ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal4g07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT024116.1| Zea mays clone EL01N0509C06 mRNA sequence 327 3e-86
2ref|XM_479612.1| Oryza sativa (japonica cultivar-group), mRNA 248 2e-62
3dbj|AK101012.1| Oryza sativa (japonica cultivar-group) cDNA clon... 248 2e-62
4dbj|AK072158.1| Oryza sativa (japonica cultivar-group) cDNA clon... 248 2e-62
5dbj|AK060763.1| Oryza sativa (japonica cultivar-group) cDNA clon... 248 2e-62
6dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 165 2e-37
7dbj|AP004316.4| Oryza sativa (japonica cultivar-group) genomic D... 165 2e-37
8dbj|AP004333.3| Oryza sativa (japonica cultivar-group) genomic D... 165 2e-37
9gb|AY107085.1| Zea mays PCO110309 mRNA sequence 72 3e-09
10ref|NM_202529.1| Arabidopsis thaliana D-alanine-D-alanine ligase... 60 1e-05
11gb|AC154426.2| Mus musculus BAC clone RP24-199A21 from chromosom... 44 0.58
12gb|AC112975.14| Mus musculus chromosome 1, clone RP24-468G12, co... 44 0.58
13dbj|AB194084.1| Physcomitrella patens subsp. patens Ddl mRNA for... 44 0.58
14dbj|AB194083.1| Physcomitrella patens subsp. patens Ddl mRNA for... 44 0.58
15ref|NM_202530.1| Arabidopsis thaliana D-alanine-D-alanine ligase... 42 2.3
16ref|XM_389379.1| Gibberella zeae PH-1 chromosome 4 hypothetical ... 42 2.3
17gb|AC010871.7|ATAC010871 Arabidopsis thaliana chromosome III BAC... 42 2.3
18emb|AL162508.1|ATT7H20 Arabidopsis thaliana DNA chromosome 5, BA... 42 2.3
19emb|BX511307.7| Zebrafish DNA sequence from clone RP71-1A16 in l... 42 2.3
20emb|AL824713.9| Mouse DNA sequence from clone RP23-191F15 on chr... 42 2.3
21dbj|AK118847.1| Arabidopsis thaliana At3g08840 mRNA for unknown ... 42 2.3
22gb|AC183761.3| Pan troglodytes BAC clone CH251-710C5 from chromo... 40 9.1
23gb|AC122010.3| Mus musculus BAC clone RP24-349I15 from chromosom... 40 9.1
24ref|XM_800669.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 9.1
25emb|Z14048.1|AMWNT5B A.mexicanum mRNA encoding Wnt-5B protein 40 9.1
26ref|XM_814720.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 9.1
27ref|XM_814722.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 9.1
28ref|XM_797839.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 9.1
29gb|AC006013.3| Homo sapiens PAC clone RP5-945F2 from 7, complete... 40 9.1
30gb|CP000323.1| Psychrobacter cryohalolentis K5, complete genome 40 9.1
31emb|AL606483.10| Human DNA sequence from clone RP11-210I21 on ch... 40 9.1
32emb|AL356114.12| Human DNA sequence from clone RP11-257I14 on ch... 40 9.1
33gb|AC080043.5| Homo sapiens chromosome , clone RP11-45M9, comple... 40 9.1
34gb|AC023173.3| Mus musculus strain C57BL6/J chromosome 6 clone R... 40 9.1
35gb|AC023566.11| Homo sapiens chromosome 8, clone RP11-660D5, com... 40 9.1
36gb|AC010677.4| Homo sapiens chromosome 7 clone CTD-2304L4, compl... 40 9.1
37gb|AC129947.4| Branchiostoma floridae, clone -36D2, complete seq... 40 9.1
38gb|AC005523.1|AC005523 Homo sapiens chromosome 19, cosmid R28154... 40 9.1
39emb|CR956380.6| Pig DNA sequence from clone PigE-182G21 on chrom... 40 9.1
40emb|AL137228.4|CNS01DWJ Human chromosome 14 DNA sequence BAC R-3... 40 9.1 
>gb|BT024116.1| Zea mays clone EL01N0509C06 mRNA sequence
          Length = 1933

 Score =  327 bits (165), Expect = 3e-86
 Identities = 398/473 (84%), Gaps = 2/473 (0%)
 Strand = Plus / Minus

                                                                        
Query: 195  tgtgggggtagatgggcggttcctccgtgagtgcttggtggatcagaactgtggatggag 254
            |||||||||| | |||||||||||| | |||||||||||||||||| || ||||||||||
Sbjct: 1552 tgtgggggtacacgggcggttcctctgcgagtgcttggtggatcagcacggtggatggag 1493

