ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal4j13
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1DCDA_METJA (Q58497) Diaminopimelate decarboxylase (EC 4.1.1.20) ... 30 4.9
2ASNS_MOUSE (Q61024) Asparagine synthetase [glutamine-hydrolyzing... 30 8.4

>DCDA_METJA (Q58497) Diaminopimelate decarboxylase (EC 4.1.1.20) (DAP|
           decarboxylase)
          Length = 438

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = +1

Query: 520 PGQQLPDTADLLMFQGSHYKQTPLSKWELL 609
           PG+ L  TA  L+ +  H K+TP++KW ++
Sbjct: 295 PGRSLVATAGYLLGKVHHIKETPVTKWVMI 324



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>ASNS_MOUSE (Q61024) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)|
           (Glutamine-dependent asparagine synthetase)
          Length = 560

 Score = 29.6 bits (65), Expect = 8.4
 Identities = 15/66 (22%), Positives = 33/66 (50%)
 Frame = -3

Query: 598 IWKAASVYSGFLGTSANLRYQVIAGLVEHRLGEYLVSYYNQPFLSNVLSFVARIINSYFG 419
           +W+    +S  + +  N  ++++   VEH++ + ++S  +Q F  N      +    YF 
Sbjct: 462 LWRPKEAFSDGITSVKNSWFKILQDYVEHQVDDEMMSAASQKFPFN----TPKTKEGYFY 517

Query: 418 TQLFQR 401
            Q+F+R
Sbjct: 518 RQIFER 523


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85,123,035
Number of Sequences: 219361
Number of extensions: 1617491
Number of successful extensions: 3147
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3093
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3147
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6370891296
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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