Clone Information

BLAST Search Result

Clone Name	rbaal4g20
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	MAD14_ORYSA (Q7Y023) MADS-box transcription factor 14 (OsMADS14)...	125	9e-29
2	MAD15_ORYSA (Q6Q9I2) MADS-box transcription factor 15 (OsMADS15)...	89	2e-17
3	AGL8_SOLCO (O22328) Agamous-like MADS-box protein AGL8 homolog	76	1e-13
4	AGL8_SOLTU (Q42429) Agamous-like MADS-box protein AGL8 homolog (...	73	9e-13
5	AP1_SINAL (Q41276) Floral homeotic protein APETALA1 (MADS C)	69	2e-11
6	AP1_ARATH (P35631) Floral homeotic protein APETALA1 (Agamous-lik...	68	2e-11
7	AGL8_LYCES (Q40170) Agamous-like MADS-box protein AGL8 homolog (...	67	4e-11
8	CAL_ARATH (Q39081) Transcription factor CAULIFLOWER (Agamous-lik...	63	9e-10
9	MAD18_ORYSA (Q6Z4G0) MADS-box transcription factor 18 (OsMADS18)...	62	1e-09
10	AGL8_ARATH (Q38876) Agamous-like MADS-box protein AGL8 (Floral h...	54	6e-07
11	AGL8_SINAL (Q41274) Agamous-like MADS-box protein AGL8 homolog (...	53	7e-07
12	GGM13_GNEGN (Q9XGJ4) MADS-box protein GGM13	45	3e-04
13	AGL9_SINAL (O04067) Agamous-like MADS-box protein AGL9 homolog (...	45	3e-04
14	AGL9_PETHY (Q03489) Agamous-like MADS-box protein AGL9 homolog (...	44	3e-04
15	SEP3_ARATH (O22456) Developmental protein SEPALLATA3 (Agamous-li...	44	3e-04
16	MADS8_ORYSA (Q9SAR1) MADS-box transcription factor 8 (OsMADS8) (...	44	5e-04
17	MAD29_ORYSA (Q6H711) MADS-box transcription factor 29 (OsMADS29)	43	8e-04
18	MADS1_ORYSA (Q40700) MADS-box transcription factor 1 (OsMADS1) (...	43	8e-04
19	AGL9_LYCES (Q42464) Agamous-like MADS-box protein AGL9 homolog (...	43	0.001
20	MADS7_ORYSA (Q6Q9I1) MADS-box transcription factor 7 (OsMADS7) (...	42	0.001
21	M17_MAIZE (Q8VWM8) MADS-box protein ZMM17	42	0.002
22	MAD34_ORYSA (Q6Q9H6) MADS-box transcription factor 34 (OsMADS34)...	42	0.002
23	SOC1_ARATH (O64645) SUPPRESSOR OF CONSTANS OVEREXPRESSION 1 prot...	42	0.002
24	MADS3_ORYSA (Q40704) MADS-box transcription factor 3 (OsMADS3) (...	41	0.004
25	MAD17_ORYSA (Q7XUN2) MADS-box transcription factor 17 (OsMADS17)...	40	0.005
26	AGL19_ARATH (O82743) Agamous-like MADS-box protein AGL19	40	0.005
27	MADS6_ORYSA (Q6EU39) MADS-box transcription factor 6 (OsMADS6)	40	0.007
28	AGL14_ARATH (Q38838) Agamous-like MADS-box protein AGL14	40	0.007
29	MADS5_ORYSA (Q7GCP2) MADS-box transcription factor 5 (OsMADS5) (...	40	0.009
30	AP32_ASAEU (Q9LLA7) MADS-box protein AeAP3-2 (APETALA3-2) (Fragm...	39	0.015
31	AGL31_ARATH (Q9FPN7) Agamous-like MADS-box protein AGL31 (Protei...	39	0.019
32	AG_ARATH (P17839) Floral homeotic protein AGAMOUS	39	0.019
33	MAD58_ORYSA (Q2V0P1) MADS-box transcription factor 58 (OsMADS58)	38	0.032
34	TT16_ARATH (Q8RYD9) TRANSPARENT TESTA 16 protein (Arabidopsis BS...	37	0.042
35	AG_BRANA (Q01540) Floral homeotic protein AGAMOUS	37	0.042
36	FBP24_PETHY (Q9ATE5) MADS-box protein FBP24 (Floral binding prot...	37	0.055
37	FLC_ARATH (Q9S7Q7) FLOWERING LOCUS C protein (MADS-box protein F...	37	0.072
38	AG_PETHY (Q40885) Floral homeotic protein AGAMOUS (pMADS3)	37	0.072
39	MAD13_ORYSA (Q2QW53) MADS-box transcription factor 13 (OsMADS13)...	36	0.094
40	DEF21_ANTMA (Q8RVL4) MADS-box protein defh21 (DEFICIENS homolog 21)	36	0.094
41	AG_PANGI (Q40872) Floral homeotic protein AGAMOUS (GAG2)	36	0.094
42	AG_TOBAC (Q43585) Floral homeotic protein AGAMOUS (NAG1)	35	0.16
43	AG_LYCES (Q40168) Floral homeotic protein AGAMOUS (TAG1)	35	0.16
44	AGL1_ARATH (P29381) Agamous-like MADS-box protein AGL1 (Protein ...	34	0.36
45	MAD30_ORYSA (Q655V4) MADS-box transcription factor 30 (OsMADS30)	34	0.47
46	MAD26_ORYSA (Q8L887) MADS-box transcription factor 26 (OsMADS26)...	33	0.61
47	ZIC2_XENLA (Q91689) Zinc finger protein ZIC 2 (Zinc finger prote...	33	0.80
48	ZIC2_MOUSE (Q62520) Zinc finger protein ZIC 2 (Zinc finger prote...	33	1.0
49	ZIC2_HUMAN (O95409) Zinc finger protein ZIC 2 (Zinc finger prote...	33	1.0
50	MAD22_ORYSA (Q9XJ66) MADS-box transcription factor 22 (OsMADS22)	32	1.4
51	CK5P2_MOUSE (Q8K389) CDK5 regulatory subunit-associated protein ...	32	1.4
52	AGL15_ARATH (Q38847) Agamous-like MADS-box protein AGL15	32	1.8
53	PRGR_RABIT (P06186) Progesterone receptor (PR)	32	1.8
54	TRIPB_HUMAN (Q15643) Thyroid receptor-interacting protein 11 (TR...	31	4.0
55	MYC_DROME (Q9W4S7) Myc protein (dMyc1) (dMyc) (Diminutive protein)	31	4.0
56	CCD11_HUMAN (Q96M91) Coiled-coil domain-containing protein 11	30	5.2
57	ZIC1_XENLA (O73689) Zinc finger protein ZIC 1 (Zinc finger prote...	30	5.2
58	PHLB1_HUMAN (Q86UU1) Pleckstrin homology-like domain family B me...	30	6.7
59	ROCK1_PANTR (P61584) Rho-associated protein kinase 1 (EC 2.7.11....	30	6.7
60	PALA_DEBHA (Q6BLT2) pH-response regulator protein palA/RIM20	30	6.7
61	MAD55_ORYSA (Q69TG5) MADS-box transcription factor 55 (OsMADS55)	30	6.7
62	NPHP3_XENLA (Q6AZT7) Nephrocystin-3	30	6.7
63	KIFC1_HUMAN (Q9BW19) Kinesin-like protein KIFC1 (Kinesin-like pr...	30	6.7
64	VGP3_EBV (P03200) Envelope glycoprotein GP340/GP220 (Membrane an...	30	6.7
65	ROCK1_RABIT (O77819) Rho-associated protein kinase 1 (EC 2.7.11....	30	6.7
66	ROCK1_MOUSE (P70335) Rho-associated protein kinase 1 (EC 2.7.11....	30	6.7
67	ROCK1_HUMAN (Q13464) Rho-associated protein kinase 1 (EC 2.7.11....	30	6.7
68	INCE_HUMAN (Q9NQS7) Inner centromere protein	30	6.7
69	TPR_HUMAN (P12270) Nucleoprotein TPR	30	6.7
70	VGP3_EBVP3 (P68344) Envelope glycoprotein GP340 (Membrane antige...	30	6.7
71	VGP3_EBVA8 (P68343) Envelope glycoprotein GP340 (Membrane antige...	30	6.7
72	FOSL2_CHICK (P18625) Fos-related antigen 2	30	6.7
73	SYF2_MAGGR (Q521C0) Pre-mRNA-splicing factor SYF2	30	8.8
74	AP3D1_MOUSE (O54774) AP-3 complex subunit delta-1 (Adapter-relat...	30	8.8
75	TPR1_SCHPO (O42668) Tetratricopeptide repeat protein 1	30	8.8

