ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal4h11 |
|---|---|
| Clone Library Name | barley_pub |
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 147 bits (74), Expect = 5e-32 Identities = 134/154 (87%) Strand = Plus / Minus Query: 334 ggttgttgtcagctggatgcgctaggtcccaagaacttctgcactgccttgaacaactgc 393 ||||| ||||||||||| ||| || |||||||||||||| ||||||| ||| | |||| Sbjct: 28763082 ggttggtgtcagctggaaacgcatgggcccaagaacttctgtactgcctggaagagctgc 28763023 Query: 394 ttctcctcgaagggtttcgagacgtagccgtccattccattctttgtgcattcctcatgg 453 |||||||| ||||| |||||||||||||| ||||| || ||||||||||||||| ||| Sbjct: 28763022 ttctcctcaaagggcttcgagacgtagccatccatcccgcactttgtgcattcctcgtgg 28762963 Query: 454 gtggcctggatgacatcggcagtcattgccagga 487 ||||||||||||||||| || ||||||||||||| Sbjct: 28762962 gtggcctggatgacatcagcggtcattgccagga 28762929 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 549 tgccttcgcttcaattgcccgtatttgccgggttgcctcaaa 590 ||||||| |||| ||||| ||||||||||| ||||||||||| Sbjct: 28762858 tgccttcccttccattgctcgtatttgccgagttgcctcaaa 28762817
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 147 bits (74), Expect = 5e-32 Identities = 134/154 (87%) Strand = Plus / Minus Query: 334 ggttgttgtcagctggatgcgctaggtcccaagaacttctgcactgccttgaacaactgc 393 ||||| ||||||||||| ||| || |||||||||||||| ||||||| ||| | |||| Sbjct: 28854406 ggttggtgtcagctggaaacgcatgggcccaagaacttctgtactgcctggaagagctgc 28854347 Query: 394 ttctcctcgaagggtttcgagacgtagccgtccattccattctttgtgcattcctcatgg 453 |||||||| ||||| |||||||||||||| ||||| || ||||||||||||||| ||| Sbjct: 28854346 ttctcctcaaagggcttcgagacgtagccatccatcccgcactttgtgcattcctcgtgg 28854287 Query: 454 gtggcctggatgacatcggcagtcattgccagga 487 ||||||||||||||||| || ||||||||||||| Sbjct: 28854286 gtggcctggatgacatcagcggtcattgccagga 28854253 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 549 tgccttcgcttcaattgcccgtatttgccgggttgcctcaaa 590 ||||||| |||| ||||| ||||||||||| ||||||||||| Sbjct: 28854182 tgccttcccttccattgctcgtatttgccgagttgcctcaaa 28854141
>gb|AC091532.13| Oryza sativa chromosome 3 BAC OSJNBa0078A17 genomic sequence, complete sequence Length = 147344 Score = 147 bits (74), Expect = 5e-32 Identities = 134/154 (87%) Strand = Plus / Minus Query: 334 ggttgttgtcagctggatgcgctaggtcccaagaacttctgcactgccttgaacaactgc 393 ||||| ||||||||||| ||| || |||||||||||||| ||||||| ||| | |||| Sbjct: 70063 ggttggtgtcagctggaaacgcatgggcccaagaacttctgtactgcctggaagagctgc 70004 Query: 394 ttctcctcgaagggtttcgagacgtagccgtccattccattctttgtgcattcctcatgg 453 |||||||| ||||| |||||||||||||| ||||| || ||||||||||||||| ||| Sbjct: 70003 ttctcctcaaagggcttcgagacgtagccatccatcccgcactttgtgcattcctcgtgg 69944 Query: 454 gtggcctggatgacatcggcagtcattgccagga 487 ||||||||||||||||| || ||||||||||||| Sbjct: 69943 gtggcctggatgacatcagcggtcattgccagga 69910 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 549 tgccttcgcttcaattgcccgtatttgccgggttgcctcaaa 590 ||||||| |||| ||||| ||||||||||| ||||||||||| Sbjct: 69839 tgccttcccttccattgctcgtatttgccgagttgcctcaaa 69798
>dbj|AK060709.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-H10, full insert sequence Length = 1432 Score = 147 bits (74), Expect = 5e-32 Identities = 134/154 (87%) Strand = Plus / Minus Query: 334 ggttgttgtcagctggatgcgctaggtcccaagaacttctgcactgccttgaacaactgc 393 ||||| ||||||||||| ||| || |||||||||||||| ||||||| ||| | |||| Sbjct: 879 ggttggtgtcagctggaaacgcatgggcccaagaacttctgtactgcctggaagagctgc 820 Query: 394 ttctcctcgaagggtttcgagacgtagccgtccattccattctttgtgcattcctcatgg 453 |||||||| ||||| |||||||||||||| ||||| || ||||||||||||||| ||| Sbjct: 819 ttctcctcaaagggcttcgagacgtagccatccatcccgcactttgtgcattcctcgtgg 760 Query: 454 gtggcctggatgacatcggcagtcattgccagga 487 ||||||||||||||||| || ||||||||||||| Sbjct: 759 gtggcctggatgacatcagcggtcattgccagga 726 Score = 79.8 bits (40), Expect = 1e-11 Identities = 64/72 (88%) Strand = Plus / Minus Query: 549 tgccttcgcttcaattgcccgtatttgccgggttgcctcaaacccatccatctctggcat 608 ||||||| |||| ||||| ||||||||||| ||||||||||| ||||||||||| ||||| Sbjct: 655 tgccttcccttccattgctcgtatttgccgagttgcctcaaatccatccatctccggcat 596 Query: 609 ttgaatatccat 620 ||||| ||||| Sbjct: 595 ctgaatgtccat 584
