| Clone Name | rbaal4f17 |
|---|---|
| Clone Library Name | barley_pub |
>JI60_HORVU (Q00531) 60 kDa jasmonate-induced protein (EC 3.2.2.22) (rRNA| N-glycosidase) Length = 560 Score = 236 bits (601), Expect = 5e-62 Identities = 123/143 (86%), Positives = 126/143 (88%) Frame = -1 Query: 600 ETVHTCYGPAEVIYAVLSNGVQGRVDVKLARLQSRDEEDLVGRIVARSKLFDVGCVLFYK 421 ETV T GPAEVIYAVLSNGVQGRVDVKLA LQSRDE LVGRIVARSKLFD GCVLFY Sbjct: 420 ETVLTRCGPAEVIYAVLSNGVQGRVDVKLAGLQSRDEVVLVGRIVARSKLFDFGCVLFYN 479 Query: 420 EAADKGVHVRPGELVPLARHALAVPLHIPLTIELDLHRGGSGDEIVRGQLEFKTATDGLH 241 EAA GV VRPGELVPLARHALAVPLH+PLTIELD+ GGSGDEIVRG+LEFKTA DGLH Sbjct: 480 EAA--GVRVRPGELVPLARHALAVPLHMPLTIELDIRHGGSGDEIVRGELEFKTAIDGLH 537 Query: 240 VERLVGVNGAEFEVTILWSEYPW 172 RLVGVN AEFEVTILWSEYPW Sbjct: 538 TGRLVGVNDAEFEVTILWSEYPW 560
>YVBV_BACSU (O32256) Hypothetical transport protein yvbV| Length = 305 Score = 31.2 bits (69), Expect = 2.4 Identities = 19/45 (42%), Positives = 27/45 (60%) Frame = -2 Query: 239 WNVLLVSMVLNSR*QSYGRNTLGRHLCEPSGVLSAIVYIQILLYG 105 W + LVS +LN YG T+G + P+G+ SAIV+ Q +L G Sbjct: 68 WPIYLVSALLNIT-LFYGLQTIGLNYL-PAGLFSAIVFFQPVLMG 110
>WSC4_YEAST (P38739) Cell wall integrity and stress response component 4| precursor Length = 605 Score = 31.2 bits (69), Expect = 2.4 Identities = 28/112 (25%), Positives = 43/112 (38%), Gaps = 1/112 (0%) Frame = +2 Query: 197 VTSNSAPLTPTRRSTCRPSVAVLNSSWPLTIXXXXXXXXXXXXIVSGMCNGTASACLANG 376 +TS T T+ ST P+ ++S + S + T+S ++ Sbjct: 175 ITSALPTTTSTKLSTSIPTSTTSSTSTTTSTSSSTSTTVSVTSSTSTTTSTTSSTLISTS 234 Query: 377 TSSPGRTCTPLSAASL*KSTQPTSN-SLLRATILPTXXXXXXXXXXXXFTST 529 TSS + TP + +S ST TS+ S +T PT TST Sbjct: 235 TSS-SSSSTPTTTSSAPISTSTTSSTSTSTSTTSPTSSSAPTSSSNTTPTST 285
>HLYA_PROMI (P16466) Hemolysin precursor| Length = 1577 Score = 30.8 bits (68), Expect = 3.1 Identities = 32/123 (26%), Positives = 47/123 (38%), Gaps = 5/123 (4%) Frame = +1 Query: 211 STIDTNKTFHMQAVGGSFELKLASNNFISGSTTMKVKLNRQRYVQWHGECMPRQRNQLPR 390 S ID + A G L A I+ + + N+ ++ E R N R Sbjct: 392 SQIDAKNNATLTATKGDVTLDAAK---INAGNNLAINANKDIHINGLVEKESRSENGNKR 448 Query: 391 SHVHSLVSGLLVEEHATDVEQLAASNDPANKILFVSG-----LQARKLHIDPALDAIAQD 555 +H L SG H T E L AS A K L + Q KLH + + A+D Sbjct: 449 NHTSRLESGSWSNSHQT--ETLKASELTAGKDLGLDAQGSITAQGAKLHANENVLVNAKD 506 Query: 556 SVD 564 +++ Sbjct: 507 NIN 509
>YM96_YEAST (Q04893) Hypothetical 113.1 kDa protein in PRE5-FET4 intergenic| region Length = 1140 Score = 30.8 bits (68), Expect = 3.1 Identities = 23/132 (17%), Positives = 56/132 (42%), Gaps = 2/132 (1%) Frame = +2 Query: 191 KIVTSNSAPLTPTRRSTCRPSVAVLNSSWPLTIXXXXXXXXXXXXIVSGMCNGTASACLA 370 ++ +S+++ ++ ST P+ + ++ + P + + + S+ + Sbjct: 218 EVFSSSTSDVSSLLSSTSSPASSTISETLPFSSTILSITSSPVSSEAPSATSSSVSSEAS 277 Query: 371 NGTSSPGRTCTPLSAASL*KSTQPTSNSLLRATILPTXXXXXXXXXXXXFTST--RPWTP 544 + TSS + PL+ +S+ S P+S S + ++ P+ TS+ P Sbjct: 278 SSTSSSVSSEAPLATSSVVSSEAPSSTSSVVSSEAPSSTSSSVSSEISSTTSSSVSSEAP 337 Query: 545 LLRTA*ITSAGP 580 L ++ ++S P Sbjct: 338 LATSSVVSSEAP 349
