ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal4l05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC129772.3| Mus musculus BAC clone RP24-491D10 from chromosom... 42 0.33
2gb|DQ422949.1| Bos taurus BTA02 scaffold1676_5172 genomic sequen... 42 0.33
3gb|AC152983.2| Mus musculus 10 BAC RP23-17L11 (Roswell Park Canc... 42 0.33
4emb|AJ426040.1|TRU426040 Takifugu rubripes vader gene, cetn gene... 40 1.3
5emb|AJ628861.1| Sphingomonas herbicidovorans cadR gene (partial)... 40 1.3
6gb|AC149395.2| Phakopsora pachyrhizi clone JGIAFNA-61H11, comple... 40 1.3
7gb|AY763504.1| Lytechinus variegatus co-repressor protein grouch... 40 1.3
8gb|AC161465.3| Gallus gallus BAC clone CH261-97D4 from chromosom... 40 1.3
9ref|XM_510340.1| PREDICTED: Pan troglodytes LOC453368 (LOC453368... 38 5.1
10ref|NM_001004147.1| Mus musculus expressed sequence AI595406 (AI... 38 5.1
11gb|BC052068.1| Mus musculus expressed sequence AI595406, mRNA (c... 38 5.1
12gb|AF450245.1| Mus musculus clone BAC199M11, complete sequence 38 5.1
13gb|AY358467.1| Homo sapiens clone DNA59218 CDAN1 (UNQ664) mRNA, ... 38 5.1
14gb|BC052568.1| Homo sapiens congenital dyserythropoietic anemia,... 38 5.1
15gb|BC001092.2| Homo sapiens congenital dyserythropoietic anemia,... 38 5.1
16emb|Z84814.1|HS172K2 Human DNA sequence from clone RP1-172K2 on ... 38 5.1
17emb|AL935032.13| Human DNA sequence from clone DAQB-184K4 on chr... 38 5.1
18emb|BX255934.7| Human DNA sequence from clone RP11-52F5 on chrom... 38 5.1
19emb|BX255945.6| Human DNA sequence from clone DASS-380D18 on chr... 38 5.1
20emb|AL670296.7| Human DNA sequence from clone XXbac-213L12 on ch... 38 5.1
21emb|AL662796.6| Human DNA sequence from clone XXbac-290C9 on chr... 38 5.1
22emb|AL592424.13| Human DNA sequence from clone RP11-68I18 on chr... 38 5.1
23gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 38 5.1
24emb|AL031785.1|HS478D8 Human DNA sequence from clone RP3-478D8 o... 38 5.1
25emb|AL731606.2|OSJN00249 Oryza sativa genomic DNA, chromosome 4,... 38 5.1
26emb|AL596084.13| Mouse DNA sequence from clone RP23-196B5 on chr... 38 5.1
27emb|AL161498.2|ATCHRIV10 Arabidopsis thaliana DNA chromosome 4, ... 38 5.1
28emb|CR753634.3| Human DNA sequence from clone DADB-70I23 on chro... 38 5.1
29emb|CR759773.4| Human DNA sequence from clone DAMC-185H11 on chr... 38 5.1
30gb|AC012630.7| Homo sapiens chromosome 5 clone CTD-2158F3, compl... 38 5.1
31dbj|AK140117.1| Mus musculus adult male corpora quadrigemina cDN... 38 5.1
32ref|NM_138477.2| Homo sapiens congenital dyserythropoietic anemi... 38 5.1
33gb|AC090510.4| Homo sapiens chromosome 15 clone CTD-2036P10 map ... 38 5.1
34emb|BX548241.6| Zebrafish DNA sequence from clone DKEY-23F5 in l... 38 5.1
35emb|BX908732.13| Human DNA sequence from clone DAMA-178J18 on ch... 38 5.1
36gb|BC008334.1|BC008334 Homo sapiens, clone IMAGE:3506174, mRNA, ... 38 5.1
37gb|BC008333.1|BC008333 Homo sapiens, clone IMAGE:3506145, mRNA, ... 38 5.1
38gb|AC148706.1| Macaca mulatta Major Histocompatibility Complex B... 38 5.1
39gb|AC148693.1| Macaca mulatta Major Histocompatibility Complex B... 38 5.1
40dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 38 5.1
41gb|AF525398.1| Homo sapiens codanin I mRNA, partial cds 38 5.1
42dbj|AK102641.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 5.1
43gb|AC157500.1| Oryza sativa (japonica cultivar-group) BAC clone ... 38 5.1
44gb|AC159134.3| Pan troglodytes BAC clone CH251-80P13 from chromo... 38 5.1
45emb|AL935293.11| Zebrafish DNA sequence from clone CH211-251D10 ... 38 5.1
46gb|AF077409.1|T24M8 Arabidopsis thaliana BAC T24M8 38 5.1
47emb|AL731593.2|OSJN00235 Oryza sativa genomic DNA, chromosome 4,... 38 5.1
48gb|AC174439.1| Homo sapiens chromosome 6 clone WI2-1528P12, comp... 38 5.1
49gb|BC066640.1| Homo sapiens congenital dyserythropoietic anemia,... 38 5.1 
>gb|AC129772.3| Mus musculus BAC clone RP24-491D10 from chromosome 10, complete sequence
          Length = 160317