>ref|XM_469566.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3042 Score = 141 bits (71), Expect = 3e-30 Identities = 113/127 (88%) Strand = Plus / Minus Query: 361 cccaagaacttctgcactgccttgaacaactgcttctcctcgaagggtttcgagacgtag 420 |||||||||||||| ||||||| ||| | |||||||||||| ||||| |||||||||||| Sbjct: 3023 cccaagaacttctgtactgcctggaagagctgcttctcctcaaagggcttcgagacgtag 2964 Query: 421 ccgtccattccattctttgtgcattcctcatgggtggcctggatgacatcggcagtcatt 480 || ||||| || ||||||||||||||| |||||||||||||||||||| || |||||| Sbjct: 2963 ccatccatcccgcactttgtgcattcctcgtgggtggcctggatgacatcagcggtcatt 2904 Query: 481 gccagga 487 ||||||| Sbjct: 2903 gccagga 2897 Score = 79.8 bits (40), Expect = 1e-11 Identities = 64/72 (88%) Strand = Plus / Minus Query: 549 tgccttcgcttcaattgcccgtatttgccgggttgcctcaaacccatccatctctggcat 608 ||||||| |||| ||||| ||||||||||| ||||||||||| ||||||||||| ||||| Sbjct: 2826 tgccttcccttccattgctcgtatttgccgagttgcctcaaatccatccatctccggcat 2767 Query: 609 ttgaatatccat 620 ||||| ||||| Sbjct: 2766 ctgaatgtccat 2755
>dbj|AB206392.1| Zea mays ZmHK1b1' mRNA for histidine kinase, complete cds Length = 3046 Score = 137 bits (69), Expect = 5e-29 Identities = 123/141 (87%) Strand = Plus / Minus Query: 362 ccaagaacttctgcactgccttgaacaactgcttctcctcgaagggtttcgagacgtagc 421 ||||||||||||||| |||| ||| | |||||||||||||||||| |||| |||||| | Sbjct: 2983 ccaagaacttctgcagcgcctggaagagctgcttctcctcgaagggcttcgtgacgtacc 2924 Query: 422 cgtccattccattctttgtgcattcctcatgggtggcctggatgacatcggcagtcattg 481 | ||||| || | ||||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 2923 catccatcccgtactttgtgcactcctcatgggtggcctggatgacatcggcggtcattg 2864 Query: 482 ccaggaccggtagatgccatc 502 | ||||| || || ||||||| Sbjct: 2863 caaggacaggcaggtgccatc 2843 Score = 63.9 bits (32), Expect = 6e-07 Identities = 62/72 (86%) Strand = Plus / Minus Query: 549 tgccttcgcttcaattgcccgtatttgccgggttgcctcaaacccatccatctctggcat 608 |||||||||||| ||||||| ||||||| ||| ||||| ||||||||||| || ||||| Sbjct: 2784 tgccttcgcttccattgcccttatttgcttggtggcctcgaacccatccatttcgggcat 2725 Query: 609 ttgaatatccat 620 ||||| ||||| Sbjct: 2724 ctgaatgtccat 2713
>dbj|AB206391.1| Zea mays ZmHK1b1 mRNA for histidine kinase, complete cds Length = 3046 Score = 137 bits (69), Expect = 5e-29 Identities = 123/141 (87%) Strand = Plus / Minus Query: 362 ccaagaacttctgcactgccttgaacaactgcttctcctcgaagggtttcgagacgtagc 421 ||||||||||||||| |||| ||| | |||||||||||||||||| |||| |||||| | Sbjct: 2983 ccaagaacttctgcagcgcctggaagagctgcttctcctcgaagggcttcgtgacgtacc 2924 Query: 422 cgtccattccattctttgtgcattcctcatgggtggcctggatgacatcggcagtcattg 481 ||||||| || | ||| ||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 2923 cgtccatcccgtacttcgtgcactcctcatgggtggcctggatgacatcggcggtcattg 2864 Query: 482 ccaggaccggtagatgccatc 502 | ||||| || || ||||||| Sbjct: 2863 caaggacaggcaggtgccatc 2843
>dbj|AB206393.1| Zea mays ZmHK1b2 mRNA for histidine kinase, complete cds Length = 3033 Score = 97.6 bits (49), Expect = 4e-17 Identities = 103/121 (85%) Strand = Plus / Minus Query: 362 ccaagaacttctgcactgccttgaacaactgcttctcctcgaagggtttcgagacgtagc 421 ||||||||||||||| |||| ||| | |||||||||||||||||| || | |||||| | Sbjct: 2986 ccaagaacttctgcaacgcctggaagagctgcttctcctcgaagggctttgtgacgtacc 2927 Query: 422 cgtccattccattctttgtgcattcctcatgggtggcctggatgacatcggcagtcattg 481 | ||||| || ||| ||||| || |||||||||||||||||||||||||| ||||||| Sbjct: 2926 catccataccgcacttcgtgcactcttcatgggtggcctggatgacatcggcggtcattg 2867 Query: 482 c 482 | Sbjct: 2866 c 2866 Score = 71.9 bits (36), Expect = 2e-09 Identities = 63/72 (87%) Strand = Plus / Minus Query: 549 tgccttcgcttcaattgcccgtatttgccgggttgcctcaaacccatccatctctggcat 608 |||||||||||| ||||||| ||||||| ||| ||||||||||||||||| || ||||| Sbjct: 2787 tgccttcgcttccattgcccttatttgcttggtagcctcaaacccatccatttcgggcat 2728 Query: 609 ttgaatatccat 620 ||||| ||||| Sbjct: 2727 ctgaatgtccat 2716
>ref|XM_467688.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2955 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 580 gttgcctcaaacccatccatctctggcatttgaatatccat 620 ||||||||||||||||||||||||||||| |||| |||||| Sbjct: 2708 gttgcctcaaacccatccatctctggcatctgaacatccat 2668
>dbj|AB206390.1| Zea mays ZmHK1a2 mRNA for histidine kinase, complete cds Length = 2972 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 580 gttgcctcaaacccatccatctctggcatttgaatatccat 620 ||||||||||||||||||||||||||||| |||| |||||| Sbjct: 2687 gttgcctcaaacccatccatctctggcatctgaacatccat 2647
