ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal4l02 |
|---|---|
| Clone Library Name | barley_pub |
>CBP1_ORYSA (P37890) Serine carboxypeptidase 1 precursor (EC 3.4.16.5) (Serine| carboxypeptidase I) (Carboxypeptidase C) Length = 510 Score = 52.8 bits (125), Expect(2) = 1e-09 Identities = 20/37 (54%), Positives = 27/37 (72%) Frame = -2 Query: 463 FTLTYSNNMTFATIKGGGHTAPEYEPERCFAMFSRWI 353 +T Y + +TFATIKG GHT PEY+P+ A +SRW+ Sbjct: 469 YTQGYEHGLTFATIKGAGHTVPEYKPQESLAFYSRWL 505 Score = 28.9 bits (63), Expect(2) = 1e-09 Identities = 10/17 (58%), Positives = 12/17 (70%) Frame = -1 Query: 599 VAHHWRAWHLHGQSAGY 549 V WR WHL+GQ +GY Sbjct: 453 VIDSWRPWHLNGQVSGY 469
>CBP1_HORVU (P07519) Serine carboxypeptidase 1 precursor (EC 3.4.16.5) (Serine| carboxypeptidase I) (Carboxypeptidase C) (CP-MI) [Contains: Serine carboxypeptidase 1 chain A (Serine carboxypeptidase I chain A); Serine carboxypeptidase 1 chain B (Serine car Length = 499 Score = 55.1 bits (131), Expect(2) = 2e-08 Identities = 21/37 (56%), Positives = 28/37 (75%) Frame = -2 Query: 463 FTLTYSNNMTFATIKGGGHTAPEYEPERCFAMFSRWI 353 +T Y + +TFATIKG GHT PEY+P+ FA +SRW+ Sbjct: 458 YTEGYEHGLTFATIKGAGHTVPEYKPQEAFAFYSRWL 494 Score = 23.1 bits (48), Expect(2) = 2e-08 Identities = 8/17 (47%), Positives = 10/17 (58%) Frame = -1 Query: 599 VAHHWRAWHLHGQSAGY 549 V WR W +GQ +GY Sbjct: 442 VVDSWRPWITNGQVSGY 458
>PPGB_MOUSE (P16675) Lysosomal protective protein precursor (EC 3.4.16.5)| (Cathepsin A) (Carboxypeptidase C) (Protective protein for beta-galactosidase) [Contains: Lysosomal protective protein 32 kDa chain; Lysosomal protective protein 20 kDa chain] Length = 474 Score = 39.7 bits (91), Expect = 0.007 Identities = 16/35 (45%), Positives = 24/35 (68%) Frame = -2 Query: 445 NNMTFATIKGGGHTAPEYEPERCFAMFSRWILEKP 341 +++TF TIKG GH P +P F MFSR++ ++P Sbjct: 439 SHITFLTIKGAGHMVPTDKPRAAFTMFSRFLNKEP 473
>BRS1_ARATH (Q9M099) Serine carboxypeptidase 2 precursor (EC 3.4.16.6) (Serine| carboxypeptidase II) (Carboxypeptidase D) (Bri1 suppressor 1) [Contains: Serine carboxypeptidase 2 chain A (Serine carboxypeptidase II chain A); Serine carboxypeptidase 2 chain Length = 465 Score = 37.0 bits (84), Expect = 0.044 Identities = 14/34 (41%), Positives = 22/34 (64%) Frame = -2 Query: 439 MTFATIKGGGHTAPEYEPERCFAMFSRWILEKPL 338 +TFAT++G GH P +EP+R +F ++ K L Sbjct: 428 LTFATVRGAGHEVPLFEPKRALILFRSFLAGKEL 461
>PPGB_HUMAN (P10619) Lysosomal protective protein precursor (EC 3.4.16.5)| (Cathepsin A) (Carboxypeptidase C) (Protective protein for beta-galactosidase) [Contains: Lysosomal protective protein 32 kDa chain; Lysosomal protective protein 20 kDa chain] Length = 480 Score = 36.6 bits (83), Expect = 0.057 Identities = 15/35 (42%), Positives = 23/35 (65%) Frame = -2 Query: 445 NNMTFATIKGGGHTAPEYEPERCFAMFSRWILEKP 341 +++ F TIKG GH P +P F MFSR++ ++P Sbjct: 445 SHIAFLTIKGAGHMVPTDKPLAAFTMFSRFLNKQP 479
