ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal4f16 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_465111.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1377 Score = 404 bits (204), Expect = e-109 Identities = 314/350 (89%), Gaps = 3/350 (0%) Strand = Plus / Minus Query: 275 gtcgacgacgacctcggtcatgggcacgtggtcggcct---tgcgcttgcgggcctccag 331 |||||||||||| |||||||||| || |||||||||| |||||||||| ||||| | Sbjct: 930 gtcgacgacgacatcggtcatggcgacatggtcggcctccttgcgcttgcgcgcctcgat 871 Query: 332 gatctcctgcgtcgacttgtagtagatggcgtacagaattatctgccccactgcgaacat 391 ||||| |||||||||||||||||||||||||||||| || | |||| |||| |||||||| Sbjct: 870 gatctgctgcgtcgacttgtagtagatggcgtacaggatcagctgcgccaccgcgaacat 811 Query: 392 gacgcccagcccgttggggatggtgatgtagaggtcgaagtggatgagggcgtaggcagt 451 || ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| Sbjct: 810 cactcccagcccgttggggatcgtgatgtagaggtcgaagcggatgagggcgtaggcagt 751 Query: 452 ccagcagatgccattgacgagcgaggccacggacaggaacaggggcatgtactccacgct 511 |||||||||||| ||||| || || |||| ||||| ||| |||||||||||||||||||| Sbjct: 750 ccagcagatgccgttgaccagtgacgccagggacaagaaaaggggcatgtactccacgct 691 Query: 512 cttggtctggatcaccattttcatgacggagagcggcgcggcgtacatgccggtgccgaa 571 ||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 690 cttagtctggatcaccattttcatgacggagaggggggcggcgtacatgccggtgccgaa 631 Query: 572 gaggacgcagaggatgccgacgaccatggacctgcggtcgtgggtgtggg 621 ||||||||||||||| ||||||| |||||| | || ||||||||||||| Sbjct: 630 gaggacgcagaggataccgacgatcatggagcgtcgctcgtgggtgtggg 581
>ref|XM_507468.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0010K08.10 mRNA Length = 1383 Score = 404 bits (204), Expect = e-109 Identities = 314/350 (89%), Gaps = 3/350 (0%) Strand = Plus / Minus Query: 275 gtcgacgacgacctcggtcatgggcacgtggtcggcct---tgcgcttgcgggcctccag 331 |||||||||||| |||||||||| || |||||||||| |||||||||| ||||| | Sbjct: 930 gtcgacgacgacatcggtcatggcgacatggtcggcctccttgcgcttgcgcgcctcgat 871 Query: 332 gatctcctgcgtcgacttgtagtagatggcgtacagaattatctgccccactgcgaacat 391 ||||| |||||||||||||||||||||||||||||| || | |||| |||| |||||||| Sbjct: 870 gatctgctgcgtcgacttgtagtagatggcgtacaggatcagctgcgccaccgcgaacat 811 Query: 392 gacgcccagcccgttggggatggtgatgtagaggtcgaagtggatgagggcgtaggcagt 451 || ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| Sbjct: 810 cactcccagcccgttggggatcgtgatgtagaggtcgaagcggatgagggcgtaggcagt 751 Query: 452 ccagcagatgccattgacgagcgaggccacggacaggaacaggggcatgtactccacgct 511 |||||||||||| ||||| || || |||| ||||| ||| |||||||||||||||||||| Sbjct: 750 ccagcagatgccgttgaccagtgacgccagggacaagaaaaggggcatgtactccacgct 691 Query: 512 cttggtctggatcaccattttcatgacggagagcggcgcggcgtacatgccggtgccgaa 571 ||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 690 cttagtctggatcaccattttcatgacggagaggggggcggcgtacatgccggtgccgaa 631 Query: 572 gaggacgcagaggatgccgacgaccatggacctgcggtcgtgggtgtggg 621 ||||||||||||||| ||||||| |||||| | || ||||||||||||| Sbjct: 630 gaggacgcagaggataccgacgatcatggagcgtcgctcgtgggtgtggg 581
>ref|XM_507467.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0010K08.10 mRNA Length = 1384 Score = 404 bits (204), Expect = e-109 Identities = 314/350 (89%), Gaps = 3/350 (0%) Strand = Plus / Minus Query: 275 gtcgacgacgacctcggtcatgggcacgtggtcggcct---tgcgcttgcgggcctccag 331 |||||||||||| |||||||||| || |||||||||| |||||||||| ||||| | Sbjct: 931 gtcgacgacgacatcggtcatggcgacatggtcggcctccttgcgcttgcgcgcctcgat 872 Query: 332 gatctcctgcgtcgacttgtagtagatggcgtacagaattatctgccccactgcgaacat 391 ||||| |||||||||||||||||||||||||||||| || | |||| |||| |||||||| Sbjct: 871 gatctgctgcgtcgacttgtagtagatggcgtacaggatcagctgcgccaccgcgaacat 812 Query: 392 gacgcccagcccgttggggatggtgatgtagaggtcgaagtggatgagggcgtaggcagt 451 || ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| Sbjct: 811 cactcccagcccgttggggatcgtgatgtagaggtcgaagcggatgagggcgtaggcagt 752 Query: 452 ccagcagatgccattgacgagcgaggccacggacaggaacaggggcatgtactccacgct 511 |||||||||||| ||||| || || |||| ||||| ||| |||||||||||||||||||| Sbjct: 751 ccagcagatgccgttgaccagtgacgccagggacaagaaaaggggcatgtactccacgct 692 Query: 512 cttggtctggatcaccattttcatgacggagagcggcgcggcgtacatgccggtgccgaa 571 ||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 691 cttagtctggatcaccattttcatgacggagaggggggcggcgtacatgccggtgccgaa 632 Query: 572 gaggacgcagaggatgccgacgaccatggacctgcggtcgtgggtgtggg 621 ||||||||||||||| ||||||| |||||| | || ||||||||||||| Sbjct: 631 gaggacgcagaggataccgacgatcatggagcgtcgctcgtgggtgtggg 582
>ref|XM_506777.2| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0010K08.10 mRNA Length = 1485 Score = 404 bits (204), Expect = e-109 Identities = 314/350 (89%), Gaps = 3/350 (0%) Strand = Plus / Minus Query: 275 gtcgacgacgacctcggtcatgggcacgtggtcggcct---tgcgcttgcgggcctccag 331 |||||||||||| |||||||||| || |||||||||| |||||||||| ||||| | Sbjct: 927 gtcgacgacgacatcggtcatggcgacatggtcggcctccttgcgcttgcgcgcctcgat 868 Query: 332 gatctcctgcgtcgacttgtagtagatggcgtacagaattatctgccccactgcgaacat 391 ||||| |||||||||||||||||||||||||||||| || | |||| |||| |||||||| Sbjct: 867 gatctgctgcgtcgacttgtagtagatggcgtacaggatcagctgcgccaccgcgaacat 808 Query: 392 gacgcccagcccgttggggatggtgatgtagaggtcgaagtggatgagggcgtaggcagt 451 || ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| Sbjct: 807 cactcccagcccgttggggatcgtgatgtagaggtcgaagcggatgagggcgtaggcagt 748 Query: 452 ccagcagatgccattgacgagcgaggccacggacaggaacaggggcatgtactccacgct 511 |||||||||||| ||||| || || |||| ||||| ||| |||||||||||||||||||| Sbjct: 747 ccagcagatgccgttgaccagtgacgccagggacaagaaaaggggcatgtactccacgct 688 Query: 512 cttggtctggatcaccattttcatgacggagagcggcgcggcgtacatgccggtgccgaa 571 ||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 687 cttagtctggatcaccattttcatgacggagaggggggcggcgtacatgccggtgccgaa 628 Query: 572 gaggacgcagaggatgccgacgaccatggacctgcggtcgtgggtgtggg 621 ||||||||||||||| ||||||| |||||| | || ||||||||||||| Sbjct: 627 gaggacgcagaggataccgacgatcatggagcgtcgctcgtgggtgtggg 578
>dbj|AK104467.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C10, full insert sequence Length = 1383 Score = 404 bits (204), Expect = e-109 Identities = 314/350 (89%), Gaps = 3/350 (0%) Strand = Plus / Minus Query: 275 gtcgacgacgacctcggtcatgggcacgtggtcggcct---tgcgcttgcgggcctccag 331 |||||||||||| |||||||||| || |||||||||| |||||||||| ||||| | Sbjct: 930 gtcgacgacgacatcggtcatggcgacatggtcggcctccttgcgcttgcgcgcctcgat 871 Query: 332 gatctcctgcgtcgacttgtagtagatggcgtacagaattatctgccccactgcgaacat 391 ||||| |||||||||||||||||||||||||||||| || | |||| |||| |||||||| Sbjct: 870 gatctgctgcgtcgacttgtagtagatggcgtacaggatcagctgcgccaccgcgaacat 811 Query: 392 gacgcccagcccgttggggatggtgatgtagaggtcgaagtggatgagggcgtaggcagt 451 || ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| Sbjct: 810 cactcccagcccgttggggatcgtgatgtagaggtcgaagcggatgagggcgtaggcagt 751 Query: 452 ccagcagatgccattgacgagcgaggccacggacaggaacaggggcatgtactccacgct 511 |||||||||||| ||||| || || |||| ||||| ||| |||||||||||||||||||| Sbjct: 750 ccagcagatgccgttgaccagtgacgccagggacaagaaaaggggcatgtactccacgct 691 Query: 512 cttggtctggatcaccattttcatgacggagagcggcgcggcgtacatgccggtgccgaa 571 ||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 690 cttagtctggatcaccattttcatgacggagaggggggcggcgtacatgccggtgccgaa 631 Query: 572 gaggacgcagaggatgccgacgaccatggacctgcggtcgtgggtgtggg 621 ||||||||||||||| ||||||| |||||| | || ||||||||||||| Sbjct: 630 gaggacgcagaggataccgacgatcatggagcgtcgctcgtgggtgtggg 581