>dbj|AB042270.1| Zea mays ZmHK1 mRNA for histidine kinase 1, complete cds Length = 3041 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 570 tatttgccgggttgcctcaaacccatccatctctggcatttgaatatccat 620 |||||| | ||||||||||||||| |||||||||||||| |||| |||||| Sbjct: 2761 tatttgtccggttgcctcaaacccgtccatctctggcatctgaacatccat 2711 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 457 gcctggatgacatcggcagtcattgccag 485 |||||||| |||||||| ||||||||||| Sbjct: 2880 gcctggataacatcggctgtcattgccag 2852
>gb|AY108856.1| Zea mays PCO066747 mRNA sequence Length = 936 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 570 tatttgccgggttgcctcaaacccatccatctctggcatttgaatatccat 620 |||||| | ||||||||||||||| |||||||||||||| |||| |||||| Sbjct: 561 tatttgtccggttgcctcaaacccgtccatctctggcatctgaacatccat 511 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 457 gcctggatgacatcggcagtcattgccag 485 |||||||| |||||||| ||||||||||| Sbjct: 680 gcctggataacatcggctgtcattgccag 652
>emb|AJ630372.1| Cucurbita maxima mRNA for putative histidine kinase, frame shifted splice variant Length = 4063 Score = 60.0 bits (30), Expect = 9e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 583 gcctcaaacccatccatctctggcatttgaatatccat 620 ||||||||||||||||| || ||||||||||||||||| Sbjct: 3456 gcctcaaacccatccatttcaggcatttgaatatccat 3419
>emb|AJ628045.1| Cucurbita maxima mRNA for putative histidine kinase Length = 3926 Score = 60.0 bits (30), Expect = 9e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 583 gcctcaaacccatccatctctggcatttgaatatccat 620 ||||||||||||||||| || ||||||||||||||||| Sbjct: 3319 gcctcaaacccatccatttcaggcatttgaatatccat 3282
>gb|DQ424897.1| Striga asiatica histidine kinase SHK278 mRNA, complete cds Length = 3009 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 580 gttgcctcaaacccatccatctctggcatttgaatatccat 620 ||||| |||||||| |||||||| ||||||||||||||||| Sbjct: 2747 gttgcttcaaacccgtccatctccggcatttgaatatccat 2707 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 457 gcctggatgacatcggcagtcattgccag 485 |||||||||||||| |||||||| ||||| Sbjct: 2879 gcctggatgacatcagcagtcatggccag 2851
>ref|NM_126244.2| Arabidopsis thaliana WOL (CYTOKININ RESPONSE 1) AT2G01830 (WOL) transcript variant AT2G01830.1 mRNA, complete cds Length = 3637 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 580 gttgcctcaaacccatccatctctggcatttgaatatccat 620 ||||| ||||| || ||||||| |||||||||||||||||| Sbjct: 3088 gttgcttcaaatccgtccatctgtggcatttgaatatccat 3048
>ref|NM_179594.1| Arabidopsis thaliana WOL (CYTOKININ RESPONSE 1) AT2G01830 (WOL) transcript variant AT2G01830.2 mRNA, complete cds Length = 3658 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 580 gttgcctcaaacccatccatctctggcatttgaatatccat 620 ||||| ||||| || ||||||| |||||||||||||||||| Sbjct: 3089 gttgcttcaaatccgtccatctgtggcatttgaatatccat 3049
>ref|NM_201667.1| Arabidopsis thaliana WOL (CYTOKININ RESPONSE 1) AT2G01830 (WOL) transcript variant AT2G01830.3 mRNA, complete cds Length = 3654 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 580 gttgcctcaaacccatccatctctggcatttgaatatccat 620 ||||| ||||| || ||||||| |||||||||||||||||| Sbjct: 3085 gttgcttcaaatccgtccatctgtggcatttgaatatccat 3045
>emb|AJ278530.1|ATH278530 Arabidopsis thaliana mRNA for putative histidine kinase receptor (wol gene), splice variant 3 Length = 3612 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 580 gttgcctcaaacccatccatctctggcatttgaatatccat 620 ||||| ||||| || ||||||| |||||||||||||||||| Sbjct: 3085 gttgcttcaaatccgtccatctgtggcatttgaatatccat 3045
>emb|AJ278529.1|ATH278529 Arabidopsis thaliana mRNA for putative histidine kinase receptor (wol gene), splice variant 2 Length = 3503 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 580 gttgcctcaaacccatccatctctggcatttgaatatccat 620 ||||| ||||| || ||||||| |||||||||||||||||| Sbjct: 2976 gttgcttcaaatccgtccatctgtggcatttgaatatccat 2936
>emb|AJ278528.1|ATH278528 Arabidopsis thaliana mRNA for putative histidine kinase receptor (wol gene), splice variant 1 Length = 3620 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 580 gttgcctcaaacccatccatctctggcatttgaatatccat 620 ||||| ||||| || ||||||| |||||||||||||||||| Sbjct: 3093 gttgcttcaaatccgtccatctgtggcatttgaatatccat 3053