 Score = 42.1 bits (21), Expect = 0.33
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 25     gacagcaagtagcagcagcag 45
              |||||||||||||||||||||
Sbjct: 156654 gacagcaagtagcagcagcag 156674
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>gb|DQ422949.1| Bos taurus BTA02 scaffold1676_5172 genomic sequence contig containing
             highly polymorphic single nucleotide sites
          Length = 13240

 Score = 42.1 bits (21), Expect = 0.33
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 32    agtagcagcagcagagcagcc 52
             |||||||||||||||||||||
Sbjct: 10769 agtagcagcagcagagcagcc 10749
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>gb|AC152983.2| Mus musculus 10 BAC RP23-17L11 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 224120

 Score = 42.1 bits (21), Expect = 0.33
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 25    gacagcaagtagcagcagcag 45
             |||||||||||||||||||||
Sbjct: 45308 gacagcaagtagcagcagcag 45328
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>emb|AJ426040.1|TRU426040 Takifugu rubripes vader gene, cetn gene, fgf2 gene, gfg gene and spaf
             gene, cosmid 196n09
          Length = 29053

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 32    agtagcagcagcagagcagc 51
             ||||||||||||||||||||
Sbjct: 10170 agtagcagcagcagagcagc 10151
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>emb|AJ628861.1| Sphingomonas herbicidovorans cadR gene (partial), ORF2 and tfdB gene
          Length = 4522

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 35   agcagcagcagagcagccgc 54
            ||||||||||||||||||||
Sbjct: 1483 agcagcagcagagcagccgc 1464
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>gb|AC149395.2| Phakopsora pachyrhizi clone JGIAFNA-61H11, complete sequence
          Length = 30962

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 36    gcagcagcagagcagccgcg 55
             ||||||||||||||||||||
Sbjct: 22166 gcagcagcagagcagccgcg 22185
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>gb|AY763504.1| Lytechinus variegatus co-repressor protein groucho (groucho) mRNA,
           complete cds
          Length = 2241

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 26  acagcaagtagcagcagcag 45
           ||||||||||||||||||||
Sbjct: 300 acagcaagtagcagcagcag 319
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>gb|AC161465.3| Gallus gallus BAC clone CH261-97D4 from chromosome ul, complete
            sequence
          Length = 213337

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 26   acagcaagtagcagcagcag 45
            ||||||||||||||||||||
Sbjct: 7213 acagcaagtagcagcagcag 7232
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>ref|XM_510340.1| PREDICTED: Pan troglodytes LOC453368 (LOC453368), mRNA
          Length = 7749

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 25   gacagcaagtagcagcagc 43
            |||||||||||||||||||
Sbjct: 6606 gacagcaagtagcagcagc 6588
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>ref|NM_001004147.1| Mus musculus expressed sequence AI595406 (AI595406), mRNA
          Length = 1213

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 28   agcaagtagcagcagcaga 46
            |||||||||||||||||||
Sbjct: 1077 agcaagtagcagcagcaga 1095
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>gb|BC052068.1| Mus musculus expressed sequence AI595406, mRNA (cDNA clone MGC:62475
            IMAGE:5710336), complete cds
          Length = 1213

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 28   agcaagtagcagcagcaga 46
            |||||||||||||||||||
Sbjct: 1077 agcaagtagcagcagcaga 1095
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>gb|AF450245.1| Mus musculus clone BAC199M11, complete sequence
          Length = 124254

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 38    agcagcagagcagccgcgt 56
             |||||||||||||||||||
Sbjct: 41299 agcagcagagcagccgcgt 41317
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>gb|AY358467.1| Homo sapiens clone DNA59218 CDAN1 (UNQ664) mRNA, complete cds
          Length = 3580

