ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal4g12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC004629.1| Homo sapiens chromosome 5, BAC clone 87L18 (LBNL ... 46 0.15
2emb|AL691512.11| Mouse DNA sequence from clone RP23-440L5 on chr... 46 0.15
3gb|AC106781.2| Homo sapiens chromosome 5 clone RP11-346A9, compl... 46 0.15
4gb|AC145927.3| Gallus gallus BAC clone CH261-29M22 from chromoso... 46 0.15
5emb|CR735143.13| Zebrafish DNA sequence from clone CH211-244P16 ... 44 0.59
6emb|BX663519.12| Zebrafish DNA sequence from clone DKEY-182M1 in... 44 0.59
7gb|AF329639.1|AF329639 Drosophila virilis hairy 5' cis-regulator... 44 0.59
8emb|CR933780.12| Zebrafish DNA sequence from clone DKEY-60F6 in ... 44 0.59
9gb|AC169385.2| Mus musculus BAC clone RP23-247C1 from chromosome... 42 2.3
10gb|AC116412.19| Mus musculus chromosome 5, clone RP24-82A20, com... 42 2.3
11emb|CR376860.38| Zebrafish DNA sequence from clone DKEY-111H22 i... 42 2.3
12emb|Z81115.1|CET05D4 Caenorhabditis elegans Cosmid T05D4, comple... 42 2.3
13emb|AL592402.12| Human DNA sequence from clone RP11-554K11 on ch... 42 2.3
14gb|AC154606.2| Mus musculus BAC clone RP23-252E10 from chromosom... 42 2.3
15gb|AC154474.2| Mus musculus BAC clone RP24-122P10 from chromosom... 42 2.3
16gb|AC160932.3| Mus musculus BAC clone RP24-275L14 from chromosom... 42 2.3
17gb|AC004704.2|AC004704 Homo sapiens chromosome 4 clone B341C20 m... 42 2.3
18emb|BX005011.6| Zebrafish DNA sequence from clone CH211-59F19 in... 42 2.3
19gb|AC116763.11| Mus musculus chromosome 5, clone RP23-385G21, co... 42 2.3
20emb|BX001051.29| Zebrafish DNA sequence from clone DKEYP-68F9 in... 42 2.3
21gb|AC119269.9| Mus musculus chromosome 5, clone RP24-324B22, com... 40 9.1
22gb|AC149315.1| Phakopsora pachyrhizi clone JGIAFNA-101K13, compl... 40 9.1
23gb|AC007772.6| Drosophila melanogaster clone BACR19P12, complete... 40 9.1
24gb|AC008194.9| Drosophila melanogaster clone BACR49A05, complete... 40 9.1
25gb|AY190956.1| Drosophila virilis clone DVIF01_06_H02 (D1438) ge... 40 9.1
26gb|AC133087.3| Mus musculus BAC clone RP24-135I21 from chromosom... 40 9.1
27gb|AC121774.3| Mus musculus BAC clone RP23-350E1 from chromosome... 40 9.1
28gb|AC114822.7| Mus musculus BAC clone RP23-113A12 from 2, comple... 40 9.1
29ref|XM_547674.2| PREDICTED: Canis familiaris similar to Thioredo... 40 9.1
30emb|AL512587.13| Mouse DNA sequence from clone RP23-467P7 on chr... 40 9.1
31ref|XM_736781.1| Plasmodium chabaudi chabaudi mitochondrial carr... 40 9.1
32gb|AC140914.20| Medicago truncatula clone mth2-18h17, complete s... 40 9.1
33emb|AL031779.5|HS445N2 Human DNA sequence from clone RP3-445N2 o... 40 9.1
34emb|AL590100.6| Human DNA sequence from clone RP11-49O3 on chrom... 40 9.1
35emb|AL390763.13| Human DNA sequence from clone RP11-264E18 on ch... 40 9.1
36gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete ... 40 9.1
37emb|AL035251.11|HS705O1 Human DNA sequence from clone RP4-705O1 ... 40 9.1
38emb|AL031227.1|DMC66A1 Drosophila melanogaster cosmid 66A1 40 9.1