>gb|DQ232601.1| Receiver Vector p415-CYC1-CRE1a-TR-SSRE-GFP, complete sequence Length = 11482 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 580 gttgcctcaaacccatccatctctggcatttgaatatccat 620 ||||| ||||| || ||||||| |||||||||||||||||| Sbjct: 2350 gttgcttcaaatccgtccatctgtggcatttgaatatccat 2390
>gb|DQ232600.1| Receiver Vector p415-CYC1-CRE1a-SSRE-GFP, complete sequence Length = 11442 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 580 gttgcctcaaacccatccatctctggcatttgaatatccat 620 ||||| ||||| || ||||||| |||||||||||||||||| Sbjct: 2310 gttgcttcaaatccgtccatctgtggcatttgaatatccat 2350
>dbj|AB046871.1| Arabidopsis thaliana AHK4 mRNA for histidine kinase, complete cds Length = 3243 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 580 gttgcctcaaacccatccatctctggcatttgaatatccat 620 ||||| ||||| || ||||||| |||||||||||||||||| Sbjct: 3023 gttgcttcaaatccgtccatctgtggcatttgaatatccat 2983
>dbj|AB049935.1| Arabidopsis thaliana mRNA for cytokinin receptor CRE1b, complete cds Length = 3694 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 580 gttgcctcaaacccatccatctctggcatttgaatatccat 620 ||||| ||||| || ||||||| |||||||||||||||||| Sbjct: 3091 gttgcttcaaatccgtccatctgtggcatttgaatatccat 3051
>dbj|AB049934.1| Arabidopsis thaliana mRNA for cytokinin receptor CRE1a, complete cds Length = 3649 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 580 gttgcctcaaacccatccatctctggcatttgaatatccat 620 ||||| ||||| || ||||||| |||||||||||||||||| Sbjct: 3054 gttgcttcaaatccgtccatctgtggcatttgaatatccat 3014
>gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome Length = 4607203 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 592 ccatccatctctggcatttgaatatccatta 622 |||||||| || ||||||||||||||||||| Sbjct: 2876219 ccatccatgtccggcatttgaatatccatta 2876189
>ref|NM_196042.1| Oryza sativa (japonica cultivar-group) putative histidine kinase (OSJNBa0073L01.1), mRNA Length = 3161 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 586 tcaaacccatccatctctggcatttgaatatccat 620 ||||||||||||||||| ||||| |||| |||||| Sbjct: 2567 tcaaacccatccatctcaggcatctgaacatccat 2533
>gb|AE017128.1| Yersinia pestis biovar Medievalis str. 91001 section 2 of 16 of the complete genome Length = 290803 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 592 ccatccatctctggcatttgaatatccatta 622 ||||| || |||||||||||||||||||||| Sbjct: 27649 ccatcgatttctggcatttgaatatccatta 27679
>gb|AE009952.1| Yersinia pestis KIM, complete genome Length = 4600755 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 592 ccatccatctctggcatttgaatatccatta 622 ||||| || |||||||||||||||||||||| Sbjct: 904988 ccatcgatttctggcatttgaatatccatta 905018
>gb|AC141922.19| Medicago truncatula clone mth2-9n11, complete sequence Length = 107448 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 590 acccatccatctctggcatttgaatatccat 620 |||| ||||| |||||||||||||||||||| Sbjct: 53589 acccgtccatttctggcatttgaatatccat 53559
>gb|AC144931.29| Medicago truncatula clone mth2-22b18, complete sequence Length = 122819 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 590 acccatccatctctggcatttgaatatccat 620 |||| ||||| |||||||||||||||||||| Sbjct: 25124 acccgtccatttctggcatttgaatatccat 25094
>gb|U00096.2| Escherichia coli K-12 MG1655, complete genome Length = 4639675 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 592 ccatccatctctggcatttgaatatccatta 622 |||||||| || ||||||||||||||||||| Sbjct: 2915255 ccatccatgtccggcatttgaatatccatta 2915225
>emb|CR932957.2| Medicago truncatula chromosome 5 clone mth2-58c3, COMPLETE SEQUENCE Length = 136080 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 590 acccatccatctctggcatttgaatatccat 620 |||||||||| |||||||||||||| ||||| Sbjct: 4270 acccatccatttctggcatttgaatgtccat 4300
>emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, complete sequence Length = 4744671 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 592 ccatccatctctggcatttgaatatccatta 622 ||||| || |||||||||||||||||||||| Sbjct: 902585 ccatcgatttctggcatttgaatatccatta 902615
>emb|AJ414156.1| Yersinia pestis strain CO92 complete genome; segment 16/20 Length = 220050 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 592 ccatccatctctggcatttgaatatccatta 622 ||||| || |||||||||||||||||||||| Sbjct: 193562 ccatcgatttctggcatttgaatatccatta 193532