>dbj|AK104411.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-G12, full insert sequence Length = 1377 Score = 404 bits (204), Expect = e-109 Identities = 314/350 (89%), Gaps = 3/350 (0%) Strand = Plus / Minus Query: 275 gtcgacgacgacctcggtcatgggcacgtggtcggcct---tgcgcttgcgggcctccag 331 |||||||||||| |||||||||| || |||||||||| |||||||||| ||||| | Sbjct: 930 gtcgacgacgacatcggtcatggcgacatggtcggcctccttgcgcttgcgcgcctcgat 871 Query: 332 gatctcctgcgtcgacttgtagtagatggcgtacagaattatctgccccactgcgaacat 391 ||||| |||||||||||||||||||||||||||||| || | |||| |||| |||||||| Sbjct: 870 gatctgctgcgtcgacttgtagtagatggcgtacaggatcagctgcgccaccgcgaacat 811 Query: 392 gacgcccagcccgttggggatggtgatgtagaggtcgaagtggatgagggcgtaggcagt 451 || ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| Sbjct: 810 cactcccagcccgttggggatcgtgatgtagaggtcgaagcggatgagggcgtaggcagt 751 Query: 452 ccagcagatgccattgacgagcgaggccacggacaggaacaggggcatgtactccacgct 511 |||||||||||| ||||| || || |||| ||||| ||| |||||||||||||||||||| Sbjct: 750 ccagcagatgccgttgaccagtgacgccagggacaagaaaaggggcatgtactccacgct 691 Query: 512 cttggtctggatcaccattttcatgacggagagcggcgcggcgtacatgccggtgccgaa 571 ||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 690 cttagtctggatcaccattttcatgacggagaggggggcggcgtacatgccggtgccgaa 631 Query: 572 gaggacgcagaggatgccgacgaccatggacctgcggtcgtgggtgtggg 621 ||||||||||||||| ||||||| |||||| | || ||||||||||||| Sbjct: 630 gaggacgcagaggataccgacgatcatggagcgtcgctcgtgggtgtggg 581
>dbj|AK100174.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023027A16, full insert sequence Length = 1484 Score = 404 bits (204), Expect = e-109 Identities = 314/350 (89%), Gaps = 3/350 (0%) Strand = Plus / Minus Query: 275 gtcgacgacgacctcggtcatgggcacgtggtcggcct---tgcgcttgcgggcctccag 331 |||||||||||| |||||||||| || |||||||||| |||||||||| ||||| | Sbjct: 926 gtcgacgacgacatcggtcatggcgacatggtcggcctccttgcgcttgcgcgcctcgat 867 Query: 332 gatctcctgcgtcgacttgtagtagatggcgtacagaattatctgccccactgcgaacat 391 ||||| |||||||||||||||||||||||||||||| || | |||| |||| |||||||| Sbjct: 866 gatctgctgcgtcgacttgtagtagatggcgtacaggatcagctgcgccaccgcgaacat 807 Query: 392 gacgcccagcccgttggggatggtgatgtagaggtcgaagtggatgagggcgtaggcagt 451 || ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| Sbjct: 806 cactcccagcccgttggggatcgtgatgtagaggtcgaagcggatgagggcgtaggcagt 747 Query: 452 ccagcagatgccattgacgagcgaggccacggacaggaacaggggcatgtactccacgct 511 |||||||||||| ||||| || || |||| ||||| ||| |||||||||||||||||||| Sbjct: 746 ccagcagatgccgttgaccagtgacgccagggacaagaaaaggggcatgtactccacgct 687 Query: 512 cttggtctggatcaccattttcatgacggagagcggcgcggcgtacatgccggtgccgaa 571 ||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 686 cttagtctggatcaccattttcatgacggagaggggggcggcgtacatgccggtgccgaa 627 Query: 572 gaggacgcagaggatgccgacgaccatggacctgcggtcgtgggtgtggg 621 ||||||||||||||| ||||||| |||||| | || ||||||||||||| Sbjct: 626 gaggacgcagaggataccgacgatcatggagcgtcgctcgtgggtgtggg 577
>dbj|AK071676.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023108F17, full insert sequence Length = 1384 Score = 404 bits (204), Expect = e-109 Identities = 314/350 (89%), Gaps = 3/350 (0%) Strand = Plus / Minus Query: 275 gtcgacgacgacctcggtcatgggcacgtggtcggcct---tgcgcttgcgggcctccag 331 |||||||||||| |||||||||| || |||||||||| |||||||||| ||||| | Sbjct: 931 gtcgacgacgacatcggtcatggcgacatggtcggcctccttgcgcttgcgcgcctcgat 872 Query: 332 gatctcctgcgtcgacttgtagtagatggcgtacagaattatctgccccactgcgaacat 391 ||||| |||||||||||||||||||||||||||||| || | |||| |||| |||||||| Sbjct: 871 gatctgctgcgtcgacttgtagtagatggcgtacaggatcagctgcgccaccgcgaacat 812 Query: 392 gacgcccagcccgttggggatggtgatgtagaggtcgaagtggatgagggcgtaggcagt 451 || ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| Sbjct: 811 cactcccagcccgttggggatcgtgatgtagaggtcgaagcggatgagggcgtaggcagt 752 Query: 452 ccagcagatgccattgacgagcgaggccacggacaggaacaggggcatgtactccacgct 511 |||||||||||| ||||| || || |||| ||||| ||| |||||||||||||||||||| Sbjct: 751 ccagcagatgccgttgaccagtgacgccagggacaagaaaaggggcatgtactccacgct 692 Query: 512 cttggtctggatcaccattttcatgacggagagcggcgcggcgtacatgccggtgccgaa 571 ||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 691 cttagtctggatcaccattttcatgacggagaggggggcggcgtacatgccggtgccgaa 632 Query: 572 gaggacgcagaggatgccgacgaccatggacctgcggtcgtgggtgtggg 621 ||||||||||||||| ||||||| |||||| | || ||||||||||||| Sbjct: 631 gaggacgcagaggataccgacgatcatggagcgtcgctcgtgggtgtggg 582
>gb|AY110564.1| Zea mays CL2950_2 mRNA sequence Length = 602 Score = 226 bits (114), Expect = 7e-56 Identities = 219/254 (86%) Strand = Plus / Plus Query: 271 tgccgtcgacgacgacctcggtcatgggcacgtggtcggccttgcgcttgcgggcctcca 330 ||||||||||||| ||||| ||||||| || ||| | |||||||||||||| ||||||| Sbjct: 316 tgccgtcgacgaccacctccgtcatggcgacctggcccgccttgcgcttgcgtgcctcca 375 Query: 331 ggatctcctgcgtcgacttgtagtagatggcgtacagaattatctgccccactgcgaaca 390 ||||| ||| || ||||||||||||||||||||| | | |||| ||| ||||||| Sbjct: 376 cgatcttctgggtgttcttgtagtagatggcgtacaggagcagctgcgccagcgcgaaca 435 Query: 391 tgacgcccagcccgttggggatggtgatgtagaggtcgaagtggatgagggcgtaggcag 450 ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| | Sbjct: 436 gcacgcccagcccgttggggatggtgatgtagaggtcgaagcggatgagcgcgtaggcgg 495 Query: 451 tccagcagatgccattgacgagcgaggccacggacaggaacaggggcatgtactccacgc 510 ||||||||||||| || || || || |||| ||||||||||| |||||||||||||||| Sbjct: 496 tccagcagatgccgttcaccagggaagccagtgacaggaacagcggcatgtactccacgc 555 Query: 511 tcttggtctggatc 524 |||| ||||||||| Sbjct: 556 tcttcgtctggatc 569
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 167 bits (84), Expect = 5e-38 Identities = 111/120 (92%) Strand = Plus / Plus Query: 414 gtgatgtagaggtcgaagtggatgagggcgtaggcagtccagcagatgccattgacgagc 473 |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| || Sbjct: 11593389 gtgatgtagaggtcgaagcggatgagggcgtaggcagtccagcagatgccgttgaccagt 11593448 Query: 474 gaggccacggacaggaacaggggcatgtactccacgctcttggtctggatcaccattttc 533 || |||| ||||| ||| ||||||||||||||||||||||| |||||||||||||||||| Sbjct: 11593449 gacgccagggacaagaaaaggggcatgtactccacgctcttagtctggatcaccattttc 11593508 Score = 133 bits (67), Expect = 8e-28 Identities = 123/141 (87%), Gaps = 3/141 (2%) Strand = Plus / Plus Query: 275 gtcgacgacgacctcggtcatgggcacgtggtcggcct---tgcgcttgcgggcctccag 331 |||||||||||| |||||||||| || |||||||||| |||||||||| ||||| | Sbjct: 11591914 gtcgacgacgacatcggtcatggcgacatggtcggcctccttgcgcttgcgcgcctcgat 11591973 Query: 332 gatctcctgcgtcgacttgtagtagatggcgtacagaattatctgccccactgcgaacat 391 ||||| |||||||||||||||||||||||||||||| || | |||| |||| |||||||| Sbjct: 11591974 gatctgctgcgtcgacttgtagtagatggcgtacaggatcagctgcgccaccgcgaacat 11592033 Query: 392 gacgcccagcccgttggggat 412 || ||||||||||||||||| Sbjct: 11592034 cactcccagcccgttggggat 11592054 Score = 113 bits (57), Expect = 7e-22 Identities = 81/89 (91%) Strand = Plus / Plus Query: 533 catgacggagagcggcgcggcgtacatgccggtgccgaagaggacgcagaggatgccgac 592 |||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 11594205 catgacggagaggggggcggcgtacatgccggtgccgaagaggacgcagaggataccgac 11594264 Query: 593 gaccatggacctgcggtcgtgggtgtggg 621 || |||||| | || ||||||||||||| Sbjct: 11594265 gatcatggagcgtcgctcgtgggtgtggg 11594293 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 495 ggcatgtactccacgctcttggtctggatcacca 528 |||||| ||||||||||||||||| ||||||||| Sbjct: 18555053 ggcatgaactccacgctcttggtccggatcacca 18555086