39gb|AC158752.5| Mus musculus chromosome 15, clone RP24-132H17, co... 40 9.1
40gb|AC165053.2| Phakopsora pachyrhizi clone JGIAFNA-1305N22, comp... 40 9.1
41emb|BX470081.7| Zebrafish DNA sequence from clone RP71-84P16, co... 40 9.1
42gb|AC114322.2| Homo sapiens chromosome 5 clone RP11-74D3, comple... 40 9.1
43gb|AC023747.4| Drosophila melanogaster X BAC RP98-38L1 (Roswell ... 40 9.1
44tpg|BK003210.1| TPA: TPA_inf: Drosophila melanogaster HDC19672 (... 40 9.1
45gb|AC114945.2| Homo sapiens chromosome 5 clone CTD-2604I2, compl... 40 9.1
46ref|NM_057784.4| Drosophila melanogaster Origin recognition comp... 40 9.1
47ref|NM_057326.4| Drosophila melanogaster pebbled CG12212-RA, tra... 40 9.1
48gb|AY089590.1| Drosophila melanogaster RE16687 full insert cDNA 40 9.1
49ref|NM_001014722.1| Drosophila melanogaster pebbled CG12212-RB, ... 40 9.1
50gb|AF438327.1| Homo sapiens alpha 1 type XXI collagen precursor ... 40 9.1
51gb|AC022118.5| Homo sapiens chromosome 5 clone CTC-548H10, compl... 40 9.1
52emb|BX510366.5| Zebrafish DNA sequence from clone DKEY-189P24 in... 40 9.1
53gb|AY058335.1| Drosophila melanogaster GH10905 full length cDNA 40 9.1
54gb|AC016623.6| Homo sapiens chromosome 5 clone CTD-2345N17, comp... 40 9.1
55emb|BX682556.5| Zebrafish DNA sequence from clone DKEY-105I19 in... 40 9.1
56gb|AC004668.1| Homo sapiens BAC clone CTA-276O3 from 7, complete... 40 9.1
57gb|AC073536.5| Homo sapiens chromosome 5 clone CTD-2068E4, compl... 40 9.1
58gb|AC092236.1|AC092236 Drosophila melanogaster, chromosome 2L, r... 40 9.1
59gb|AC092223.1|AC092223 Drosophila melanogaster, chromosome 2L, r... 40 9.1
60dbj|AK048812.1| Mus musculus 0 day neonate cerebellum cDNA, RIKE... 40 9.1
61dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.1
62gb|AC007771.7|AC007771 Drosophila melanogaster, chromosome 3R, r... 40 9.1
63emb|BX470215.5| Mouse DNA sequence from clone RP24-558L5 on chro... 40 9.1
64emb|BX842599.1| Neurospora crassa DNA linkage group II BAC clone... 40 9.1
65gb|AE003732.3| Drosophila melanogaster chromosome 3R, section 70... 40 9.1
66gb|AE003641.3| Drosophila melanogaster chromosome 2L, section 50... 40 9.1
67gb|AE003511.4| Drosophila melanogaster chromosome X, section 63 ... 40 9.1
68gb|AE003431.5| Drosophila melanogaster chromosome X, section 15 ... 40 9.1
69gb|AC122763.9| Mus musculus chromosome 19, clone RP24-68F2, comp... 40 9.1
70gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 9.1
71emb|AL732638.6|CNS08C9D Oryza sativa chromosome 12, . Partial se... 40 9.1
72gb|U86010.1|DMU86010 Drosophila zinc-finger nuclear protein hind... 40 9.1
73gb|AC149341.2| Phakopsora pachyrhizi clone JGIAFNA-25D19, comple... 40 9.1
74emb|CT025734.8| Mouse DNA sequence from clone RP24-375J21 on chr... 40 9.1
75emb|CT025681.8| Mouse DNA sequence from clone RP24-325P17 on chr... 40 9.1
76emb|AL929043.7| Mouse DNA sequence from clone RP23-58H6 on chrom... 40 9.1 
>gb|AC004629.1| Homo sapiens chromosome 5, BAC clone 87L18 (LBNL H97), complete sequence
          Length = 116019