>gb|AY092025.1| Catharanthus roseus cytokinin receptor (CKR1) mRNA, complete cds Length = 4040 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 586 tcaaacccatccatctctggcatttgaatatccat 620 |||||||| ||||| ||||||||||||| |||||| Sbjct: 2933 tcaaacccgtccatttctggcatttgaagatccat 2899
>dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome Length = 4646332 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 592 ccatccatctctggcatttgaatatccatta 622 |||||||| || ||||||||||||||||||| Sbjct: 2915889 ccatccatgtccggcatttgaatatccatta 2915859
>gb|AC170800.5| Medicago truncatula clone mth2-32n7, complete sequence Length = 99712 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 590 acccatccatctctggcatttgaatatccat 620 |||| ||||| |||||||||||||||||||| Sbjct: 43107 acccgtccatttctggcatttgaatatccat 43077
>gb|AC146785.12| Medicago truncatula clone mth2-4h4, complete sequence Length = 149005 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 590 acccatccatctctggcatttgaatatccat 620 |||||||||| |||||||||||||| ||||| Sbjct: 8426 acccatccatttctggcatttgaatgtccat 8396
>gb|AC142094.12| Medicago truncatula clone mth2-34h6, complete sequence Length = 151594 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 590 acccatccatctctggcatttgaatatccat 620 |||| ||||| |||||||||||||||||||| Sbjct: 126471 acccgtccatttctggcatttgaatatccat 126501
>gb|AC007069.6| Arabidopsis thaliana chromosome 2 clone T23K3 map mi320, complete sequence Length = 73009 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 590 acccatccatctctggcatttgaatatccat 620 |||| ||||||| |||||||||||||||||| Sbjct: 9848 acccgtccatctgtggcatttgaatatccat 9878
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 590 acccatccatctctggcatttgaatatccat 620 ||||||||||||||||||| |||| |||||| Sbjct: 30847100 acccatccatctctggcatctgaacatccat 30847070
>gb|AY216909.1| Vibrio parahaemolyticus opa operon, complete sequence Length = 5083 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 586 tcaaacccatccatctctggcatttgaatatccat 620 |||||||||| |||| |||||||||||| |||||| Sbjct: 4176 tcaaacccattcatcactggcatttgaacatccat 4142
>gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome Length = 4599354 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 592 ccatccatctctggcatttgaatatccatta 622 |||||||| || ||||||||||||||||||| Sbjct: 2870923 ccatccatgtccggcatttgaatatccatta 2870893
>dbj|AP005112.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0684F11 Length = 147731 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 590 acccatccatctctggcatttgaatatccat 620 ||||||||||||||||||| |||| |||||| Sbjct: 30677 acccatccatctctggcatctgaacatccat 30647
>emb|AJ298990.1|FSY298990 Fagus sylvatica partial mRNA for histidine kinase receptor (hkf1 gene), clone FsHKf1 Length = 744 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 586 tcaaacccatccatctctggcatttgaatatccat 620 |||||||||||||| || |||||||| |||||||| Sbjct: 612 tcaaacccatccatttccggcatttggatatccat 578
>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome Length = 5528445 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 592 ccatccatctctggcatttgaatatccatta 622 |||||||| || ||||||||||||||||||| Sbjct: 3706930 ccatccatgtcaggcatttgaatatccatta 3706900
>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome Length = 5498450 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 592 ccatccatctctggcatttgaatatccatta 622 |||||||| || ||||||||||||||||||| Sbjct: 3639632 ccatccatgtcaggcatttgaatatccatta 3639602
>gb|CP000034.1| Shigella dysenteriae Sd197, complete genome Length = 4369232 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 592 ccatccatctctggcatttgaatatccatta 622 |||||||| || ||||||||||||||||||| Sbjct: 2773208 ccatccatgtccggcatttgaatatccatta 2773178
>gb|CP000036.1| Shigella boydii Sb227, complete genome Length = 4519823 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 592 ccatccatctctggcatttgaatatccatta 622 |||||||| || ||||||||||||||||||| Sbjct: 2673946 ccatccatgtccggcatttgaatatccatta 2673916
>gb|CP000038.1| Shigella sonnei Ss046, complete genome Length = 4825265 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 592 ccatccatctctggcatttgaatatccatta 622 |||||||| || ||||||||||||||||||| Sbjct: 3086960 ccatccatgtcaggcatttgaatatccatta 3086930