>dbj|AP005532.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0010K08 Length = 184760 Score = 167 bits (84), Expect = 5e-38 Identities = 111/120 (92%) Strand = Plus / Plus Query: 414 gtgatgtagaggtcgaagtggatgagggcgtaggcagtccagcagatgccattgacgagc 473 |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| || Sbjct: 39678 gtgatgtagaggtcgaagcggatgagggcgtaggcagtccagcagatgccgttgaccagt 39737 Query: 474 gaggccacggacaggaacaggggcatgtactccacgctcttggtctggatcaccattttc 533 || |||| ||||| ||| ||||||||||||||||||||||| |||||||||||||||||| Sbjct: 39738 gacgccagggacaagaaaaggggcatgtactccacgctcttagtctggatcaccattttc 39797 Score = 133 bits (67), Expect = 8e-28 Identities = 123/141 (87%), Gaps = 3/141 (2%) Strand = Plus / Plus Query: 275 gtcgacgacgacctcggtcatgggcacgtggtcggcct---tgcgcttgcgggcctccag 331 |||||||||||| |||||||||| || |||||||||| |||||||||| ||||| | Sbjct: 38203 gtcgacgacgacatcggtcatggcgacatggtcggcctccttgcgcttgcgcgcctcgat 38262 Query: 332 gatctcctgcgtcgacttgtagtagatggcgtacagaattatctgccccactgcgaacat 391 ||||| |||||||||||||||||||||||||||||| || | |||| |||| |||||||| Sbjct: 38263 gatctgctgcgtcgacttgtagtagatggcgtacaggatcagctgcgccaccgcgaacat 38322 Query: 392 gacgcccagcccgttggggat 412 || ||||||||||||||||| Sbjct: 38323 cactcccagcccgttggggat 38343 Score = 113 bits (57), Expect = 7e-22 Identities = 81/89 (91%) Strand = Plus / Plus Query: 533 catgacggagagcggcgcggcgtacatgccggtgccgaagaggacgcagaggatgccgac 592 |||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 40494 catgacggagaggggggcggcgtacatgccggtgccgaagaggacgcagaggataccgac 40553 Query: 593 gaccatggacctgcggtcgtgggtgtggg 621 || |||||| | || ||||||||||||| Sbjct: 40554 gatcatggagcgtcgctcgtgggtgtggg 40582
>gb|AY104514.1| Zea mays PCO071788 mRNA sequence Length = 616 Score = 167 bits (84), Expect = 5e-38 Identities = 117/128 (91%) Strand = Plus / Minus Query: 492 aggggcatgtactccacgctcttggtctggatcaccattttcatgacggagagcggcgcg 551 ||||||||||| ||||||||||| ||||||||||||| ||||||||| ||||||||||| Sbjct: 616 aggggcatgtattccacgctctttgtctggatcaccaatttcatgaccgagagcggcgca 557 Query: 552 gcgtacatgccggtgccgaagaggacgcagaggatgccgacgaccatggacctgcggtcg 611 |||||||||||||||||||||| |||| ||| ||||||||||| |||||||||||| ||| Sbjct: 556 gcgtacatgccggtgccgaagaagacggagacgatgccgacgagcatggacctgcgctcg 497 Query: 612 tgggtgtg 619 || ||||| Sbjct: 496 tgcgtgtg 489
>ref|XM_475994.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 714 Score = 97.6 bits (49), Expect = 4e-17 Identities = 88/101 (87%) Strand = Plus / Minus Query: 494 gggcatgtactccacgctcttggtctggatcaccattttcatgacggagagcggcgcggc 553 ||||||||||||||||||||| ||| |||||| |||||||| || |||||||||||| Sbjct: 501 gggcatgtactccacgctctttgtcgcgatcacttgtttcatgatggtgagcggcgcggc 442 Query: 554 gtacatgccggtgccgaagaggacgcagaggatgccgacga 594 ||||||| ||||||||||| |||||||||| |||| |||| Sbjct: 441 gtacatgagggtgccgaagaagacgcagagggtgccaacga 401
>dbj|AK069614.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023023E05, full insert sequence Length = 1363 Score = 97.6 bits (49), Expect = 4e-17 Identities = 88/101 (87%) Strand = Plus / Minus Query: 494 gggcatgtactccacgctcttggtctggatcaccattttcatgacggagagcggcgcggc 553 ||||||||||||||||||||| ||| |||||| |||||||| || |||||||||||| Sbjct: 837 gggcatgtactccacgctctttgtcgcgatcacttgtttcatgatggtgagcggcgcggc 778 Query: 554 gtacatgccggtgccgaagaggacgcagaggatgccgacga 594 ||||||| ||||||||||| |||||||||| |||| |||| Sbjct: 777 gtacatgagggtgccgaagaagacgcagagggtgccaacga 737
>ref|NM_192685.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 765 Score = 71.9 bits (36), Expect = 2e-09 Identities = 159/200 (79%) Strand = Plus / Minus Query: 402 ccgttggggatggtgatgtagaggtcgaagtggatgagggcgtaggcagtccagcagatg 461 |||||||||||||| | |||| ||||||| ||||||| |||||||| |||||||| | | Sbjct: 590 ccgttggggatggtcacatagatgtcgaagcggatgagcgcgtaggccgtccagcaaacg 531 Query: 462 ccattgacgagcgaggccacggacaggaacaggggcatgtactccacgctcttggtctgg 521 || |||| || | ||| |||||||| | ||||||||||| |||||||| |||| Sbjct: 530 ccgttgaggaagcacaccagcgacaggaagaacggcatgtactctacgctcttcgtcttt 471 Query: 522 atcaccattttcatgacggagagcggcgcggcgtacatgccggtgccgaagaggacgcag 581 ||||| | ||||| || |||||| | | ||||||| || |||||||| ||||||| Sbjct: 470 atcactttccccatgatggtgagcggggagaagtacatgatggagccgaagaagacgcag 411 Query: 582 aggatgccgacgaccatgga 601 ||||||||||||| |||||| Sbjct: 410 aggatgccgacgatcatgga 391
>dbj|AK099440.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013020J10, full insert sequence Length = 992 Score = 71.9 bits (36), Expect = 2e-09 Identities = 159/200 (79%) Strand = Plus / Minus Query: 402 ccgttggggatggtgatgtagaggtcgaagtggatgagggcgtaggcagtccagcagatg 461 |||||||||||||| | |||| ||||||| ||||||| |||||||| |||||||| | | Sbjct: 656 ccgttggggatggtcacatagatgtcgaagcggatgagcgcgtaggccgtccagcaaacg 597 Query: 462 ccattgacgagcgaggccacggacaggaacaggggcatgtactccacgctcttggtctgg 521 || |||| || | ||| |||||||| | ||||||||||| |||||||| |||| Sbjct: 596 ccgttgaggaagcacaccagcgacaggaagaacggcatgtactctacgctcttcgtcttt 537 Query: 522 atcaccattttcatgacggagagcggcgcggcgtacatgccggtgccgaagaggacgcag 581 ||||| | ||||| || |||||| | | ||||||| || |||||||| ||||||| Sbjct: 536 atcactttccccatgatggtgagcggggagaagtacatgatggagccgaagaagacgcag 477 Query: 582 aggatgccgacgaccatgga 601 ||||||||||||| |||||| Sbjct: 476 aggatgccgacgatcatgga 457
>gb|AY105503.1| Zea mays PCO075069 mRNA sequence Length = 549 Score = 71.9 bits (36), Expect = 2e-09 Identities = 165/208 (79%) Strand = Plus / Minus Query: 394 cgcccagcccgttggggatggtgatgtagaggtcgaagtggatgagggcgtaggcagtcc 453 ||||||| |||| ||||| |||| ||||||||||||| ||||||| |||||||| |||| Sbjct: 408 cgcccagggcgttcgggatcgtgacgtagaggtcgaagcggatgagcgcgtaggccgtcc 349 Query: 454 agcagatgccattgacgagcgaggccacggacaggaacaggggcatgtactccacgctct 513 ||||| ||| |||| || ||| ||||||| | |||||||||||| ||||||| Sbjct: 348 agcagcagccgttgaggaagctcaccagcgacaggaggaagggcatgtactcaacgctct 289 Query: 514 tggtctggatcaccattttcatgacggagagcggcgcggcgtacatgccggtgccgaaga 573 |||||| |||||| |||||| | ||| || | ||||||||| | ||||||| Sbjct: 288 tggtcttgatcactcgactcatgatagtgagtggtgaggcgtacatcatcgagccgaagc 229 Query: 574 ggacgcagaggatgccgacgaccatgga 601 ||||||||||||||||||||| |||||| Sbjct: 228 ggacgcagaggatgccgacgatcatgga 201
>dbj|D21813.1|LILLIM07 Lilium longiflorum LIM7 mRNA, partial cds, clone:plim7 Length = 1010 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 486 aggaacaggggcatgtactccacgctcttggtctggatcaccattttcatgacgga 541 ||||| |||||||||||||| ||||| ||||| |||||||||| |||||||||||| Sbjct: 392 aggaagaggggcatgtactcaacgcttttggtttggatcaccaatttcatgacgga 337