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 514    gcaccatgtgaagggggcatgca 536
              |||||||||||||||||||||||
Sbjct: 109804 gcaccatgtgaagggggcatgca 109782
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>emb|AL691512.11| Mouse DNA sequence from clone RP23-440L5 on chromosome 4 Contains a CpG
             island, complete sequence
          Length = 206422

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 4     ttttaaaaacacttacatttaaa 26
             |||||||||||||||||||||||
Sbjct: 79444 ttttaaaaacacttacatttaaa 79466
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>gb|AC106781.2| Homo sapiens chromosome 5 clone RP11-346A9, complete sequence
          Length = 179284

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 514   gcaccatgtgaagggggcatgca 536
             |||||||||||||||||||||||
Sbjct: 11216 gcaccatgtgaagggggcatgca 11238
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>gb|AC145927.3| Gallus gallus BAC clone CH261-29M22 from chromosome unknown, complete
              sequence
          Length = 227692

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 421    aggttgaagctttgtttatgtagatga 447
              |||| ||||||||||||||||||||||
Sbjct: 197219 aggtagaagctttgtttatgtagatga 197193
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>emb|CR735143.13| Zebrafish DNA sequence from clone CH211-244P16 in linkage group 5,
             complete sequence
          Length = 147626

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 3     tttttaaaaacacttacatttaaaaa 28
             |||||||||||| |||||||||||||
Sbjct: 77135 tttttaaaaacatttacatttaaaaa 77110
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>emb|BX663519.12| Zebrafish DNA sequence from clone DKEY-182M1 in linkage group 15,
              complete sequence
          Length = 164720

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 3      tttttaaaaacacttacatttaaaaa 28
              |||||||||||||||| |||||||||
Sbjct: 132902 tttttaaaaacacttatatttaaaaa 132877
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>gb|AF329639.1|AF329639 Drosophila virilis hairy 5' cis-regulatory region sequence
          Length = 7119

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 571  ctgcgagtgcgactgcgactgcgcct 596
            |||||| |||||||||||||||||||
Sbjct: 3462 ctgcgactgcgactgcgactgcgcct 3487
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>emb|CR933780.12| Zebrafish DNA sequence from clone DKEY-60F6 in linkage group 5,
             complete sequence
          Length = 227454

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 3     tttttaaaaacacttacatttaaaaa 28
             |||||||||||| |||||||||||||
Sbjct: 75581 tttttaaaaacatttacatttaaaaa 75606
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>gb|AC169385.2| Mus musculus BAC clone RP23-247C1 from chromosome 16, complete sequence
          Length = 206814

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 433    tgtttatgtagatgagagagg 453
              |||||||||||||||||||||
Sbjct: 135791 tgtttatgtagatgagagagg 135771
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>gb|AC116412.19| Mus musculus chromosome 5, clone RP24-82A20, complete sequence
          Length = 191823

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 6      ttaaaaacacttacatttaaaaacc 30
              |||||||||||| ||||||||||||
Sbjct: 180554 ttaaaaacactttcatttaaaaacc 180578
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>emb|CR376860.38| Zebrafish DNA sequence from clone DKEY-111H22 in linkage group 8,
             complete sequence
          Length = 195545

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 202   agtttatgtaaatctgtagct 222
             |||||||||||||||||||||
Sbjct: 32795 agtttatgtaaatctgtagct 32815
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>emb|Z81115.1|CET05D4 Caenorhabditis elegans Cosmid T05D4, complete sequence
          Length = 32612

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 4    ttttaaaaacacttacatttaaaaa 28
            |||||||||||||||||||| ||||
Sbjct: 8796 ttttaaaaacacttacatttcaaaa 8820
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>emb|AL592402.12| Human DNA sequence from clone RP11-554K11 on chromosome 1 Contains a
             processed pseudogene similar to ribosomal protein L31
             (RPL31), complete sequence
          Length = 200461

