ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal4j05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_190821.1| Oryza sativa (japonica cultivar-group), predic... 353 5e-94
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 353 5e-94
3dbj|AP004669.3| Oryza sativa (japonica cultivar-group) genomic D... 353 5e-94
4dbj|AP003566.3| Oryza sativa (japonica cultivar-group) genomic D... 353 5e-94
5gb|AY108000.1| Zea mays PCO112270 mRNA sequence 299 7e-78
6gb|AC130600.3| Oryza sativa (japonica cultivar-group) chromosome... 74 7e-10
7ref|XM_475271.1| Oryza sativa (japonica cultivar-group), predic... 74 7e-10
8dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 74 7e-10
9dbj|AK121670.1| Oryza sativa (japonica cultivar-group) cDNA clon... 74 7e-10
10dbj|AK064776.1| Oryza sativa (japonica cultivar-group) cDNA clon... 74 7e-10
11ref|NM_121085.1| Arabidopsis thaliana ATP binding / microtubule ... 44 0.66
12gb|AC134046.4| Oryza sativa (japonica cultivar-group) chromosome... 44 0.66
13gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 44 0.66
14emb|AL353995.1|ATF12B17 Arabidopsis thaliana DNA chromosome 5, B... 44 0.66
15gb|AY100691.1| Arabidopsis thaliana geminivirus replication prot... 44 0.66
16gb|AC134887.4| Oryza sativa chromosome 3 BAC OSJNBa0029P07 genom... 44 0.66
17dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.66
18dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.66
19dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.66
20dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.66
21dbj|AP004784.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.66
22dbj|AP003507.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.66
23dbj|AP005502.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.66
24gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 44 0.66
25emb|AJ001729.1|ATTH65 Arabidopsis thaliana mRNA for Cdc2a associ... 44 0.66
26ref|NM_195789.1| Oryza sativa (japonica cultivar-group) putative... 42 2.6
27gb|AE009312.1| Agrobacterium tumefaciens str. C58 linear chromos... 42 2.6
28gb|AE008302.1| Agrobacterium tumefaciens str. C58 linear chromos... 42 2.6
29gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete... 42 2.6
30gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, comp... 42 2.6
31gb|AC115686.1| Oryza sativa (japonica cultivar-group) chromosome... 42 2.6
32emb|BX640473.9| Zebrafish DNA sequence from clone CH211-201F12 i... 42 2.6
33gb|AC020632.16| Homo sapiens 3 BAC RP11-333H9 (Roswell Park Canc... 42 2.6
34dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.6
35gb|AC119147.3| Genomic sequence for Oryza sativa, Nipponbare str... 42 2.6
36gb|AC096555.1| Homo sapiens BAC clone RP11-78N15 from 2, complet... 42 2.6
37dbj|AP004583.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.6
38dbj|AP005852.2| Oryza sativa (japonica cultivar-group) genomic D... 42 2.6
39emb|AL807388.8| Mouse DNA sequence from clone RP23-255K14 on chr... 42 2.6
40gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 42 2.6 
>ref|NM_190821.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1854

 Score =  353 bits (178), Expect = 5e-94
 Identities = 357/416 (85%), Gaps = 3/416 (0%)
 Strand = Plus / Minus

                                                                        
Query: 329  tccagagctttggtcctatcgatttcaaagtcgatgacaggaagcagactcctgatcgaa 388
            |||| |||||| ||||||||||| ||||||||||||||||||||||  |||||||| || 
Sbjct: 1808 tccatagcttttgtcctatcgatctcaaagtcgatgacaggaagcatcctcctgattgat 1749

                                                                        
Query: 389  agaaattctttcctgttaccactgcttggtgaatggctgttacttttgatcaacctgctt 448
            || || |||||| |||| |||||||||||||| || || ||||||||| |||||||||||
Sbjct: 1748 agcaactctttcatgttgccactgcttggtgagtgactattacttttgctcaacctgctt 1689