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 25  gacagcaagtagcagcagc 43
           |||||||||||||||||||
Sbjct: 242 gacagcaagtagcagcagc 224
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>gb|BC052568.1| Homo sapiens congenital dyserythropoietic anemia, type I, mRNA (cDNA
            clone IMAGE:6645406), partial cds
          Length = 4354

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 25   gacagcaagtagcagcagc 43
            |||||||||||||||||||
Sbjct: 2249 gacagcaagtagcagcagc 2231
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>gb|BC001092.2| Homo sapiens congenital dyserythropoietic anemia, type I, mRNA
           (cDNA clone IMAGE:3506144), partial cds
          Length = 3212

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 25  gacagcaagtagcagcagc 43
           |||||||||||||||||||
Sbjct: 816 gacagcaagtagcagcagc 798
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>emb|Z84814.1|HS172K2 Human DNA sequence from clone RP1-172K2 on chromosome 6p21.1-21.3
              Contains the HLA-DRB3, HLA-DRB9 and HLA-DRA genes for major
              histocompatibility complex class II DR beta 3*01012, beta 9
              (pseudogene) and alpha and the 5' end of the BTNL2 gene
              encoding MHC class II associated butyrophilin-like 2.
              Contains a CpG island, ESTs, STSs and GSSs, complete
              sequence
          Length = 131234

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 25     gacagcaagtagcagcagc 43
              |||||||||||||||||||
Sbjct: 107775 gacagcaagtagcagcagc 107757
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>emb|AL935032.13| Human DNA sequence from clone DAQB-184K4 on chromosome 6 Contains the
             HCG23 gene for HLA complex group 23, 2 fragments of BTNL2
             gene for butyrophilin-like 2 (MHC class II associated),
             the HLA-DRA gene for the major histocompatibility complex,
             class II, DR alpha (HLA-DRA1), the 3' end of the
             pseudogene HLA-DRB9 for major histocompatibility complex,
             class II, DR beta 9 and one CpG island, complete sequence
          Length = 95263

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 25    gacagcaagtagcagcagc 43
             |||||||||||||||||||
Sbjct: 51388 gacagcaagtagcagcagc 51406
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>emb|BX255934.7| Human DNA sequence from clone RP11-52F5 on chromosome 6, complete
             sequence
          Length = 92440

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 35    agcagcagcagagcagccg 53
             |||||||||||||||||||
Sbjct: 26708 agcagcagcagagcagccg 26726
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>emb|BX255945.6| Human DNA sequence from clone DASS-380D18 on chromosome 6, complete
             sequence
          Length = 96060

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 25    gacagcaagtagcagcagc 43
             |||||||||||||||||||
Sbjct: 85217 gacagcaagtagcagcagc 85235
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>emb|AL670296.7| Human DNA sequence from clone XXbac-213L12 on chromosome 6 contains the
              5' end of the gene for chromosome 6 open reading frame 10,
              a putative novel transcript, the BTNL2 gene for
              butyrophilin-like 2, the HLA-DRA gene for major
              histocompatibility complex, class II, DR alpha, the major
              histocompatibility complex, class II, DR beta 9 pseudogene
              and one CpG island, complete sequence
          Length = 160623

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 25     gacagcaagtagcagcagc 43
              |||||||||||||||||||
Sbjct: 102163 gacagcaagtagcagcagc 102181
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>emb|AL662796.6| Human DNA sequence from clone XXbac-290C9 on chromosome 6 Contains the 5'
              end of the C6orf10 gene for chromosome 6 open reading frame
              10, the HCG23 gene for HLA complex group 23, 2 fragments of
              BTNL2 gene for butyrophilin-like 2 (MHC class II
              associated), the HLA-DRA gene for the major
              histocompatibility complex, class II, DR alpha (HLA-DRA1)
              and one CpG island, complete sequence
          Length = 130102