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 396   tcacctcctattcttcagaaa 416
             |||||||||||||||||||||
Sbjct: 86603 tcacctcctattcttcagaaa 86623
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>gb|AC154606.2| Mus musculus BAC clone RP23-252E10 from chromosome 16, complete
             sequence
          Length = 181697

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 433   tgtttatgtagatgagagagg 453
             |||||||||||||||||||||
Sbjct: 36649 tgtttatgtagatgagagagg 36629
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>gb|AC154474.2| Mus musculus BAC clone RP24-122P10 from chromosome 16, complete
             sequence
          Length = 223585

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 333   tgctctgaagcctggatcatt 353
             |||||||||||||||||||||
Sbjct: 86831 tgctctgaagcctggatcatt 86811
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>gb|AC160932.3| Mus musculus BAC clone RP24-275L14 from chromosome 12, complete
             sequence
          Length = 177886

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 319   tctaattttctatctgctctg 339
             |||||||||||||||||||||
Sbjct: 32134 tctaattttctatctgctctg 32154
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>gb|AC004704.2|AC004704 Homo sapiens chromosome 4 clone B341C20 map 4q25, complete sequence
          Length = 134187

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 4     ttttaaaaacacttacattta 24
             |||||||||||||||||||||
Sbjct: 66228 ttttaaaaacacttacattta 66208
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>emb|BX005011.6| Zebrafish DNA sequence from clone CH211-59F19 in linkage group 23,
              complete sequence
          Length = 178148

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 7      taaaaacacttacatttaaaa 27
              |||||||||||||||||||||
Sbjct: 141653 taaaaacacttacatttaaaa 141673
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>gb|AC116763.11| Mus musculus chromosome 5, clone RP23-385G21, complete sequence
          Length = 196521

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 245    gggtttctttgggatcagaag 265
              |||||||||||||||||||||
Sbjct: 124530 gggtttctttgggatcagaag 124510
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>emb|BX001051.29| Zebrafish DNA sequence from clone DKEYP-68F9 in linkage group 9, complete
              sequence
          Length = 213486

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 1      aatttttaaaaacacttacatttaa 25
              ||||||| |||||||||||||||||
Sbjct: 201994 aattttttaaaacacttacatttaa 202018
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>gb|AC119269.9| Mus musculus chromosome 5, clone RP24-324B22, complete sequence
          Length = 172282

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 96    actttattgatataaagtag 115
             ||||||||||||||||||||
Sbjct: 10600 actttattgatataaagtag 10619
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>gb|AC149315.1| Phakopsora pachyrhizi clone JGIAFNA-101K13, complete sequence
          Length = 34485

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 430   ctttgtttatgtagatgaga 449
             ||||||||||||||||||||
Sbjct: 24243 ctttgtttatgtagatgaga 24262
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>gb|AC007772.6| Drosophila melanogaster clone BACR19P12, complete sequence
          Length = 186607

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 571   ctgcgagtgcgactgcgact 590
             ||||||||||||||||||||
Sbjct: 67178 ctgcgagtgcgactgcgact 67197
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>gb|AC008194.9| Drosophila melanogaster clone BACR49A05, complete sequence
          Length = 181437

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 571    ctgcgagtgcgactgcgactgcgc 594
              |||||| |||||||||||||||||
Sbjct: 114745 ctgcgactgcgactgcgactgcgc 114722
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>gb|AY190956.1| Drosophila virilis clone DVIF01_06_H02 (D1438) genomic sequence
          Length = 46427

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 571   ctgcgagtgcgactgcgactgcgcctcc 598
             |||||| |||||||||||||||| ||||
Sbjct: 21834 ctgcgactgcgactgcgactgcgactcc 21807
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>gb|AC133087.3| Mus musculus BAC clone RP24-135I21 from chromosome 13, complete
             sequence
          Length = 157768

