag 46870 Score = 40.1 bits (20), Expect = 9.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 117 tatactccctccgttcactattataaga 144 |||||||||||||||| | ||||||||| Sbjct: 61294 tatactccctccgttctcaattataaga 61267
>dbj|AP006365.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT31H17, TM0171, complete sequence Length = 126380 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Minus Query: 118 atactccctccgttcactattataag 143 ||||||||||||||| |||||||||| Sbjct: 50974 atactccctccgttccctattataag 50949
>emb|AL731727.18| Mouse DNA sequence from clone RP23-147K15 on chromosome X, complete sequence Length = 64392 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 362 ccttgtcatcctcatcctcatc 383 |||||||||||||||||||||| Sbjct: 33327 ccttgtcatcctcatcctcatc 33348
>gb|BC085279.1| Mus musculus RIKEN cDNA 2310040C09 gene, mRNA (cDNA clone MGC:102599 IMAGE:30438273), complete cds Length = 2968 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 366 gtcatcctcatcctcatccag 386 ||||||||||||||||||||| Sbjct: 1831 gtcatcctcatcctcatccag 1811
>gb|AC129717.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0079H23, complete sequence Length = 191765 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 111 ctaaaatatactccctccgtt 131 ||||||||||||||||||||| Sbjct: 76572 ctaaaatatactccctccgtt 76552
>ref|XM_323037.1| Neurospora crassa OR74A hypothetical protein (NCU03736.1) partial mRNA Length = 1224 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 365 tgtcatcctcatcctcatcca 385 ||||||||||||||||||||| Sbjct: 697 tgtcatcctcatcctcatcca 677
>ref|XM_956419.1| Neurospora crassa OR74A hypothetical protein (NCU03736.1) partial mRNA Length = 1224 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 365 tgtcatcctcatcctcatcca 385 ||||||||||||||||||||| Sbjct: 697 tgtcatcctcatcctcatcca 677
>gb|AC135925.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0560C03, complete sequence Length = 177861 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 111 ctaaaatatactccctccgtt 131 ||||||||||||||||||||| Sbjct: 133000 ctaaaatatactccctccgtt 132980
>ref|NM_178618.2| Mus musculus RIKEN cDNA 2310040C09 gene (2310040C09Rik), mRNA Length = 2940 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 366 gtcatcctcatcctcatccag 386 ||||||||||||||||||||| Sbjct: 1817 gtcatcctcatcctcatccag 1797
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 110 tctaaaatatactccctccgt 130 ||||||||||||||||||||| Sbjct: 34277094 tctaaaatatactccctccgt 34277074 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 taaaatatactccctccgtt 131 |||||||||||||||||||| Sbjct: 23455020 taaaatatactccctccgtt 23455039
>ref|XM_849714.1| PREDICTED: Canis familiaris similar to leucine rich repeat containing 45 (LOC611992), mRNA Length = 465 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 401 cattgagggccagcatctggc 421 ||||||||||||||||||||| Sbjct: 142 cattgagggccagcatctggc 122
>gb|AC109365.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0034P08, complete sequence Length = 173088 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 112 taaaatatactccctccgttc 132 ||||||||||||||||||||| Sbjct: 25047 taaaatatactccctccgttc 25027
>gb|AC146341.10| Medicago truncatula clone mth2-10g1, complete sequence Length = 147669 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 119 tactccctccgttcactattataag 143 ||||||||||| ||||||||||||| Sbjct: 129068 tactccctccgatcactattataag 129092
>gb|AC149306.9| Medicago truncatula clone mth2-88b8, complete sequence Length = 89880 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 119 tactccctccgttcactattataag 143 ||||||||||| ||||||||||||| Sbjct: 35727 tactccctccggtcactattataag 35751 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 367 tcatcctcatcctcatccag 386 |||||||||||||||||||| Sbjct: 52530 tcatcctcatcctcatccag 52511 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 367 tcatcctcatcctcatccag 386 |||||||||||||||||||| Sbjct: 43559 tcatcctcatcctcatccag 43540
>gb|AC139526.22| Medicago truncatula clone mth2-9b23, complete sequence Length = 141491 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 119 tactccctccgttcactattataag 143 ||||||||||| ||||||||||||| Sbjct: 57917 tactccctccgatcactattataag 57893
>gb|AC148239.7| Medicago truncatula clone mth2-5d7, complete sequence Length = 103609 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 112 taaaatatactccctccgttcactattataaga 144 |||||||||||||||||| || |||||||||| Sbjct: 54672 taaaatatactccctccggtccttattataaga 54704
>gb|AC109594.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0007P22, complete sequence Length = 148068 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 112 taaaatatactccctccgttc 132 ||||||||||||||||||||| Sbjct: 136565 taaaatatactccctccgttc 136545
>emb|AJ972481.1| Medicago truncatula nsp1-2 gene for Nodulation Signaling Pathway 1-2 protein Length = 6813 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 115 aatatactccctccgttcactattataag 143 |||||||||||||| ||||||||||||| Sbjct: 2794 aatatactccctcccatcactattataag 2822
>emb|AJ972480.1| Medicago truncatula nsp1-1 gene for Nodulation Signaling Pathway 1-1 protein Length = 6813 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 115 aatatactccctccgttcactattataag 143 |||||||||||||| ||||||||||||| Sbjct: 2794 aatatactccctcccatcactattataag 2822
>emb|AJ972478.1| Medicago truncatula NSP1 gene for Nodulation Signaling Pathway 1 protein Length = 6813 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 115 aatatactccctccgttcactattataag 143 |||||||||||||| ||||||||||||| Sbjct: 2794 aatatactccctcccatcactattataag 2822
>emb|AJ972473.1| Medicago truncatula partial NSP1 gene for Nodulation Signaling Pathway 1 protein Length = 63146 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 115 aatatactccctccgttcactattataag 143 |||||||||||||| ||||||||||||| Sbjct: 38369 aatatactccctcccatcactattataag 38341
>emb|AL513166.7| Human DNA sequence from clone RP11-261J10 on chromosome 1, complete sequence Length = 170817 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 129 gttcactattataagatgttc 149 ||||||||||||||||||||| Sbjct: 62155 gttcactattataagatgttc 62135
>emb|AL731627.3|OSJN00272 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0095E20, complete sequence Length = 138572 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 110 tctaaaatatactccctccgt 130 ||||||||||||||||||||| Sbjct: 101296 tctaaaatatactccctccgt 101316