                                                                        
Query: 449  tgcttcatatgtcttgcctttgtgtcaaactcttggcttttgcttataccaggaacgaat 508
            |||||  ||||||| | ||| || || |||||||||||||||||||||||||| | ||||
Sbjct: 1688 tgcttgctatgtctggacttagtctcgaactcttggcttttgcttataccagggatgaat 1629

                                                                        
Query: 509  ttcctgtacttgacatcccttagcatctcttgttcttgttgtgtcagagcaggtgatgaa 568
            |||||||||||||||||||||||||| ||||| |||| ||| || |||  ||||||||||
Sbjct: 1628 ttcctgtacttgacatcccttagcatatcttgatcttcttgggtaagaagaggtgatgaa 1569

                                                                        
Query: 569  ---ctgctggctttgtttggagacaatgtgattgaagagcccctttgtgtaggagatcga 625
               |||||||||||||||||||| |||||||||| |  ||||||||||||||| ||||||
Sbjct: 1568 ttgctgctggctttgtttggagataatgtgattgtatggcccctttgtgtaggcgatcga 1509

                                                                        
Query: 626  acaggagacttgatgggagatcgctcgccgttagcggctctggattgactgatgagatgc 685
            |||||||| ||||||||||| |||||||| ||||||| | | ||| |||| || ||||| 
Sbjct: 1508 acaggagatttgatgggagaccgctcgccattagcggatttagatcgactaataagatga 1449

                                                                    
Query: 686  tgaagcgatacgacaagctcaaggatatgcccttcggtcttgtccctgtcagcatg 741
            |||||| || | |||||||| ||||||||   ||||||||| ||  ||||||||||
Sbjct: 1448 tgaagccatgcaacaagctcgaggatatgtgtttcggtcttttctttgtcagcatg 1393
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  353 bits (178), Expect = 5e-94
 Identities = 357/416 (85%), Gaps = 3/416 (0%)
 Strand = Plus / Plus

                                                                            
Query: 329      tccagagctttggtcctatcgatttcaaagtcgatgacaggaagcagactcctgatcgaa 388
                |||| |||||| ||||||||||| ||||||||||||||||||||||  |||||||| || 
Sbjct: 37892598 tccatagcttttgtcctatcgatctcaaagtcgatgacaggaagcatcctcctgattgat 37892657

                                                                            
Query: 389      agaaattctttcctgttaccactgcttggtgaatggctgttacttttgatcaacctgctt 448
                || || |||||| |||| |||||||||||||| || || ||||||||| |||||||||||
Sbjct: 37892658 agcaactctttcatgttgccactgcttggtgagtgactattacttttgctcaacctgctt 37892717

                                                                            
Query: 449      tgcttcatatgtcttgcctttgtgtcaaactcttggcttttgcttataccaggaacgaat 508
                |||||  ||||||| | ||| || || |||||||||||||||||||||||||| | ||||
Sbjct: 37892718 tgcttgctatgtctggacttagtctcgaactcttggcttttgcttataccagggatgaat 37892777

                                                                            
Query: 509      ttcctgtacttgacatcccttagcatctcttgttcttgttgtgtcagagcaggtgatgaa 568
                |||||||||||||||||||||||||| ||||| |||| ||| || |||  ||||||||||
Sbjct: 37892778 ttcctgtacttgacatcccttagcatatcttgatcttcttgggtaagaagaggtgatgaa 37892837

                                                                            
Query: 569      ---ctgctggctttgtttggagacaatgtgattgaagagcccctttgtgtaggagatcga 625
                   |||||||||||||||||||| |||||||||| |  ||||||||||||||| ||||||
Sbjct: 37892838 ttgctgctggctttgtttggagataatgtgattgtatggcccctttgtgtaggcgatcga 37892897

                                                                            
Query: 626      acaggagacttgatgggagatcgctcgccgttagcggctctggattgactgatgagatgc 685
                |||||||| ||||||||||| |||||||| ||||||| | | ||| |||| || ||||| 
Sbjct: 37892898 acaggagatttgatgggagaccgctcgccattagcggatttagatcgactaataagatga 37892957