>MAD14_ORYSA (Q7Y023) MADS-box transcription factor 14 (OsMADS14) (Protein|
           APETALA1-like B) (Protein AGAMOUS-like 10) (FDRMADS6)
           (RMADS211)
          Length = 246

 Score =  125 bits (315), Expect = 9e-29
 Identities = 70/117 (59%), Positives = 81/117 (69%), Gaps = 2/117 (1%)
 Frame = -2

Query: 676 QQLXSSLKHIRARKNQLMHESISELQKKERSLQEENKVLQKELVEKQKXXXXXX--XXXX 503
           QQL +SLKHIR+RK+QLM ESI+ELQ+KE+SLQEENKVLQKELVEKQK            
Sbjct: 130 QQLENSLKHIRSRKSQLMLESINELQRKEKSLQEENKVLQKELVEKQKVQKQQVQWDQTQ 189

Query: 502 XXXXXXXXSFMMRDAPPVADTSNHPAAAGERAEDVAVQPQVPLRTALPLWMVSHING 332
                   SFMMR+A P  + SN+PAAAGER EDVA      +R  LP WM+SHING
Sbjct: 190 PQTSSSSSSFMMREALPTTNISNYPAAAGERIEDVAAGQPQHVRIGLPPWMLSHING 246

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>MAD15_ORYSA (Q6Q9I2) MADS-box transcription factor 15 (OsMADS15) (Protein|
           APETALA1-like A) (FDRMADS3) (RMADS215)
          Length = 267

 Score = 88.6 bits (218), Expect = 2e-17
 Identities = 64/137 (46%), Positives = 71/137 (51%), Gaps = 23/137 (16%)
 Frame = -2

Query: 676 QQLXSSLKHIRARKNQLMHESISELQKKERSLQEENKVLQKELVEKQK------------ 533
           QQL SSLKHI +RK+ LM ESISELQKKERSLQEENK LQKELVE+QK            
Sbjct: 130 QQLESSLKHIISRKSHLMLESISELQKKERSLQEENKALQKELVERQKNVRGQQQVGQWD 189

Query: 532 --XXXXXXXXXXXXXXXXXXSFMMRDAPPVADTSN---HPAAAGER-----AEDVAVQPQ 383
                               S M+RD   +    N    P   GER     A  VA Q Q
Sbjct: 190 QTQVQAQAQAQPQAQTSSSSSSMLRDQQALLPPQNICYPPVMMGERNDAAAAAAVAAQGQ 249

Query: 382 VPLRT-ALPLWMVSHIN 335
           V LR   LP WM+SH+N
Sbjct: 250 VQLRIGGLPPWMLSHLN 266

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>AGL8_SOLCO (O22328) Agamous-like MADS-box protein AGL8 homolog|
          Length = 250

 Score = 75.9 bits (185), Expect = 1e-13
 Identities = 47/120 (39%), Positives = 67/120 (55%), Gaps = 6/120 (5%)
 Frame = -2

Query: 673 QLXSSLKHIRARKNQLMHESISELQKKERSLQEENKVLQKELVEKQKXXXXXXXXXXXXX 494
           QL S+LKHIR+RKNQLMHESIS LQK++R+LQE+N  L K++ E++K             
Sbjct: 131 QLASALKHIRSRKNQLMHESISVLQKQDRALQEQNNQLSKKVKEREKEVEQQNQWDQQNH 190

Query: 493 XXXXXSFMM---RDAPPVADTSNHPAAA--GERAEDVAVQPQ-VPLRTALPLWMVSHING 332
                +F++    D+P + + S +      GE     + Q Q     T +P WMV H+NG
Sbjct: 191 EINSSTFVLPQQLDSPHLGEASQNTNVVDNGEVEGGNSSQXQGAANNTVMPQWMVRHLNG 250

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>AGL8_SOLTU (Q42429) Agamous-like MADS-box protein AGL8 homolog (POTM1-1)|
          Length = 250

 Score = 72.8 bits (177), Expect = 9e-13
 Identities = 44/120 (36%), Positives = 67/120 (55%), Gaps = 6/120 (5%)
 Frame = -2

Query: 673 QLXSSLKHIRARKNQLMHESISELQKKERSLQEENKVLQKELVEKQKXXXXXXXXXXXXX 494
           QL S+LKHIR+RKNQLMHESIS LQK++R+LQE+N  L K++ E++K             
Sbjct: 131 QLDSALKHIRSRKNQLMHESISVLQKQDRALQEQNNQLSKKVKEREKEVAQQNQWDQQNH 190

Query: 493 XXXXXSFMM---RDAPPVADT--SNHPAAAGE-RAEDVAVQPQVPLRTALPLWMVSHING 332
                +F++    D+P + +   + +    GE    + + Q      T +P WM+ H+NG
Sbjct: 191 EINSSTFVLPQQLDSPHLGEAYQNTNVVDNGEVEGGNSSQQQGAANNTVMPQWMLRHLNG 250

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>AP1_SINAL (Q41276) Floral homeotic protein APETALA1 (MADS C)|
          Length = 254

 Score = 68.6 bits (166), Expect = 2e-11
 Identities = 29/48 (60%), Positives = 44/48 (91%)
 Frame = -2

Query: 676 QQLXSSLKHIRARKNQLMHESISELQKKERSLQEENKVLQKELVEKQK 533
           QQL ++LKHIR+RKNQLMH+SI+ELQ+KE+++QE+N +L K++ E++K
Sbjct: 130 QQLDTALKHIRSRKNQLMHDSINELQRKEKAIQEQNSMLSKQIKEREK 177