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 4     ttttaaaaacacttacatttaaaa 27
             |||||||||||||| |||||||||
Sbjct: 31854 ttttaaaaacactttcatttaaaa 31877
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>gb|AC121774.3| Mus musculus BAC clone RP23-350E1 from chromosome 5, complete sequence
          Length = 191733

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 96     actttattgatataaagtag 115
              ||||||||||||||||||||
Sbjct: 148900 actttattgatataaagtag 148919
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>gb|AC114822.7| Mus musculus BAC clone RP23-113A12 from 2, complete sequence
          Length = 209762

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 10     aaacacttacatttaaaaac 29
              ||||||||||||||||||||
Sbjct: 158295 aaacacttacatttaaaaac 158314
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>ref|XM_547674.2| PREDICTED: Canis familiaris similar to Thioredoxin domain
           containing protein 2 (Spermatid-specific thioredoxin-1)
           (Sptrx-1) (LOC490552), mRNA
          Length = 1407

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 397 cacctcctattcttcagaaa 416
           ||||||||||||||||||||
Sbjct: 600 cacctcctattcttcagaaa 619
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>emb|AL512587.13| Mouse DNA sequence from clone RP23-467P7 on chromosome 2, complete
              sequence
          Length = 180204

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 462    gcaaagtcatgtgtgatgca 481
              ||||||||||||||||||||
Sbjct: 137512 gcaaagtcatgtgtgatgca 137493
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>ref|XM_736781.1| Plasmodium chabaudi chabaudi mitochondrial carrier protein,
           (PC000568.00.0) partial mRNA
          Length = 2304

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 1   aatttttaaaaacacttacattta 24
           |||||||||||||| |||||||||
Sbjct: 436 aatttttaaaaacatttacattta 413
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>gb|AC140914.20| Medicago truncatula clone mth2-18h17, complete sequence
          Length = 129792

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 10    aaacacttacatttaaaaac 29
             ||||||||||||||||||||
Sbjct: 25587 aaacacttacatttaaaaac 25568
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>emb|AL031779.5|HS445N2 Human DNA sequence from clone RP3-445N2 on chromosome 6p12.1-21.1
             Contains the 5' end of the COL21A1 gene for collagen, type
             XXI, alpha 1 (collagen XXI, collagen, type XX, alpha 1,
             COLA1L, COL20A1, DKFZp564B052) and part of a novel gene,
             complete sequence
          Length = 101010

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 494   ccctttgaacctggagggtt 513
             ||||||||||||||||||||
Sbjct: 59942 ccctttgaacctggagggtt 59961
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>emb|AL590100.6| Human DNA sequence from clone RP11-49O3 on chromosome 13 Contains a CpG
             island, complete sequence
          Length = 43138

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 5     tttaaaaacacttacatttaaaaa 28
             ||||||| ||||||||||||||||
Sbjct: 27713 tttaaaatcacttacatttaaaaa 27690
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>emb|AL390763.13| Human DNA sequence from clone RP11-264E18 on chromosome 10 Contains a
            novel gene, complete sequence
          Length = 162044

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 1    aatttttaaaaacacttaca 20
            ||||||||||||||||||||
Sbjct: 8774 aatttttaaaaacacttaca 8755
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>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 139    aactcacggccaatggccacaagg 162
              ||||| ||||||||||||||||||
Sbjct: 595040 aactcgcggccaatggccacaagg 595063
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>emb|AL035251.11|HS705O1 Human DNA sequence from clone RP4-705O1 on chromosome 20q11.2 Contains
             a novel gene, complete sequence
          Length = 161888

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 356   tacagtccactgggcttgag 375
             ||||||||||||||||||||
Sbjct: 97925 tacagtccactgggcttgag 97906
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>emb|AL031227.1|DMC66A1 Drosophila melanogaster cosmid 66A1
          Length = 34127

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 571   ctgcgagtgcgactgcgactgcgc 594
             |||||| |||||||||||||||||
Sbjct: 16331 ctgcgactgcgactgcgactgcgc 16354
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>gb|AC158752.5| Mus musculus chromosome 15, clone RP24-132H17, complete sequence
          Length = 159194