                                                                        
Query: 255  tcatcccaggtacagtgttcacctctatcaacaacacctctccgctgcgcacgttaacaa 314
            ||||||||||||||||||| || || |||| || |||||| ||||| |||||||| ||||
Sbjct: 1492 tcatcccaggtacagtgttgacttcaatcagcagcacctccccgcttcgcacgttgacaa 1433

                                                                        
Query: 315  atgcgtcgatgcgcgaaaaaccctccagacccaatgtgttcgccatcatctcgatgcact 374
            |||| || ||||| || || || |||| ||| |  | ||| |||||  ||||||| | ||
Sbjct: 1432 atgcatcaatgcgtgagaagccttccaaacctagagcgtttgccatggtctcgatactct 1373

                                                                        
Query: 375  ttttgcacttctgaagcgcatcctcactcatgattgttgctggaggtggtgtcaagttga 434
            | |||||| |||| || |||||||| | ||| |||||||| |||||||||||||||||||
Sbjct: 1372 tcttgcacctctgcagagcatcctcgcccataattgttgcaggaggtggtgtcaagttga 1313

                                                                        
Query: 435  ttccagttccaccttgaaatttctcttcaagagacaaaatatcaccactttccttgactg 494
            ||||||| ||||||||||||||||| |||||||| ||||||||||||||||| || ||||
Sbjct: 1312 ttccagtgccaccttgaaatttctcctcaagagataaaatatcaccactttctttcactg 1253

                                                                        
Query: 495  tgatgcttggattcaacgaatgcatctccccacgtctgccgaccacaccaacagtcactt 554
            |||| |||||||| || || ||||| || |||||| |||| || |||||||| || | ||
Sbjct: 1252 tgatacttggatttaatgagtgcatttctccacgtttgccaactacaccaacggttattt 1193

                                                                        
Query: 555  caagccactcattctcgcccttccataccagatggcgggtactatcactcctc-gattta 613
            ||||||| ||||| || || |||||||| |||||||||| |||| || |||||  |||||
Sbjct: 1192 caagccagtcattttcacctttccatacaagatggcgggcactacca-tcctctaattta 1134

                                                                 
Query: 614  tttgagataataatttcgtccgtttcgataaatggttcgaatatcagtgactc 666
            ||||  || |||||||| || ||||| ||||| || || ||||| ||||||||
Sbjct: 1133 tttgcaatgataatttcatcggtttcaataaaaggctcaaatattagtgactc 1081
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>ref|XM_479612.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3252

 Score =  248 bits (125), Expect = 2e-62
 Identities = 253/293 (86%), Gaps = 2/293 (0%)
 Strand = Plus / Minus

                                                                        
Query: 375  ttttgcacttctgaagcgcatcctcactcatgattgttgctggaggtggtgtcaagttga 434
            ||||||||||||| || || ||||| ||||| |||||||  |||||||||||||||||||
Sbjct: 2879 ttttgcacttctgcagggcttcctcgctcataattgttgaaggaggtggtgtcaagttga 2820

                                                                        
Query: 435  ttccagttccaccttgaaatttctcttcaagagacaaaatatcaccactttccttgactg 494
            ||||||||||||||||||||||||| |||||||| ||||| ||||||||||| |||||||
Sbjct: 2819 ttccagttccaccttgaaatttctcctcaagagataaaatgtcaccactttctttgactg 2760

                                                                        
Query: 495  tgatgcttggattcaacgaatgcatctccccacgtctgccgaccacaccaacagtcactt 554
            |||| |||||||| |  ||  |||| || |||||| |||| || ||||||||||||||||
Sbjct: 2759 tgatacttggatttagtgacagcatttctccacgtttgccaactacaccaacagtcactt 2700

                                                                        
Query: 555  caagccactcattctcgcccttccataccagatggcgggtactatcactcctc-gattta 613
            ||||||| | ||| || ||||||||||||||||| ||||| |||||| ||| | ||||| 
Sbjct: 2699 caagccatttattttcccccttccataccagatgtcgggtgctatca-tccactgatttg 2641

                                                                 
Query: 614  tttgagataataatttcgtccgtttcgataaatggttcgaatatcagtgactc 666
             |||| || |||||||| || ||||| ||||| ||||| ||||||||||||||
Sbjct: 2640 gttgaaatgataatttcatcggtttcaataaaaggttcaaatatcagtgactc 2588



 Score =  115 bits (58), Expect = 2e-22
 Identities = 112/130 (86%)
 Strand = Plus / Minus

                                                                        
Query: 155  gcccttgcaaacgctagatcgaggagtgttctgaagaatttgtgggggtagatgggcggt 214
            |||||||||||||| ||||| || || || | ||| || |||||||| |||||||| |||
Sbjct: 3099 gcccttgcaaacgccagatcaagaagcgtccggaaaaacttgtggggatagatgggtggt 3040