>emb|CR931738.1| Medicago truncatula chromosome 5 clone mth2-56k10, COMPLETE SEQUENCE Length = 132450 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 118 atactccctccgttcactattataa 142 |||||||||||| |||||||||||| Sbjct: 89898 atactccctccgatcactattataa 89922
>emb|AL596209.13| Mouse DNA sequence from clone RP23-278F12 on chromosome 11 Contains the 3' end of the Ulk2 gene for Unc-51 like kinase 2 (C. elegans), the Prpsap2 gene for phosphoribosyl pyrophosphate synthetase-associated protein 2, the gene for a novel sodium/glucose cotransporter protein, the gene for a novel protein (2310040C09Rik), the Grap gene for GRB2-related adaptor protein and a CpG island, complete sequence Length = 186359 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 366 gtcatcctcatcctcatccag 386 ||||||||||||||||||||| Sbjct: 98559 gtcatcctcatcctcatccag 98579
>gb|AC096755.2| Homo sapiens BAC clone RP11-519M16 from 4, complete sequence Length = 182440 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 tcactattataagatgttcca 151 ||||||||||||||||||||| Sbjct: 116605 tcactattataagatgttcca 116585
>gb|AC013543.16| Homo sapiens chromosome 8, clone RP11-317H6, complete sequence Length = 177777 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 554 ttgcccagagcagcattgcaa 574 ||||||||||||||||||||| Sbjct: 4119 ttgcccagagcagcattgcaa 4139
>gb|AC025133.6| Homo sapiens chromosome 8, clone RP11-227F6, complete sequence Length = 161644 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 554 ttgcccagagcagcattgcaa 574 ||||||||||||||||||||| Sbjct: 79032 ttgcccagagcagcattgcaa 79012
>gb|AC169370.4| Sorghum bicolor clone SB_BBc0011I20, complete sequence Length = 135209 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 109 atctaaaatatactccctccg 129 ||||||||||||||||||||| Sbjct: 50249 atctaaaatatactccctccg 50229
>gb|AY007367.1| Lycopersicon esculentum tospovirus resistance protein C (Sw5-c), tospovirus resistance protein D (Sw5-d), and tospovirus resistance protein E (Sw5-e) genes, complete cds Length = 59465 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 364 ttgtcatcctcatcctcatcc 384 ||||||||||||||||||||| Sbjct: 38333 ttgtcatcctcatcctcatcc 38313
>emb|CR386256.1| Gallus gallus finished cDNA, clone ChEST133n8 Length = 1161 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 263 ggaatatatatataactaaac 283 ||||||||||||||||||||| Sbjct: 1071 ggaatatatatataactaaac 1091
>dbj|AK028566.1| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched library, clone:4732401E24 product:hypothetical Phospholipase D/nuclease structure containing protein, full insert sequence Length = 2940 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 366 gtcatcctcatcctcatccag 386 ||||||||||||||||||||| Sbjct: 1817 gtcatcctcatcctcatccag 1797
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 ctaaaatatactccctccgtt 131 ||||||||||||||||||||| Sbjct: 21762012 ctaaaatatactccctccgtt 21762032 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 110 tctaaaatatactccctccgt 130 ||||||||||||||||||||| Sbjct: 2485394 tctaaaatatactccctccgt 2485414 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 taaaatatactccctccgtt 131 |||||||||||||||||||| Sbjct: 13920874 taaaatatactccctccgtt 13920893 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 taaaatatactccctccgtt 131 |||||||||||||||||||| Sbjct: 2804919 taaaatatactccctccgtt 2804938
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 111 ctaaaatatactccctccgtt 131 ||||||||||||||||||||| Sbjct: 28688052 ctaaaatatactccctccgtt 28688032 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 taaaatatactccctccgtt 131 |||||||||||||||||||| Sbjct: 25643677 taaaatatactccctccgtt 25643696
>gb|AC105430.2| Homo sapiens chromosome 16 clone RP11-2C15, complete sequence Length = 105731 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 362 ccttgtcatcctcatcctcat 382 ||||||||||||||||||||| Sbjct: 63127 ccttgtcatcctcatcctcat 63147
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 110 tctaaaatatactccctccgt 130 ||||||||||||||||||||| Sbjct: 34367566 tctaaaatatactccctccgt 34367546 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 taaaatatactccctccgtt 131 |||||||||||||||||||| Sbjct: 23448048 taaaatatactccctccgtt 23448067
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 ctaaaatatactccctccgtt 131 ||||||||||||||||||||| Sbjct: 24300656 ctaaaatatactccctccgtt 24300676 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 238 aaacatctaatatttgtgatcggagggaa 266 ||||||| ||||||| ||||||||||||| Sbjct: 8113 aaacatcaaatatttatgatcggagggaa 8141 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 taaaatatactccctccgtt 131 |||||||||||||||||||| Sbjct: 38737884 taaaatatactccctccgtt 38737865
>gb|AC080094.5| Homo sapiens BAC clone RP11-1007E2 from 2, complete sequence Length = 134001 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 404 tgagggccagcatctggcaaa 424 ||||||||||||||||||||| Sbjct: 111980 tgagggccagcatctggcaaa 112000
>gb|AC078819.24| Homo sapiens 12q BAC RP11-490H24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 172319 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 271 tatataactaaacggtgctaa 291 ||||||||||||||||||||| Sbjct: 133226 tatataactaaacggtgctaa 133206
>gb|AC093018.4| Oryza sativa chromosome 3 BAC OSJNBb0081B07 genomic sequence, complete sequence Length = 143205 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 110 tctaaaatatactccctccgt 130 ||||||||||||||||||||| Sbjct: 57904 tctaaaatatactccctccgt 57924
>dbj|AP006170.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0042B15 Length = 157981 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 109 atctaaaatatactccctccgttca 133 ||||||||| ||||||||||||||| Sbjct: 62700 atctaaaatgtactccctccgttca 62676
>dbj|AP003314.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0046B10 Length = 142596 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 ctaaaatatactccctccgtt 131 ||||||||||||||||||||| Sbjct: 125220 ctaaaatatactccctccgtt 125240
>dbj|AP002866.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0410E01 Length = 166753 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 ctaaaatatactccctccgtt 131 ||||||||||||||||||||| Sbjct: 46560 ctaaaatatactccctccgtt 46580