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 9     aaaacacttacatttaaaaa 28
             ||||||||||||||||||||
Sbjct: 72680 aaaacacttacatttaaaaa 72661
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>gb|AC165053.2| Phakopsora pachyrhizi clone JGIAFNA-1305N22, complete sequence
          Length = 40161

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 430   ctttgtttatgtagatgaga 449
             ||||||||||||||||||||
Sbjct: 29054 ctttgtttatgtagatgaga 29035
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>emb|BX470081.7| Zebrafish DNA sequence from clone RP71-84P16, complete sequence
          Length = 84546

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 3     tttttaaaaacacttacatttaaa 26
             |||||||||||||| |||||||||
Sbjct: 40649 tttttaaaaacactaacatttaaa 40672
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>gb|AC114322.2| Homo sapiens chromosome 5 clone RP11-74D3, complete sequence
          Length = 133348

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 55    cttaagaatttcctcaataa 74
             ||||||||||||||||||||
Sbjct: 22306 cttaagaatttcctcaataa 22287
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>gb|AC023747.4| Drosophila melanogaster X BAC RP98-38L1 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 167097

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 571   ctgcgagtgcgactgcgactgcgc 594
             |||||| |||||||||||||||||
Sbjct: 41853 ctgcgactgcgactgcgactgcgc 41876
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>tpg|BK003210.1| TPA: TPA_inf: Drosophila melanogaster HDC19672 (HDC19672) gene,
            complete cds
          Length = 2446

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 571  ctgcgagtgcgactgcgactgcgc 594
            |||||| |||||||||||||||||
Sbjct: 2361 ctgcgactgcgactgcgactgcgc 2338
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>gb|AC114945.2| Homo sapiens chromosome 5 clone CTD-2604I2, complete sequence
          Length = 129575

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 55    cttaagaatttcctcaataa 74
             ||||||||||||||||||||
Sbjct: 13892 cttaagaatttcctcaataa 13911
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>ref|NM_057784.4| Drosophila melanogaster Origin recognition complex subunit 5
           CG7833-RA (Orc5), mRNA
          Length = 1672

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 21  tttaaaaaccgaggaagtattttc 44
           |||| |||||||||||||||||||
Sbjct: 84  tttataaaccgaggaagtattttc 107
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>ref|NM_057326.4| Drosophila melanogaster pebbled CG12212-RA, transcript variant A
            (peb), mRNA
          Length = 6458

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 571  ctgcgagtgcgactgcgactgcgc 594
            |||||| |||||||||||||||||
Sbjct: 1554 ctgcgactgcgactgcgactgcgc 1531
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>gb|AY089590.1| Drosophila melanogaster RE16687 full insert cDNA
          Length = 1684

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 21  tttaaaaaccgaggaagtattttc 44
           |||| |||||||||||||||||||
Sbjct: 85  tttataaaccgaggaagtattttc 108
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>ref|NM_001014722.1| Drosophila melanogaster pebbled CG12212-RB, transcript variant B
            (peb), mRNA
          Length = 6453

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 571  ctgcgagtgcgactgcgactgcgc 594
            |||||| |||||||||||||||||
Sbjct: 1549 ctgcgactgcgactgcgactgcgc 1526
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>gb|AF438327.1| Homo sapiens alpha 1 type XXI collagen precursor (COL21A1) gene,
             complete cds, alternatively spliced
          Length = 381696

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 494   ccctttgaacctggagggtt 513
             ||||||||||||||||||||
Sbjct: 36189 ccctttgaacctggagggtt 36208
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>gb|AC022118.5| Homo sapiens chromosome 5 clone CTC-548H10, complete sequence
          Length = 104094

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 53    ctcttaagaatttcctcaat 72
             ||||||||||||||||||||
Sbjct: 77772 ctcttaagaatttcctcaat 77791
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>emb|BX510366.5| Zebrafish DNA sequence from clone DKEY-189P24 in linkage group 5,
            complete sequence
          Length = 179350