>dbj|D10888.1|ECOBARA E.coli barA gene for sensor-regulator protein Length = 3060 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 592 ccatccatctctggcatttgaatatccatta 622 |||||||| || ||||||||||||||||||| Sbjct: 2290 ccatccatgtccggcatttgaatatccatta 2260
>gb|AE004291.1| Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, section 199 of 251 of the complete chromosome Length = 10563 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 592 ccatccatctctggcatttgaatatc 617 ||||||||||||||||||| |||||| Sbjct: 8902 ccatccatctctggcatttcaatatc 8927
>dbj|BA000038.2| Vibrio vulnificus YJ016 DNA, chromosome II, complete sequence Length = 1857073 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 592 ccatccatctctggcatttgaatatc 617 ||||||||||||||||| |||||||| Sbjct: 725766 ccatccatctctggcatatgaatatc 725741 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 592 ccatccatctctggcatttgaatatccat 620 ||||||||| ||||||||||||| ||||| Sbjct: 1576259 ccatccatcactggcatttgaatgtccat 1576231
>gb|DQ381152.1| Bos taurus BTA17 39037 genomic sequence contig containing highly polymorphic single nucleotide sites Length = 67848 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 295 gtttctcccagtcaatgtacac 316 |||||||||||||||||||||| Sbjct: 20785 gtttctcccagtcaatgtacac 20764 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 295 gtttctcccagtcaatgtacac 316 |||||||||||||||||||||| Sbjct: 20740 gtttctcccagtcaatgtacac 20719 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 295 gtttctcccagtcaatgtacac 316 |||||||||||||||||||||| Sbjct: 20695 gtttctcccagtcaatgtacac 20674
>gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chromosome I, complete sequence Length = 4332241 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 590 acccatccatctctggcatttg 611 |||||||||||||||||||||| Sbjct: 1737781 acccatccatctctggcatttg 1737760
>gb|AE016796.1| Vibrio vulnificus CMCP6 chromosome II, complete sequence Length = 1844853 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 592 ccatccatctctggcatttgaatatc 617 ||||||||||||||||| |||||||| Sbjct: 147122 ccatccatctctggcatatgaatatc 147097 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 592 ccatccatctctggcatttgaatatccat 620 ||||||||| ||||||||||||| ||||| Sbjct: 1009280 ccatccatcactggcatttgaatgtccat 1009252
>gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130, chromosome I, complete sequence Length = 4277185 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 590 acccatccatctctggcatttg 611 |||||||||||||||||||||| Sbjct: 2492406 acccatccatctctggcatttg 2492427
>ref|XM_637136.1| Dictyostelium discoideum histidine kinase (DDB0215358), partial mRNA Length = 5910 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Minus Query: 586 tcaaacccatccatctctggcatttgaatatccatta 622 ||||| |||||||| |||||||||||| |||||||| Sbjct: 5696 tcaaatccatccatttctggcatttgacaatccatta 5660
>gb|AC146611.2| Mus musculus BAC clone RP23-57A17 from chromosome 5, complete sequence Length = 194487 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 586 tcaaacccatccatctctggc 606 ||||||||||||||||||||| Sbjct: 57903 tcaaacccatccatctctggc 57883
>emb|CR812847.5| Zebrafish DNA sequence from clone DKEY-9I15 in linkage group 14, complete sequence Length = 230522 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 364 aagaacttctgcactgccttg 384 ||||||||||||||||||||| Sbjct: 168938 aagaacttctgcactgccttg 168918
>ref|XM_447508.1| Candida glabrata CBS138 hypothetical protein (CAGL0I05940g) partial mRNA Length = 882 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 363 caagaacttctgcactgccttgaacaact 391 ||||||||||||||| |||||||||||| Sbjct: 435 caagaacttctgcacatccttgaacaact 407
>gb|CP000302.1| Shewanella denitrificans OS217, complete genome Length = 4545906 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 592 ccatccatctctggcatttgaatatccat 620 ||||||||| ||||||||||||| ||||| Sbjct: 612527 ccatccatcactggcatttgaatgtccat 612499
>emb|CR380955.1| Candida glabrata strain CBS138 chromosome I complete sequence Length = 1089401 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 363 caagaacttctgcactgccttgaacaact 391 ||||||||||||||| |||||||||||| Sbjct: 566291 caagaacttctgcacatccttgaacaact 566319