                                                                        
Query: 215  tcctccgtgagtgcttggtggatcagaactgtggatggagtcatcccaggtacagtgttc 274
            | |||||| ||||| ||||| ||||| || |||||||||||||||||||| |||||||| 
Sbjct: 3039 ttctccgtcagtgcctggtgaatcagtacagtggatggagtcatcccaggaacagtgttt 2980

                      
Query: 275  acctctatca 284
            ||||||||||
Sbjct: 2979 acctctatca 2970
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>dbj|AK101012.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023148P17, full
            insert sequence
          Length = 3252

 Score =  248 bits (125), Expect = 2e-62
 Identities = 253/293 (86%), Gaps = 2/293 (0%)
 Strand = Plus / Minus

                                                                        
Query: 375  ttttgcacttctgaagcgcatcctcactcatgattgttgctggaggtggtgtcaagttga 434
            ||||||||||||| || || ||||| ||||| |||||||  |||||||||||||||||||
Sbjct: 2879 ttttgcacttctgcagggcttcctcgctcataattgttgaaggaggtggtgtcaagttga 2820

                                                                        
Query: 435  ttccagttccaccttgaaatttctcttcaagagacaaaatatcaccactttccttgactg 494
            ||||||||||||||||||||||||| |||||||| ||||| ||||||||||| |||||||
Sbjct: 2819 ttccagttccaccttgaaatttctcctcaagagataaaatgtcaccactttctttgactg 2760

                                                                        
Query: 495  tgatgcttggattcaacgaatgcatctccccacgtctgccgaccacaccaacagtcactt 554
            |||| |||||||| |  ||  |||| || |||||| |||| || ||||||||||||||||
Sbjct: 2759 tgatacttggatttagtgacagcatttctccacgtttgccaactacaccaacagtcactt 2700

                                                                        
Query: 555  caagccactcattctcgcccttccataccagatggcgggtactatcactcctc-gattta 613
            ||||||| | ||| || ||||||||||||||||| ||||| |||||| ||| | ||||| 
Sbjct: 2699 caagccatttattttcccccttccataccagatgtcgggtgctatca-tccactgatttg 2641

                                                                 
Query: 614  tttgagataataatttcgtccgtttcgataaatggttcgaatatcagtgactc 666
             |||| || |||||||| || ||||| ||||| ||||| ||||||||||||||
Sbjct: 2640 gttgaaatgataatttcatcggtttcaataaaaggttcaaatatcagtgactc 2588



 Score =  115 bits (58), Expect = 2e-22
 Identities = 112/130 (86%)
 Strand = Plus / Minus

                                                                        
Query: 155  gcccttgcaaacgctagatcgaggagtgttctgaagaatttgtgggggtagatgggcggt 214
            |||||||||||||| ||||| || || || | ||| || |||||||| |||||||| |||
Sbjct: 3099 gcccttgcaaacgccagatcaagaagcgtccggaaaaacttgtggggatagatgggtggt 3040

                                                                        
Query: 215  tcctccgtgagtgcttggtggatcagaactgtggatggagtcatcccaggtacagtgttc 274
            | |||||| ||||| ||||| ||||| || |||||||||||||||||||| |||||||| 
Sbjct: 3039 ttctccgtcagtgcctggtgaatcagtacagtggatggagtcatcccaggaacagtgttt 2980

                      
Query: 275  acctctatca 284
            ||||||||||
Sbjct: 2979 acctctatca 2970
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>dbj|AK072158.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013131J23, full
            insert sequence
          Length = 3051

 Score =  248 bits (125), Expect = 2e-62
 Identities = 253/293 (86%), Gaps = 2/293 (0%)
 Strand = Plus / Minus

                                                                        
Query: 375  ttttgcacttctgaagcgcatcctcactcatgattgttgctggaggtggtgtcaagttga 434
            ||||||||||||| || || ||||| ||||| |||||||  |||||||||||||||||||
Sbjct: 2601 ttttgcacttctgcagggcttcctcgctcataattgttgaaggaggtggtgtcaagttga 2542

                                                                        
Query: 435  ttccagttccaccttgaaatttctcttcaagagacaaaatatcaccactttccttgactg 494
            ||||||||||||||||||||||||| |||||||| ||||| ||||||||||| |||||||
Sbjct: 2541 ttccagttccaccttgaaatttctcctcaagagataaaatgtcaccactttctttgactg 2482

                                                                        
Query: 495  tgatgcttggattcaacgaatgcatctccccacgtctgccgaccacaccaacagtcactt 554
            |||| |||||||| |  ||  |||| || |||||| |||| || ||||||||||||||||
Sbjct: 2481 tgatacttggatttagtgacagcatttctccacgtttgccaactacaccaacagtcactt 2422