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 392  gtggtcacctcctattcttc 411
            ||||||||||||||||||||
Sbjct: 8381 gtggtcacctcctattcttc 8400
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>gb|AY058335.1| Drosophila melanogaster GH10905 full length cDNA
          Length = 6318

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 571  ctgcgagtgcgactgcgactgcgc 594
            |||||| |||||||||||||||||
Sbjct: 1518 ctgcgactgcgactgcgactgcgc 1495
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>gb|AC016623.6| Homo sapiens chromosome 5 clone CTD-2345N17, complete sequence
          Length = 153823

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 11    aacacttacatttaaaaacc 30
             ||||||||||||||||||||
Sbjct: 80024 aacacttacatttaaaaacc 80043
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>emb|BX682556.5| Zebrafish DNA sequence from clone DKEY-105I19 in linkage group 3,
              complete sequence
          Length = 244555

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 3      tttttaaaaacacttacatttaaa 26
              |||||||||||||| |||||||||
Sbjct: 184556 tttttaaaaacactaacatttaaa 184579
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>gb|AC004668.1| Homo sapiens BAC clone CTA-276O3 from 7, complete sequence
          Length = 112661

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 8     aaaaacacttacatttaaaa 27
             ||||||||||||||||||||
Sbjct: 25855 aaaaacacttacatttaaaa 25874
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>gb|AC073536.5| Homo sapiens chromosome 5 clone CTD-2068E4, complete sequence
          Length = 116993

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 11    aacacttacatttaaaaacc 30
             ||||||||||||||||||||
Sbjct: 77079 aacacttacatttaaaaacc 77098
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>gb|AC092236.1|AC092236 Drosophila melanogaster, chromosome 2L, region 34D-34D, BAC clone
              BACR30I21, complete sequence
          Length = 161682

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 21     tttaaaaaccgaggaagtattttc 44
              |||| |||||||||||||||||||
Sbjct: 159930 tttataaaccgaggaagtattttc 159953
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>gb|AC092223.1|AC092223 Drosophila melanogaster, chromosome 2L, region 34D-35X, BAC clone
             BACR16P12, complete sequence
          Length = 171598

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 21    tttaaaaaccgaggaagtattttc 44
             |||| |||||||||||||||||||
Sbjct: 27073 tttataaaccgaggaagtattttc 27096
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>dbj|AK048812.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length
            enriched library, clone:C230071P17 product:hypothetical
            protein, full insert sequence
          Length = 4525

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 462  gcaaagtcatgtgtgatgca 481
            ||||||||||||||||||||
Sbjct: 2120 gcaaagtcatgtgtgatgca 2101
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                               
Query: 16      ttacatttaaaaaccgaggaagtattttcttt 47
               ||||||| ||| || |||||||||||||||||
Sbjct: 3758293 ttacattaaaatacggaggaagtattttcttt 3758262
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>gb|AC007771.7|AC007771 Drosophila melanogaster, chromosome 3R, region 92E-92F, BAC clone
              BACR26M03, complete sequence
          Length = 197071

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 571    ctgcgagtgcgactgcgact 590
              ||||||||||||||||||||
Sbjct: 192928 ctgcgagtgcgactgcgact 192947
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>emb|BX470215.5| Mouse DNA sequence from clone RP24-558L5 on chromosome X, complete
              sequence
          Length = 137502

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 69     caataacttttatcattttg 88
              ||||||||||||||||||||
Sbjct: 113547 caataacttttatcattttg 113566
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>emb|BX842599.1| Neurospora crassa DNA linkage group II BAC clone B10A24
          Length = 85694

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 571   ctgcgagtgcgactgcgactgcgcctcc 598
             |||||| |||||||||||||||| ||||
Sbjct: 12469 ctgcgactgcgactgcgactgcgactcc 12442
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>gb|AE003732.3| Drosophila melanogaster chromosome 3R, section 70 of 118 of the
             complete sequence
          Length = 224529