                                                                        
Query: 686      tgaagcgatacgacaagctcaaggatatgcccttcggtcttgtccctgtcagcatg 741
                |||||| || | |||||||| ||||||||   ||||||||| ||  ||||||||||
Sbjct: 37892958 tgaagccatgcaacaagctcgaggatatgtgtttcggtcttttctttgtcagcatg 37893013



 Score = 77.8 bits (39), Expect = 5e-11
 Identities = 54/59 (91%)
 Strand = Plus / Plus

                                                                           
Query: 27       tcaaaacttgcattccttgtacaagagctcacaaacacaacaaattgctttttacaata 85
                |||||||||||||| |||||||||||||| ||||||||||  |||| ||||||||||||
Sbjct: 37892243 tcaaaacttgcatttcttgtacaagagctaacaaacacaaagaatttctttttacaata 37892301
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>dbj|AP004669.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0491F11
          Length = 152274

 Score =  353 bits (178), Expect = 5e-94
 Identities = 357/416 (85%), Gaps = 3/416 (0%)
 Strand = Plus / Plus

                                                                          
Query: 329    tccagagctttggtcctatcgatttcaaagtcgatgacaggaagcagactcctgatcgaa 388
              |||| |||||| ||||||||||| ||||||||||||||||||||||  |||||||| || 
Sbjct: 113954 tccatagcttttgtcctatcgatctcaaagtcgatgacaggaagcatcctcctgattgat 114013

                                                                          
Query: 389    agaaattctttcctgttaccactgcttggtgaatggctgttacttttgatcaacctgctt 448
              || || |||||| |||| |||||||||||||| || || ||||||||| |||||||||||
Sbjct: 114014 agcaactctttcatgttgccactgcttggtgagtgactattacttttgctcaacctgctt 114073

                                                                          
Query: 449    tgcttcatatgtcttgcctttgtgtcaaactcttggcttttgcttataccaggaacgaat 508
              |||||  ||||||| | ||| || || |||||||||||||||||||||||||| | ||||
Sbjct: 114074 tgcttgctatgtctggacttagtctcgaactcttggcttttgcttataccagggatgaat 114133

                                                                          
Query: 509    ttcctgtacttgacatcccttagcatctcttgttcttgttgtgtcagagcaggtgatgaa 568
              |||||||||||||||||||||||||| ||||| |||| ||| || |||  ||||||||||
Sbjct: 114134 ttcctgtacttgacatcccttagcatatcttgatcttcttgggtaagaagaggtgatgaa 114193

                                                                          
Query: 569    ---ctgctggctttgtttggagacaatgtgattgaagagcccctttgtgtaggagatcga 625
                 |||||||||||||||||||| |||||||||| |  ||||||||||||||| ||||||
Sbjct: 114194 ttgctgctggctttgtttggagataatgtgattgtatggcccctttgtgtaggcgatcga 114253

                                                                          
Query: 626    acaggagacttgatgggagatcgctcgccgttagcggctctggattgactgatgagatgc 685
              |||||||| ||||||||||| |||||||| ||||||| | | ||| |||| || ||||| 
Sbjct: 114254 acaggagatttgatgggagaccgctcgccattagcggatttagatcgactaataagatga 114313

                                                                      
Query: 686    tgaagcgatacgacaagctcaaggatatgcccttcggtcttgtccctgtcagcatg 741
              |||||| || | |||||||| ||||||||   ||||||||| ||  ||||||||||
Sbjct: 114314 tgaagccatgcaacaagctcgaggatatgtgtttcggtcttttctttgtcagcatg 114369



 Score = 77.8 bits (39), Expect = 5e-11
 Identities = 54/59 (91%)
 Strand = Plus / Plus

                                                                         
Query: 27     tcaaaacttgcattccttgtacaagagctcacaaacacaacaaattgctttttacaata 85
              |||||||||||||| |||||||||||||| ||||||||||  |||| ||||||||||||
Sbjct: 113599 tcaaaacttgcatttcttgtacaagagctaacaaacacaaagaatttctttttacaata 113657
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>dbj|AP003566.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBb0008G24
          Length = 152736