>dbj|AP003727.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0672D08 Length = 173729 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 238 aaacatctaatatttgtgatcggagggaa 266 ||||||| ||||||| ||||||||||||| Sbjct: 5915 aaacatcaaatatttatgatcggagggaa 5943
>emb|AJ427978.1|OSA427978 Oryza sativa HAK9 gene for putative potasium transporter, exons 1-9 Length = 4425 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 ctaaaatatactccctccgtt 131 ||||||||||||||||||||| Sbjct: 4308 ctaaaatatactccctccgtt 4328
>emb|X81368.1|TAAWJL175 T.aestivumn (subclone pAWJL175) AWJL175 gene Length = 2374 Score = 42.1 bits (21), Expect = 2.3 Identities = 48/57 (84%) Strand = Plus / Plus Query: 164 gaatgtatatagacgcattttagtgtgtttgttcactcatttcagtccgtatgtagt 220 |||||||||||||| ||||||| |||| ||||||||||| |||||||||||| Sbjct: 2299 gaatgtatatagacatattttagagtgtagattcactcattttgctccgtatgtagt 2355
>dbj|AP003757.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1409_C08 Length = 90673 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 111 ctaaaatatactccctccgtt 131 ||||||||||||||||||||| Sbjct: 63222 ctaaaatatactccctccgtt 63202
>emb|CT573500.2| Medicago truncatula chromosome 5 clone mte1-57o10, COMPLETE SEQUENCE Length = 95579 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 119 tactccctccgttcactattataag 143 ||||||||||| ||||||||||||| Sbjct: 90149 tactccctccggtcactattataag 90125
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 112 taaaatatactccctccgttc 132 ||||||||||||||||||||| Sbjct: 22626162 taaaatatactccctccgttc 22626182 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 taaaatatactccctccgtt 131 |||||||||||||||||||| Sbjct: 27117646 taaaatatactccctccgtt 27117627 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 taaaatatactccctccgtt 131 |||||||||||||||||||| Sbjct: 18376789 taaaatatactccctccgtt 18376808 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 taaaatatactccctccgtt 131 |||||||||||||||||||| Sbjct: 6027600 taaaatatactccctccgtt 6027581 Score = 40.1 bits (20), Expect = 9.2 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 117 tatactccctccgttcactattataagatgtt 148 ||||||||||||||||| | |||||||||||| Sbjct: 5986008 tatactccctccgttca-tgttataagatgtt 5986038 Score = 40.1 bits (20), Expect = 9.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 115 aatatactccctccgttcactattataa 142 ||||||||||||||||| ||||||||| Sbjct: 5674172 aatatactccctccgtttcctattataa 5674145
>emb|AL513467.1|NC17E5 Neurospora crassa DNA linkage group V Cosmid contig 17E5 Length = 130049 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 365 tgtcatcctcatcctcatcca 385 ||||||||||||||||||||| Sbjct: 27950 tgtcatcctcatcctcatcca 27930
>emb|AL731752.4|CNS08C81 Oryza sativa chromosome 12, . BAC OJ1536_D01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 127026 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 112 taaaatatactccctccgttc 132 ||||||||||||||||||||| Sbjct: 79623 taaaatatactccctccgttc 79603
>emb|AL731888.5|CNS08C8S Oryza sativa chromosome 12, . BAC OJ1118_C12 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 165433 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 113 aaaatatactccctccgttca 133 ||||||||||||||||||||| Sbjct: 116673 aaaatatactccctccgttca 116653
>emb|AL606592.2|OSJN00024 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0006B20, complete sequence Length = 141915 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 ctaaaatatactccctccgtt 131 ||||||||||||||||||||| Sbjct: 73629 ctaaaatatactccctccgtt 73649
>dbj|AP008219.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, fosmid clone:OSJNOa264G09 Length = 31687 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 238 aaacatctaatatttgtgatcggagggaa 266 ||||||| ||||||| ||||||||||||| Sbjct: 8113 aaacatcaaatatttatgatcggagggaa 8141
>dbj|AP006710.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT09H02, TM0593a, complete sequence Length = 81390 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 119 tactccctccgttcactattataag 143 |||||||||||||| |||||||||| Sbjct: 62741 tactccctccgttccctattataag 62717
>dbj|AP006663.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT48G05, TM0358, complete sequence Length = 111995 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 119 tactccctccgttcactattataag 143 |||||||||||||| |||||||||| Sbjct: 51976 tactccctccgttccctattataag 52000
>dbj|AP006630.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT12F12, TM0028a, complete sequence Length = 60126 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 119 tactccctccgttcactattataag 143 |||||||||||||| |||||||||| Sbjct: 58840 tactccctccgttccctattataag 58816
>dbj|AP006430.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT33L13, TM0327, complete sequence Length = 105384 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 118 atactccctccgttcactattataa 142 ||||||||||||||| ||||||||| Sbjct: 96742 atactccctccgttccctattataa 96766
>dbj|AP006423.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT23C14, TM0311, complete sequence Length = 82652 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 119 tactccctccgttcactattataag 143 |||||||||||||| |||||||||| Sbjct: 68597 tactccctccgttccctattataag 68573
>dbj|AP006403.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT16P18, TM0289, complete sequence Length = 94172 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 119 tactccctccgttcactattataag 143 |||||||||||||| |||||||||| Sbjct: 74918 tactccctccgttccctattataag 74942
>dbj|AP006368.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT21K08, TM0191, complete sequence Length = 76693 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 119 tactccctccgttcactattataag 143 |||||||||||||| |||||||||| Sbjct: 11644 tactccctccgttccctattataag 11668
>dbj|AP006128.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT36M08, TM0213, complete sequence Length = 106033 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 116 atatactccctccgttcactattataaga 144 |||||||||||||||||| | |||||||| Sbjct: 32286 atatactccctccgttcatttttataaga 32314
>dbj|AP006116.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT40C04, TM0199, complete sequence Length = 123325 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 119 tactccctccgttcactattataag 143 |||||||||||||| |||||||||| Sbjct: 902 tactccctccgttccctattataag 878
>dbj|AP006108.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT11O06, TM0194, complete sequence Length = 108277 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 112 taaaatatactccctccgttc 132 ||||||||||||||||||||| Sbjct: 61674 taaaatatactccctccgttc 61694