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 591 cccatccatctctggcatttgaatatcca 619 |||||||| |||||||||||| ||||||| Sbjct: 519604 cccatccacctctggcatttgcatatcca 519632
>gb|AC151956.5| Medicago truncatula clone mth2-52p17, complete sequence Length = 120704 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 580 gttgcctcaaacccatccatctctggcat 608 |||||||||||||||||| || ||||||| Sbjct: 108782 gttgcctcaaacccatccttcactggcat 108810
>gb|AF024654.1|AF024654 Dictyostelium discoideum hybrid histidine kinase DHKB (dhkB) gene, complete cds Length = 7133 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Minus Query: 586 tcaaacccatccatctctggcatttgaatatccatta 622 ||||| |||||||| |||||||||||| |||||||| Sbjct: 6834 tcaaatccatccatttctggcatttgacaatccatta 6798
>gb|AC129600.4| Mus musculus BAC clone RP23-361D7 from chromosome 5, complete sequence Length = 223491 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 586 tcaaacccatccatctctggc 606 ||||||||||||||||||||| Sbjct: 88997 tcaaacccatccatctctggc 89017
>dbj|BA000031.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 1, complete sequence Length = 3288558 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 580 gttgcctcaaacccatccatc 600 ||||||||||||||||||||| Sbjct: 1872557 gttgcctcaaacccatccatc 1872537
>ref|XM_345899.2| PREDICTED: Rattus norvegicus melatonin receptor 1B (Mtnr1b), mRNA Length = 1860 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 433 ttctttgtgcattcctcatgg 453 ||||||||||||||||||||| Sbjct: 589 ttctttgtgcattcctcatgg 569
>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome Length = 2593857 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 592 ccatccatctctggcatttgaatatccat 620 ||||||||||| |||||||| |||||||| Sbjct: 890906 ccatccatctccggcatttgcatatccat 890934
>emb|BX005228.7| Zebrafish DNA sequence from clone CH211-163M17 in linkage group 14, complete sequence Length = 171037 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 364 aagaacttctgcactgccttg 384 ||||||||||||||||||||| Sbjct: 56003 aagaacttctgcactgccttg 56023
>gb|AY600439.1| Lycopersicon esculentum ethylene receptor neverripe (ETR5) gene, complete cds Length = 5166 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 592 ccatccatctctggcatttgaatatcca 619 |||||||| ||||||||||||| ||||| Sbjct: 4958 ccatccatttctggcatttgaagatcca 4931
>ref|XM_639569.1| Dictyostelium discoideum histidine kinase (DDB0185039), partial mRNA Length = 5211 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 603 tggcatttgaatatccatta 622 |||||||||||||||||||| Sbjct: 4827 tggcatttgaatatccatta 4808
>ref|XM_639498.1| Dictyostelium discoideum histidine kinase DhkI (DDB0217151), partial mRNA Length = 5211 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 603 tggcatttgaatatccatta 622 |||||||||||||||||||| Sbjct: 4827 tggcatttgaatatccatta 4808
>gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, complete sequence Length = 4837408 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 531 tgaattatcaccattatgtgcctt 554 ||||||||||||||||||| |||| Sbjct: 3523741 tgaattatcaccattatgttcctt 3523764
>ref|XR_001629.1| PREDICTED: Mus musculus cDNA sequence BC067074 (BC067074), misc RNA Length = 8162 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 448 tcatgggtggcctggatgac 467 |||||||||||||||||||| Sbjct: 971 tcatgggtggcctggatgac 990
>ref|XR_004508.1| PREDICTED: Mus musculus cDNA sequence BC067074 (BC067074), misc RNA Length = 8042 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 448 tcatgggtggcctggatgac 467 |||||||||||||||||||| Sbjct: 1028 tcatgggtggcctggatgac 1047
>gb|AC124494.4| Mus musculus BAC clone RP23-464P12 from chromosome 13, complete sequence Length = 204177 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 448 tcatgggtggcctggatgac 467 |||||||||||||||||||| Sbjct: 106620 tcatgggtggcctggatgac 106639
>gb|AC112157.4| Mus musculus BAC clone RP24-103F14 from chromosome 13, complete sequence Length = 155757 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 448 tcatgggtggcctggatgac 467 |||||||||||||||||||| Sbjct: 148095 tcatgggtggcctggatgac 148076
>gb|AC122337.4| Mus musculus BAC clone RP23-351M10 from chromosome 12, complete sequence Length = 196396 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 382 ttgaacaactgcttctcctc 401 |||||||||||||||||||| Sbjct: 110168 ttgaacaactgcttctcctc 110187