 Score =  353 bits (178), Expect = 5e-94
 Identities = 357/416 (85%), Gaps = 3/416 (0%)
 Strand = Plus / Plus

                                                                          
Query: 329    tccagagctttggtcctatcgatttcaaagtcgatgacaggaagcagactcctgatcgaa 388
              |||| |||||| ||||||||||| ||||||||||||||||||||||  |||||||| || 
Sbjct: 151846 tccatagcttttgtcctatcgatctcaaagtcgatgacaggaagcatcctcctgattgat 151905

                                                                          
Query: 389    agaaattctttcctgttaccactgcttggtgaatggctgttacttttgatcaacctgctt 448
              || || |||||| |||| |||||||||||||| || || ||||||||| |||||||||||
Sbjct: 151906 agcaactctttcatgttgccactgcttggtgagtgactattacttttgctcaacctgctt 151965

                                                                          
Query: 449    tgcttcatatgtcttgcctttgtgtcaaactcttggcttttgcttataccaggaacgaat 508
              |||||  ||||||| | ||| || || |||||||||||||||||||||||||| | ||||
Sbjct: 151966 tgcttgctatgtctggacttagtctcgaactcttggcttttgcttataccagggatgaat 152025

                                                                          
Query: 509    ttcctgtacttgacatcccttagcatctcttgttcttgttgtgtcagagcaggtgatgaa 568
              |||||||||||||||||||||||||| ||||| |||| ||| || |||  ||||||||||
Sbjct: 152026 ttcctgtacttgacatcccttagcatatcttgatcttcttgggtaagaagaggtgatgaa 152085

                                                                          
Query: 569    ---ctgctggctttgtttggagacaatgtgattgaagagcccctttgtgtaggagatcga 625
                 |||||||||||||||||||| |||||||||| |  ||||||||||||||| ||||||
Sbjct: 152086 ttgctgctggctttgtttggagataatgtgattgtatggcccctttgtgtaggcgatcga 152145

                                                                          
Query: 626    acaggagacttgatgggagatcgctcgccgttagcggctctggattgactgatgagatgc 685
              |||||||| ||||||||||| |||||||| ||||||| | | ||| |||| || ||||| 
Sbjct: 152146 acaggagatttgatgggagaccgctcgccattagcggatttagatcgactaataagatga 152205

                                                                      
Query: 686    tgaagcgatacgacaagctcaaggatatgcccttcggtcttgtccctgtcagcatg 741
              |||||| || | |||||||| ||||||||   ||||||||| ||  ||||||||||
Sbjct: 152206 tgaagccatgcaacaagctcgaggatatgtgtttcggtcttttctttgtcagcatg 152261



 Score = 77.8 bits (39), Expect = 5e-11
 Identities = 54/59 (91%)
 Strand = Plus / Plus

                                                                         
Query: 27     tcaaaacttgcattccttgtacaagagctcacaaacacaacaaattgctttttacaata 85
              |||||||||||||| |||||||||||||| ||||||||||  |||| ||||||||||||
Sbjct: 151491 tcaaaacttgcatttcttgtacaagagctaacaaacacaaagaatttctttttacaata 151549
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>gb|AY108000.1| Zea mays PCO112270 mRNA sequence
          Length = 823

 Score =  299 bits (151), Expect = 7e-78
 Identities = 285/329 (86%), Gaps = 3/329 (0%)
 Strand = Plus / Minus

                                                                       
Query: 320 tcgatcatatccagagctttggtcctatcgatttcaaagtcgatgacaggaagcagactc 379
           ||||||||||| || |||||  |||| ||||| ||||||||||| ||||||||||| |||
Sbjct: 423 tcgatcatatcaagggcttttatcctgtcgatctcaaagtcgatcacaggaagcagcctc 364

                                                                       
Query: 380 ctgatcgaaagaaattctttcctgttaccactgcttggtgaatggctgttacttttgatc 439
           ||||| || ||    ||||||| ||| |||||||||||||||||||| ||||||||| | 
Sbjct: 363 ctgattgatagcgtctctttccggttgccactgcttggtgaatggctattacttttgctt 304