>gb|AY106071.1| Zea mays PCO141993 mRNA sequence Length = 1300 Score = 69.9 bits (35), Expect = 9e-09 Identities = 59/67 (88%) Strand = Plus / Minus Query: 495 ggcatgtactccacgctcttggtctggatcaccattttcatgacggagagcggcgcggcg 554 |||||| ||||||||||||| |||| |||||||| |||||| ||||||||||| |||| Sbjct: 732 ggcatgaactccacgctcttcgtcttgatcaccagcctcatgatggagagcggcgaggcg 673 Query: 555 tacatgc 561 ||||||| Sbjct: 672 tacatgc 666
>gb|AC098598.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1007_H05, complete sequence Length = 108479 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 533 catgacggagagcggcgcggcgtacatgccggtgccgaagaggacgcagaggatgccgac 592 ||||| || ||||||||||||||||||| ||||||||||| |||||||||| |||| || Sbjct: 103625 catgatggtgagcggcgcggcgtacatgagggtgccgaagaagacgcagagggtgccaac 103684 Query: 593 ga 594 || Sbjct: 103685 ga 103686 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 494 gggcatgtactccacgctctt 514 ||||||||||||||||||||| Sbjct: 103468 gggcatgtactccacgctctt 103488
>gb|AC105260.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1115_D04, complete sequence Length = 100800 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 533 catgacggagagcggcgcggcgtacatgccggtgccgaagaggacgcagaggatgccgac 592 ||||| || ||||||||||||||||||| ||||||||||| |||||||||| |||| || Sbjct: 19794 catgatggtgagcggcgcggcgtacatgagggtgccgaagaagacgcagagggtgccaac 19853 Query: 593 ga 594 || Sbjct: 19854 ga 19855 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 494 gggcatgtactccacgctctt 514 ||||||||||||||||||||| Sbjct: 19637 gggcatgtactccacgctctt 19657
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 533 catgacggagagcggcgcggcgtacatgccggtgccgaagaggacgcagaggatgccgac 592 ||||| || ||||||||||||||||||| ||||||||||| |||||||||| |||| || Sbjct: 29093570 catgatggtgagcggcgcggcgtacatgagggtgccgaagaagacgcagagggtgccaac 29093629 Query: 593 ga 594 || Sbjct: 29093630 ga 29093631 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 495 ggcatgtactccacgctcttggtctggatcacca 528 |||||||||||||||||||| |||| |||||||| Sbjct: 20728899 ggcatgtactccacgctcttcgtcttgatcacca 20728866 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 265 cgctcttgccgtcgacgacgac 286 |||||||||||||||||||||| Sbjct: 21977760 cgctcttgccgtcgacgacgac 21977781 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 494 gggcatgtactccacgctctt 514 ||||||||||||||||||||| Sbjct: 29093413 gggcatgtactccacgctctt 29093433
>ref|NM_190168.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 822 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 495 ggcatgtactccacgctcttggtctggatcaccattttcatgacggagagcggcgcggcg 554 |||||| ||||||||||||| |||| |||||||| |||||| |||||| |||| |||| Sbjct: 488 ggcatgaactccacgctcttcgtcttgatcaccagcctcatgatggagagaggcgaggcg 429 Query: 555 tacatgc 561 ||||||| Sbjct: 428 tacatgc 422
>ref|NM_192689.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 780 Score = 61.9 bits (31), Expect = 2e-06 Identities = 94/115 (81%) Strand = Plus / Minus Query: 405 ttggggatggtgatgtagaggtcgaagtggatgagggcgtaggcagtccagcagatgcca 464 ||||||||||| | ||||| ||| ||| ||||||| |||||||| |||||||||| ||| Sbjct: 587 ttggggatggtcacgtagatgtcaaagcggatgagcgcgtaggccgtccagcagacgccg 528 Query: 465 ttgacgagcgaggccacggacaggaacaggggcatgtactccacgctcttggtct 519 |||| || | ||| |||||||| | |||||||||||||||||||| |||| Sbjct: 527 ttgaggaagcacaccagcgacaggaagaacggcatgtactccacgctcttcgtct 473 Score = 40.1 bits (20), Expect = 8.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 566 gccgaagaggacgcagaggatgccgacgaccatgga 601 |||||||| |||||||||||| ||||| | |||||| Sbjct: 426 gccgaagaagacgcagaggataccgacaatcatgga 391
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 61.9 bits (31), Expect = 2e-06 Identities = 94/115 (81%) Strand = Plus / Minus Query: 405 ttggggatggtgatgtagaggtcgaagtggatgagggcgtaggcagtccagcagatgcca 464 ||||||||||| | ||||| ||| ||| ||||||| |||||||| |||||||||| ||| Sbjct: 23876164 ttggggatggtcacgtagatgtcaaagcggatgagcgcgtaggccgtccagcagacgccg 23876105 Query: 465 ttgacgagcgaggccacggacaggaacaggggcatgtactccacgctcttggtct 519 |||| || | ||| |||||||| | |||||||||||||||||||| |||| Sbjct: 23876104 ttgaggaagcacaccagcgacaggaagaacggcatgtactccacgctcttcgtct 23876050 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 402 ccgttggggatggtgatgtagaggtcgaagtggatgagggcgtaggcagtccagca 457 |||||||||||||| | |||| ||||||| ||||||| |||||||| |||||||| Sbjct: 23862980 ccgttggggatggtcacatagatgtcgaagcggatgagcgcgtaggccgtccagca 23862925 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 566 gccgaagaggacgcagaggatgccgacgaccatgga 601 |||||||| |||||||||||||||||||| |||||| Sbjct: 23861516 gccgaagaagacgcagaggatgccgacgatcatgga 23861481 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 494 gggcatgtactccacgctcttggtctggatcacca 528 ||||||||||||||||||||| ||| |||||||| Sbjct: 19957435 gggcatgtactccacgctcttcgtcctgatcacca 19957401 Score = 44.1 bits (22), Expect = 0.54 Identities = 31/34 (91%) Strand = Plus / Minus Query: 495 ggcatgtactccacgctcttggtctggatcacca 528 |||||| ||||||||||||| |||| |||||||| Sbjct: 38249738 ggcatgaactccacgctcttcgtcttgatcacca 38249705 Score = 40.1 bits (20), Expect = 8.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 566 gccgaagaggacgcagaggatgccgacgaccatgga 601 |||||||| |||||||||||| ||||| | |||||| Sbjct: 23874387 gccgaagaagacgcagaggataccgacaatcatgga 23874352 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 gccgtcgacgacgacctcgg 291 |||||||||||||||||||| Sbjct: 5127203 gccgtcgacgacgacctcgg 5127222
>dbj|AP003303.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0704D04 Length = 147638 Score = 61.9 bits (31), Expect = 2e-06 Identities = 94/115 (81%) Strand = Plus / Minus Query: 405 ttggggatggtgatgtagaggtcgaagtggatgagggcgtaggcagtccagcagatgcca 464 ||||||||||| | ||||| ||| ||| ||||||| |||||||| |||||||||| ||| Sbjct: 22568 ttggggatggtcacgtagatgtcaaagcggatgagcgcgtaggccgtccagcagacgccg 22509 Query: 465 ttgacgagcgaggccacggacaggaacaggggcatgtactccacgctcttggtct 519 |||| || | ||| |||||||| | |||||||||||||||||||| |||| Sbjct: 22508 ttgaggaagcacaccagcgacaggaagaacggcatgtactccacgctcttcgtct 22454 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 402 ccgttggggatggtgatgtagaggtcgaagtggatgagggcgtaggcagtccagca 457 |||||||||||||| | |||| ||||||| ||||||| |||||||| |||||||| Sbjct: 9384 ccgttggggatggtcacatagatgtcgaagcggatgagcgcgtaggccgtccagca 9329 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 566 gccgaagaggacgcagaggatgccgacgaccatgga 601 |||||||| |||||||||||||||||||| |||||| Sbjct: 7920 gccgaagaagacgcagaggatgccgacgatcatgga 7885 Score = 40.1 bits (20), Expect = 8.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 566 gccgaagaggacgcagaggatgccgacgaccatgga 601 |||||||| |||||||||||| ||||| | |||||| Sbjct: 20791 gccgaagaagacgcagaggataccgacaatcatgga 20756