>dbj|AP006098.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT10G08, TM0175, complete sequence Length = 108582 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 119 tactccctccgttcactattataag 143 |||||||||||||| |||||||||| Sbjct: 83663 tactccctccgttccctattataag 83687
>dbj|AP004896.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT16I07, TM0040, complete sequence Length = 92281 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 115 aatatactccctccgttcactattataag 143 ||||||| ||||||| ||||||||||||| Sbjct: 54744 aatatacaccctccggtcactattataag 54772
>dbj|AB058924.1| Hordeum vulgare gene for protein kinase HvPKABA1, complete cds, cultivar:Igri Length = 11684 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 112 taaaatatactccctccgttc 132 ||||||||||||||||||||| Sbjct: 7246 taaaatatactccctccgttc 7226
>gb|AC154034.1| Medicago truncatula chromosome 7 BAC clone mth2-71n23, complete sequence Length = 125195 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 tccgtatgtagttcatatta 228 |||||||||||||||||||| Sbjct: 46374 tccgtatgtagttcatatta 46393
>ref|XM_520821.1| PREDICTED: Pan troglodytes similar to DDX11 protein (LOC465368), mRNA Length = 4449 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 366 gtcatcctcatcctcatcca 385 |||||||||||||||||||| Sbjct: 891 gtcatcctcatcctcatcca 872
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 400 gcattgagggccagcatctg 419 |||||||||||||||||||| Sbjct: 2174977 gcattgagggccagcatctg 2174996
>ref|XM_529479.1| PREDICTED: Pan troglodytes LOC451824 (LOC451824), mRNA Length = 802 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 366 gtcatcctcatcctcatcca 385 |||||||||||||||||||| Sbjct: 388 gtcatcctcatcctcatcca 369
>ref|NM_030655.2| Homo sapiens DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 (CHL1-like helicase homolog, S. cerevisiae) (DDX11), transcript variant 3, mRNA Length = 4203 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 366 gtcatcctcatcctcatcca 385 |||||||||||||||||||| Sbjct: 1068 gtcatcctcatcctcatcca 1049
>ref|NM_030653.2| Homo sapiens DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 (CHL1-like helicase homolog, S. cerevisiae) (DDX11), transcript variant 1, mRNA Length = 3875 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 366 gtcatcctcatcctcatcca 385 |||||||||||||||||||| Sbjct: 838 gtcatcctcatcctcatcca 819
>ref|NM_004399.1| Homo sapiens DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 (CHL1-like helicase homolog, S. cerevisiae) (DDX11), transcript variant 2, mRNA Length = 3755 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 366 gtcatcctcatcctcatcca 385 |||||||||||||||||||| Sbjct: 872 gtcatcctcatcctcatcca 853
>gb|AF172282.1| Oryza sativa adh1-adh2 region Length = 339485 Score = 40.1 bits (20), Expect = 9.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 115 aatatactccctccgttcactattataa 142 ||||||||||||||||| ||||||||| Sbjct: 68270 aatatactccctccgtttcctattataa 68297
>gb|AE017343.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 3, complete sequence Length = 2105742 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 ttgtcatcctcatcctcatc 383 |||||||||||||||||||| Sbjct: 2007341 ttgtcatcctcatcctcatc 2007322
>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and SNF2P genes, complete cds; nucellin pseudogene, complete sequence; putative transposase, phosphatidylinositol phosphatidylcholine transfer protein sec14 cytosolic-like protein, and phytochrome P450-like protein genes, complete cds; and unknown genes Length = 438828 Score = 40.1 bits (20), Expect = 9.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 209 tccgtatgtagttcatattaaaatatccaaaa 240 |||||||||||| ||||||||||||| |||| Sbjct: 336123 tccgtatgtagtctatattaaaatatctaaaa 336092
>gb|AC150702.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone B1356E08, complete sequence Length = 136853 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 taaaatatactccctccgtt 131 |||||||||||||||||||| Sbjct: 76105 taaaatatactccctccgtt 76124
>gb|AC135190.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0064H09, complete sequence Length = 146742 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 taaaatatactccctccgtt 131 |||||||||||||||||||| Sbjct: 95041 taaaatatactccctccgtt 95022
>ref|XM_363887.1| Magnaporthe grisea 70-15 hypothetical protein (MG01813.4) partial mRNA Length = 4173 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 tgtcatcctcatcctcatcc 384 |||||||||||||||||||| Sbjct: 463 tgtcatcctcatcctcatcc 444
>gb|BC078152.1| Homo sapiens cDNA clone IMAGE:6061719, containing frame-shift errors Length = 3484 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 366 gtcatcctcatcctcatcca 385 |||||||||||||||||||| Sbjct: 874 gtcatcctcatcctcatcca 855
>gb|AY330623.1| Human papillomavirus type 71 isolate Qv23143, complete genome Length = 8038 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 ttgtcatcctcatcctcatc 383 |||||||||||||||||||| Sbjct: 977 ttgtcatcctcatcctcatc 958
>gb|AY330622.1| Human papillomavirus type 71 isolate Qv22945, complete genome Length = 8031 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 ttgtcatcctcatcctcatc 383 |||||||||||||||||||| Sbjct: 977 ttgtcatcctcatcctcatc 958
>gb|AY330620.1| Human papillomavirus type 71 isolate Qv21030, complete genome Length = 8037 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 ttgtcatcctcatcctcatc 383 |||||||||||||||||||| Sbjct: 977 ttgtcatcctcatcctcatc 958
>gb|AC124836.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0092E21, complete sequence Length = 132649 Score = 40.1 bits (20), Expect = 9.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 116 atatactccctccgttcactattataag 143 ||||||||||||||||| ||||||||| Sbjct: 101631 atatactccctccgttccatattataag 101658
>gb|AC171266.22| Medicago truncatula clone mth2-14o4, complete sequence Length = 137052 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 aaaatatactccctccgttc 132 |||||||||||||||||||| Sbjct: 92991 aaaatatactccctccgttc 93010
>gb|AC144737.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0018K15, complete sequence Length = 168519 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 ctaaaatatactccctccgt 130 |||||||||||||||||||| Sbjct: 74653 ctaaaatatactccctccgt 74672
