>SRCA_MOUSE (Q7TQ48) Sarcalumenin precursor|
          Length = 910

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = +1

Query: 397 APGANGLRLHYHGAXTLTVLDQAPXGAXASANSR 498
           APG   L LHY        L+Q P GA ++AN +
Sbjct: 60  APGDKNLLLHYPDGREAESLEQTPAGAPSTANGQ 93

>IF2_NOCFA (Q5YSC6) Translation initiation factor IF-2|
          Length = 969

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 17/40 (42%), Positives = 19/40 (47%)
 Frame = +3

Query: 405 SQRPPXALPRRGYADSPRPGSXRSGGISKQPVPGMATPXV 524
           +QRP    PR G     RPG+   GG    P PG  TP V
Sbjct: 140 AQRPTPGGPRPGQQQQ-RPGAPAQGGPRPGPKPGPKTPRV 178

>IF2_CORJK (Q4JV51) Translation initiation factor IF-2|
          Length = 922

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 22/57 (38%), Positives = 23/57 (40%), Gaps = 6/57 (10%)
 Frame = +3

Query: 360 RPAGLHPXVMG*GTRSQRP---PXALPRRGYA---DSPRPGSXRSGGISKQPVPGMA 512
           +P G  P V      S  P   P   PR G A   D PRPGS   G     P PG A
Sbjct: 163 KPGGRAPRVANNPFSSGAPAERPAPRPRGGQAGPGDMPRPGSRPGGAKKAGPKPGGA 219

>TAF4_HUMAN (O00268) Transcription initiation factor TFIID subunit 4|
           (Transcription initiation factor TFIID 135 kDa subunit)
           (TAF(II)135) (TAFII-135) (TAFII135) (TAFII-130)
           (TAFII130)
          Length = 1085

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 21/61 (34%), Positives = 25/61 (40%), Gaps = 3/61 (4%)
 Frame = +3

Query: 354 LGRPAGLHPXVMG*GTRSQRPPXALPR---RGYADSPRPGSXRSGGISKQPVPGMATPXV 524
           L RP G HP        +  PP A       G A +P P +    G+S QP PG A    
Sbjct: 280 LARPPG-HPAGPPTAAPAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPGAAAAAP 338

Query: 525 A 527
           A
Sbjct: 339 A 339

>ANX11_BOVIN (P27214) Annexin A11 (Annexin XI) (Calcyclin-associated annexin-50)|
           (CAP-50)
          Length = 503

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 20/55 (36%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
 Frame = +3

Query: 357 GRPAGLHPXVMG*GTRSQRPPXALPRRGYADSPRPGSXRSGGI-SKQPVPGMATP 518
           G P G +P V   G   Q PP   P   Y   P PG   + G+ S  P PG   P
Sbjct: 75  GAPGGGYPPVPP-GGFGQPPPAQQPVPSYGMYPPPGGNPTSGMPSYPPYPGAPVP 128


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,493,800
Number of Sequences: 219361
Number of extensions: 1233814
Number of successful extensions: 2987
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2984
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4545742239
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)