                                                                       
Query: 440 aacctgctttgcttcatatgtcttgcctttgtgtcaaactcttggcttttgcttatacca 499
           ||||||||||||||  |||| ||| |||| ||||||||||| ||||||||||||||||||
Sbjct: 303 aacctgctttgcttattatgcctttccttagtgtcaaactcctggcttttgcttatacca 244

                                                                       
Query: 500 ggaacgaatttcctgtacttgacatcccttagcatctcttgttcttgttgtgtcagagca 559
           || | |||||||||||||||||||||||||||||| ||||| |||| ||| ||||||  |
Sbjct: 243 gggatgaatttcctgtacttgacatcccttagcatatcttgatcttcttgcgtcagaaga 184

                                                                       
Query: 560 ggtgatgaa---ctgctggctttgtttggagacaatgtgattgaagagcccctttgtgta 616
           |||||||||   ||||||  |||||||||||||||||||||||| |  || |||||||||
Sbjct: 183 ggtgatgaattgctgctgtttttgtttggagacaatgtgattgaggcccctctttgtgta 124

                                        
Query: 617 ggagatcgaacaggagacttgatgggaga 645
           ||||| ||||||||||||||||| |||||
Sbjct: 123 ggagaccgaacaggagacttgattggaga 95



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 67/75 (89%)
 Strand = Plus / Minus

                                                                       
Query: 26  ctcaaaacttgcattccttgtacaagagctcacaaacacaacaaattgctttttacaata 85
           ||||||||||| |||||||||||| ||||| |  ||||||||||||  ||||||||||||
Sbjct: 771 ctcaaaacttgtattccttgtacatgagctaagtaacacaacaaatccctttttacaata 712

                          
Query: 86  aaatttccctttcct 100
           ||||||| |||||||
Sbjct: 711 aaatttcactttcct 697
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>gb|AC130600.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0048I21,
              complete sequence
          Length = 137650

 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 52/57 (91%)
 Strand = Plus / Minus

                                                                       
Query: 456    tatgtcttgcctttgtgtcaaactcttggcttttgcttataccaggaacgaatttcc 512
              ||||||||| |||||||||||||||||| || |||||||| ||||| ||||||||||
Sbjct: 108837 tatgtcttgactttgtgtcaaactcttgactcttgcttattccagggacgaatttcc 108781



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                               
Query: 666    tggattgactgatgagatgctgaagcgatacgacaagctcaaggatatg 714
              |||||| |||||||||||| || ||| | ||||||||||||||||||||
Sbjct: 108630 tggatttactgatgagatgatggagccacacgacaagctcaaggatatg 108582



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                            
Query: 329    tccagagctttggtcctatcgatttcaaagtcgatgacaggaagca 374
              |||| ||||||||||||||| || |  |||||||||||||||||||
Sbjct: 108970 tccaaagctttggtcctatccatctggaagtcgatgacaggaagca 108925
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>ref|XM_475271.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1923

 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 52/57 (91%)
 Strand = Plus / Minus

                                                                     
Query: 456  tatgtcttgcctttgtgtcaaactcttggcttttgcttataccaggaacgaatttcc 512
            ||||||||| |||||||||||||||||| || |||||||| ||||| ||||||||||
Sbjct: 1753 tatgtcttgactttgtgtcaaactcttgactcttgcttattccagggacgaatttcc 1697



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                             
Query: 666  tggattgactgatgagatgctgaagcgatacgacaagctcaaggatatg 714
            |||||| |||||||||||| || ||| | ||||||||||||||||||||
Sbjct: 1546 tggatttactgatgagatgatggagccacacgacaagctcaaggatatg 1498



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                          
Query: 329  tccagagctttggtcctatcgatttcaaagtcgatgacaggaagca 374
            |||| ||||||||||||||| || |  |||||||||||||||||||
Sbjct: 1886 tccaaagctttggtcctatccatctggaagtcgatgacaggaagca 1841
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 52/57 (91%)
 Strand = Plus / Minus