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>AP1_ARATH (P35631) Floral homeotic protein APETALA1 (Agamous-like MADS-box|
           protein AGL7)
          Length = 256

 Score = 68.2 bits (165), Expect = 2e-11
 Identities = 30/48 (62%), Positives = 43/48 (89%)
 Frame = -2

Query: 676 QQLXSSLKHIRARKNQLMHESISELQKKERSLQEENKVLQKELVEKQK 533
           QQL ++LKHIR RKNQLM+ESI+ELQKKE+++QE+N +L K++ E++K
Sbjct: 130 QQLDTALKHIRTRKNQLMYESINELQKKEKAIQEQNSMLSKQIKEREK 177

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>AGL8_LYCES (Q40170) Agamous-like MADS-box protein AGL8 homolog (TM4)|
          Length = 227

 Score = 67.4 bits (163), Expect = 4e-11
 Identities = 32/47 (68%), Positives = 41/47 (87%)
 Frame = -2

Query: 673 QLXSSLKHIRARKNQLMHESISELQKKERSLQEENKVLQKELVEKQK 533
           QL S+LKHIR+RKNQLMHESIS LQKK+R+LQE+N  L K++ E++K
Sbjct: 131 QLDSALKHIRSRKNQLMHESISVLQKKDRALQEQNNQLSKKVKEREK 177

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>CAL_ARATH (Q39081) Transcription factor CAULIFLOWER (Agamous-like MADS-box|
           protein AGL10)
          Length = 253

 Score = 62.8 bits (151), Expect = 9e-10
 Identities = 27/47 (57%), Positives = 41/47 (87%)
 Frame = -2

Query: 676 QQLXSSLKHIRARKNQLMHESISELQKKERSLQEENKVLQKELVEKQ 536
           QQL ++LKHIR+RKNQLM+ES++ LQ+KE+ +QEEN +L K++ E++
Sbjct: 130 QQLETALKHIRSRKNQLMNESLNHLQRKEKEIQEENSMLTKQIKERE 176

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>MAD18_ORYSA (Q6Z4G0) MADS-box transcription factor 18 (OsMADS18) (MADS-box|
           protein 2) (OsMADS2) (MADS-box protein 28) (OsMADS28)
           (FDRMADS7)
          Length = 249

 Score = 62.4 bits (150), Expect = 1e-09
 Identities = 44/117 (37%), Positives = 58/117 (49%), Gaps = 8/117 (6%)
 Frame = -2

Query: 673 QLXSSLKHIRARKNQLMHESISELQKKERSLQEENKVLQKELVEKQKXXXXXXXXXXXXX 494
           QL  SLKHIR++KNQL+ ESISELQKKE+SL+ +N VLQK L+E +K             
Sbjct: 131 QLEYSLKHIRSKKNQLLFESISELQKKEKSLKNQNNVLQK-LMETEKEKNNAIINTNREE 189

Query: 493 XXXXXSFMMRDAP-----PVADTSN---HPAAAGERAEDVAVQPQVPLRTALPLWMV 347
                       P     P+  T+N    P  +GE   +    P     + LP WM+
Sbjct: 190 QNGATPSTSSPTPVTAPDPIPTTNNSQSQPRGSGE--SEAQPSPAQAGNSKLPPWML 244

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>AGL8_ARATH (Q38876) Agamous-like MADS-box protein AGL8 (Floral homeotic|
           protein AGL8) (Transcription factor FRUITFULL)
          Length = 242

 Score = 53.5 bits (127), Expect = 6e-07
 Identities = 25/47 (53%), Positives = 37/47 (78%)
 Frame = -2

Query: 673 QLXSSLKHIRARKNQLMHESISELQKKERSLQEENKVLQKELVEKQK 533
           QL +++K IR+RKNQ M ESIS LQKK+++LQ+ N  L K++ E++K
Sbjct: 131 QLDAAIKSIRSRKNQAMFESISALQKKDKALQDHNNSLLKKIKEREK 177

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>AGL8_SINAL (Q41274) Agamous-like MADS-box protein AGL8 homolog (MADS B)|
          Length = 241

 Score = 53.1 bits (126), Expect = 7e-07
 Identities = 25/47 (53%), Positives = 36/47 (76%)
 Frame = -2

Query: 673 QLXSSLKHIRARKNQLMHESISELQKKERSLQEENKVLQKELVEKQK 533
           QL +++K IR+RKNQ M ESIS LQKK++ LQ+ N  L K++ E++K
Sbjct: 131 QLHAAIKSIRSRKNQAMFESISALQKKDKVLQDHNNALLKKIKEREK 177

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>GGM13_GNEGN (Q9XGJ4) MADS-box protein GGM13|
          Length = 237

 Score = 44.7 bits (104), Expect = 3e-04
 Identities = 21/47 (44%), Positives = 33/47 (70%)
 Frame = -2

Query: 676 QQLXSSLKHIRARKNQLMHESISELQKKERSLQEENKVLQKELVEKQ 536
           QQL S+   +R+RKNQLM + +  L++KER L+++N  L + L E+Q
Sbjct: 126 QQLESASSRVRSRKNQLMLQQLENLRRKERILEDQNSHLCRLLAEQQ 172

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>AGL9_SINAL (O04067) Agamous-like MADS-box protein AGL9 homolog (MADS D)|
          Length = 254

 Score = 44.7 bits (104), Expect = 3e-04
 Identities = 22/45 (48%), Positives = 30/45 (66%)
 Frame = -2

Query: 676 QQLXSSLKHIRARKNQLMHESISELQKKERSLQEENKVLQKELVE 542
           +QL SSLK IRA + Q M + +++LQ KER L E NK L+  L +
Sbjct: 133 RQLDSSLKQIRALRTQFMLDQLNDLQSKERMLNETNKTLRLRLAD 177

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>AGL9_PETHY (Q03489) Agamous-like MADS-box protein AGL9 homolog (Floral|
           homeotic protein FBP2) (Floral-binding protein 2)
          Length = 241

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 20/45 (44%), Positives = 32/45 (71%)
 Frame = -2

Query: 676 QQLXSSLKHIRARKNQLMHESISELQKKERSLQEENKVLQKELVE 542
           +QL  SLK IR+ + QLM + + +LQ+KE +L E N+ L++ L+E
Sbjct: 131 RQLDMSLKQIRSTRTQLMLDQLQDLQRKEHALNEANRTLKQRLME 175

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>SEP3_ARATH (O22456) Developmental protein SEPALLATA3 (Agamous-like MADS-box|
           protein AGL9)
          Length = 251

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 22/45 (48%), Positives = 30/45 (66%)
 Frame = -2

Query: 676 QQLXSSLKHIRARKNQLMHESISELQKKERSLQEENKVLQKELVE 542
           +QL SSLK IRA + Q M + +++LQ KER L E NK L+  L +
Sbjct: 133 RQLDSSLKQIRALRTQFMLDQLNDLQSKERMLTETNKTLRLRLAD 177

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>MADS8_ORYSA (Q9SAR1) MADS-box transcription factor 8 (OsMADS8) (MADS-box|
           protein 24) (OsMADS24)
          Length = 248