>gb|AC123714.6| Mus musculus chromosome 9, clone RP23-393E20, complete sequence Length = 217860 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 597 catctctggcatttgaatat 616 |||||||||||||||||||| Sbjct: 29946 catctctggcatttgaatat 29965
>gb|AE014075.1| Escherichia coli CFT073, complete genome Length = 5231428 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 595 tccatctctggcatttgaatatccatta 622 ||||| || ||||||||||||||||||| Sbjct: 3192048 tccatgtccggcatttgaatatccatta 3192021
>gb|CP000243.1| Escherichia coli UTI89, complete genome Length = 5065741 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 595 tccatctctggcatttgaatatccatta 622 ||||| || ||||||||||||||||||| Sbjct: 3071687 tccatgtccggcatttgaatatccatta 3071660
>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome Length = 5373180 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 592 ccatccatctctggcatttgaatatcca 619 |||||||| || |||||||||||||||| Sbjct: 4720253 ccatccatttcgggcatttgaatatcca 4720280
>emb|BX571865.1| Photorhabdus luminescens subsp. laumondii TTO1 complete genome; segment 7/17 Length = 348813 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 600 ctctggcatttgaatatcca 619 |||||||||||||||||||| Sbjct: 13853 ctctggcatttgaatatcca 13834
>dbj|BA000032.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 2, complete sequence Length = 1877212 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 588 aaacccatccatctctggcatttg 611 ||||||||||||| |||||||||| Sbjct: 10143 aaacccatccatcactggcatttg 10120
>gb|AC157474.2| Mus musculus BAC clone RP24-565B5 from chromosome 9, complete sequence Length = 192701 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 597 catctctggcatttgaatat 616 |||||||||||||||||||| Sbjct: 93077 catctctggcatttgaatat 93058
>gb|AF362371.1|AF362371 Dictyostelium discoideum histidine kinase DhkI (dhkI) gene, complete cds Length = 6074 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 603 tggcatttgaatatccatta 622 |||||||||||||||||||| Sbjct: 5066 tggcatttgaatatccatta 5047
>gb|AC116330.2| Dictyostelium discoideum chromosome 2 map 3191214-3323468 strain AX4, complete sequence Length = 132254 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 603 tggcatttgaatatccatta 622 |||||||||||||||||||| Sbjct: 38774 tggcatttgaatatccatta 38793
>gb|AC137517.6| Homo sapiens 3 BAC RP11-671N3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 105622 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 432 attctttgtgcattcctcatgggt 455 ||||||||||| |||||||||||| Sbjct: 58558 attctttgtgccttcctcatgggt 58535
>gb|AC063943.23| Homo sapiens 12 BAC RP11-18C24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 137242 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 288 agtcagagtttctcccagtcaatg 311 ||||||| |||||||||||||||| Sbjct: 14817 agtcagattttctcccagtcaatg 14840
>gb|AE014299.1| Shewanella oneidensis MR-1, complete genome Length = 4969803 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 595 tccatctctggcatttgaatatccatta 622 |||||| ||||||| ||||||||||||| Sbjct: 602742 tccatcactggcatctgaatatccatta 602715
>gb|AF118844.1|AF118844 Lycopersicon esculentum ethylene receptor homolog (ETR5) mRNA, complete cds Length = 3370 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 592 ccatccatctctggcatttgaatatcca 619 |||||||| ||||||||||||| ||||| Sbjct: 2776 ccatccatttctggcatttgaagatcca 2749
>emb|BX537644.1|HSM806477 Homo sapiens mRNA; cDNA DKFZp686M1498 (from clone DKFZp686M1498) Length = 3587 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 288 agtcagagtttctcccagtcaatg 311 ||||||| |||||||||||||||| Sbjct: 1949 agtcagattttctcccagtcaatg 1926 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,451,214 Number of Sequences: 3902068 Number of extensions: 4451214 Number of successful extensions: 80966 Number of sequences better than 10.0: 96 Number of HSP's better than 10.0 without gapping: 96 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 80233 Number of HSP's gapped (non-prelim): 733 length of query: 622 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 599 effective length of database: 17,143,297,704 effective search space: 10268835324696 effective search space used: 10268835324696 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