>CBP23_HORVU (P52711) Serine carboxypeptidase II-3 precursor (EC 3.4.16.6)| (CP-MII.3) [Contains: Serine carboxypeptidase II-3 chain A; Serine carboxypeptidase II-3 chain B] Length = 516 Score = 35.0 bits (79), Expect = 0.17 Identities = 11/42 (26%), Positives = 22/42 (52%) Frame = -2 Query: 463 FTLTYSNNMTFATIKGGGHTAPEYEPERCFAMFSRWILEKPL 338 + + Y +++ T++G GH P Y+P R + ++ K L Sbjct: 466 YIVQYKGDLSLVTVRGAGHEVPSYQPRRALVLVQNFLAGKAL 507
>CBP21_HORVU (P55747) Serine carboxypeptidase II-1 precursor (EC 3.4.16.6)| (CP-MII.1) [Contains: Serine carboxypeptidase II-1 chain A; Serine carboxypeptidase II-1 chain B] (Fragment) Length = 324 Score = 34.7 bits (78), Expect = 0.22 Identities = 15/45 (33%), Positives = 25/45 (55%) Frame = -2 Query: 439 MTFATIKGGGHTAPEYEPERCFAMFSRWILEKPL**T*QQRPAAS 305 +T TI+G GH P + P++ +F ++ +KP+ RPA S Sbjct: 281 LTLVTIRGAGHEVPLHRPQQALKLFEHFLQDKPM-----PRPAHS 320
>CBPY_CANAL (P30574) Carboxypeptidase Y precursor (EC 3.4.16.5)| (Carboxypeptidase YSCY) Length = 542 Score = 33.1 bits (74), Expect = 0.63 Identities = 13/30 (43%), Positives = 17/30 (56%) Frame = -2 Query: 442 NMTFATIKGGGHTAPEYEPERCFAMFSRWI 353 + TF + GGGH P +PE M +RWI Sbjct: 507 HFTFLRVFGGGHMVPYDQPENALDMVNRWI 536
>MMPL3_MYCTU (O53657) Putative membrane protein mmpL3| Length = 944 Score = 32.7 bits (73), Expect = 0.82 Identities = 19/60 (31%), Positives = 27/60 (45%) Frame = +1 Query: 157 LANGWRCEPPIGVGRPTSRPQGQIQPSPPHAKLTDLAPQSRSASAMPLGVRQLVVAVTST 336 ++NG PP+ G +R G P PPH LA R A + P +L A+ +T Sbjct: 759 VSNGRPARPPVTAGLVAARAAGD--PRPPHDPTHPLAESPRPARSSPASSPELTPALEAT 816
>CPS1_PENJA (P34946) Carboxypeptidase S1 (EC 3.4.16.6)| Length = 423 Score = 32.7 bits (73), Expect = 0.82 Identities = 12/36 (33%), Positives = 20/36 (55%) Frame = -2 Query: 445 NNMTFATIKGGGHTAPEYEPERCFAMFSRWILEKPL 338 +N +F + G GH P Y+P+ F + I +KP+ Sbjct: 385 DNFSFLKVYGAGHEVPYYQPDTALQAFKQIIQKKPI 420
>SHAN1_RAT (Q9WV48) SH3 and multiple ankyrin repeat domains protein 1 (Shank1)| (GKAP/SAPAP-interacting protein) (SPANK-1) (Synamon) (Somatostatin receptor-interacting protein) (SSTR-interacting protein) (SSTRIP) Length = 2167 Score = 32.7 bits (73), Expect = 0.82 Identities = 21/40 (52%), Positives = 24/40 (60%) Frame = +1 Query: 190 GVGRPTSRPQGQIQPSPPHAKLTDLAPQSRSASAMPLGVR 309 G PTS PQGQ QPS P KL+ + RSAS+ P G R Sbjct: 460 GTPGPTSGPQGQSQPSAPSTKLS--SGTLRSASS-PRGAR 496
>NF314_NAEFO (P42661) Virulence-related protein Nf314 (EC 3.4.16.-)| Length = 482 Score = 32.7 bits (73), Expect = 0.82 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = -2 Query: 439 MTFATIKGGGHTAPEYEPERCFAMFSRWI 353 +TF T++G GH P +P+ F MF +I Sbjct: 449 LTFITVRGAGHMVPLVKPDSAFYMFKNFI 477