                                                                         
Query: 456      tatgtcttgcctttgtgtcaaactcttggcttttgcttataccaggaacgaatttcc 512
                ||||||||| |||||||||||||||||| || |||||||| ||||| ||||||||||
Sbjct: 20982059 tatgtcttgactttgtgtcaaactcttgactcttgcttattccagggacgaatttcc 20982003



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                                 
Query: 666      tggattgactgatgagatgctgaagcgatacgacaagctcaaggatatg 714
                |||||| |||||||||||| || ||| | ||||||||||||||||||||
Sbjct: 20981852 tggatttactgatgagatgatggagccacacgacaagctcaaggatatg 20981804



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                              
Query: 329      tccagagctttggtcctatcgatttcaaagtcgatgacaggaagca 374
                |||| ||||||||||||||| || |  |||||||||||||||||||
Sbjct: 20982192 tccaaagctttggtcctatccatctggaagtcgatgacaggaagca 20982147
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>dbj|AK121670.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033067N19, full
            insert sequence
          Length = 2746

 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 52/57 (91%)
 Strand = Plus / Minus

                                                                     
Query: 456  tatgtcttgcctttgtgtcaaactcttggcttttgcttataccaggaacgaatttcc 512
            ||||||||| |||||||||||||||||| || |||||||| ||||| ||||||||||
Sbjct: 2266 tatgtcttgactttgtgtcaaactcttgactcttgcttattccagggacgaatttcc 2210



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                             
Query: 666  tggattgactgatgagatgctgaagcgatacgacaagctcaaggatatg 714
            |||||| |||||||||||| || ||| | ||||||||||||||||||||
Sbjct: 2059 tggatttactgatgagatgatggagccacacgacaagctcaaggatatg 2011



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                          
Query: 329  tccagagctttggtcctatcgatttcaaagtcgatgacaggaagca 374
            |||| ||||||||||||||| || |  |||||||||||||||||||
Sbjct: 2399 tccaaagctttggtcctatccatctggaagtcgatgacaggaagca 2354
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>dbj|AK064776.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000B01, full
            insert sequence
          Length = 2805

 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 52/57 (91%)
 Strand = Plus / Minus

                                                                     
Query: 456  tatgtcttgcctttgtgtcaaactcttggcttttgcttataccaggaacgaatttcc 512
            ||||||||| |||||||||||||||||| || |||||||| ||||| ||||||||||
Sbjct: 2322 tatgtcttgactttgtgtcaaactcttgactcttgcttattccagggacgaatttcc 2266



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                             
Query: 666  tggattgactgatgagatgctgaagcgatacgacaagctcaaggatatg 714
            |||||| |||||||||||| || ||| | ||||||||||||||||||||
Sbjct: 2115 tggatttactgatgagatgatggagccacacgacaagctcaaggatatg 2067



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                          
Query: 329  tccagagctttggtcctatcgatttcaaagtcgatgacaggaagca 374
            |||| ||||||||||||||| || |  |||||||||||||||||||
Sbjct: 2455 tccaaagctttggtcctatccatctggaagtcgatgacaggaagca 2410
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>ref|NM_121085.1| Arabidopsis thaliana ATP binding / microtubule motor AT5G10470 mRNA,
            complete cds
          Length = 3822

 Score = 44.1 bits (22), Expect = 0.66
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 531  gcatctcttgttcttgttgtgtcaga 556
            ||||||| ||||||||||||||||||
Sbjct: 1808 gcatctcctgttcttgttgtgtcaga 1783
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>gb|AC134046.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0040G18, complete sequence
          Length = 172281

 Score = 44.1 bits (22), Expect = 0.66
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 440   aacctgctttgcttcatatgtc 461
             ||||||||||||||||||||||
Sbjct: 70563 aacctgctttgcttcatatgtc 70542
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 44.1 bits (22), Expect = 0.66
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 440      aacctgctttgcttcatatgtc 461
                ||||||||||||||||||||||
Sbjct: 20741746 aacctgctttgcttcatatgtc 20741767
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>emb|AL353995.1|ATF12B17 Arabidopsis thaliana DNA chromosome 5, BAC clone F12B17 (ESSA project)
          Length = 113053