 Score = 43.9 bits (102), Expect = 5e-04
 Identities = 20/48 (41%), Positives = 35/48 (72%)
 Frame = -2

Query: 676 QQLXSSLKHIRARKNQLMHESISELQKKERSLQEENKVLQKELVEKQK 533
           +QL SSL+HIR+ + Q M + +++LQ++E+ L E NK L+++L E  +
Sbjct: 132 KQLDSSLRHIRSTRTQHMLDQLTDLQRREQMLCEANKCLRRKLEESNQ 179

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>MAD29_ORYSA (Q6H711) MADS-box transcription factor 29 (OsMADS29)|
          Length = 260

 Score = 43.1 bits (100), Expect = 8e-04
 Identities = 28/101 (27%), Positives = 48/101 (47%)
 Frame = -2

Query: 676 QQLXSSLKHIRARKNQLMHESISELQKKERSLQEENKVLQKELVEKQKXXXXXXXXXXXX 497
           QQL  S+  +RARK+QL+++ +  L++KE  L+++N  L + + E               
Sbjct: 127 QQLEFSVTKVRARKHQLLNQQLDNLRRKEHILEDQNSFLCRMINENHHQAAVGGGDVKA- 185

Query: 496 XXXXXXSFMMRDAPPVADTSNHPAAAGERAEDVAVQPQVPL 374
                   M+  AP ++  +  PA  GE +   A+Q   PL
Sbjct: 186 --------MVEMAPVLSMLTAAPAYYGEESSSTALQLTPPL 218

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>MADS1_ORYSA (Q40700) MADS-box transcription factor 1 (OsMADS1) (Protein LEAFY|
           HULL STERILE1) (Protein SEPALLATA-like)
          Length = 257

 Score = 43.1 bits (100), Expect = 8e-04
 Identities = 21/44 (47%), Positives = 32/44 (72%)
 Frame = -2

Query: 673 QLXSSLKHIRARKNQLMHESISELQKKERSLQEENKVLQKELVE 542
           Q+  SLK IR+RKNQ + + + +L+ KE+ LQ+ NK L+K+L E
Sbjct: 128 QIEVSLKQIRSRKNQALLDQLFDLKSKEQQLQDLNKDLRKKLQE 171

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>AGL9_LYCES (Q42464) Agamous-like MADS-box protein AGL9 homolog (TM5)|
          Length = 224

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 19/45 (42%), Positives = 32/45 (71%)
 Frame = -2

Query: 676 QQLXSSLKHIRARKNQLMHESISELQKKERSLQEENKVLQKELVE 542
           +QL  SLK IR+ + QLM + +++ Q+KE +L E N+ L++ L+E
Sbjct: 131 RQLDMSLKQIRSTRTQLMLDQLTDYQRKEHALNEANRTLKQRLME 175

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>MADS7_ORYSA (Q6Q9I1) MADS-box transcription factor 7 (OsMADS7) (Protein|
           AGAMOUS-like 6) (MADS-box protein 45) (OsMADS45)
           (FDRMADS1) (RMADS216)
          Length = 249

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 18/45 (40%), Positives = 33/45 (73%)
 Frame = -2

Query: 676 QQLXSSLKHIRARKNQLMHESISELQKKERSLQEENKVLQKELVE 542
           +QL SSLKH+R  + + + + ++ELQ+KE+ + E N+ L+++L E
Sbjct: 132 KQLDSSLKHVRTTRTKHLVDQLTELQRKEQMVSEANRCLRRKLEE 176

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>M17_MAIZE (Q8VWM8) MADS-box protein ZMM17|
          Length = 259

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 18/48 (37%), Positives = 34/48 (70%)
 Frame = -2

Query: 676 QQLXSSLKHIRARKNQLMHESISELQKKERSLQEENKVLQKELVEKQK 533
           QQL  S+  +RARK+QL+++ +  L++KE+ L+++N  L + + E Q+
Sbjct: 127 QQLEYSVSKVRARKHQLLNQQLDNLRRKEQILEDQNTFLYRMINENQQ 174

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>MAD34_ORYSA (Q6Q9H6) MADS-box transcription factor 34 (OsMADS34)|
           (RMADS212/RMADS217/RMADS221)
          Length = 239

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 18/44 (40%), Positives = 34/44 (77%)
 Frame = -2

Query: 673 QLXSSLKHIRARKNQLMHESISELQKKERSLQEENKVLQKELVE 542
           Q+  +LK IR+RK Q++ + + +L++KE+ LQ+ N+VL+++L E
Sbjct: 131 QVVRTLKQIRSRKTQVLLDELCDLKRKEQMLQDANRVLKRKLDE 174

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>SOC1_ARATH (O64645) SUPPRESSOR OF CONSTANS OVEREXPRESSION 1 protein|
           (Agamous-like MADS-box protein AGL20)
          Length = 214

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 20/42 (47%), Positives = 30/42 (71%)
 Frame = -2

Query: 676 QQLXSSLKHIRARKNQLMHESISELQKKERSLQEENKVLQKE 551
           QQL  S+K IRARK Q+  E I +L++KE++L  EN+ L ++
Sbjct: 129 QQLEKSVKCIRARKTQVFKEQIEQLKQKEKALAAENEKLSEK 170

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>MADS3_ORYSA (Q40704) MADS-box transcription factor 3 (OsMADS3) (Protein|
           AGAMOUS-like) (RMADS222)
          Length = 236

 Score = 40.8 bits (94), Expect = 0.004
 Identities = 17/47 (36%), Positives = 31/47 (65%)
 Frame = -2

Query: 673 QLXSSLKHIRARKNQLMHESISELQKKERSLQEENKVLQKELVEKQK 533
           +L   +  IRARKN+L++  +  +QK+E  LQ +N  L+ ++VE ++
Sbjct: 131 RLEKGIAKIRARKNELLYAEVEYMQKREVELQNDNMYLRSKVVENER 177

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>MAD17_ORYSA (Q7XUN2) MADS-box transcription factor 17 (OsMADS17) (NMADS3)|
           (RMADS213)
          Length = 249

 Score = 40.4 bits (93), Expect = 0.005
 Identities = 20/43 (46%), Positives = 28/43 (65%)
 Frame = -2

Query: 676 QQLXSSLKHIRARKNQLMHESISELQKKERSLQEENKVLQKEL 548
           +QL  SL   R RK Q+M E + +L++KER L E NK L+ +L
Sbjct: 130 KQLEYSLSQARQRKTQIMMEQVDDLRRKERQLGELNKQLKNKL 172

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>AGL19_ARATH (O82743) Agamous-like MADS-box protein AGL19|
          Length = 219

 Score = 40.4 bits (93), Expect = 0.005
 Identities = 20/41 (48%), Positives = 30/41 (73%)
 Frame = -2

Query: 673 QLXSSLKHIRARKNQLMHESISELQKKERSLQEENKVLQKE 551
           QL  SL  IRA+K QL+ E I +L+ +ER+L +ENK L+++
Sbjct: 129 QLDRSLSRIRAKKYQLLREEIEKLKAEERNLVKENKDLKEK 169