>dbj|AK099531.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013031J21, full insert sequence Length = 1161 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 495 ggcatgtactccacgctcttggtctggatcaccattttcatgacggagagcggcgcggcg 554 |||||| ||||||||||||| |||| |||||||| |||||| |||||| |||| |||| Sbjct: 632 ggcatgaactccacgctcttcgtcttgatcaccagcctcatgatggagagaggcgaggcg 573 Query: 555 tacatgc 561 ||||||| Sbjct: 572 tacatgc 566
>dbj|AK067960.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013123F10, full insert sequence Length = 1208 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 495 ggcatgtactccacgctcttggtctggatcaccattttcatgacggagagcggcgcggcg 554 |||||| ||||||||||||| |||| |||||||| |||||| |||||| |||| |||| Sbjct: 640 ggcatgaactccacgctcttcgtcttgatcaccagcctcatgatggagagaggcgaggcg 581 Query: 555 tacatgc 561 ||||||| Sbjct: 580 tacatgc 574
>dbj|AK063475.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-B01, full insert sequence Length = 1211 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 495 ggcatgtactccacgctcttggtctggatcaccattttcatgacggagagcggcgcggcg 554 |||||||||||||||||||| |||| |||||||| |||||| |||||| || | |||| Sbjct: 715 ggcatgtactccacgctcttcgtcttgatcaccagcctcatgatggagaggggggaggcg 656 Query: 555 tacatgc 561 ||||||| Sbjct: 655 tacatgc 649
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 58.0 bits (29), Expect = 4e-05 Identities = 152/193 (78%) Strand = Plus / Minus Query: 405 ttggggatggtgatgtagaggtcgaagtggatgagggcgtaggcagtccagcagatgcca 464 ||||| ||||||||| ||| ||||||| ||||||| ||||| | |||||||||||||| Sbjct: 4051568 ttgggtatggtgatgaagatgtcgaagcggatgagcgcgtatgacatccagcagatgcca 4051509 Query: 465 ttgacgagcgaggccacggacaggaacaggggcatgtactccacgctcttggtctggatc 524 |||| || |||| ||||| | || |||||||||||||||||||| |||| | Sbjct: 4051508 ttgaggaagctcaccaccgacagcagcaacggcatgtactccacgctctttgtcttcaca 4051449 Query: 525 accattttcatgacggagagcggcgcggcgtacatgccggtgccgaagaggacgcagagg 584 ||| |||||| || ||| || | || ||||||| |||||| || | |||||||||| Sbjct: 4051448 acctgactcatgatggtgagtggtgaggagtacatgatggtgccaaaaatgacgcagagg 4051389 Query: 585 atgccgacgacca 597 ||||||||||||| Sbjct: 4051388 atgccgacgacca 4051376 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 554 gtacatgccggtgccgaagaggacgcagaggatgccgacga 594 ||||||| |||||| |||| |||||||||||||||||||| Sbjct: 4347461 gtacatgatggtgccaaagatgacgcagaggatgccgacga 4347421 Score = 48.1 bits (24), Expect = 0.035 Identities = 81/100 (81%) Strand = Plus / Minus Query: 495 ggcatgtactccacgctcttggtctggatcaccattttcatgacggagagcggcgcggcg 554 |||||||||||||||||||| |||| | ||| ||||||||| ||| || | || | Sbjct: 4082061 ggcatgtactccacgctcttcgtcttcacaacctgactcatgacggtgagtggtgaggag 4082002 Query: 555 tacatgccggtgccgaagaggacgcagaggatgccgacga 594 |||||| |||| | |||| |||||||||||||||||||| Sbjct: 4082001 tacatgatggtgtcaaagatgacgcagaggatgccgacga 4081962 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 495 ggcatgtactccacgctcttggtct 519 |||||||||||||||||||| |||| Sbjct: 4375585 ggcatgtactccacgctcttagtct 4375561 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 570 aagaggacgcagaggatgccgacga 594 |||| |||||||||||||||||||| Sbjct: 4221810 aagatgacgcagaggatgccgacga 4221834 Score = 40.1 bits (20), Expect = 8.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 408 gggatggtgatgtagaggtcgaagtggatgag 439 |||||||||||| ||| ||||||| ||||||| Sbjct: 4082148 gggatggtgatgaagatgtcgaagcggatgag 4082117
>dbj|AP005738.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0066C12 Length = 168874 Score = 58.0 bits (29), Expect = 4e-05 Identities = 152/193 (78%) Strand = Plus / Minus Query: 405 ttggggatggtgatgtagaggtcgaagtggatgagggcgtaggcagtccagcagatgcca 464 ||||| ||||||||| ||| ||||||| ||||||| ||||| | |||||||||||||| Sbjct: 35049 ttgggtatggtgatgaagatgtcgaagcggatgagcgcgtatgacatccagcagatgcca 34990 Query: 465 ttgacgagcgaggccacggacaggaacaggggcatgtactccacgctcttggtctggatc 524 |||| || |||| ||||| | || |||||||||||||||||||| |||| | Sbjct: 34989 ttgaggaagctcaccaccgacagcagcaacggcatgtactccacgctctttgtcttcaca 34930 Query: 525 accattttcatgacggagagcggcgcggcgtacatgccggtgccgaagaggacgcagagg 584 ||| |||||| || ||| || | || ||||||| |||||| || | |||||||||| Sbjct: 34929 acctgactcatgatggtgagtggtgaggagtacatgatggtgccaaaaatgacgcagagg 34870 Query: 585 atgccgacgacca 597 ||||||||||||| Sbjct: 34869 atgccgacgacca 34857 Score = 48.1 bits (24), Expect = 0.035 Identities = 81/100 (81%) Strand = Plus / Minus Query: 495 ggcatgtactccacgctcttggtctggatcaccattttcatgacggagagcggcgcggcg 554 |||||||||||||||||||| |||| | ||| ||||||||| ||| || | || | Sbjct: 65542 ggcatgtactccacgctcttcgtcttcacaacctgactcatgacggtgagtggtgaggag 65483 Query: 555 tacatgccggtgccgaagaggacgcagaggatgccgacga 594 |||||| |||| | |||| |||||||||||||||||||| Sbjct: 65482 tacatgatggtgtcaaagatgacgcagaggatgccgacga 65443 Score = 40.1 bits (20), Expect = 8.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 408 gggatggtgatgtagaggtcgaagtggatgag 439 |||||||||||| ||| ||||||| ||||||| Sbjct: 65629 gggatggtgatgaagatgtcgaagcggatgag 65598
>dbj|AP003022.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0681B11 Length = 144091 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 402 ccgttggggatggtgatgtagaggtcgaagtggatgagggcgtaggcagtccagca 457 |||||||||||||| | |||| ||||||| ||||||| |||||||| |||||||| Sbjct: 143565 ccgttggggatggtcacatagatgtcgaagcggatgagcgcgtaggccgtccagca 143510 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 566 gccgaagaggacgcagaggatgccgacgaccatgga 601 |||||||| |||||||||||||||||||| |||||| Sbjct: 142101 gccgaagaagacgcagaggatgccgacgatcatgga 142066
>ref|XM_465955.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1562 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 495 ggcatgtactccacgctcttggtctggatcacca 528 |||||| ||||||||||||||||| ||||||||| Sbjct: 700 ggcatgaactccacgctcttggtccggatcacca 667
>gb|AC135419.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0044P19, complete sequence Length = 176917 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 495 ggcatgtactccacgctcttggtctggatcacca 528 |||||||||||||||||||| |||| |||||||| Sbjct: 42123 ggcatgtactccacgctcttcgtcttgatcacca 42090
>dbj|AP005299.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1789_D08 Length = 128673 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 495 ggcatgtactccacgctcttggtctggatcacca 528 |||||| ||||||||||||||||| ||||||||| Sbjct: 96192 ggcatgaactccacgctcttggtccggatcacca 96225
>dbj|AK103266.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033124G19, full insert sequence Length = 1562 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 495 ggcatgtactccacgctcttggtctggatcacca 528 |||||| ||||||||||||||||| ||||||||| Sbjct: 700 ggcatgaactccacgctcttggtccggatcacca 667
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 405 ttggggatggtgatgtagaggtcgaagtggatgagggcgta 445 ||||||||||||||| ||| ||||||| ||||||| ||||| Sbjct: 3976738 ttggggatggtgatgaagatgtcgaagcggatgagcgcgta 3976698 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 494 gggcatgtactccacgctcttggtctggatcac 526 ||||||||||||||||||| | | ||||||||| Sbjct: 17344084 gggcatgtactccacgctcctcgactggatcac 17344116 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 495 ggcatgtactccacgctcttggtct 519 |||||||||||||||||||| |||| Sbjct: 3976648 ggcatgtactccacgctcttcgtct 3976624 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Minus Query: 554 gtacatgccggtgccgaagaggacgcagaggatgccgacga 594 ||||||| |||||| |||| |||||||||||| ||||||| Sbjct: 3976595 gtacatgatggtgccaaagatgacgcagaggataccgacga 3976555