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 25     gacagcaagtagcagcagc 43
              |||||||||||||||||||
Sbjct: 102737 gacagcaagtagcagcagc 102755
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>emb|AL592424.13| Human DNA sequence from clone RP11-68I18 on chromosome 1 Contains the
             3' end of a novel gene (MGC29891), a ribosomal protein S29
             (RPS29) pseudogene, the SEMA6C gene for sema domain
             transmembrane domain (TM) and cytoplasmic domain
             (semaphorin) 6C, gene FLJ23467, a novel gene, the SCNM1
             gene for sodium channel modifier 1, the TMOD4 gene for
             tropomodulin 4 (muscle), the TCFL1 gene for transcription
             factor-like 1, the PIP5K1A gene for
             phosphatidylinositol-4-phosphate 5-kinase type I alpha,
             the 5' end of the PSMD4 gene for proteasome (prosome,
             macropain) 26S subunit non-ATPase 4 and four CpG islands,
             complete sequence
          Length = 159148

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 33    gtagcagcagcagagcagc 51
             |||||||||||||||||||
Sbjct: 28440 gtagcagcagcagagcagc 28422
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 42      gcagagcagccgcgtcggg 60
               |||||||||||||||||||
Sbjct: 2862999 gcagagcagccgcgtcggg 2863017
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>emb|AL031785.1|HS478D8 Human DNA sequence from clone RP3-478D8 on chromosome 6p24, complete
              sequence
          Length = 152553

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 35     agcagcagcagagcagccg 53
              |||||||||||||||||||
Sbjct: 113527 agcagcagcagagcagccg 113509
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>emb|AL731606.2|OSJN00249 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0058G03,
             complete sequence
          Length = 46422

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 23    gcgacagcaagtagcagcagcag 45
             ||||||||||| |||||||||||
Sbjct: 31573 gcgacagcaagcagcagcagcag 31551
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>emb|AL596084.13| Mouse DNA sequence from clone RP23-196B5 on chromosome 11 Contains the
             Pank3 gene for pantothenate kinase 3, a pseudogene similar
             to part of ribosomal protein L7a (Rpl7a), a pseudogene
             similar to part of fibrillarin (Fbl), the Rars gene for
             arginyl-tRNA synthetase, the 3' end of the gene for a
             novel protein similar to human KIBRA and two CpG islands,
             complete sequence
          Length = 181103

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 28    agcaagtagcagcagcaga 46
             |||||||||||||||||||
Sbjct: 42699 agcaagtagcagcagcaga 42681
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>emb|AL161498.2|ATCHRIV10 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 10
          Length = 196296

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 30     caagtagcagcagcagagcagcc 52
              |||||||||||||||||| ||||
Sbjct: 166536 caagtagcagcagcagagaagcc 166514
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>emb|CR753634.3| Human DNA sequence from clone DADB-70I23 on chromosome 6, complete
             sequence
          Length = 78472

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 25    gacagcaagtagcagcagc 43
             |||||||||||||||||||
Sbjct: 25158 gacagcaagtagcagcagc 25176
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>emb|CR759773.4| Human DNA sequence from clone DAMC-185H11 on chromosome 6, complete
              sequence
          Length = 117222

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 25     gacagcaagtagcagcagc 43
              |||||||||||||||||||
Sbjct: 114625 gacagcaagtagcagcagc 114643
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>gb|AC012630.7| Homo sapiens chromosome 5 clone CTD-2158F3, complete sequence
          Length = 70065

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 33    gtagcagcagcagagcagc 51
             |||||||||||||||||||
Sbjct: 18395 gtagcagcagcagagcagc 18377
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>dbj|AK140117.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length
            enriched library, clone:B230304L01 product:hypothetical
            Fibrillarin containing protein, full insert sequence
          Length = 1209

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 28   agcaagtagcagcagcaga 46
            |||||||||||||||||||
Sbjct: 1093 agcaagtagcagcagcaga 1111
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>ref|NM_138477.2| Homo sapiens congenital dyserythropoietic anemia, type I (CDAN1),
            mRNA
          Length = 4757

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 25   gacagcaagtagcagcagc 43
            |||||||||||||||||||
Sbjct: 2361 gacagcaagtagcagcagc 2343
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>gb|AC090510.4| Homo sapiens chromosome 15 clone CTD-2036P10 map 15q21.1, complete
             sequence
          Length = 148295

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 25    gacagcaagtagcagcagc 43
             |||||||||||||||||||
Sbjct: 91164 gacagcaagtagcagcagc 91182
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>emb|BX548241.6| Zebrafish DNA sequence from clone DKEY-23F5 in linkage group 10,
             complete sequence
          Length = 92780

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 26    acagcaagtagcagcagca 44
             |||||||||||||||||||
Sbjct: 39115 acagcaagtagcagcagca 39097
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>emb|BX908732.13| Human DNA sequence from clone DAMA-178J18 on chromosome 6, complete
             sequence
          Length = 101860