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>MADS6_ORYSA (Q6EU39) MADS-box transcription factor 6 (OsMADS6)|
          Length = 250

 Score = 40.0 bits (92), Expect = 0.007
 Identities = 20/43 (46%), Positives = 28/43 (65%)
 Frame = -2

Query: 676 QQLXSSLKHIRARKNQLMHESISELQKKERSLQEENKVLQKEL 548
           +QL  +L   R RK QLM E + EL++KER L E N+ L+ +L
Sbjct: 128 KQLECALSQARQRKTQLMMEQVEELRRKERQLGEINRQLKHKL 170

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>AGL14_ARATH (Q38838) Agamous-like MADS-box protein AGL14|
          Length = 221

 Score = 40.0 bits (92), Expect = 0.007
 Identities = 20/41 (48%), Positives = 29/41 (70%)
 Frame = -2

Query: 673 QLXSSLKHIRARKNQLMHESISELQKKERSLQEENKVLQKE 551
           QL  SL  IRA+K QL+ E   +L++KER+L  ENK+L ++
Sbjct: 130 QLDRSLMKIRAKKYQLLREETEKLKEKERNLIAENKMLMEK 170

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>MADS5_ORYSA (Q7GCP2) MADS-box transcription factor 5 (OsMADS5) (FDRMADS2)|
          Length = 225

 Score = 39.7 bits (91), Expect = 0.009
 Identities = 18/44 (40%), Positives = 32/44 (72%)
 Frame = -2

Query: 673 QLXSSLKHIRARKNQLMHESISELQKKERSLQEENKVLQKELVE 542
           Q+  SL +IR+ KNQ + + + EL++KE+ LQ+ NK L++++ E
Sbjct: 132 QIEISLMNIRSSKNQQLLDQVFELKRKEQQLQDANKDLKRKIQE 175

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>AP32_ASAEU (Q9LLA7) MADS-box protein AeAP3-2 (APETALA3-2) (Fragment)|
          Length = 210

 Score = 38.9 bits (89), Expect = 0.015
 Identities = 16/41 (39%), Positives = 28/41 (68%)
 Frame = -2

Query: 676 QQLXSSLKHIRARKNQLMHESISELQKKERSLQEENKVLQK 554
           QQL  S+  +R+RK QL+ + +  L++KE  L+E+N+ L +
Sbjct: 101 QQLEISVNKVRSRKEQLLQQQLDNLRRKENMLEEQNRELYR 141

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>AGL31_ARATH (Q9FPN7) Agamous-like MADS-box protein AGL31 (Protein MADS|
           AFFECTING FLOWERING 2)
          Length = 196

 Score = 38.5 bits (88), Expect = 0.019
 Identities = 19/46 (41%), Positives = 29/46 (63%)
 Frame = -2

Query: 676 QQLXSSLKHIRARKNQLMHESISELQKKERSLQEENKVLQKELVEK 539
           +QL ++L   RARK +LM   +  LQK E  L+EEN+ L  ++ +K
Sbjct: 122 EQLETALSVTRARKTELMMGEVKSLQKTENLLREENQTLASQVGKK 167

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>AG_ARATH (P17839) Floral homeotic protein AGAMOUS|
          Length = 252

 Score = 38.5 bits (88), Expect = 0.019
 Identities = 15/47 (31%), Positives = 31/47 (65%)
 Frame = -2

Query: 673 QLXSSLKHIRARKNQLMHESISELQKKERSLQEENKVLQKELVEKQK 533
           +L  S+  IR++KN+L+   I  +QK+E  L  +N++L+ ++ E ++
Sbjct: 146 RLERSITRIRSKKNELLFSEIDYMQKREVDLHNDNQILRAKIAENER 192

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>MAD58_ORYSA (Q2V0P1) MADS-box transcription factor 58 (OsMADS58)|
          Length = 272

 Score = 37.7 bits (86), Expect = 0.032
 Identities = 17/47 (36%), Positives = 29/47 (61%)
 Frame = -2

Query: 673 QLXSSLKHIRARKNQLMHESISELQKKERSLQEENKVLQKELVEKQK 533
           +L   L  IRARKN+L+   I  +Q++E  LQ +N  L+ ++ E ++
Sbjct: 172 RLDKGLGKIRARKNELLCAEIEYMQRRETELQNDNMYLKSKVAESER 218

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>TT16_ARATH (Q8RYD9) TRANSPARENT TESTA 16 protein (Arabidopsis BSISTER MADS-box|
           protein)
          Length = 252

 Score = 37.4 bits (85), Expect = 0.042
 Identities = 17/45 (37%), Positives = 28/45 (62%)
 Frame = -2

Query: 676 QQLXSSLKHIRARKNQLMHESISELQKKERSLQEENKVLQKELVE 542
           +QL  S+  +R RKN+LM + +  L +K R L+E+N  + + L E
Sbjct: 128 RQLEHSVLKVRERKNELMQQQLENLSRKRRMLEEDNNNMYRWLHE 172

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>AG_BRANA (Q01540) Floral homeotic protein AGAMOUS|
          Length = 252

 Score = 37.4 bits (85), Expect = 0.042
 Identities = 15/47 (31%), Positives = 31/47 (65%)
 Frame = -2

Query: 673 QLXSSLKHIRARKNQLMHESISELQKKERSLQEENKVLQKELVEKQK 533
           +L  S+  IR++KN+L+   I  +QK+E  L  +N++L+ ++ E ++
Sbjct: 146 RLDRSVNRIRSKKNELLFAEIDYMQKREVDLHNDNQLLRAKIAENER 192

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>FBP24_PETHY (Q9ATE5) MADS-box protein FBP24 (Floral binding protein 24)|
          Length = 268

 Score = 37.0 bits (84), Expect = 0.055
 Identities = 18/47 (38%), Positives = 30/47 (63%)
 Frame = -2

Query: 676 QQLXSSLKHIRARKNQLMHESISELQKKERSLQEENKVLQKELVEKQ 536
           +QL  +L  IRARK +LM + +  L+K E+ L++EN  + + L+  Q
Sbjct: 130 KQLEHALNKIRARKLELMQQQMENLKKTEKMLEKENHDMYQWLMNNQ 176

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>FLC_ARATH (Q9S7Q7) FLOWERING LOCUS C protein (MADS-box protein FLOWERING|
           LOCUS F)
          Length = 196

 Score = 36.6 bits (83), Expect = 0.072
 Identities = 16/43 (37%), Positives = 30/43 (69%)
 Frame = -2

Query: 676 QQLXSSLKHIRARKNQLMHESISELQKKERSLQEENKVLQKEL 548
           + L ++L   RA+K +LM + +  L++KE+ L+EEN+VL  ++
Sbjct: 122 EHLETALSVTRAKKTELMLKLVENLKEKEKMLKEENQVLASQM 164

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>AG_PETHY (Q40885) Floral homeotic protein AGAMOUS (pMADS3)|
          Length = 242

 Score = 36.6 bits (83), Expect = 0.072
 Identities = 15/48 (31%), Positives = 29/48 (60%)
 Frame = -2