 Score = 44.1 bits (22), Expect = 0.66
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 531   gcatctcttgttcttgttgtgtcaga 556
             ||||||| ||||||||||||||||||
Sbjct: 71377 gcatctcctgttcttgttgtgtcaga 71352
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>gb|AY100691.1| Arabidopsis thaliana geminivirus replication protein-interacting
            protein (GRIMP) mRNA, complete cds
          Length = 3822

 Score = 44.1 bits (22), Expect = 0.66
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 531  gcatctcttgttcttgttgtgtcaga 556
            ||||||| ||||||||||||||||||
Sbjct: 1808 gcatctcctgttcttgttgtgtcaga 1783
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>gb|AC134887.4| Oryza sativa chromosome 3 BAC OSJNBa0029P07 genomic sequence, complete
             sequence
          Length = 142047

 Score = 44.1 bits (22), Expect = 0.66
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 440   aacctgctttgcttcatatgtc 461
             ||||||||||||||||||||||
Sbjct: 31856 aacctgctttgcttcatatgtc 31877
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 44.1 bits (22), Expect = 0.66
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 440     aacctgctttgcttcatatgtc 461
               ||||||||||||||||||||||
Sbjct: 4579979 aacctgctttgcttcatatgtc 4580000
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 44.1 bits (22), Expect = 0.66
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 440      aacctgctttgcttcatatgtc 461
                ||||||||||||||||||||||
Sbjct: 18328489 aacctgctttgcttcatatgtc 18328510
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 44.1 bits (22), Expect = 0.66
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 440      aacctgctttgcttcatatgtc 461
                ||||||||||||||||||||||
Sbjct: 13215021 aacctgctttgcttcatatgtc 13215042



 Score = 44.1 bits (22), Expect = 0.66
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 440      aacctgctttgcttcatatgtc 461
                ||||||||||||||||||||||
Sbjct: 12145784 aacctgctttgcttcatatgtc 12145763



 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 440      aacctgctttgcttcatatgt 460
                |||||||||||||||||||||
Sbjct: 11675524 aacctgctttgcttcatatgt 11675544



 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 440      aacctgctttgcttcatatgt 460
                |||||||||||||||||||||
Sbjct: 11586845 aacctgctttgcttcatatgt 11586865
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 44.1 bits (22), Expect = 0.66
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 440      aacctgctttgcttcatatgtc 461
                ||||||||||||||||||||||
Sbjct: 20734775 aacctgctttgcttcatatgtc 20734796
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>dbj|AP004784.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0012F14
          Length = 168629

 Score = 44.1 bits (22), Expect = 0.66
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 440    aacctgctttgcttcatatgtc 461
              ||||||||||||||||||||||
Sbjct: 132209 aacctgctttgcttcatatgtc 132230
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>dbj|AP003507.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0468A12
          Length = 143018

 Score = 44.1 bits (22), Expect = 0.66
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 440   aacctgctttgcttcatatgtc 461
             ||||||||||||||||||||||
Sbjct: 88573 aacctgctttgcttcatatgtc 88552
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>dbj|AP005502.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0473F05
          Length = 140575

 Score = 44.1 bits (22), Expect = 0.66
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 440   aacctgctttgcttcatatgtc 461
             ||||||||||||||||||||||
Sbjct: 14658 aacctgctttgcttcatatgtc 14679
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 44.1 bits (22), Expect = 0.66
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 440     aacctgctttgcttcatatgtc 461
               ||||||||||||||||||||||
Sbjct: 4601230 aacctgctttgcttcatatgtc 4601251
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>emb|AJ001729.1|ATTH65 Arabidopsis thaliana mRNA for Cdc2a associating protein
          Length = 1182

