ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal4g21 |
|---|---|
| Clone Library Name | barley_pub |
>PSA5_ORYSA (Q9LSU1) Proteasome subunit alpha type 5 (EC 3.4.25.1) (20S| proteasome alpha subunit E) (20S proteasome subunit alpha-5) Length = 237 Score = 97.1 bits (240), Expect = 4e-20 Identities = 49/53 (92%), Positives = 51/53 (96%) Frame = -3 Query: 675 KELTIAEAETIALSILKQVMEEKVTPNNVDIANVSPSYHLYTPAEVEAVIARL 517 KELT+ EAETIALSILKQVMEEKVTPNNVDIA VSP+YHLYTPAEVEAVIARL Sbjct: 185 KELTLQEAETIALSILKQVMEEKVTPNNVDIAKVSPNYHLYTPAEVEAVIARL 237
>PSA5_SOYBN (Q9M4T8) Proteasome subunit alpha type 5 (EC 3.4.25.1) (20S| proteasome alpha subunit E) (20S proteasome subunit alpha-5) Length = 237 Score = 92.4 bits (228), Expect = 1e-18 Identities = 45/53 (84%), Positives = 51/53 (96%) Frame = -3 Query: 675 KELTIAEAETIALSILKQVMEEKVTPNNVDIANVSPSYHLYTPAEVEAVIARL 517 K+LT+ EAETIALSILKQVMEEKVTPNNVDIA V+P+YHLYTP+EVEAVI+RL Sbjct: 185 KDLTLQEAETIALSILKQVMEEKVTPNNVDIAKVAPTYHLYTPSEVEAVISRL 237
>PSA5A_ARATH (O81149) Proteasome subunit alpha type 5-A (EC 3.4.25.1) (20S| proteasome alpha subunit E-1) Length = 237 Score = 90.1 bits (222), Expect = 5e-18 Identities = 44/53 (83%), Positives = 50/53 (94%) Frame = -3 Query: 675 KELTIAEAETIALSILKQVMEEKVTPNNVDIANVSPSYHLYTPAEVEAVIARL 517 K+L++ EAETIA+SILKQVMEEKVTPNNVDIA V+P+YHLYTP EVEAVIARL Sbjct: 185 KDLSLQEAETIAVSILKQVMEEKVTPNNVDIAKVAPAYHLYTPQEVEAVIARL 237
>PSA5B_ARATH (Q42134) Proteasome subunit alpha type 5-B (EC 3.4.25.1) (20S| proteasome alpha subunit E-2) (Proteasome component Z) Length = 237 Score = 89.7 bits (221), Expect = 7e-18 Identities = 43/53 (81%), Positives = 50/53 (94%) Frame = -3 Query: 675 KELTIAEAETIALSILKQVMEEKVTPNNVDIANVSPSYHLYTPAEVEAVIARL 517 K++T+ EAETIA+SILKQVMEEKVTPNNVDIA V+P+YHLYTP EVEAVI+RL Sbjct: 185 KDITLQEAETIAVSILKQVMEEKVTPNNVDIAKVAPAYHLYTPQEVEAVISRL 237
>PSA5_MOUSE (Q9Z2U1) Proteasome subunit alpha type 5 (EC 3.4.25.1) (Proteasome| zeta chain) (Macropain zeta chain) (Multicatalytic endopeptidase complex zeta chain) Length = 241 Score = 48.5 bits (114), Expect = 2e-05 Identities = 24/52 (46%), Positives = 36/52 (69%), Gaps = 2/52 (3%) Frame = -3 Query: 675 KELTIAEAETIALSILKQVMEEKVTPNNVDIANVSP--SYHLYTPAEVEAVI 526 K +T+ EA +L ILKQVMEEK+ N+++A V P ++H++T E+E VI Sbjct: 187 KSMTLKEAIKSSLIILKQVMEEKLNATNIELATVQPGQNFHMFTKEELEEVI 238
>PSA5_HUMAN (P28066) Proteasome subunit alpha type 5 (EC 3.4.25.1) (Proteasome| zeta chain) (Macropain zeta chain) (Multicatalytic endopeptidase complex zeta chain) Length = 241 Score = 48.5 bits (114), Expect = 2e-05 Identities = 24/52 (46%), Positives = 36/52 (69%), Gaps = 2/52 (3%) Frame = -3 Query: 675 KELTIAEAETIALSILKQVMEEKVTPNNVDIANVSP--SYHLYTPAEVEAVI 526 K +T+ EA +L ILKQVMEEK+ N+++A V P ++H++T E+E VI Sbjct: 187 KSMTLKEAIKSSLIILKQVMEEKLNATNIELATVQPGQNFHMFTKEELEEVI 238