Query: 676 QQLXSSLKHIRARKNQLMHESISELQKKERSLQEENKVLQKELVEKQK 533
           Q++   +  IRA+KN+L+   I  +QK+E  L   N+ L+ ++ E ++
Sbjct: 145 QKIEKGISKIRAKKNELLFAEIEYMQKREIDLHNNNQYLRAKIAETER 192

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>MAD13_ORYSA (Q2QW53) MADS-box transcription factor 13 (OsMADS13) (RMADS206)|
          Length = 270

 Score = 36.2 bits (82), Expect = 0.094
 Identities = 16/47 (34%), Positives = 30/47 (63%)
 Frame = -2

Query: 673 QLXSSLKHIRARKNQLMHESISELQKKERSLQEENKVLQKELVEKQK 533
           +L   +  IRARKN+L+   I+ + K+E  LQ +N  L+ ++ E+++
Sbjct: 133 RLEKGISKIRARKNELLASEINYMAKREIELQNDNMDLRTKIAEEEQ 179

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>DEF21_ANTMA (Q8RVL4) MADS-box protein defh21 (DEFICIENS homolog 21)|
          Length = 247

 Score = 36.2 bits (82), Expect = 0.094
 Identities = 17/45 (37%), Positives = 28/45 (62%)
 Frame = -2

Query: 670 LXSSLKHIRARKNQLMHESISELQKKERSLQEENKVLQKELVEKQ 536
           L  SL  +RARK +L+HE +  L++ E  L++EN+ +   L+  Q
Sbjct: 135 LDQSLNKVRARKLELLHEQMENLKRTEFMLEKENQEMYHWLMSNQ 179

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>AG_PANGI (Q40872) Floral homeotic protein AGAMOUS (GAG2)|
          Length = 242

 Score = 36.2 bits (82), Expect = 0.094
 Identities = 15/47 (31%), Positives = 28/47 (59%)
 Frame = -2

Query: 673 QLXSSLKHIRARKNQLMHESISELQKKERSLQEENKVLQKELVEKQK 533
           +L   +  IR++KN+L+   I  +QKKE  L   N+ L+ ++ E ++
Sbjct: 146 KLEKGISRIRSKKNELLFAEIEYMQKKEIDLHNNNQYLRAKIAENER 192

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>AG_TOBAC (Q43585) Floral homeotic protein AGAMOUS (NAG1)|
          Length = 248

 Score = 35.4 bits (80), Expect = 0.16
 Identities = 14/48 (29%), Positives = 29/48 (60%)
 Frame = -2

Query: 676 QQLXSSLKHIRARKNQLMHESISELQKKERSLQEENKVLQKELVEKQK 533
           Q++   +  IR++KN+L+   I  +QK+E  L   N+ L+ ++ E ++
Sbjct: 145 QKIEKGISKIRSKKNELLFAEIEYMQKREIDLHNNNQYLRAKIAETER 192

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>AG_LYCES (Q40168) Floral homeotic protein AGAMOUS (TAG1)|
          Length = 248

 Score = 35.4 bits (80), Expect = 0.16
 Identities = 14/48 (29%), Positives = 29/48 (60%)
 Frame = -2

Query: 676 QQLXSSLKHIRARKNQLMHESISELQKKERSLQEENKVLQKELVEKQK 533
           Q++   +  IR++KN+L+   I  +QK+E  L   N+ L+ ++ E ++
Sbjct: 145 QRIEKGISKIRSKKNELLFAEIEYMQKREVDLHNNNQYLRAKIAETER 192

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>AGL1_ARATH (P29381) Agamous-like MADS-box protein AGL1 (Protein Shatterproof|
           1)
          Length = 248

 Score = 34.3 bits (77), Expect = 0.36
 Identities = 14/44 (31%), Positives = 26/44 (59%)
 Frame = -2

Query: 673 QLXSSLKHIRARKNQLMHESISELQKKERSLQEENKVLQKELVE 542
           +L   +  +R++KN+L+   I  +QK+E  LQ  N  L+ ++ E
Sbjct: 145 RLEKGISRVRSKKNELLVAEIEYMQKREMELQHNNMYLRAKIAE 188

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>MAD30_ORYSA (Q655V4) MADS-box transcription factor 30 (OsMADS30)|
          Length = 221

 Score = 33.9 bits (76), Expect = 0.47
 Identities = 13/38 (34%), Positives = 26/38 (68%)
 Frame = -2

Query: 673 QLXSSLKHIRARKNQLMHESISELQKKERSLQEENKVL 560
           QL SSL  + ARK++LM + + ++++  +++ E+N  L
Sbjct: 131 QLESSLSKVHARKDELMSQQLEDMRRMHQTVHEQNNFL 168

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>MAD26_ORYSA (Q8L887) MADS-box transcription factor 26 (OsMADS26) (FDRMADS3)|
           (RMADS220)
          Length = 222

 Score = 33.5 bits (75), Expect = 0.61
 Identities = 15/38 (39%), Positives = 27/38 (71%)
 Frame = -2

Query: 652 HIRARKNQLMHESISELQKKERSLQEENKVLQKELVEK 539
           +IR+ K Q+M + I  L+ KE  L+  N++LQ+++VE+
Sbjct: 136 NIRSAKMQIMIQEIQALKSKEGMLKAANEILQEKIVEQ 173

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>ZIC2_XENLA (Q91689) Zinc finger protein ZIC 2 (Zinc finger protein of the|
           cerebellum 2) (Zinc finger DNA-binding protein fZic)
          Length = 501

 Score = 33.1 bits (74), Expect = 0.80
 Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = +1

Query: 460 HPSS*RKKKKSWFEAEFDLAAPPGPSASPQVPSG-ELYSPPAVTSPSSEAQ 609
           HPSS RK  K         ++P G  +SP   SG E  +PP + SP+SE Q
Sbjct: 423 HPSSLRKHMK------VHESSPQGSESSPAASSGYESSTPPGLVSPNSETQ 467

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>ZIC2_MOUSE (Q62520) Zinc finger protein ZIC 2 (Zinc finger protein of the|
           cerebellum 2)
          Length = 530

 Score = 32.7 bits (73), Expect = 1.0
 Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = +1

Query: 460 HPSS*RKKKKSWFEAEFDLAAPPGPSASPQVPSG-ELYSPPAVTSPSSEAQ 609
           HPSS RK  K         ++P G  +SP   SG E  +PP + SPS+E Q
Sbjct: 404 HPSSLRKHMK------VHESSPQGSESSPAASSGYESSTPPGLVSPSAEPQ 448

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>ZIC2_HUMAN (O95409) Zinc finger protein ZIC 2 (Zinc finger protein of the|
           cerebellum 2)
          Length = 532

 Score = 32.7 bits (73), Expect = 1.0
 Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = +1

Query: 460 HPSS*RKKKKSWFEAEFDLAAPPGPSASPQVPSG-ELYSPPAVTSPSSEAQ 609
           HPSS RK  K         ++P G  +SP   SG E  +PP + SPS+E Q
Sbjct: 404 HPSSLRKHMK------VHESSPQGSESSPAASSGYESSTPPGLVSPSAEPQ 448

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>MAD22_ORYSA (Q9XJ66) MADS-box transcription factor 22 (OsMADS22)|
          Length = 228