>YSS2_CAEEL (Q09991) Putative serine carboxypeptidase K10B2.2 precursor (EC| 3.4.16.-) Length = 470 Score = 31.2 bits (69), Expect = 2.4 Identities = 13/40 (32%), Positives = 21/40 (52%) Frame = -2 Query: 463 FTLTYSNNMTFATIKGGGHTAPEYEPERCFAMFSRWILEK 344 F ++ N+ F T++G GH PE +P+ M +I K Sbjct: 423 FQTKFAGNVDFLTVRGSGHFVPEDKPKESQQMIFNFINNK 462
>HIS8_PROAC (Q6A8L4) Histidinol-phosphate aminotransferase (EC 2.6.1.9)| (Imidazole acetol-phosphate transaminase) Length = 388 Score = 31.2 bits (69), Expect = 2.4 Identities = 17/43 (39%), Positives = 22/43 (51%) Frame = +1 Query: 199 RPTSRPQGQIQPSPPHAKLTDLAPQSRSASAMPLGVRQLVVAV 327 R TS+P+ +P P +L DL +S A P G QL V V Sbjct: 5 RQTSQPRPVAKPEPNSIQLADLPLRSELVGAQPYGAPQLDVPV 47
>Y2601_MYCBO (P65016) Hypothetical protein Mb2601c| Length = 355 Score = 30.8 bits (68), Expect = 3.1 Identities = 17/48 (35%), Positives = 23/48 (47%) Frame = +1 Query: 193 VGRPTSRPQGQIQPSPPHAKLTDLAPQSRSASAMPLGVRQLVVAVTST 336 + R + P G P+P HA LTDLA + A A P + A +T Sbjct: 267 LARTIAGPGGDKLPTPVHAVLTDLAAGTGLADADPTAANEHAAAARAT 314
>Y2571_MYCTU (P65015) Hypothetical protein Rv2571c/MT2647| Length = 355 Score = 30.8 bits (68), Expect = 3.1 Identities = 17/48 (35%), Positives = 23/48 (47%) Frame = +1 Query: 193 VGRPTSRPQGQIQPSPPHAKLTDLAPQSRSASAMPLGVRQLVVAVTST 336 + R + P G P+P HA LTDLA + A A P + A +T Sbjct: 267 LARTIAGPGGDKLPTPVHAVLTDLAAGTGLADADPTAANEHAAAARAT 314
>CBPY_PICPA (P52710) Carboxypeptidase Y precursor (EC 3.4.16.5)| (Carboxypeptidase YSCY) Length = 523 Score = 30.8 bits (68), Expect = 3.1 Identities = 12/31 (38%), Positives = 17/31 (54%) Frame = -2 Query: 445 NNMTFATIKGGGHTAPEYEPERCFAMFSRWI 353 +N T+ + GH AP +PE M +RWI Sbjct: 486 SNFTYLRVYDAGHMAPYDQPENSHEMVNRWI 516
>CPVL_PONPY (Q5RFE4) Probable serine carboxypeptidase CPVL precursor (EC| 3.4.16.-) Length = 476 Score = 30.4 bits (67), Expect = 4.1 Identities = 13/27 (48%), Positives = 17/27 (62%) Frame = -2 Query: 424 IKGGGHTAPEYEPERCFAMFSRWILEK 344 I+GGGH P +P R F M +R+I K Sbjct: 443 IRGGGHILPYIQPLRAFDMINRFIYGK 469
>CBP2_HORVU (P08818) Serine carboxypeptidase 2 precursor (EC 3.4.16.6) (Serine| carboxypeptidase II) (Carboxypeptidase D) (CP-MII) [Contains: Serine carboxypeptidase 2 chain A (Serine carboxypeptidase II chain A); Serine carboxypeptidase 2 chain B (Serine Length = 476 Score = 30.4 bits (67), Expect = 4.1 Identities = 9/34 (26%), Positives = 20/34 (58%) Frame = -2 Query: 439 MTFATIKGGGHTAPEYEPERCFAMFSRWILEKPL 338 +T +++G GH P + P + +F +++ KP+ Sbjct: 433 LTLVSVRGAGHEVPLHRPRQALILFQQFLQGKPM 466