>dbj|AP006441.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1279D09 Length = 134793 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 554 gtacatgccggtgccgaagaggacgcagaggatgccgacga 594 ||||||| |||||| |||| |||||||||||||||||||| Sbjct: 50279 gtacatgatggtgccaaagatgacgcagaggatgccgacga 50239 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 495 ggcatgtactccacgctcttggtct 519 |||||||||||||||||||| |||| Sbjct: 78403 ggcatgtactccacgctcttagtct 78379
>gb|AY105872.1| Zea mays PCO079046 mRNA sequence Length = 1346 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Minus Query: 494 gggcatgtactccacgctcttggtctggatcac 526 |||||||||||| |||||||| ||||||||||| Sbjct: 742 gggcatgtactctacgctcttcgtctggatcac 710
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 405 ttggggatggtgatgtagaggtcgaagtggatgagggcgta 445 ||||||||||||||| ||| ||||||| ||||||| ||||| Sbjct: 3976714 ttggggatggtgatgaagatgtcgaagcggatgagcgcgta 3976674 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 494 gggcatgtactccacgctcttggtctggatcac 526 ||||||||||||||||||| | | ||||||||| Sbjct: 17298455 gggcatgtactccacgctcctcgactggatcac 17298487 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 495 ggcatgtactccacgctcttggtct 519 |||||||||||||||||||| |||| Sbjct: 3976624 ggcatgtactccacgctcttcgtct 3976600 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Minus Query: 554 gtacatgccggtgccgaagaggacgcagaggatgccgacga 594 ||||||| |||||| |||| |||||||||||| ||||||| Sbjct: 3976571 gtacatgatggtgccaaagatgacgcagaggataccgacga 3976531
>emb|AL731882.2|CNS08C8M Oryza sativa chromosome 12, . BAC OSJNBb0028H07 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132682 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 405 ttggggatggtgatgtagaggtcgaagtggatgagggcgta 445 ||||||||||||||| ||| ||||||| ||||||| ||||| Sbjct: 13148 ttggggatggtgatgaagatgtcgaagcggatgagcgcgta 13108 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 495 ggcatgtactccacgctcttggtct 519 |||||||||||||||||||| |||| Sbjct: 13058 ggcatgtactccacgctcttcgtct 13034 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Minus Query: 554 gtacatgccggtgccgaagaggacgcagaggatgccgacga 594 ||||||| |||||| |||| |||||||||||| ||||||| Sbjct: 13005 gtacatgatggtgccaaagatgacgcagaggataccgacga 12965
>emb|AL732376.2|CNS08C8Z Oryza sativa chromosome 12, . BAC OSJNBa0086B10 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 152090 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 405 ttggggatggtgatgtagaggtcgaagtggatgagggcgta 445 ||||||||||||||| ||| ||||||| ||||||| ||||| Sbjct: 138714 ttggggatggtgatgaagatgtcgaagcggatgagcgcgta 138674 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 495 ggcatgtactccacgctcttggtct 519 |||||||||||||||||||| |||| Sbjct: 138624 ggcatgtactccacgctcttcgtct 138600 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Minus Query: 554 gtacatgccggtgccgaagaggacgcagaggatgccgacga 594 ||||||| |||||| |||| |||||||||||| ||||||| Sbjct: 138571 gtacatgatggtgccaaagatgacgcagaggataccgacga 138531
>dbj|AP004361.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0062A24 Length = 148362 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 494 gggcatgtactccacgctcttggtctggatcacca 528 ||||||||||||||||||||| ||| |||||||| Sbjct: 60344 gggcatgtactccacgctcttcgtcctgatcacca 60310
>dbj|AK104255.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-D11, full insert sequence Length = 1168 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 494 gggcatgtactccacgctcttggtctggatcacca 528 ||||||||||||||||||||| ||| |||||||| Sbjct: 686 gggcatgtactccacgctcttcgtcctgatcacca 652
>dbj|AK104143.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-G10, full insert sequence Length = 1096 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 494 gggcatgtactccacgctcttggtctggatcacca 528 ||||||||||||||||||||| ||| |||||||| Sbjct: 690 gggcatgtactccacgctcttcgtcctgatcacca 656
>dbj|AK066226.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013057K13, full insert sequence Length = 1213 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 494 gggcatgtactccacgctcttggtctggatcacca 528 ||||||||||||||||||||| ||| |||||||| Sbjct: 691 gggcatgtactccacgctcttcgtcctgatcacca 657
>dbj|AB011442.1| Triticum aestivum WESR1 mRNA, partial sequence Length = 543 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 494 gggcatgtactccacgctcttggtctggatcacca 528 ||||||||||||||| ||||||||| |||||||| Sbjct: 172 gggcatgtactccacactcttggtcctgatcacca 138
>gb|AC097176.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1576_F01, complete sequence Length = 119525 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 265 cgctcttgccgtcgacgacgac 286 |||||||||||||||||||||| Sbjct: 26246 cgctcttgccgtcgacgacgac 26267
>gb|AC130602.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1122D01, complete sequence Length = 126532 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 265 cgctcttgccgtcgacgacgac 286 |||||||||||||||||||||| Sbjct: 96974 cgctcttgccgtcgacgacgac 96995
>gb|AY055805.1| Cucumis melo var. reticulatus cucumisin gene, partial cds Length = 3049 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 75 gagacaagatgaaaacaaatct 96 |||||||||||||||||||||| Sbjct: 62 gagacaagatgaaaacaaatct 83
>ref|XM_220202.2| PREDICTED: Rattus norvegicus claudin 6 (predicted) (Cldn6_predicted), mRNA Length = 697 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Minus Query: 432 tggatgagggcgtaggcagtccagcagatg 461 ||||||| ||||| |||||||||||||||| Sbjct: 471 tggatgatggcgtgggcagtccagcagatg 442
>dbj|AP003227.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0018C10 Length = 200183 Score = 44.1 bits (22), Expect = 0.54 Identities = 31/34 (91%) Strand = Plus / Minus Query: 495 ggcatgtactccacgctcttggtctggatcacca 528 |||||| ||||||||||||| |||| |||||||| Sbjct: 168972 ggcatgaactccacgctcttcgtcttgatcacca 168939
>dbj|AP003561.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1065E10 Length = 183580 Score = 44.1 bits (22), Expect = 0.54 Identities = 31/34 (91%) Strand = Plus / Minus Query: 495 ggcatgtactccacgctcttggtctggatcacca 528 |||||| ||||||||||||| |||| |||||||| Sbjct: 10563 ggcatgaactccacgctcttcgtcttgatcacca 10530
>dbj|AK071191.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023084G11, full insert sequence Length = 846 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 265 cgctcttgccgtcgacgacgac 286 |||||||||||||||||||||| Sbjct: 65 cgctcttgccgtcgacgacgac 86
>gb|AC108402.12| Mus musculus chromosome 3, clone RP24-141M5, complete sequence Length = 125057 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 64 tatgcatgaaggagacaagatgaaa 88 |||||||||||| |||||||||||| Sbjct: 30108 tatgcatgaaggtgacaagatgaaa 30084
>ref|XM_483522.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1500 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 495 ggcatgtactccacgctcttggtctggatcacc 527 |||||| |||| ||||||||||||| ||||||| Sbjct: 677 ggcatgaactcgacgctcttggtcttgatcacc 645