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 571   ctgcgagtgcgactgcgact 590
             ||||||||||||||||||||
Sbjct: 29202 ctgcgagtgcgactgcgact 29221
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>gb|AE003641.3| Drosophila melanogaster chromosome 2L, section 50 of 83 of the complete
              sequence
          Length = 304772

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 21     tttaaaaaccgaggaagtattttc 44
              |||| |||||||||||||||||||
Sbjct: 176445 tttataaaccgaggaagtattttc 176468
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>gb|AE003511.4| Drosophila melanogaster chromosome X, section 63 of 74 of the complete
              sequence
          Length = 297969

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 571    ctgcgagtgcgactgcgactgcgc 594
              |||||| |||||||||||||||||
Sbjct: 103127 ctgcgactgcgactgcgactgcgc 103104
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>gb|AE003431.5| Drosophila melanogaster chromosome X, section 15 of 74 of the complete
              sequence
          Length = 310993

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 571    ctgcgagtgcgactgcgactgcgc 594
              |||||| |||||||||||||||||
Sbjct: 231846 ctgcgactgcgactgcgactgcgc 231823
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>gb|AC122763.9| Mus musculus chromosome 19, clone RP24-68F2, complete sequence
          Length = 176325

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 401    tcctattcttcagaaagctgaggttgaa 428
              |||||| |||||| ||||||||||||||
Sbjct: 117024 tcctatacttcaggaagctgaggttgaa 116997
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                               
Query: 16      ttacatttaaaaaccgaggaagtattttcttt 47
               ||||||| ||| || |||||||||||||||||
Sbjct: 3758267 ttacattaaaatacggaggaagtattttcttt 3758236
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>emb|AL732638.6|CNS08C9D Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBa0010K22
             of library OSJNBa from chromosome 12 of cultivar
             Nipponbare of ssp. japonica of Oryza sativa (rice),
             complete sequence
          Length = 92728

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 16    ttacatttaaaaaccgaggaagtattttcttt 47
             ||||||| ||| || |||||||||||||||||
Sbjct: 81752 ttacattaaaatacggaggaagtattttcttt 81783
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>gb|U86010.1|DMU86010 Drosophila zinc-finger nuclear protein hindsight, complete cds
          Length = 6188

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 571  ctgcgagtgcgactgcgactgcgc 594
            |||||| |||||||||||||||||
Sbjct: 1276 ctgcgactgcgactgcgactgcgc 1253
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>gb|AC149341.2| Phakopsora pachyrhizi clone JGIAFNA-25D19, complete sequence
          Length = 38997

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 430  ctttgtttatgtagatgaga 449
            ||||||||||||||||||||
Sbjct: 3334 ctttgtttatgtagatgaga 3353
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>emb|CT025734.8| Mouse DNA sequence from clone RP24-375J21 on chromosome 14, complete
              sequence
          Length = 187933

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 438    atgtagatgagagagggcct 457
              ||||||||||||||||||||
Sbjct: 157299 atgtagatgagagagggcct 157280
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>emb|CT025681.8| Mouse DNA sequence from clone RP24-325P17 on chromosome 14, complete
              sequence
          Length = 205581

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 389    tccgtggtcacctcctattcttca 412
              ||||||||| ||||||||||||||
Sbjct: 189140 tccgtggtctcctcctattcttca 189117
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>emb|AL929043.7| Mouse DNA sequence from clone RP23-58H6 on chromosome 2, complete
             sequence
          Length = 164834

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 10    aaacacttacatttaaaaac 29
             ||||||||||||||||||||
Sbjct: 62307 aaacacttacatttaaaaac 62326


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,689,703
Number of Sequences: 3902068
Number of extensions: 6689703
Number of successful extensions: 130663
Number of sequences better than 10.0: 76
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 130387
Number of HSP's gapped (non-prelim): 261
length of query: 669
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 646
effective length of database: 17,143,297,704
effective search space: 11074570316784
effective search space used: 11074570316784
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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