>ACCA_SHISS (Q3Z5H3) Acetyl-coenzyme A carboxylase carboxyl transferase subunit| alpha (EC 6.4.1.2) (Acetyl-CoA carboxylase carboxyltransferase subunit alpha) (ACCase subunit alpha) Length = 319 Score = 30.0 bits (66), Expect = 5.3 Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 5/64 (7%) Frame = -1 Query: 323 ATTSCLTPRGIADADLD*GARSVSLACGGEGWIWPWGREVGR-----PTPIGGSHRHPFA 159 +T S ++P G A L A LA G I P +E+ P P+GG+HR+P A Sbjct: 223 STYSVISPEGCASI-LWKSADKAPLAAEAMGIIAPRLKELKLIDSIIPEPLGGAHRNPEA 281 Query: 158 RAIS 147 A+S Sbjct: 282 MAVS 285
>CBP2_WHEAT (P08819) Serine carboxypeptidase 2 (EC 3.4.16.6) (Serine| carboxypeptidase II) (Carboxypeptidase D) (CPDW-II) (CP-WII) [Contains: Serine carboxypeptidase 2 chain A (Serine carboxypeptidase II chain A); Serine carboxypeptidase 2 chain B (Serine Length = 423 Score = 29.6 bits (65), Expect = 6.9 Identities = 9/34 (26%), Positives = 19/34 (55%) Frame = -2 Query: 439 MTFATIKGGGHTAPEYEPERCFAMFSRWILEKPL 338 +T +++G GH P + P + +F ++ KP+ Sbjct: 382 LTLVSVRGAGHEVPLHRPRQALVLFQYFLQGKPM 415
>CPVL_HUMAN (Q9H3G5) Probable serine carboxypeptidase CPVL precursor (EC| 3.4.16.-) (Carboxypeptidase, vitellogenic-like) (Vitellogenic carboxypeptidase-like protein) (VCP-like protein) (HVLP) Length = 476 Score = 29.6 bits (65), Expect = 6.9 Identities = 13/27 (48%), Positives = 17/27 (62%) Frame = -2 Query: 424 IKGGGHTAPEYEPERCFAMFSRWILEK 344 I+GGGH P +P R F M +R+I K Sbjct: 443 IRGGGHILPYDQPLRAFDMINRFIYGK 469
>JHD1_ASPFU (Q4WHB7) JmjC domain-containing histone demethylation protein 1 (EC| 1.14.11.-) Length = 1418 Score = 29.3 bits (64), Expect = 9.1 Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = +1 Query: 199 RPTSRPQGQIQPSPPHAKLTDLAPQSRSAS 288 RP RP+ + PSP H T +AP + +S Sbjct: 130 RPAKRPRSEKSPSPLHQPQTTVAPDANPSS 159
>YUW5_CAEEL (P52717) Putative serine carboxypeptidase F41C3.5 precursor (EC| 3.4.16.-) Length = 469 Score = 29.3 bits (64), Expect = 9.1 Identities = 11/39 (28%), Positives = 22/39 (56%) Frame = -2 Query: 454 TYSNNMTFATIKGGGHTAPEYEPERCFAMFSRWILEKPL 338 T + ++F TI+G GH AP++ + + +++ PL Sbjct: 431 TLFDGLSFITIRGAGHMAPQWRAPQMYYAVQQFLNNHPL 469
>SHAN1_HUMAN (Q9Y566) SH3 and multiple ankyrin repeat domains protein 1 (Shank1)| (Somatostatin receptor-interacting protein) (SSTR-interacting protein) (SSTRIP) Length = 2161 Score = 29.3 bits (64), Expect = 9.1 Identities = 20/40 (50%), Positives = 23/40 (57%) Frame = +1 Query: 190 GVGRPTSRPQGQIQPSPPHAKLTDLAPQSRSASAMPLGVR 309 G PTS QGQ QPS P KL+ + RSAS+ P G R Sbjct: 460 GAPGPTSGSQGQSQPSAPTTKLS--SGTLRSASS-PRGAR 496 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 92,357,214 Number of Sequences: 219361 Number of extensions: 1932655 Number of successful extensions: 5678 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 5282 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5664 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5253413348 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