>gb|AC092780.6| Oryza sativa chromosome 3 BAC OSJNBb0079B16 genomic sequence, complete sequence Length = 144383 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 taaaatatactccctccgtt 131 |||||||||||||||||||| Sbjct: 127237 taaaatatactccctccgtt 127218
>ref|XM_757135.1| Ustilago maydis 521 hypothetical protein (UM06081.1) partial mRNA Length = 2616 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 365 tgtcatcctcatcctcatcc 384 |||||||||||||||||||| Sbjct: 294 tgtcatcctcatcctcatcc 313
>emb|CT010515.8| M.truncatula DNA sequence from clone MTH2-146B21 on chromosome 3, complete sequence Length = 130617 Score = 40.1 bits (20), Expect = 9.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 112 taaaatatactccctccgttcactattataag 143 |||||| ||| ||||||| ||||||||||||| Sbjct: 85369 taaaatttacaccctccggtcactattataag 85338
>ref|XM_381612.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG01436.1) partial mRNA Length = 351 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 366 gtcatcctcatcctcatcca 385 |||||||||||||||||||| Sbjct: 138 gtcatcctcatcctcatcca 119
>emb|AL591783.1|SME591783 Sinorhizobium meliloti 1021 complete chromosome; segment 2/12 Length = 306650 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 443 catcaagggccaggaaagcg 462 |||||||||||||||||||| Sbjct: 108780 catcaagggccaggaaagcg 108799
>gb|AC123520.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0034O04, complete sequence Length = 164882 Score = 40.1 bits (20), Expect = 9.2 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 117 tatactccctccgttcactattataagatgtt 148 ||||||||||||||||| | |||||||||||| Sbjct: 129415 tatactccctccgttca-tgttataagatgtt 129445
>gb|AC084384.1| Mus musculus BAC clone RP23-24F24 from 15, complete sequence Length = 208833 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 acatgatgtatctaaaatat 119 |||||||||||||||||||| Sbjct: 57549 acatgatgtatctaaaatat 57568
>emb|CR734198.2|CNS0GTAD Tetraodon nigroviridis full-length cDNA Length = 1201 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 ttgtcatcctcatcctcatc 383 |||||||||||||||||||| Sbjct: 529 ttgtcatcctcatcctcatc 510
>emb|CR733435.2|CNS0GSP6 Tetraodon nigroviridis full-length cDNA Length = 1151 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 ttgtcatcctcatcctcatc 383 |||||||||||||||||||| Sbjct: 467 ttgtcatcctcatcctcatc 448
>emb|CR731241.2|CNS0GR66 Tetraodon nigroviridis full-length cDNA Length = 1145 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 ttgtcatcctcatcctcatc 383 |||||||||||||||||||| Sbjct: 464 ttgtcatcctcatcctcatc 445
>emb|CR731083.2|CNS0GR1S Tetraodon nigroviridis full-length cDNA Length = 1107 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 ttgtcatcctcatcctcatc 383 |||||||||||||||||||| Sbjct: 474 ttgtcatcctcatcctcatc 455
>emb|CR730963.2|CNS0GQYG Tetraodon nigroviridis full-length cDNA Length = 1146 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 ttgtcatcctcatcctcatc 383 |||||||||||||||||||| Sbjct: 465 ttgtcatcctcatcctcatc 446
>emb|CR730702.2|CNS0GQR7 Tetraodon nigroviridis full-length cDNA Length = 1146 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 ttgtcatcctcatcctcatc 383 |||||||||||||||||||| Sbjct: 465 ttgtcatcctcatcctcatc 446
>emb|CR730328.2|CNS0GQGT Tetraodon nigroviridis full-length cDNA Length = 1095 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 ttgtcatcctcatcctcatc 383 |||||||||||||||||||| Sbjct: 462 ttgtcatcctcatcctcatc 443
>emb|CR729658.2|CNS0GPY8 Tetraodon nigroviridis full-length cDNA Length = 1152 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 ttgtcatcctcatcctcatc 383 |||||||||||||||||||| Sbjct: 476 ttgtcatcctcatcctcatc 457
>emb|CR728161.2|CNS0GOSN Tetraodon nigroviridis full-length cDNA Length = 1030 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 ttgtcatcctcatcctcatc 383 |||||||||||||||||||| Sbjct: 469 ttgtcatcctcatcctcatc 450
>emb|CR726492.2|CNS0GNIA Tetraodon nigroviridis full-length cDNA Length = 1142 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 ttgtcatcctcatcctcatc 383 |||||||||||||||||||| Sbjct: 459 ttgtcatcctcatcctcatc 440
>emb|CR726146.2|CNS0GN8O Tetraodon nigroviridis full-length cDNA Length = 1059 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 ttgtcatcctcatcctcatc 383 |||||||||||||||||||| Sbjct: 396 ttgtcatcctcatcctcatc 377
>emb|CR693015.1|CNS0FXOJ Tetraodon nigroviridis full-length cDNA Length = 1152 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 ttgtcatcctcatcctcatc 383 |||||||||||||||||||| Sbjct: 489 ttgtcatcctcatcctcatc 470
>gb|BC011264.1| Homo sapiens DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 (CHL1-like helicase homolog, S. cerevisiae), mRNA (cDNA clone MGC:9335 IMAGE:3451006), complete cds Length = 3907 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 366 gtcatcctcatcctcatcca 385 |||||||||||||||||||| Sbjct: 876 gtcatcctcatcctcatcca 857
>emb|CR685601.2|CNS0FRYL Tetraodon nigroviridis full-length cDNA Length = 1148 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 ttgtcatcctcatcctcatc 383 |||||||||||||||||||| Sbjct: 473 ttgtcatcctcatcctcatc 454
>emb|CR637047.2|CNS0EQIL Tetraodon nigroviridis full-length cDNA Length = 1151 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 ttgtcatcctcatcctcatc 383 |||||||||||||||||||| Sbjct: 472 ttgtcatcctcatcctcatc 453
>gb|AC135102.16| Medicago truncatula clone mth2-8m3, complete sequence Length = 144042 Score = 40.1 bits (20), Expect = 9.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 113 aaaatatactccctccgttcactattataaga 144 |||| |||| ||||||| |||||||||||||| Sbjct: 34032 aaaaaatacaccctccggtcactattataaga 34001
>gb|AC144476.11| Medicago truncatula clone mth2-10a6, complete sequence Length = 119355 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 367 tcatcctcatcctcatccag 386 |||||||||||||||||||| Sbjct: 32694 tcatcctcatcctcatccag 32713
>gb|AC144591.10| Medicago truncatula clone mth2-5f17, complete sequence Length = 128352 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 367 tcatcctcatcctcatccag 386 |||||||||||||||||||| Sbjct: 121003 tcatcctcatcctcatccag 120984
>gb|AC146554.5| Medicago truncatula clone mth2-9l7, complete sequence Length = 135334 Score = 40.1 bits (20), Expect = 9.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 112 taaaatatactccctccgttcactattataag 143 |||||||||| |||||| ||||||||||||| Sbjct: 29723 taaaatatacatcctccggtcactattataag 29692