 Score = 44.1 bits (22), Expect = 0.66
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 531 gcatctcttgttcttgttgtgtcaga 556
           ||||||| ||||||||||||||||||
Sbjct: 392 gcatctcctgttcttgttgtgtcaga 367
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>ref|NM_195789.1| Oryza sativa (japonica cultivar-group) putative transposable
           element (OJ1325D05.26), mRNA
          Length = 2109

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 440 aacctgctttgcttcatatgt 460
           |||||||||||||||||||||
Sbjct: 312 aacctgctttgcttcatatgt 292
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>gb|AE009312.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 82 of
            187 of the complete sequence
          Length = 11082

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 701  agctcaaggatatgcccttcg 721
            |||||||||||||||||||||
Sbjct: 2231 agctcaaggatatgcccttcg 2211
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>gb|AE008302.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 106 of
            187 of the complete sequence
          Length = 11111

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 701  agctcaaggatatgcccttcg 721
            |||||||||||||||||||||
Sbjct: 8881 agctcaaggatatgcccttcg 8901
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>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 538     ttgttcttgttgtgtcagagc 558
               |||||||||||||||||||||
Sbjct: 4476170 ttgttcttgttgtgtcagagc 4476150
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>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome
          Length = 5928787

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 538     ttgttcttgttgtgtcagagc 558
               |||||||||||||||||||||
Sbjct: 3034316 ttgttcttgttgtgtcagagc 3034336
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>gb|AC115686.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OJ1325D05,
              complete sequence
          Length = 169500

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 440    aacctgctttgcttcatatgt 460
              |||||||||||||||||||||
Sbjct: 132779 aacctgctttgcttcatatgt 132759
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>emb|BX640473.9| Zebrafish DNA sequence from clone CH211-201F12 in linkage group 5,
              complete sequence
          Length = 193735

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 68     aaattgctttttacaataaaa 88
              |||||||||||||||||||||
Sbjct: 175104 aaattgctttttacaataaaa 175124
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>gb|AC020632.16| Homo sapiens 3 BAC RP11-333H9 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 162029

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 76    ttttacaataaaatttccctt 96
             |||||||||||||||||||||
Sbjct: 86480 ttttacaataaaatttccctt 86460
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 440     aacctgctttgcttcatatgt 460
               |||||||||||||||||||||
Sbjct: 9055945 aacctgctttgcttcatatgt 9055965
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>gb|AC119147.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0027A14, from chromosome 10, complete sequence
          Length = 175667

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 440    aacctgctttgcttcatatgt 460
              |||||||||||||||||||||
Sbjct: 144168 aacctgctttgcttcatatgt 144188
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>gb|AC096555.1| Homo sapiens BAC clone RP11-78N15 from 2, complete sequence
          Length = 155942

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 68     aaattgctttttacaataaaatttc 92
              ||||||||||||| |||||||||||
Sbjct: 139177 aaattgctttttataataaaatttc 139201
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>dbj|AP004583.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBb0005N06
          Length = 140639

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 440   aacctgctttgcttcatatgt 460
             |||||||||||||||||||||
Sbjct: 24066 aacctgctttgcttcatatgt 24086
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>dbj|AP005852.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0414E10
          Length = 141760

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 440   aacctgctttgcttcatatgt 460
             |||||||||||||||||||||
Sbjct: 64731 aacctgctttgcttcatatgt 64751
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>emb|AL807388.8| Mouse DNA sequence from clone RP23-255K14 on chromosome X, complete
             sequence
          Length = 157955

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 395   tctttcctgttaccactgctt 415
             |||||||||||||||||||||
Sbjct: 19383 tctttcctgttaccactgctt 19403
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 440     aacctgctttgcttcatatgt 460
               |||||||||||||||||||||
Sbjct: 9061084 aacctgctttgcttcatatgt 9061104


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,942,058
Number of Sequences: 3902068
Number of extensions: 6942058
Number of successful extensions: 144758
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 144157
Number of HSP's gapped (non-prelim): 595
length of query: 749
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 726
effective length of database: 17,143,297,704
effective search space: 12446034133104
effective search space used: 12446034133104
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)
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