                                                                        
Query: 555  caagccactcattctcgcccttccataccagatggcgggtactatcactcctc-gattta 613
            ||||||| | ||| || ||||||||||||||||| ||||| |||||| ||| | ||||| 
Sbjct: 2421 caagccatttattttcccccttccataccagatgtcgggtgctatca-tccactgatttg 2363

                                                                 
Query: 614  tttgagataataatttcgtccgtttcgataaatggttcgaatatcagtgactc 666
             |||| || |||||||| || ||||| ||||| ||||| ||||||||||||||
Sbjct: 2362 gttgaaatgataatttcatcggtttcaataaaaggttcaaatatcagtgactc 2310



 Score =  115 bits (58), Expect = 2e-22
 Identities = 112/130 (86%)
 Strand = Plus / Minus

                                                                        
Query: 155  gcccttgcaaacgctagatcgaggagtgttctgaagaatttgtgggggtagatgggcggt 214
            |||||||||||||| ||||| || || || | ||| || |||||||| |||||||| |||
Sbjct: 2821 gcccttgcaaacgccagatcaagaagcgtccggaaaaacttgtggggatagatgggtggt 2762

                                                                        
Query: 215  tcctccgtgagtgcttggtggatcagaactgtggatggagtcatcccaggtacagtgttc 274
            | |||||| ||||| ||||| ||||| || |||||||||||||||||||| |||||||| 
Sbjct: 2761 ttctccgtcagtgcctggtgaatcagtacagtggatggagtcatcccaggaacagtgttt 2702

                      
Query: 275  acctctatca 284
            ||||||||||
Sbjct: 2701 acctctatca 2692
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>dbj|AK060763.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-A05, full
            insert sequence
          Length = 1720

 Score =  248 bits (125), Expect = 2e-62
 Identities = 253/293 (86%), Gaps = 2/293 (0%)
 Strand = Plus / Minus

                                                                        
Query: 375  ttttgcacttctgaagcgcatcctcactcatgattgttgctggaggtggtgtcaagttga 434
            ||||||||||||| || || ||||| ||||| |||||||  |||||||||||||||||||
Sbjct: 1270 ttttgcacttctgcagggcttcctcgctcataattgttgaaggaggtggtgtcaagttga 1211

                                                                        
Query: 435  ttccagttccaccttgaaatttctcttcaagagacaaaatatcaccactttccttgactg 494
            ||||||||||||||||||||||||| |||||||| ||||| ||||||||||| |||||||
Sbjct: 1210 ttccagttccaccttgaaatttctcctcaagagataaaatgtcaccactttctttgactg 1151

                                                                        
Query: 495  tgatgcttggattcaacgaatgcatctccccacgtctgccgaccacaccaacagtcactt 554
            |||| |||||||| |  ||  |||| || |||||| |||| || ||||||||||||||||
Sbjct: 1150 tgatacttggatttagtgacagcatttctccacgtttgccaactacaccaacagtcactt 1091

                                                                        
Query: 555  caagccactcattctcgcccttccataccagatggcgggtactatcactcctc-gattta 613
            ||||||| | ||| || ||||||||||||||||| ||||| |||||| ||| | ||||| 
Sbjct: 1090 caagccatttattttcccccttccataccagatgtcgggtgctatca-tccactgatttg 1032

                                                                 
Query: 614  tttgagataataatttcgtccgtttcgataaatggttcgaatatcagtgactc 666
             |||| || |||||||| || ||||| ||||| ||||| ||||||||||||||
Sbjct: 1031 gttgaaatgataatttcatcggtttcaataaaaggttcaaatatcagtgactc 979



 Score =  115 bits (58), Expect = 2e-22
 Identities = 112/130 (86%)
 Strand = Plus / Minus

                                                                        
Query: 155  gcccttgcaaacgctagatcgaggagtgttctgaagaatttgtgggggtagatgggcggt 214
            |||||||||||||| ||||| || || || | ||| || |||||||| |||||||| |||
Sbjct: 1490 gcccttgcaaacgccagatcaagaagcgtccggaaaaacttgtggggatagatgggtggt 1431

                                                                        
Query: 215  tcctccgtgagtgcttggtggatcagaactgtggatggagtcatcccaggtacagtgttc 274
            | |||||| ||||| ||||| ||||| || |||||||||||||||||||| |||||||| 
Sbjct: 1430 ttctccgtcagtgcctggtgaatcagtacagtggatggagtcatcccaggaacagtgttt 1371

                      
Query: 275  acctctatca 284
            ||||||||||
Sbjct: 1370 acctctatca 1361
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  165 bits (83), Expect = 2e-37
 Identities = 190/223 (85%), Gaps = 2/223 (0%)
 Strand = Plus / Minus

                                                                            
Query: 445      accttgaaatttctcttcaagagacaaaatatcaccactttccttgactgtgatgcttgg 504
                ||||||||||||||| |||||||| ||||| ||||||||||| ||||||||||| |||||
Sbjct: 29346871 accttgaaatttctcctcaagagataaaatgtcaccactttctttgactgtgatacttgg 29346812