>gb|AC146789.30| Medicago truncatula clone mth2-71h24, complete sequence Length = 127922 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 367 tcatcctcatcctcatccag 386 |||||||||||||||||||| Sbjct: 125732 tcatcctcatcctcatccag 125751 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 367 tcatcctcatcctcatccag 386 |||||||||||||||||||| Sbjct: 111942 tcatcctcatcctcatccag 111961
>gb|AC121237.19| Medicago truncatula clone mth2-22g11, complete sequence Length = 127731 Score = 40.1 bits (20), Expect = 9.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 116 atatactccctccgttcactattataag 143 |||||| ||||||| ||||||||||||| Sbjct: 40870 atatacaccctccggtcactattataag 40843
>gb|AC148178.35| Medicago truncatula clone mth2-5b21, complete sequence Length = 115185 Score = 40.1 bits (20), Expect = 9.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 112 taaaatatactccctccgttcactattataag 143 |||||||||| | ||||| ||||||||||||| Sbjct: 89192 taaaatatacactctccggtcactattataag 89223
>gb|AC146793.7| Medicago truncatula clone mth2-10p9, complete sequence Length = 115521 Score = 40.1 bits (20), Expect = 9.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 116 atatactccctccgttcactattataag 143 |||||| ||||||| ||||||||||||| Sbjct: 76276 atatacaccctccgatcactattataag 76303
>gb|AC147431.19| Medicago truncatula clone mth2-88g17, complete sequence Length = 145905 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 367 tcatcctcatcctcatccag 386 |||||||||||||||||||| Sbjct: 12575 tcatcctcatcctcatccag 12594
>gb|AC127429.25| Medicago truncatula clone mth2-9o20, complete sequence Length = 130703 Score = 40.1 bits (20), Expect = 9.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 249 atttgtgatcggagggaatatatatata 276 ||||| || ||||||||||||||||||| Sbjct: 64727 atttgagaccggagggaatatatatata 64700
>gb|AC127021.25| Medicago truncatula clone mth2-5e5, complete sequence Length = 139116 Score = 40.1 bits (20), Expect = 9.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 116 atatactccctccgttcactattataag 143 |||||| ||||||| ||||||||||||| Sbjct: 127806 atatacaccctccgatcactattataag 127779
>gb|AC148398.10| Medicago truncatula clone mth2-24c23, complete sequence Length = 123656 Score = 40.1 bits (20), Expect = 9.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 116 atatactccctccgttcactattataag 143 ||||||||||||||||||| ||||||| Sbjct: 40587 atatactccctccgttcacatttataag 40614
>gb|AC148176.11| Medicago truncatula clone mth2-3j15, complete sequence Length = 119267 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 aatatactccctccgttcac 134 |||||||||||||||||||| Sbjct: 59489 aatatactccctccgttcac 59508
>gb|AC137995.31| Medicago truncatula clone mth2-11j1, complete sequence Length = 146749 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 119 tactccctccgttcactattataa 142 ||||||||||| |||||||||||| Sbjct: 8581 tactccctccgatcactattataa 8558
>gb|BC111733.1| Homo sapiens DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 (CHL1-like helicase homolog, S. cerevisiae), mRNA (cDNA clone MGC:133249 IMAGE:40035545), complete cds Length = 3079 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 366 gtcatcctcatcctcatcca 385 |||||||||||||||||||| Sbjct: 911 gtcatcctcatcctcatcca 892
>emb|AL391375.11| Human DNA sequence from clone RP11-375A20 on chromosome X Contains a cytochrome b (MTCYB) pseudogene and two CpG islands, complete sequence Length = 170623 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 atgaccaatgaccttatgaa 35 |||||||||||||||||||| Sbjct: 143376 atgaccaatgaccttatgaa 143395
>gb|AC123517.2| Oryza sativa japonica cultivar-group chromosome 11 clone OSJNBb0074K09, complete sequence Length = 135363 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 taaaatatactccctccgtt 131 |||||||||||||||||||| Sbjct: 17206 taaaatatactccctccgtt 17187
>gb|AC123522.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0051B13, complete sequence Length = 178000 Score = 40.1 bits (20), Expect = 9.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 115 aatatactccctccgttcactattataa 142 ||||||||||||||||| ||||||||| Sbjct: 152813 aatatactccctccgtttcctattataa 152786
>gb|AC123521.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0037P04, complete sequence Length = 139693 Score = 40.1 bits (20), Expect = 9.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 115 aatatactccctccgttcactattataa 142 ||||||||||||||||| ||||||||| Sbjct: 80255 aatatactccctccgtttcctattataa 80228
>emb|AL035425.13|HS24A23 Human DNA sequence from clone RP6-24A23 on chromosome Xq22.2-23 Contains the 3' end of the COL4A5 gene for type IV alpha 5 collagen (Alport syndrome), the IRS4 gene for insulin receptor substrate 4, a novel gene and a CpG island, complete sequence Length = 137100 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 212 gtatgtagttcatattaaaatatc 235 ||||||||||| |||||||||||| Sbjct: 87530 gtatgtagttcttattaaaatatc 87553
>emb|AL731597.3|OSJN00237 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0023J03, complete sequence Length = 175555 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 taaaatatactccctccgtt 131 |||||||||||||||||||| Sbjct: 134537 taaaatatactccctccgtt 134556
>emb|AL731596.3|OSJN00236 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0024J22, complete sequence Length = 174430 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 taaaatatactccctccgtt 131 |||||||||||||||||||| Sbjct: 34754 taaaatatactccctccgtt 34773
>gb|BC050522.1| Homo sapiens DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 (CHL1-like helicase homolog, S. cerevisiae), mRNA (cDNA clone MGC:57502 IMAGE:6471750), complete cds Length = 3774 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 366 gtcatcctcatcctcatcca 385 |||||||||||||||||||| Sbjct: 740 gtcatcctcatcctcatcca 721
>gb|BC047317.1| Homo sapiens DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 (CHL1-like helicase homolog, S. cerevisiae), mRNA (cDNA clone IMAGE:5216292), with apparent retained intron Length = 4084 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 366 gtcatcctcatcctcatcca 385 |||||||||||||||||||| Sbjct: 865 gtcatcctcatcctcatcca 846
>emb|AL445063.1|TACID1 Thermoplasma acidophilum complete genome; segment 1/5 Length = 344000 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 351 gccatattcgcccttgtcat 370 |||||||||||||||||||| Sbjct: 212602 gccatattcgcccttgtcat 212621