>Y746_METJA (Q58156) Hypothetical protein MJ0746| Length = 141 Score = 30.8 bits (68), Expect = 3.1 Identities = 18/57 (31%), Positives = 29/57 (50%) Frame = +1 Query: 409 VSGLLVEEHATDVEQLAASNDPANKILFVSGLQARKLHIDPALDAIAQDSVDHLRWA 579 ++GL+ E ++E + ANK + +A++L IDPA D + S D R A Sbjct: 73 MNGLISENLKENIEMMLKGECMANKEKKAAATKAKELGIDPAHDFFDESSRDEARHA 129
>SDC_DROME (P49415) Syndecan precursor| Length = 399 Score = 30.8 bits (68), Expect = 3.1 Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 3/48 (6%) Frame = -1 Query: 426 YKEAADKGVHV---RPGELVPLARHALAVPLHIPLTIELDLHRGGSGD 292 Y + DK + + PG L P+ H HIP T E+D+ G D Sbjct: 217 YNKELDKEIDIDGPEPGHLPPVVHHNTVETGHIPTTDEIDVDGGDEDD 264
>TYPA_SYNY3 (P72749) GTP-binding protein TypA/BipA homolog| Length = 597 Score = 30.4 bits (67), Expect = 4.1 Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 9/95 (9%) Frame = -1 Query: 450 FDVGCVLFY--KEAADKGVH-------VRPGELVPLARHALAVPLHIPLTIELDLHRGGS 298 F+ G FY K A D+GV V G ++ + L++ T +L HR + Sbjct: 490 FEEGVATFYAMKNAEDRGVFFITPGTKVYKGMIIGEHNRPQDIELNVCKTKQLTNHRSAT 549 Query: 297 GDEIVRGQLEFKTATDGLHVERLVGVNGAEFEVTI 193 GDE+V+ Q A + +++ER + G + V I Sbjct: 550 GDELVQLQ-----APEDMNLERALEYIGPDELVEI 579
>UUP_BUCAI (P57445) ABC transporter ATP-binding protein uup| Length = 596 Score = 30.4 bits (67), Expect = 4.1 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = +1 Query: 199 HLEFSTIDTNKTFHMQAVGGSFELKLASNNFISGSTTMKVKLNRQRYVQWHGE 357 HL+ TI +TF ++ GS NFI +T + L+R + V W G+ Sbjct: 155 HLDMKTIKWLETF-LKKFSGSILFVSHDRNFIQNVSTRIIDLDRGKLVSWPGD 206
>AROA_LACLA (Q9CEU0) 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19)| (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS) Length = 430 Score = 30.0 bits (66), Expect = 5.3 Identities = 15/49 (30%), Positives = 30/49 (61%) Frame = +1 Query: 241 MQAVGGSFELKLASNNFISGSTTMKVKLNRQRYVQWHGECMPRQRNQLP 387 +QA+GG E+ N ++ + T+KVK ++ + + G+ +PR ++LP Sbjct: 269 IQAMGGQLEILEQDN--VAKAATLKVKASQLKGTEISGDLIPRLIDELP 315
>AROA_LACLC (P43905) 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19)| (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS) Length = 430 Score = 29.6 bits (65), Expect = 6.9 Identities = 14/49 (28%), Positives = 32/49 (65%) Frame = +1 Query: 241 MQAVGGSFELKLASNNFISGSTTMKVKLNRQRYVQWHGECMPRQRNQLP 387 +QA+GG +L++ + ++ + T+KVK ++ + + G+ +PR ++LP Sbjct: 269 IQAMGG--QLEILEQDEVAKAATLKVKASQLKGTEISGDLIPRLIDELP 315
>WNK2_HUMAN (Q9Y3S1) Serine/threonine-protein kinase WNK2 (EC 2.7.11.1) (Protein| kinase with no lysine 2) (Protein kinase, lysine-deficient 2) Length = 2297 Score = 29.3 bits (64), Expect = 9.1 Identities = 14/36 (38%), Positives = 17/36 (47%) Frame = +3 Query: 465 QRSCQQDPLRLGTAGAQASHRPGLGRHCSGQRRSPP 572 + S + P +GT G QASH LG G R P Sbjct: 1735 ESSAEPPPSDMGTVGGQASHPQTLGARALGSPRKRP 1770 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 83,582,909 Number of Sequences: 219361 Number of extensions: 1697876 Number of successful extensions: 5093 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 4906 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5090 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5253413348 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)