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 16/43 (37%), Positives = 24/43 (55%)
 Frame = -2

Query: 676 QQLXSSLKHIRARKNQLMHESISELQKKERSLQEENKVLQKEL 548
           + L + L  +   K+Q   E ISELQ+K   L EEN  L+ ++
Sbjct: 128 KNLEAGLHRVMLTKDQQFMEQISELQRKSSQLAEENMQLRNQV 170

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>CK5P2_MOUSE (Q8K389) CDK5 regulatory subunit-associated protein 2 (CDK5|
            activator-binding protein C48)
          Length = 1822

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 17/48 (35%), Positives = 31/48 (64%)
 Frame = -2

Query: 676  QQLXSSLKHIRARKNQLMHESISELQKKERSLQEENKVLQKELVEKQK 533
            Q+    L+   ARK     ES+ +LQ +  S++EEN+ LQ++++EK++
Sbjct: 1481 QKESEKLRESLARKA----ESLEQLQLEYTSVREENERLQRDIIEKER 1524

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>AGL15_ARATH (Q38847) Agamous-like MADS-box protein AGL15|
          Length = 268

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 15/45 (33%), Positives = 28/45 (62%)
 Frame = -2

Query: 676 QQLXSSLKHIRARKNQLMHESISELQKKERSLQEENKVLQKELVE 542
           QQL  +L  +R RK +L+   + E + KE+  + EN+ L++++ E
Sbjct: 122 QQLYHALITVRERKERLLTNQLEESRLKEQRAELENETLRRQVQE 166

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>PRGR_RABIT (P06186) Progesterone receptor (PR)|
          Length = 930

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 15/32 (46%), Positives = 17/32 (53%)
 Frame = +1

Query: 505 EFDLAAPPGPSASPQVPSGELYSPPAVTSPSS 600
           +F LAAPP PS  P+VPS          SP S
Sbjct: 415 DFQLAAPPPPSLPPRVPSSRPGEAAVAASPGS 446

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>TRIPB_HUMAN (Q15643) Thyroid receptor-interacting protein 11 (TRIP-11)|
           (Golgi-associated microtubule-binding protein 210)
           (GMAP-210) (Trip230) (Clonal evolution related gene on
           chromosome 14)
          Length = 1979

 Score = 30.8 bits (68), Expect = 4.0
 Identities = 13/31 (41%), Positives = 22/31 (70%)
 Frame = -2

Query: 640 RKNQLMHESISELQKKERSLQEENKVLQKEL 548
           RKN+++ ++I E  +   S++EEN  LQ+EL
Sbjct: 839 RKNEILRQTIEEKDRSLGSMKEENNHLQEEL 869

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>MYC_DROME (Q9W4S7) Myc protein (dMyc1) (dMyc) (Diminutive protein)|
          Length = 717

 Score = 30.8 bits (68), Expect = 4.0
 Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 12/62 (19%)
 Frame = +3

Query: 33  IHRNNTQEQRVSSKVENSSL-MLHINYMVDYSYSHL-----------SPGGKETEVDEVK 176
           I  NN      ++K++N+S  MLH+ ++ D+SY+             +P   + E+D V 
Sbjct: 358 ITTNNNNSNNKNNKLKNNSNGMLHMMHITDHSYTRCNDMVDDGPNLETPSDSDEEIDVVS 417

Query: 177 YT 182
           YT
Sbjct: 418 YT 419

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>CCD11_HUMAN (Q96M91) Coiled-coil domain-containing protein 11|
          Length = 399

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 12/37 (32%), Positives = 23/37 (62%)
 Frame = -2

Query: 649 IRARKNQLMHESISELQKKERSLQEENKVLQKELVEK 539
           + +   Q+ HE+  ++ KK+++ QE   +LQK L E+
Sbjct: 144 VESNNAQIKHENEQDMLKKQKAKQETRTILQKALQER 180

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>ZIC1_XENLA (O73689) Zinc finger protein ZIC 1 (Zinc finger protein of the|
           cerebellum 1) (ZIC-related-1 protein) (ZIC-R1)
           (ODD-paired-like)
          Length = 443

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 21/51 (41%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = +1

Query: 460 HPSS*RKKKKSWFEAEFDLAAPPGPSASPQVPSG-ELYSPPAVTSPSSEAQ 609
           HPSS RK  K         A+  G   SP   SG E  +PP + SPS+E Q
Sbjct: 369 HPSSLRKHMK------VHEASSQGSQPSPAASSGYESSTPPTIVSPSAENQ 413

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>PHLB1_HUMAN (Q86UU1) Pleckstrin homology-like domain family B member 1 (Protein|
            LL5-alpha)
          Length = 1377

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 14/47 (29%), Positives = 29/47 (61%)
 Frame = -2

Query: 676  QQLXSSLKHIRARKNQLMHESISELQKKERSLQEENKVLQKELVEKQ 536
            +++   LK   A KN+LM     E++ + ++L+EE +  ++E VE++
Sbjct: 1149 EEMEKMLKEAHAEKNRLMESREREMELRRQALEEERR--RREQVERR 1193

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>ROCK1_PANTR (P61584) Rho-associated protein kinase 1 (EC 2.7.11.1)|
           (Rho-associated, coiled-coil-containing protein kinase
           1) (p160 ROCK-1) (p160ROCK) (Fragment)
          Length = 1003

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
 Frame = -2

Query: 649 IRARKNQL-MHESISELQKKERSLQEENKVLQKELVEKQK 533
           +R RK+   M +SIS+L+   R LQE N++L+    +  K
Sbjct: 211 VRLRKSHTEMSKSISQLESLNRELQERNRILENSKSQTDK 250

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>PALA_DEBHA (Q6BLT2) pH-response regulator protein palA/RIM20|
          Length = 766

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = -2

Query: 649 IRARKNQLMHESISELQKKERSLQEENKVLQKELVE 542
           I+AR N ++   I   +KK+R L EEN  + +   E
Sbjct: 581 IKARNNNILPSIIDSFKKKQRKLYEENAAIDERSFE 616

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>MAD55_ORYSA (Q69TG5) MADS-box transcription factor 55 (OsMADS55)|
          Length = 245

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 15/43 (34%), Positives = 25/43 (58%)
 Frame = -2

Query: 676 QQLXSSLKHIRARKNQLMHESISELQKKERSLQEENKVLQKEL 548
           + L + L+ +   K+Q   + ISELQ+K   L EEN  L+ ++
Sbjct: 151 KNLEAGLQRVLCTKDQQFMQEISELQRKGIQLAEENMRLRDQM 193

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>NPHP3_XENLA (Q6AZT7) Nephrocystin-3|
          Length = 1300

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 18/48 (37%), Positives = 25/48 (52%)
 Frame = -2

Query: 676 QQLXSSLKHIRARKNQLMHESISELQKKERSLQEENKVLQKELVEKQK 533
           ++L    +  R  KN      ++ +QKKE  L EENK L+ EL   QK
Sbjct: 69  ERLKKEYEIFRVSKNN----EVASMQKKEIKLDEENKRLRAELQALQK 112