>emb|AL049658.1|ATT17F15 Arabidopsis thaliana DNA chromosome 3, BAC clone T17F15 Length = 107950 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 tccaaaacatctaatatttg 253 |||||||||||||||||||| Sbjct: 60486 tccaaaacatctaatatttg 60505
>gb|AF167426.1| Lycopersicon esculentum 1-aminocyclopropane-1-carboxylate synthase (ACS7B) and putative squalene epoxidase (ERG) genes, complete cds Length = 13830 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 atatactccctccgttcact 135 |||||||||||||||||||| Sbjct: 12268 atatactccctccgttcact 12249
>emb|CR354596.12| Zebrafish DNA sequence from clone CH211-117K14 in linkage group 23, complete sequence Length = 172749 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 aaatatccaaaacatctaat 248 |||||||||||||||||||| Sbjct: 83012 aaatatccaaaacatctaat 82993
>gb|BC050069.1| Homo sapiens DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 (CHL1-like helicase homolog, S. cerevisiae), mRNA (cDNA clone MGC:50970 IMAGE:5271949), complete cds Length = 3738 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 366 gtcatcctcatcctcatcca 385 |||||||||||||||||||| Sbjct: 701 gtcatcctcatcctcatcca 682
>emb|CR931731.1| Medicago truncatula chromosome 5 clone mth2-83l19, COMPLETE SEQUENCE Length = 120299 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 119 tactccctccgttcactattataa 142 ||||||||||| |||||||||||| Sbjct: 110755 tactccctccgatcactattataa 110732
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 catcaagggccaggaaagcg 462 |||||||||||||||||||| Sbjct: 338582 catcaagggccaggaaagcg 338563
>gb|AC161107.24| Medicago truncatula clone mth2-192o12, complete sequence Length = 106909 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 120 actccctccgttcactattataag 143 |||||||||| ||||||||||||| Sbjct: 105917 actccctccgatcactattataag 105894
>gb|AC146750.32| Medicago truncatula clone mth2-16o6, complete sequence Length = 114206 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 120 actccctccgttcactattataag 143 |||||||||| ||||||||||||| Sbjct: 91349 actccctccggtcactattataag 91372
>gb|AC137553.45| Medicago truncatula clone mth2-20p12, complete sequence Length = 134249 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 367 tcatcctcatcctcatccag 386 |||||||||||||||||||| Sbjct: 28114 tcatcctcatcctcatccag 28095 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 367 tcatcctcatcctcatccag 386 |||||||||||||||||||| Sbjct: 19359 tcatcctcatcctcatccag 19340
>gb|AC087542.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0073D04, complete sequence Length = 155372 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 taaaatatactccctccgtt 131 |||||||||||||||||||| Sbjct: 89746 taaaatatactccctccgtt 89727
>gb|AC087543.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0068N06, complete sequence Length = 174019 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 ctaaaatatactccctccgt 130 |||||||||||||||||||| Sbjct: 21011 ctaaaatatactccctccgt 21030
>dbj|AK021703.1| Homo sapiens cDNA FLJ11641 fis, clone HEMBA1004354, weakly similar to CHL1 PROTEIN Length = 1825 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 366 gtcatcctcatcctcatcca 385 |||||||||||||||||||| Sbjct: 75 gtcatcctcatcctcatcca 56
>gb|AC006432.15| Homo sapiens 12p13 PAC RPCI11-726G1 (Roswell Park Cancer Institute Human PAC Library) complete sequence Length = 180685 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 366 gtcatcctcatcctcatcca 385 |||||||||||||||||||| Sbjct: 176424 gtcatcctcatcctcatcca 176405
>gb|AC100811.2| Homo sapiens chromosome 8, clone CTD-2532M24, complete sequence Length = 194254 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 420 gcaaacaagccagaacagag 439 |||||||||||||||||||| Sbjct: 185245 gcaaacaagccagaacagag 185226
>dbj|AB108142.1| Phleum pratense DNA, SSR, microsatellite A07-C01 Length = 585 Score = 40.1 bits (20), Expect = 9.2 Identities = 35/40 (87%) Strand = Plus / Plus Query: 166 atgtatatagacgcattttagtgtgtttgttcactcattt 205 |||||| |||||||||||||||| || | | ||||||||| Sbjct: 255 atgtatctagacgcattttagtgagtatatccactcattt 294
>gb|AC016542.11| Homo sapiens chromosome 10 clone RP11-354E23, complete sequence Length = 171480 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 ggaatatatatataactaaa 282 |||||||||||||||||||| Sbjct: 15346 ggaatatatatataactaaa 15327
>ref|NM_057719.3| Drosophila melanogaster Megator CG8274-RA (Mtor), mRNA Length = 7435 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 366 gtcatcctcatcctcatcca 385 |||||||||||||||||||| Sbjct: 5267 gtcatcctcatcctcatcca 5286
>ref|XM_927232.1| PREDICTED: Homo sapiens DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 12 (CHL1-like helicase homolog, S. cerevisiae), transcript variant 2 (DDX12), mRNA Length = 5094 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 366 gtcatcctcatcctcatcca 385 |||||||||||||||||||| Sbjct: 1400 gtcatcctcatcctcatcca 1381
>ref|XM_931954.1| PREDICTED: Homo sapiens DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 12 (CHL1-like helicase homolog, S. cerevisiae), transcript variant 26 (DDX12), mRNA Length = 4944 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 366 gtcatcctcatcctcatcca 385 |||||||||||||||||||| Sbjct: 1400 gtcatcctcatcctcatcca 1381
>ref|XM_931947.1| PREDICTED: Homo sapiens DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 12 (CHL1-like helicase homolog, S. cerevisiae), transcript variant 25 (DDX12), mRNA Length = 4849 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 366 gtcatcctcatcctcatcca 385 |||||||||||||||||||| Sbjct: 1155 gtcatcctcatcctcatcca 1136
>ref|XM_931941.1| PREDICTED: Homo sapiens DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 12 (CHL1-like helicase homolog, S. cerevisiae), transcript variant 24 (DDX12), mRNA Length = 4445 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 366 gtcatcctcatcctcatcca 385 |||||||||||||||||||| Sbjct: 733 gtcatcctcatcctcatcca 714
>ref|XM_931933.1| PREDICTED: Homo sapiens DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 12 (CHL1-like helicase homolog, S. cerevisiae), transcript variant 23 (DDX12), mRNA Length = 4463 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 366 gtcatcctcatcctcatcca 385 |||||||||||||||||||| Sbjct: 751 gtcatcctcatcctcatcca 732