>PSA5_SCHPO (Q9UT97) Probable proteasome subunit alpha type 5 (EC 3.4.25.1)| Length = 247 Score = 47.4 bits (111), Expect = 4e-05 Identities = 22/54 (40%), Positives = 35/54 (64%), Gaps = 2/54 (3%) Frame = -3 Query: 675 KELTIAEAETIALSILKQVMEEKVTPNNVDIANVSP--SYHLYTPAEVEAVIAR 520 K++T+ EAE + L +L+QVMEEK+ NV +A V+ +H+Y E+ +AR Sbjct: 188 KDMTLEEAEVLILKVLRQVMEEKLDSKNVQLAKVTAEGGFHIYNDEEMADAVAR 241
>PSA5_RAT (P34064) Proteasome subunit alpha type 5 (EC 3.4.25.1) (Proteasome| zeta chain) (Macropain zeta chain) (Multicatalytic endopeptidase complex zeta chain) Length = 241 Score = 47.4 bits (111), Expect = 4e-05 Identities = 24/52 (46%), Positives = 35/52 (67%), Gaps = 2/52 (3%) Frame = -3 Query: 675 KELTIAEAETIALSILKQVMEEKVTPNNVDIANVSP--SYHLYTPAEVEAVI 526 K T+ EA +L ILKQVMEEK+ N+++A V P ++H++T E+E VI Sbjct: 187 KSTTLKEAIKSSLIILKQVMEEKLNATNIELATVQPGQNFHMFTKEELEEVI 238
>PSA5_ENTHI (Q94561) Proteasome subunit alpha type 5 (EC 3.4.25.1)| Length = 247 Score = 42.7 bits (99), Expect = 0.001 Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 3/56 (5%) Frame = -3 Query: 675 KELTIAEAETIALSILKQVMEEKVTPNNVDIANVS---PSYHLYTPAEVEAVIARL 517 K +T+ EAE +ALS LKQVMEEK+ NV++A V+ + + A +E +I + Sbjct: 187 KSMTLREAEILALSTLKQVMEEKLNSKNVEVALVTVEKKKFEIMDTAFIENLIGEI 242
>PSA5_TRYBB (Q9XZG5) Proteasome subunit alpha type 5 (EC 3.4.25.1) (20S| proteasome subunit alpha-5) Length = 246 Score = 41.6 bits (96), Expect = 0.002 Identities = 21/55 (38%), Positives = 35/55 (63%), Gaps = 3/55 (5%) Frame = -3 Query: 675 KELTIAEAETIALSILKQVMEEKVTPNNVDIANVSPS---YHLYTPAEVEAVIAR 520 + +T+ EAE + + IL+QVMEEK+T +V+IA V S +Y +++ +I R Sbjct: 187 RNMTVEEAENLTVQILRQVMEEKLTKTSVEIAIVPVSTGRLQIYDQEQIQRIIDR 241
>PSA5_DROME (Q95083) Proteasome subunit alpha type 5 (EC 3.4.25.1)| Length = 244 Score = 40.4 bits (93), Expect = 0.005 Identities = 21/54 (38%), Positives = 35/54 (64%), Gaps = 2/54 (3%) Frame = -3 Query: 672 ELTIAEAETIALSILKQVMEEKVTPNNVDIANVSP--SYHLYTPAEVEAVIARL 517 +LT+ EA I+L+ LKQVMEEK+ NV++ ++ ++++T EVE I + Sbjct: 190 DLTLDEAIDISLNTLKQVMEEKLNSTNVEVMTMTKEREFYMFTKEEVEQHIKNI 243
>PSA5_CAEEL (Q95008) Proteasome subunit alpha type 5 (EC 3.4.25.1) (Proteasome| subunit alpha 5) Length = 248 Score = 37.7 bits (86), Expect = 0.032 Identities = 18/35 (51%), Positives = 25/35 (71%) Frame = -3 Query: 669 LTIAEAETIALSILKQVMEEKVTPNNVDIANVSPS 565 LTI E +AL+ILKQVMEEK+ NV++ + P+ Sbjct: 188 LTIKEGLKMALAILKQVMEEKLNSANVEVVVIKPT 222