>ref|XM_507308.1| PREDICTED Oryza sativa (japonica cultivar-group), P0702C09.33 mRNA Length = 1517 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 495 ggcatgtactccacgctcttggtctggatcacc 527 |||||| |||| ||||||||||||| ||||||| Sbjct: 678 ggcatgaactcgacgctcttggtcttgatcacc 646
>gb|BT018599.1| Zea mays clone EL01N0449A02.d mRNA sequence Length = 1762 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 494 gggcatgtactccacgctcttggtc 518 ||||||| ||||||||||||||||| Sbjct: 747 gggcatgaactccacgctcttggtc 723
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 494 gggcatgtactccacgctcttggtc 518 ||||||| ||||||||||||||||| Sbjct: 12981268 gggcatgaactccacgctcttggtc 12981292
>gb|AC157816.4| Mus musculus chromosome 3, clone RP24-255I19, complete sequence Length = 204358 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 64 tatgcatgaaggagacaagatgaaa 88 |||||||||||| |||||||||||| Sbjct: 191820 tatgcatgaaggtgacaagatgaaa 191796
>emb|AL939129.1|SCO939129 Streptomyces coelicolor A3(2) complete genome; segment 26/29 Length = 292200 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 581 gaggatgccgacgaccatgga 601 ||||||||||||||||||||| Sbjct: 257897 gaggatgccgacgaccatgga 257877
>dbj|AB028986.1| Homo sapiens mRNA for KIAA1063 protein, partial cds Length = 5223 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 308 ggccttgcgcttgcgggcctc 328 ||||||||||||||||||||| Sbjct: 378 ggccttgcgcttgcgggcctc 358
>ref|XM_945855.1| PREDICTED: Homo sapiens ubiquitin specific peptidase 22, transcript variant 7 (USP22), mRNA Length = 5142 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 308 ggccttgcgcttgcgggcctc 328 ||||||||||||||||||||| Sbjct: 306 ggccttgcgcttgcgggcctc 286
>ref|XM_945849.1| PREDICTED: Homo sapiens ubiquitin specific peptidase 22, transcript variant 4 (USP22), mRNA Length = 4940 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 308 ggccttgcgcttgcgggcctc 328 ||||||||||||||||||||| Sbjct: 298 ggccttgcgcttgcgggcctc 278
>ref|XM_942262.1| PREDICTED: Homo sapiens ubiquitin specific peptidase 22, transcript variant 2 (USP22), mRNA Length = 3655 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 308 ggccttgcgcttgcgggcctc 328 ||||||||||||||||||||| Sbjct: 298 ggccttgcgcttgcgggcctc 278
>ref|XM_042698.7| PREDICTED: Homo sapiens ubiquitin specific peptidase 22, transcript variant 1 (USP22), mRNA Length = 5676 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 308 ggccttgcgcttgcgggcctc 328 ||||||||||||||||||||| Sbjct: 840 ggccttgcgcttgcgggcctc 820
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 495 ggcatgtactccacgctcttggtctggatcacc 527 |||||| |||| ||||||||||||| ||||||| Sbjct: 26719641 ggcatgaactcgacgctcttggtcttgatcacc 26719673
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 494 gggcatgtactccacgctcttggtc 518 ||||||| ||||||||||||||||| Sbjct: 12978043 gggcatgaactccacgctcttggtc 12978067
>gb|AC134231.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0006D11, complete sequence Length = 176637 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 494 gggcatgtactccacgctcttggtc 518 ||||||| ||||||||||||||||| Sbjct: 58966 gggcatgaactccacgctcttggtc 58990
>dbj|AP005528.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0702C09 Length = 138203 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 495 ggcatgtactccacgctcttggtctggatcacc 527 |||||| |||| ||||||||||||| ||||||| Sbjct: 131168 ggcatgaactcgacgctcttggtcttgatcacc 131200
>dbj|AP005589.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0523B07 Length = 170510 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 570 aagaggacgcagaggatgccgacga 594 |||| |||||||||||||||||||| Sbjct: 45569 aagatgacgcagaggatgccgacga 45593
>dbj|AP005439.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0033D24 Length = 186132 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 495 ggcatgtactccacgctcttggtctggatcacc 527 |||||| |||| ||||||||||||| ||||||| Sbjct: 62983 ggcatgaactcgacgctcttggtcttgatcacc 63015
>dbj|AK109114.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-155-C05, full insert sequence Length = 1492 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 494 gggcatgtactccacgctcttggtc 518 ||||||| ||||||||||||||||| Sbjct: 644 gggcatgaactccacgctcttggtc 620
>dbj|AK106127.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-F06, full insert sequence Length = 1500 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 495 ggcatgtactccacgctcttggtctggatcacc 527 |||||| |||| ||||||||||||| ||||||| Sbjct: 677 ggcatgaactcgacgctcttggtcttgatcacc 645
>dbj|AK070510.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023056B21, full insert sequence Length = 1517 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 495 ggcatgtactccacgctcttggtctggatcacc 527 |||||| |||| ||||||||||||| ||||||| Sbjct: 678 ggcatgaactcgacgctcttggtcttgatcacc 646
>emb|AM055943.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ib Length = 2013089 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 569 gaagaggacgcagaggatgcc 589 ||||||||||||||||||||| Sbjct: 544677 gaagaggacgcagaggatgcc 544657
>emb|AL713927.3|CNS07YP4 Oryza sativa chromosome 12, . BAC OSJNBa0021B03 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 154826 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 494 gggcatgtactccacgctcttggtctggatcac 526 ||||||||||||||||||| | | ||||||||| Sbjct: 59285 gggcatgtactccacgctcctcgactggatcac 59253
>ref|NM_188233.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 762 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 gccgtcgacgacgacctcgg 291 |||||||||||||||||||| Sbjct: 708 gccgtcgacgacgacctcgg 689
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 544 gcggcgcggcgtacatgccg 563 |||||||||||||||||||| Sbjct: 696195 gcggcgcggcgtacatgccg 696214
>ref|XM_323604.1| Neurospora crassa OR74A related to beta-fructofuranosidase [MIPS] (NCU04265.1) partial mRNA Length = 2088 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 418 tgtagaggtcgaagtggatg 437 |||||||||||||||||||| Sbjct: 1060 tgtagaggtcgaagtggatg 1041
>ref|XM_956163.1| Neurospora crassa OR74A related to beta-fructofuranosidase [MIPS] (NCU04265.1) partial mRNA Length = 2088 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 418 tgtagaggtcgaagtggatg 437 |||||||||||||||||||| Sbjct: 1060 tgtagaggtcgaagtggatg 1041
>ref|XM_612415.2| PREDICTED: Bos taurus similar to CG12132-PA (LOC533117), mRNA Length = 2784 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 cgacgacgacctcggtcatg 296 |||||||||||||||||||| Sbjct: 1159 cgacgacgacctcggtcatg 1140
>gb|AC113542.13| Mus musculus chromosome 5, clone RP23-195A18, complete sequence Length = 215127 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 acaagatgaaaacaaatctt 97 |||||||||||||||||||| Sbjct: 110697 acaagatgaaaacaaatctt 110678
>ref|XM_384871.1| Gibberella zeae PH-1 chromosome 3 predicted protein (FG04695.1) partial mRNA Length = 747 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 gtacatgatccatgggagaa 181 |||||||||||||||||||| Sbjct: 591 gtacatgatccatgggagaa 610