>ref|XM_931927.1| PREDICTED: Homo sapiens DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 12 (CHL1-like helicase homolog, S. cerevisiae), transcript variant 22 (DDX12), mRNA Length = 4776 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 366 gtcatcctcatcctcatcca 385 |||||||||||||||||||| Sbjct: 1064 gtcatcctcatcctcatcca 1045
>ref|XM_495908.2| PREDICTED: Homo sapiens DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 12 (CHL1-like helicase homolog, S. cerevisiae), transcript variant 1 (DDX12), mRNA Length = 5021 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 366 gtcatcctcatcctcatcca 385 |||||||||||||||||||| Sbjct: 1327 gtcatcctcatcctcatcca 1308
>ref|XM_931918.1| PREDICTED: Homo sapiens DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 12 (CHL1-like helicase homolog, S. cerevisiae), transcript variant 21 (DDX12), mRNA Length = 4437 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 366 gtcatcctcatcctcatcca 385 |||||||||||||||||||| Sbjct: 492 gtcatcctcatcctcatcca 473
>ref|XM_931915.1| PREDICTED: Homo sapiens DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 12 (CHL1-like helicase homolog, S. cerevisiae), transcript variant 20 (DDX12), mRNA Length = 5380 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 366 gtcatcctcatcctcatcca 385 |||||||||||||||||||| Sbjct: 1588 gtcatcctcatcctcatcca 1569
>ref|XM_931895.1| PREDICTED: Homo sapiens DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 12 (CHL1-like helicase homolog, S. cerevisiae), transcript variant 17 (DDX12), mRNA Length = 4675 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 366 gtcatcctcatcctcatcca 385 |||||||||||||||||||| Sbjct: 1400 gtcatcctcatcctcatcca 1381
>ref|XM_931891.1| PREDICTED: Homo sapiens DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 12 (CHL1-like helicase homolog, S. cerevisiae), transcript variant 16 (DDX12), mRNA Length = 6525 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 366 gtcatcctcatcctcatcca 385 |||||||||||||||||||| Sbjct: 1400 gtcatcctcatcctcatcca 1381
>ref|XM_931887.1| PREDICTED: Homo sapiens DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 12 (CHL1-like helicase homolog, S. cerevisiae), transcript variant 15 (DDX12), mRNA Length = 5251 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 366 gtcatcctcatcctcatcca 385 |||||||||||||||||||| Sbjct: 1400 gtcatcctcatcctcatcca 1381
>ref|XM_931883.1| PREDICTED: Homo sapiens DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 12 (CHL1-like helicase homolog, S. cerevisiae), transcript variant 14 (DDX12), mRNA Length = 3222 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 366 gtcatcctcatcctcatcca 385 |||||||||||||||||||| Sbjct: 1400 gtcatcctcatcctcatcca 1381
>ref|XM_931876.1| PREDICTED: Homo sapiens DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 12 (CHL1-like helicase homolog, S. cerevisiae), transcript variant 13 (DDX12), mRNA Length = 4249 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 366 gtcatcctcatcctcatcca 385 |||||||||||||||||||| Sbjct: 1400 gtcatcctcatcctcatcca 1381
>ref|XM_931872.1| PREDICTED: Homo sapiens DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 12 (CHL1-like helicase homolog, S. cerevisiae), transcript variant 12 (DDX12), mRNA Length = 2060 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 366 gtcatcctcatcctcatcca 385 |||||||||||||||||||| Sbjct: 1400 gtcatcctcatcctcatcca 1381
>ref|XM_931867.1| PREDICTED: Homo sapiens DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 12 (CHL1-like helicase homolog, S. cerevisiae), transcript variant 11 (DDX12), mRNA Length = 1260 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 366 gtcatcctcatcctcatcca 385 |||||||||||||||||||| Sbjct: 1155 gtcatcctcatcctcatcca 1136
>ref|XM_931845.1| PREDICTED: Homo sapiens DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 12 (CHL1-like helicase homolog, S. cerevisiae), transcript variant 7 (DDX12), mRNA Length = 4940 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 366 gtcatcctcatcctcatcca 385 |||||||||||||||||||| Sbjct: 1246 gtcatcctcatcctcatcca 1227
>ref|XM_931839.1| PREDICTED: Homo sapiens DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 12 (CHL1-like helicase homolog, S. cerevisiae), transcript variant 6 (DDX12), mRNA Length = 1571 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 366 gtcatcctcatcctcatcca 385 |||||||||||||||||||| Sbjct: 492 gtcatcctcatcctcatcca 473
>ref|XM_931836.1| PREDICTED: Homo sapiens DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 12 (CHL1-like helicase homolog, S. cerevisiae), transcript variant 5 (DDX12), mRNA Length = 611 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 366 gtcatcctcatcctcatcca 385 |||||||||||||||||||| Sbjct: 506 gtcatcctcatcctcatcca 487
>ref|XM_931833.1| PREDICTED: Homo sapiens DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 12 (CHL1-like helicase homolog, S. cerevisiae), transcript variant 4 (DDX12), mRNA Length = 2502 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 366 gtcatcctcatcctcatcca 385 |||||||||||||||||||| Sbjct: 1400 gtcatcctcatcctcatcca 1381
>ref|XM_944856.1| PREDICTED: Homo sapiens similar to DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 isoform 1, transcript variant 6 (LOC650933), mRNA Length = 2206 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 366 gtcatcctcatcctcatcca 385 |||||||||||||||||||| Sbjct: 1400 gtcatcctcatcctcatcca 1381
>ref|XM_944852.1| PREDICTED: Homo sapiens similar to DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 isoform 1, transcript variant 5 (LOC650933), mRNA Length = 1571 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 366 gtcatcctcatcctcatcca 385 |||||||||||||||||||| Sbjct: 492 gtcatcctcatcctcatcca 473 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 15,796,962 Number of Sequences: 3902068 Number of extensions: 15796962 Number of successful extensions: 168321 Number of sequences better than 10.0: 312 Number of HSP's better than 10.0 without gapping: 333 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 162672 Number of HSP's gapped (non-prelim): 5649 length of query: 672 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 649 effective length of database: 17,143,297,704 effective search space: 11126000209896 effective search space used: 11126000209896 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)