                                                                            
Query: 505      attcaacgaatgcatctccccacgtctgccgaccacaccaacagtcacttcaagccactc 564
                ||| |  ||  |||| || |||||| |||| || ||||||||||||||||||||||| | 
Sbjct: 29346811 atttagtgacagcatttctccacgtttgccaactacaccaacagtcacttcaagccattt 29346752

                                                                            
Query: 565      attctcgcccttccataccagatggcgggtactatcactcctc-gatttatttgagataa 623
                ||| || ||||||||||||||||| ||||| |||||| ||| | |||||  |||| || |
Sbjct: 29346751 attttcccccttccataccagatgtcgggtgctatca-tccactgatttggttgaaatga 29346693

                                                           
Query: 624      taatttcgtccgtttcgataaatggttcgaatatcagtgactc 666
                ||||||| || ||||| ||||| ||||| ||||||||||||||
Sbjct: 29346692 taatttcatcggtttcaataaaaggttcaaatatcagtgactc 29346650



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 50/54 (92%)
 Strand = Plus / Minus

                                                                      
Query: 401      ctcatgattgttgctggaggtggtgtcaagttgattccagttccaccttgaaat 454
                ||||| |||||||  ||||||||||||||||||||||||||||||||| |||||
Sbjct: 29347461 ctcataattgttgaaggaggtggtgtcaagttgattccagttccacctggaaat 29347408



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 50/55 (90%)
 Strand = Plus / Minus

                                                                       
Query: 230      tggtggatcagaactgtggatggagtcatcccaggtacagtgttcacctctatca 284
                ||||| ||||| || |||||||||||||||||||| |||||||| ||||||||||
Sbjct: 29347881 tggtgaatcagtacagtggatggagtcatcccaggaacagtgtttacctctatca 29347827



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 62/74 (83%)
 Strand = Plus / Minus

                                                                            
Query: 155      gcccttgcaaacgctagatcgaggagtgttctgaagaatttgtgggggtagatgggcggt 214
                |||||||||||||| ||||| || || || | ||| || |||||||| |||||||| |||
Sbjct: 29348080 gcccttgcaaacgccagatcaagaagcgtccggaaaaacttgtggggatagatgggtggt 29348021

                              
Query: 215      tcctccgtgagtgc 228
                | |||||| |||||
Sbjct: 29348020 ttctccgtcagtgc 29348007
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>dbj|AP004316.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0597G07
          Length = 152928

 Score =  165 bits (83), Expect = 2e-37
 Identities = 190/223 (85%), Gaps = 2/223 (0%)
 Strand = Plus / Minus

                                                                          
Query: 445    accttgaaatttctcttcaagagacaaaatatcaccactttccttgactgtgatgcttgg 504
              ||||||||||||||| |||||||| ||||| ||||||||||| ||||||||||| |||||
Sbjct: 135560 accttgaaatttctcctcaagagataaaatgtcaccactttctttgactgtgatacttgg 135501

                                                                          
Query: 505    attcaacgaatgcatctccccacgtctgccgaccacaccaacagtcacttcaagccactc 564
              ||| |  ||  |||| || |||||| |||| || ||||||||||||||||||||||| | 
Sbjct: 135500 atttagtgacagcatttctccacgtttgccaactacaccaacagtcacttcaagccattt 135441

                                                                          
Query: 565    attctcgcccttccataccagatggcgggtactatcactcctc-gatttatttgagataa 623
              ||| || ||||||||||||||||| ||||| |||||| ||| | |||||  |||| || |
Sbjct: 135440 attttcccccttccataccagatgtcgggtgctatca-tccactgatttggttgaaatga 135382

                                                         
Query: 624    taatttcgtccgtttcgataaatggttcgaatatcagtgactc 666
              ||||||| || ||||| ||||| ||||| ||||||||||||||
Sbjct: 135381 taatttcatcggtttcaataaaaggttcaaatatcagtgactc 135339



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 50/54 (92%)
 Strand = Plus / Minus

                                                                    
Query: 401    ctcatgattgttgctggaggtggtgtcaagttgattccagttccaccttgaaat 454
              ||||| |||||||  ||||||||||||||||||||||||||||||||| |||||
Sbjct: 136150 ctcataattgttgaaggaggtggtgtcaagttgattccagttccacctggaaat 136097



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 50/55 (90%)
 Strand = Plus / Minus

                                                                     
Query: 230    tggtggatcagaactgtggatggagtcatcccaggtacagtgttcacctctatca 284
              ||||| ||||| || |||||||||||||||||||| |||||||| ||||||||||
Sbjct: 136570 tggtgaatcagtacagtggatggagtcatcccaggaacagtgtttacctctatca 136516