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>KIFC1_HUMAN (Q9BW19) Kinesin-like protein KIFC1 (Kinesin-like protein 2)|
           (Kinesin-related protein HSET)
          Length = 673

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = -2

Query: 613 ISELQKKERSLQEENKVLQKELVEKQK 533
           + ELQKK+  LQEE + L  +L EK++
Sbjct: 227 VQELQKKQVELQEERRGLMSQLEEKER 253

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>VGP3_EBV (P03200) Envelope glycoprotein GP340/GP220 (Membrane antigen) (MA)|
          Length = 907

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +1

Query: 499 EAEFDLAAPPGPSASPQVPSGELYSPPAVTSPSSEA 606
           E       PP  + SPQ PSG+  + P VTS   +A
Sbjct: 744 EVNVTKGTPPQNATSPQAPSGQKTAVPTVTSTGGKA 779

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>ROCK1_RABIT (O77819) Rho-associated protein kinase 1 (EC 2.7.11.1)|
           (Rho-associated, coiled-coil-containing protein kinase
           1) (p160 ROCK-1) (p160ROCK) (cAMP-dependent protein
           kinase ROCK-I) (CePKA) (Corneal epithelial
           Rho-associated-Ser/Thr kinase 1) (HEB
          Length = 1354

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
 Frame = -2

Query: 649 IRARKNQL-MHESISELQKKERSLQEENKVLQKELVEKQK 533
           +R RK+   M +SIS+L+   R LQE N++L+    +  K
Sbjct: 562 VRLRKSHTEMSKSISQLESLNRELQERNRILENSKSQTDK 601

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>ROCK1_MOUSE (P70335) Rho-associated protein kinase 1 (EC 2.7.11.1)|
           (Rho-associated, coiled-coil-containing protein kinase
           1) (p160 ROCK-1) (p160ROCK)
          Length = 1354

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
 Frame = -2

Query: 649 IRARKNQL-MHESISELQKKERSLQEENKVLQKELVEKQK 533
           +R RK+   M +SIS+L+   R LQE N++L+    +  K
Sbjct: 562 VRLRKSHTEMSKSISQLESLNRELQERNRILENSKSQADK 601

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>ROCK1_HUMAN (Q13464) Rho-associated protein kinase 1 (EC 2.7.11.1)|
           (Rho-associated, coiled-coil-containing protein kinase
           1) (p160 ROCK-1) (p160ROCK) (NY-REN-35 antigen)
          Length = 1354

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
 Frame = -2

Query: 649 IRARKNQL-MHESISELQKKERSLQEENKVLQKELVEKQK 533
           +R RK+   M +SIS+L+   R LQE N++L+    +  K
Sbjct: 562 VRLRKSHTEMSKSISQLESLNRELQERNRILENSKSQTDK 601

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>INCE_HUMAN (Q9NQS7) Inner centromere protein|
          Length = 923

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 14/36 (38%), Positives = 26/36 (72%)
 Frame = -2

Query: 640 RKNQLMHESISELQKKERSLQEENKVLQKELVEKQK 533
           R+ Q   ++  ELQ++E++L+ + + LQ+EL EK+K
Sbjct: 730 RREQERLQAERELQEREKALRLQKEQLQRELEEKKK 765

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>TPR_HUMAN (P12270) Nucleoprotein TPR|
          Length = 2349

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 12/40 (30%), Positives = 27/40 (67%)
 Frame = -2

Query: 655  KHIRARKNQLMHESISELQKKERSLQEENKVLQKELVEKQ 536
            +H+  ++ Q + E++++ + K +SL+ + + LQK L EK+
Sbjct: 1469 QHVSVQEMQELKETLNQAETKSKSLESQVENLQKTLSEKE 1508

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>VGP3_EBVP3 (P68344) Envelope glycoprotein GP340 (Membrane antigen) (MA)|
          Length = 886

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +1

Query: 499 EAEFDLAAPPGPSASPQVPSGELYSPPAVTSPSSEA 606
           E       PP  + SPQ PSG+  + P VTS   +A
Sbjct: 723 EVNVTKGTPPKNATSPQAPSGQKTAVPTVTSTGGKA 758

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>VGP3_EBVA8 (P68343) Envelope glycoprotein GP340 (Membrane antigen) (MA)|
          Length = 886

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +1

Query: 499 EAEFDLAAPPGPSASPQVPSGELYSPPAVTSPSSEA 606
           E       PP  + SPQ PSG+  + P VTS   +A
Sbjct: 723 EVNVTKGTPPKNATSPQAPSGQKTAVPTVTSTGGKA 758

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>FOSL2_CHICK (P18625) Fos-related antigen 2|
          Length = 323

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 8/49 (16%)
 Frame = -2

Query: 655 KHIRARKNQLM--------HESISELQKKERSLQEENKVLQKELVEKQK 533
           + IR  +N+L          E   +LQ +   L+EE  VLQKE+ E QK
Sbjct: 127 RRIRRERNKLAAAKCRNRRRELTEKLQAETEVLEEEKSVLQKEIAELQK 175

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>SYF2_MAGGR (Q521C0) Pre-mRNA-splicing factor SYF2|
          Length = 340

 Score = 29.6 bits (65), Expect = 8.8
 Identities = 18/64 (28%), Positives = 27/64 (42%)
 Frame = -1

Query: 674 AAXKLTETYQSQEEPTYARIHF*ASEEGEVTAGGE*SSPEGTCGEAEGPGGAARSNSASN 495
           A+  L +T  S   PT A +    +   E T   + +SPE T      PG  A++ +A  
Sbjct: 41  ASVNLRDTKMSDSTPTEAAVAESNTAGNEATTNSDKASPETTTTSTTEPGNTAKTAAAER 100

Query: 494 QLFF 483
              F
Sbjct: 101 MARF 104

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>AP3D1_MOUSE (O54774) AP-3 complex subunit delta-1 (Adapter-related protein|
           complex 3 delta-1 subunit) (Delta-adaptin 3) (AP-3
           complex delta subunit) (Delta-adaptin) (mBLVR1)
          Length = 1199

 Score = 29.6 bits (65), Expect = 8.8
 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = +1

Query: 478 KKKKSWFEAEFDLAAPPGPSASP-QVPSGELYSPPAVTSPSSEAQ 609
           KK K   + +F L+  P P+A+P   PS E  +   +TSP  E +
Sbjct: 855 KKDKKGEDLDFWLSTTPPPAAAPIPAPSTEELAASTITSPKDECE 899

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>TPR1_SCHPO (O42668) Tetratricopeptide repeat protein 1|
          Length = 1039

 Score = 29.6 bits (65), Expect = 8.8
 Identities = 14/38 (36%), Positives = 25/38 (65%)
 Frame = -2

Query: 646 RARKNQLMHESISELQKKERSLQEENKVLQKELVEKQK 533
           +AR+       + E Q++ER LQEE + +Q+E++E +K
Sbjct: 882 KARRLAEEEALLKEKQERERQLQEERQKMQEEVLEWRK 919


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,318,797
Number of Sequences: 219361
Number of extensions: 1974013
Number of successful extensions: 7035
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 6332
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7010
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6655306086
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result