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 25    gacagcaagtagcagcagc 43
             |||||||||||||||||||
Sbjct: 95714 gacagcaagtagcagcagc 95732
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>gb|BC008334.1|BC008334 Homo sapiens, clone IMAGE:3506174, mRNA, partial cds
          Length = 3212

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 25  gacagcaagtagcagcagc 43
           |||||||||||||||||||
Sbjct: 816 gacagcaagtagcagcagc 798
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>gb|BC008333.1|BC008333 Homo sapiens, clone IMAGE:3506145, mRNA, partial cds
          Length = 3212

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 25  gacagcaagtagcagcagc 43
           |||||||||||||||||||
Sbjct: 816 gacagcaagtagcagcagc 798
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>gb|AC148706.1| Macaca mulatta Major Histocompatibility Complex BAC MMU370O02, complete
             sequence
          Length = 181896

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 25    gacagcaagtagcagcagc 43
             |||||||||||||||||||
Sbjct: 87979 gacagcaagtagcagcagc 87997
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>gb|AC148693.1| Macaca mulatta Major Histocompatibility Complex BAC MMU240D05, complete
             sequence
          Length = 161692

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 25    gacagcaagtagcagcagc 43
             |||||||||||||||||||
Sbjct: 97656 gacagcaagtagcagcagc 97674
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                       
Query: 23       gcgacagcaagtagcagcagcag 45
                ||||||||||| |||||||||||
Sbjct: 22133092 gcgacagcaagcagcagcagcag 22133070
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>gb|AF525398.1| Homo sapiens codanin I mRNA, partial cds
          Length = 4725

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 25   gacagcaagtagcagcagc 43
            |||||||||||||||||||
Sbjct: 2358 gacagcaagtagcagcagc 2340
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>dbj|AK102641.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033100F02, full
           insert sequence
          Length = 1302

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 23  gcgacagcaagtagcagcagcag 45
           ||||||||||| |||||||||||
Sbjct: 145 gcgacagcaagcagcagcagcag 123
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>gb|AC157500.1| Oryza sativa (japonica cultivar-group) BAC clone OSJNBb0056O04, from
             chromosome 4, complete sequence
          Length = 90825

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 23    gcgacagcaagtagcagcagcag 45
             ||||||||||| |||||||||||
Sbjct: 57598 gcgacagcaagcagcagcagcag 57576
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>gb|AC159134.3| Pan troglodytes BAC clone CH251-80P13 from chromosome unknown, complete
              sequence
          Length = 182033

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 33     gtagcagcagcagagcagc 51
              |||||||||||||||||||
Sbjct: 170689 gtagcagcagcagagcagc 170707
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>emb|AL935293.11| Zebrafish DNA sequence from clone CH211-251D10 in linkage group 10,
              complete sequence
          Length = 188908

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 26     acagcaagtagcagcagca 44
              |||||||||||||||||||
Sbjct: 109572 acagcaagtagcagcagca 109554
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>gb|AF077409.1|T24M8 Arabidopsis thaliana BAC T24M8
          Length = 68251

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 30    caagtagcagcagcagagcagcc 52
             |||||||||||||||||| ||||
Sbjct: 53547 caagtagcagcagcagagaagcc 53569
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>emb|AL731593.2|OSJN00235 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027P08,
            complete sequence
          Length = 118959

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 23   gcgacagcaagtagcagcagcag 45
            ||||||||||| |||||||||||
Sbjct: 2953 gcgacagcaagcagcagcagcag 2931
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>gb|AC174439.1| Homo sapiens chromosome 6 clone WI2-1528P12, complete sequence
          Length = 42050

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 35    agcagcagcagagcagccg 53
             |||||||||||||||||||
Sbjct: 40113 agcagcagcagagcagccg 40131
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>gb|BC066640.1| Homo sapiens congenital dyserythropoietic anemia, type I, mRNA (cDNA
            clone MGC:71365 IMAGE:6577335), complete cds
          Length = 4350

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 25   gacagcaagtagcagcagc 43
            |||||||||||||||||||
Sbjct: 2249 gacagcaagtagcagcagc 2231


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 942,556
Number of Sequences: 3902068
Number of extensions: 942556
Number of successful extensions: 59640
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 59485
Number of HSP's gapped (non-prelim): 155
length of query: 112
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 91
effective length of database: 17,151,101,840
effective search space: 1560750267440
effective search space used: 1560750267440
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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