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 62/74 (83%)
 Strand = Plus / Minus

                                                                          
Query: 155    gcccttgcaaacgctagatcgaggagtgttctgaagaatttgtgggggtagatgggcggt 214
              |||||||||||||| ||||| || || || | ||| || |||||||| |||||||| |||
Sbjct: 136769 gcccttgcaaacgccagatcaagaagcgtccggaaaaacttgtggggatagatgggtggt 136710

                            
Query: 215    tcctccgtgagtgc 228
              | |||||| |||||
Sbjct: 136709 ttctccgtcagtgc 136696
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>dbj|AP004333.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
            clone:P0034A04
          Length = 151263

 Score =  165 bits (83), Expect = 2e-37
 Identities = 190/223 (85%), Gaps = 2/223 (0%)
 Strand = Plus / Minus

                                                                        
Query: 445  accttgaaatttctcttcaagagacaaaatatcaccactttccttgactgtgatgcttgg 504
            ||||||||||||||| |||||||| ||||| ||||||||||| ||||||||||| |||||
Sbjct: 9793 accttgaaatttctcctcaagagataaaatgtcaccactttctttgactgtgatacttgg 9734

                                                                        
Query: 505  attcaacgaatgcatctccccacgtctgccgaccacaccaacagtcacttcaagccactc 564
            ||| |  ||  |||| || |||||| |||| || ||||||||||||||||||||||| | 
Sbjct: 9733 atttagtgacagcatttctccacgtttgccaactacaccaacagtcacttcaagccattt 9674

                                                                        
Query: 565  attctcgcccttccataccagatggcgggtactatcactcctc-gatttatttgagataa 623
            ||| || ||||||||||||||||| ||||| |||||| ||| | |||||  |||| || |
Sbjct: 9673 attttcccccttccataccagatgtcgggtgctatca-tccactgatttggttgaaatga 9615

                                                       
Query: 624  taatttcgtccgtttcgataaatggttcgaatatcagtgactc 666
            ||||||| || ||||| ||||| ||||| ||||||||||||||
Sbjct: 9614 taatttcatcggtttcaataaaaggttcaaatatcagtgactc 9572



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 50/54 (92%)
 Strand = Plus / Minus

                                                                   
Query: 401   ctcatgattgttgctggaggtggtgtcaagttgattccagttccaccttgaaat 454
             ||||| |||||||  ||||||||||||||||||||||||||||||||| |||||
Sbjct: 10383 ctcataattgttgaaggaggtggtgtcaagttgattccagttccacctggaaat 10330



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 50/55 (90%)
 Strand = Plus / Minus

                                                                    
Query: 230   tggtggatcagaactgtggatggagtcatcccaggtacagtgttcacctctatca 284
             ||||| ||||| || |||||||||||||||||||| |||||||| ||||||||||
Sbjct: 10803 tggtgaatcagtacagtggatggagtcatcccaggaacagtgtttacctctatca 10749



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 62/74 (83%)
 Strand = Plus / Minus

                                                                         
Query: 155   gcccttgcaaacgctagatcgaggagtgttctgaagaatttgtgggggtagatgggcggt 214
             |||||||||||||| ||||| || || || | ||| || |||||||| |||||||| |||
Sbjct: 11002 gcccttgcaaacgccagatcaagaagcgtccggaaaaacttgtggggatagatgggtggt 10943

                           
Query: 215   tcctccgtgagtgc 228
             | |||||| |||||
Sbjct: 10942 ttctccgtcagtgc 10929
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>gb|AY107085.1| Zea mays PCO110309 mRNA sequence
          Length = 458

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 54/60 (90%)
 Strand = Plus / Minus

                                                                       
Query: 195 tgtgggggtagatgggcggttcctccgtgagtgcttggtggatcagaactgtggatggag 254
           |||||||||| | |||||||||||| | |||||||||||||||||| || ||||||||||
Sbjct: 67  tgtgggggtacacgggcggttcctctgcgagtgcttggtggatcagcacggtggatggag 8
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>ref|NM_202529.1| Arabidopsis thaliana D-alanine-D-alanine ligase AT3G08840 transcript
            variant AT3G08840.2 mRNA, complete cds
          Length = 2844

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 81/98 (82%)
 Strand = Plus / Minus

                                                                        
Query: 395  tcctcactcatgattgttgctggaggtggtgtcaagttgattccagttccaccttgaaat 454
            |||| |||||||||||||| ||||||||| || |  || || ||||| || ||||| || 
Sbjct: 2597 tccttactcatgattgttggtggaggtggagtaagatttatgccagtgcctccttggaac 2538

                                                  
Query: 455  ttctcttcaagagacaaaatatcaccactttccttgac 492
            || || || |||||||| ||||| ||||||||||||||
Sbjct: 2537 ttttcctcgagagacaatatatccccactttccttgac 2500
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>gb|AC154426.2| Mus musculus BAC clone RP24-199A21 from chromosome 14, complete
             sequence
          Length = 210568

