| Clone Name | rbaal5a01 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | CYF_CHAGL (Q8M9X2) Apocytochrome f precursor | 28 | 4.5 | 2 | CXB5_HUMAN (O95377) Gap junction beta-5 protein (Connexin-31.1) ... | 28 | 7.7 | 3 | BRO1_CANAL (Q5AJC1) Vacuolar protein-sorting protein BRO1 (BRO d... | 28 | 7.7 |
|---|
>CYF_CHAGL (Q8M9X2) Apocytochrome f precursor| Length = 318 Score = 28.5 bits (62), Expect = 4.5 Identities = 13/32 (40%), Positives = 18/32 (56%) Frame = -1 Query: 99 IPIFSTFNLSILSHSYIYTNIIRTNIKRPKGA 4 IPIF+TFNL S Y + + N + P+ A Sbjct: 18 IPIFTTFNLLFTSDCYAFPIYAQQNYENPREA 49
>CXB5_HUMAN (O95377) Gap junction beta-5 protein (Connexin-31.1) (Cx31.1)| Length = 273 Score = 27.7 bits (60), Expect = 7.7 Identities = 17/43 (39%), Positives = 20/43 (46%) Frame = -2 Query: 248 GRNMFXHGKSQGSIVFLSM*YPCSLXFKXXVFS*IQQVFHSMY 120 GR GK +G + + Y CSL FK V VFHS Y Sbjct: 114 GRLYLNPGKKRGGLWWT---YVCSLVFKASVDIAFLYVFHSFY 153
>BRO1_CANAL (Q5AJC1) Vacuolar protein-sorting protein BRO1 (BRO| domain-containing protein 1) Length = 945 Score = 27.7 bits (60), Expect = 7.7 Identities = 9/26 (34%), Positives = 17/26 (65%) Frame = -2 Query: 128 SMYFEILKFEYQYFLPLIYQFSAIHI 51 S + I+ F+Y+Y+ L Y F+ +H+ Sbjct: 284 SSWISIIYFKYEYYKSLAYYFNGLHL 309 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 35,401,894 Number of Sequences: 219361 Number of extensions: 535039 Number of successful extensions: 972 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 969 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 972 length of database: 80,573,946 effective HSP length: 75 effective length of database: 64,121,871 effective search space used: 1538924904 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)