>PSA5_YEAST (P32379) Proteasome component PUP2 (EC 3.4.25.1) (Macropain subunit| PUP2) (Proteinase YSCE subunit PUP2) (Multicatalytic endopeptidase complex subunit PUP2) Length = 260 Score = 37.7 bits (86), Expect = 0.032 Identities = 17/33 (51%), Positives = 24/33 (72%) Frame = -3 Query: 669 LTIAEAETIALSILKQVMEEKVTPNNVDIANVS 571 LT+ EAE + L ILKQVMEEK+ NN ++ ++ Sbjct: 191 LTLKEAELLVLKILKQVMEEKLDENNAQLSCIT 223
>SERA_BOVIN (Q5EAD2) D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) (3-PGDH)| Length = 532 Score = 31.2 bits (69), Expect = 3.0 Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 3/59 (5%) Frame = +1 Query: 436 AYENSDATTWQALLSLQEA---VSQSGNPSQPRDDRFNLCRSVEVVAGGDIRNVNIVWG 603 A + S+ A+L ++EA V+ S NP+ PR+ F C +AG + V +V G Sbjct: 381 ASQQSNVNLVNAMLLVKEAGLDVTTSHNPATPREQDFGECLLTVALAGAPYQAVGLVQG 439
>AMPM_MANSE (Q11001) Membrane alanyl aminopeptidase precursor (EC 3.4.11.-)| (Aminopeptidase N-like protein) (CryIA(C) receptor) (Fragment) Length = 990 Score = 30.0 bits (66), Expect = 6.7 Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 4/50 (8%) Frame = +1 Query: 415 NKRMTGLAYENSDATTW----QALLSLQEAVSQSGNPSQPRDDRFNLCRS 552 NK+++G N D TTW +AL S V + SQ DD F L RS Sbjct: 596 NKQVSGFYRVNYDNTTWGLITRALRSANRTVIHELSRSQIVDDVFQLARS 645
>HISX1_RHILO (Q989E7) Histidinol dehydrogenase 1 (EC 1.1.1.23) (HDH 1)| Length = 430 Score = 30.0 bits (66), Expect = 6.7 Identities = 15/57 (26%), Positives = 28/57 (49%) Frame = +1 Query: 391 VQRLSATVNKRMTGLAYENSDATTWQALLSLQEAVSQSGNPSQPRDDRFNLCRSVEV 561 ++ L V+K+ AYE +D +AL ++ + +P+DDR+ VE+ Sbjct: 61 LKSLGIAVSKQDIAAAYETADPKAIEALEFARDRIRSHHERQRPKDDRYTDATGVEL 117
>FUMC_BACHD (Q9KCX4) Fumarate hydratase class II (EC 4.2.1.2) (Fumarase C)| Length = 462 Score = 30.0 bits (66), Expect = 6.7 Identities = 12/30 (40%), Positives = 21/30 (70%) Frame = +1 Query: 382 FLVVQRLSATVNKRMTGLAYENSDATTWQA 471 F ++++ +A VNK++ L+ E +DA TW A Sbjct: 47 FALLKKAAANVNKKLGQLSAEKADAITWAA 76
>AMPN_PLUXY (P91887) Aminopeptidase N precursor (EC 3.4.11.2) (Microsomal| aminopeptidase) (APN1) Length = 946 Score = 29.6 bits (65), Expect = 8.8 Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 3/50 (6%) Frame = +1 Query: 412 VNKRMTGLAYENSDATTWQAL---LSLQEAVSQSGNPSQPRDDRFNLCRS 552 VNK+ TG N D W+AL L+ + N +Q DD FNL R+ Sbjct: 580 VNKQQTGYYRVNYDPENWRALAKVLNDTHEIIHLLNRAQLIDDSFNLARN 629 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 99,495,879 Number of Sequences: 219361 Number of extensions: 2097204 Number of successful extensions: 4404 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 4302 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4404 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6655306086 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