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 463   aagagacaaaatatcaccactttcct 488
             ||||||||||||||||||| ||||||
Sbjct: 31648 aagagacaaaatatcaccagtttcct 31623
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>gb|AC112975.14| Mus musculus chromosome 1, clone RP24-468G12, complete sequence
          Length = 175974

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 449   tgaaatttctcttcaagagaca 470
             ||||||||||||||||||||||
Sbjct: 68128 tgaaatttctcttcaagagaca 68107
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>dbj|AB194084.1| Physcomitrella patens subsp. patens Ddl mRNA for D-alanine-D-alanine
            ligase, complete cds, clone:pphn15g11
          Length = 3677

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 440  gttccaccttgaaatttctcttcaag 465
            ||||||||||||||||| ||||||||
Sbjct: 3173 gttccaccttgaaatttttcttcaag 3148
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>dbj|AB194083.1| Physcomitrella patens subsp. patens Ddl mRNA for D-alanine-D-alanine
            ligase, complete cds, clone:pphn26i23
          Length = 3279

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 440  gttccaccttgaaatttctcttcaag 465
            ||||||||||||||||| ||||||||
Sbjct: 2899 gttccaccttgaaatttttcttcaag 2874
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>ref|NM_202530.1| Arabidopsis thaliana D-alanine-D-alanine ligase AT3G08840 transcript
            variant AT3G08840.3 mRNA, complete cds
          Length = 2791

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 395  tcctcactcatgattgttgctggaggtgg 423
            |||| |||||||||||||| |||||||||
Sbjct: 2624 tccttactcatgattgttggtggaggtgg 2596



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 464  agagacaaaatatcaccactttccttgac 492
            |||||||| ||||| ||||||||||||||
Sbjct: 2528 agagacaatatatccccactttccttgac 2500
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>ref|XM_389379.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG09203.1)
            partial mRNA
          Length = 3189

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 415  tggaggtggtgtcaagttgat 435
            |||||||||||||||||||||
Sbjct: 2724 tggaggtggtgtcaagttgat 2744
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>gb|AC010871.7|ATAC010871 Arabidopsis thaliana chromosome III BAC T16O11 genomic sequence,
             complete sequence
          Length = 80381

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 464   agagacaaaatatcaccactttccttgac 492
             |||||||| ||||| ||||||||||||||
Sbjct: 75862 agagacaatatatccccactttccttgac 75834
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>emb|AL162508.1|ATT7H20 Arabidopsis thaliana DNA chromosome 5, BAC clone T7H20 (ESSA project)
          Length = 87581

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 106   tatatgtatatatctttcttgtttt 130
             ||||| |||||||||||||||||||
Sbjct: 30585 tatatatatatatctttcttgtttt 30561
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>emb|BX511307.7| Zebrafish DNA sequence from clone RP71-1A16 in linkage group 17,
             complete sequence
          Length = 31986

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 105   ttatatgtatatatctttctt 125
             |||||||||||||||||||||
Sbjct: 19911 ttatatgtatatatctttctt 19891
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>emb|AL824713.9| Mouse DNA sequence from clone RP23-191F15 on chromosome X, complete
              sequence
          Length = 163119

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 458    tcttcaagagacaaaatatca 478
              |||||||||||||||||||||
Sbjct: 156152 tcttcaagagacaaaatatca 156172
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>dbj|AK118847.1| Arabidopsis thaliana At3g08840 mRNA for unknown protein, complete
            cds, clone: RAFL21-17-J10
          Length = 3029

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 395  tcctcactcatgattgttgctggaggtgg 423
            |||| |||||||||||||| |||||||||
Sbjct: 2618 tccttactcatgattgttggtggaggtgg 2590



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 464  agagacaaaatatcaccactttccttgac 492
            |||||||| ||||| ||||||||||||||
Sbjct: 2522 agagacaatatatccccactttccttgac 2494
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>gb|AC183761.3| Pan troglodytes BAC clone CH251-710C5 from chromosome 7, complete
              sequence
          Length = 205916

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 609    atttatttgagataataatt 628
              ||||||||||||||||||||
Sbjct: 113119 atttatttgagataataatt 113100
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>gb|AC122010.3| Mus musculus BAC clone RP24-349I15 from chromosome 8, complete sequence
          Length = 198118

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 108   tatgtatatatctttcttgttttt 131
             ||||||||||| ||||||||||||
Sbjct: 52726 tatgtatatatgtttcttgttttt 52749
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>ref|XM_800669.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053509713.20) partial mRNA
          Length = 1563