>gb|AC055855.9| Homo sapiens chromosome 15, clone RP11-352G18, complete sequence Length = 158420 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 acagtgcacaggagccctgg 148 |||||||||||||||||||| Sbjct: 5066 acagtgcacaggagccctgg 5047
>emb|X90711.1|BPLPSBLOC Bordetella pertussis lipopolysaccharide biosynthesis locus baf gene, waaA, waaB & wlbA,B,C,D,E,F,G,H,I,J & L genes Length = 15389 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 268 tcttgccgtcgacgacgacctcgg 291 ||||||||||||| |||||||||| Sbjct: 10823 tcttgccgtcgaccacgacctcgg 10800
>emb|BX640437.1| Bordetella bronchiseptica strain RB50, complete genome; segment 1/16 Length = 347356 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 268 tcttgccgtcgacgacgacctcgg 291 ||||||||||||| |||||||||| Sbjct: 159224 tcttgccgtcgaccacgacctcgg 159247
>emb|BX640423.1| Bordetella parapertussis strain 12822, complete genome; segment 1/14 Length = 348251 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 268 tcttgccgtcgacgacgacctcgg 291 ||||||||||||| |||||||||| Sbjct: 162672 tcttgccgtcgaccacgacctcgg 162695
>emb|BX640411.1| Bordetella pertussis strain Tohama I, complete genome; segment 1/12 Length = 346359 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 268 tcttgccgtcgacgacgacctcgg 291 ||||||||||||| |||||||||| Sbjct: 83736 tcttgccgtcgaccacgacctcgg 83759
>emb|AL513462.1|NCB8L3 Neurospora crassa DNA linkage group V BAC contig B8L3 Length = 112716 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 418 tgtagaggtcgaagtggatg 437 |||||||||||||||||||| Sbjct: 80817 tgtagaggtcgaagtggatg 80798
>emb|AJ007747.1|BBR007747 Bordetella bronchiseptica cosmid BbLPS1 Length = 41642 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 268 tcttgccgtcgacgacgacctcgg 291 ||||||||||||| |||||||||| Sbjct: 30741 tcttgccgtcgaccacgacctcgg 30764
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 cggcgctgccgctcttgccg 275 |||||||||||||||||||| Sbjct: 6402330 cggcgctgccgctcttgccg 6402349
>gb|AC013587.10| Homo sapiens chromosome 18, clone RP11-7L24, complete sequence Length = 128755 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 tgaaaacaaatctttcaagg 103 |||||||||||||||||||| Sbjct: 59753 tgaaaacaaatctttcaagg 59734
>gb|DQ423774.1| Uncultured eukaryote clone SAWY479 18S ribosomal RNA gene, partial sequence Length = 1040 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 aagatgaaaacaaatctttc 99 |||||||||||||||||||| Sbjct: 992 aagatgaaaacaaatctttc 1011
>gb|DQ056143.1| Coprinellus disseminatus strain C345.1 mating-type gene locus, complete sequence, and flanking genomic region Length = 75497 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 553 cgtacatgccggtgccgaag 572 |||||||||||||||||||| Sbjct: 41737 cgtacatgccggtgccgaag 41756
>gb|DQ397628.1| Cenarchaeum symbiosum clone C05A02, complete sequence Length = 37510 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 397 ccagcccgttggggatggtg 416 |||||||||||||||||||| Sbjct: 1378 ccagcccgttggggatggtg 1359
>gb|DQ397595.1| Cenarchaeum symbiosum clone C03F09, complete sequence Length = 39172 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 397 ccagcccgttggggatggtg 416 |||||||||||||||||||| Sbjct: 3244 ccagcccgttggggatggtg 3263
>gb|DQ397590.1| Cenarchaeum symbiosum clone C01G02, complete sequence Length = 39399 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 397 ccagcccgttggggatggtg 416 |||||||||||||||||||| Sbjct: 23390 ccagcccgttggggatggtg 23371
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 cgttggcggcgctgccgctc 269 |||||||||||||||||||| Sbjct: 695699 cgttggcggcgctgccgctc 695680 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 269 cttgccgtcgacgacgacct 288 |||||||||||||||||||| Sbjct: 527251 cttgccgtcgacgacgacct 527232
>gb|AC087382.11| Homo sapiens chromosome 15, clone RP11-653J6, complete sequence Length = 227632 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 acagtgcacaggagccctgg 148 |||||||||||||||||||| Sbjct: 43146 acagtgcacaggagccctgg 43165
>dbj|AP002537.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0001B06 Length = 140304 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 gccgtcgacgacgacctcgg 291 |||||||||||||||||||| Sbjct: 120641 gccgtcgacgacgacctcgg 120660
>dbj|AP003417.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0498B01 Length = 146812 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 gccgtcgacgacgacctcgg 291 |||||||||||||||||||| Sbjct: 59234 gccgtcgacgacgacctcgg 59253
>gb|AE004500.1| Pseudomonas aeruginosa PAO1, section 61 of 529 of the complete genome Length = 11849 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 cggcgctgccgctcttgccg 275 |||||||||||||||||||| Sbjct: 3055 cggcgctgccgctcttgccg 3036
>emb|AJ224769.1|BBA224769 Bordetella bronchiseptica wlbH gene Length = 1669 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 268 tcttgccgtcgacgacgacctcgg 291 ||||||||||||| |||||||||| Sbjct: 1169 tcttgccgtcgaccacgacctcgg 1146
>emb|AJ224768.1|BPA224768 Bordetella parapertussis wlbH gene Length = 1669 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 268 tcttgccgtcgacgacgacctcgg 291 ||||||||||||| |||||||||| Sbjct: 1169 tcttgccgtcgaccacgacctcgg 1146
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 cggcgctgccgctcttgccg 275 |||||||||||||||||||| Sbjct: 475005 cggcgctgccgctcttgccg 474986
>gb|AY108274.1| Zea mays PCO095185 mRNA sequence Length = 784 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 tcttgccgtcgacgacgacc 287 |||||||||||||||||||| Sbjct: 263 tcttgccgtcgacgacgacc 244
>gb|AF067845.1|AF067845 Homo sapiens clone P1-4248, complete sequence Length = 108932 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 325 cctccaggatctcctgcgtc 344 |||||||||||||||||||| Sbjct: 72081 cctccaggatctcctgcgtc 72062
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 tggccgttggcggcgctgcc 265 |||||||||||||||||||| Sbjct: 1038086 tggccgttggcggcgctgcc 1038067
>emb|AJ845083.2| Streptomyces tenjimariensis istamycin biosynthesis cluster, strain ATCC 31603 Length = 67904 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 273 ccgtcgacgacgacctcggt 292 |||||||||||||||||||| Sbjct: 29186 ccgtcgacgacgacctcggt 29205
>gb|M33814.1|PSEGDC P.aeruginosa trpG, trpD, and trpC genes, complete cds Length = 2807 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 cggcgctgccgctcttgccg 275 |||||||||||||||||||| Sbjct: 1207 cggcgctgccgctcttgccg 1188 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,979,443 Number of Sequences: 3902068 Number of extensions: 3979443 Number of successful extensions: 81384 Number of sequences better than 10.0: 111 Number of HSP's better than 10.0 without gapping: 118 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 80217 Number of HSP's gapped (non-prelim): 1156 length of query: 621 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 598 effective length of database: 17,143,297,704 effective search space: 10251692026992 effective search space used: 10251692026992 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