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 493  tgtgatgcttggattcaacg 512
            ||||||||||||||||||||
Sbjct: 1422 tgtgatgcttggattcaacg 1441
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>emb|Z14048.1|AMWNT5B A.mexicanum mRNA encoding Wnt-5B protein
          Length = 2664

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 362  atctcgatgcactttttgcacttc 385
            |||||| |||||||||||||||||
Sbjct: 1153 atctcggtgcactttttgcacttc 1130
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>ref|XM_814720.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053508799.260) partial mRNA
          Length = 1746

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 493  tgtgatgcttggattcaacg 512
            ||||||||||||||||||||
Sbjct: 1605 tgtgatgcttggattcaacg 1624
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>ref|XM_814722.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053508799.280) partial mRNA
          Length = 1725

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 493  tgtgatgcttggattcaacg 512
            ||||||||||||||||||||
Sbjct: 1584 tgtgatgcttggattcaacg 1603
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>ref|XM_797839.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053508801.10) partial mRNA
          Length = 1119

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 493 tgtgatgcttggattcaacg 512
           ||||||||||||||||||||
Sbjct: 978 tgtgatgcttggattcaacg 997
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>gb|AC006013.3| Homo sapiens PAC clone RP5-945F2 from 7, complete sequence
          Length = 159002

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 609    atttatttgagataataatt 628
              ||||||||||||||||||||
Sbjct: 122196 atttatttgagataataatt 122177
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>gb|CP000323.1| Psychrobacter cryohalolentis K5, complete genome
          Length = 3059876

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 78      atcgacgcgcgccacggcta 97
               ||||||||||||||||||||
Sbjct: 1557449 atcgacgcgcgccacggcta 1557430
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>emb|AL606483.10| Human DNA sequence from clone RP11-210I21 on chromosome 1, complete
             sequence
          Length = 28437

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 112   tatatatctttcttgttttt 131
             ||||||||||||||||||||
Sbjct: 26130 tatatatctttcttgttttt 26149
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>emb|AL356114.12| Human DNA sequence from clone RP11-257I14 on chromosome 10 Contains
             part of the PCDH15 gene for protocadherin 15 and the 3'
             end of a novel gene, complete sequence
          Length = 124856

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 106   tatatgtatatatctttcttgttt 129
             |||||||||||| |||||||||||
Sbjct: 76488 tatatgtatatagctttcttgttt 76465
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>gb|AC080043.5| Homo sapiens chromosome , clone RP11-45M9, complete sequence
          Length = 161443

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 394   atcctcactcatgattgttg 413
             ||||||||||||||||||||
Sbjct: 60038 atcctcactcatgattgttg 60057
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>gb|AC023173.3| Mus musculus strain C57BL6/J chromosome 6 clone RP23-11G22, complete
              sequence
          Length = 203451

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 107    atatgtatatatctttcttgtttt 130
              ||||||| ||||||||||||||||
Sbjct: 110516 atatgtacatatctttcttgtttt 110493
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>gb|AC023566.11| Homo sapiens chromosome 8, clone RP11-660D5, complete sequence
          Length = 184543

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 394    atcctcactcatgattgttg 413
              ||||||||||||||||||||
Sbjct: 109594 atcctcactcatgattgttg 109613
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>gb|AC010677.4| Homo sapiens chromosome 7 clone CTD-2304L4, complete sequence
          Length = 112659

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 105   ttatatgtatatatctttcttgtt 128
             |||||||| |||||||||||||||
Sbjct: 82312 ttatatgtttatatctttcttgtt 82335
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>gb|AC129947.4| Branchiostoma floridae, clone -36D2, complete sequence
          Length = 67258

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 106   tatatgtatatatctttctt 125
             ||||||||||||||||||||
Sbjct: 19246 tatatgtatatatctttctt 19227
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>gb|AC005523.1|AC005523 Homo sapiens chromosome 19, cosmid R28154, complete sequence
          Length = 41468

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 115   atatctttcttgtttttaag 134
             ||||||||||||||||||||
Sbjct: 15508 atatctttcttgtttttaag 15527
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>emb|CR956380.6| Pig DNA sequence from clone PigE-182G21 on chromosome 17, complete
             sequence
          Length = 91578

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 311   acaaatgcgtcgatgcgcga 330
             ||||||||||||||||||||
Sbjct: 23810 acaaatgcgtcgatgcgcga 23791
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>emb|AL137228.4|CNS01DWJ Human chromosome 14 DNA sequence BAC R-369N15 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 160901

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 611    ttatttgagataataatttc 630
              ||||||||||||||||||||
Sbjct: 106122 ttatttgagataataatttc 106141


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,872,900
Number of Sequences: 3902068
Number of extensions: 5872900
Number of successful extensions: 111176
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 111028
Number of HSP's gapped (non-prelim): 132
length of query: 668
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 645
effective length of database: 17,143,297,704
effective search space: 11057427019080
effective search space used: 11057427019080
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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