ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal4f09 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK104149.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-D01, full insert sequence Length = 1348 Score = 244 bits (123), Expect = 3e-61 Identities = 246/287 (85%) Strand = Plus / Minus Query: 353 gtaaggtcaatatcgcccattcctgtatcttcctcatcttcactatcatcatcaccagca 412 |||||||| || || |||||||||||||||||||| |||||||| ||| |||||||| || Sbjct: 1103 gtaaggtcgatgtcacccattcctgtatcttcctcctcttcactgtcagcatcaccatca 1044 Query: 413 acctccgcgttttgctcaaccagggtatccaactgggcgttcaatagcttatcttccctc 472 |||||||| |||||||| ||||| || | || | || || || |||||||| ||| Sbjct: 1043 acctccgcattttgctcgttaagggtttctatgtgctcattgaacagtttatcttctctc 984 Query: 473 tcactcacagctctaggtgcttctttcactaccaactttcctttgtgtttttcaatctct 532 |||||||||||||| |||||||| || |||| ||||||||| ||||| || || ||||| Sbjct: 983 tcactcacagctctcggtgcttccttaactatcaactttcccttgtgcttctcgatctca 924 Query: 533 gctgtgcacgctttaactgcatcagtgagaactgagatgccttggtccttgtcgagagtt 592 |||||||| ||||||| |||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 923 gctgtgcaagctttaattgcatcagtgagaactgaaatgccttggtccttgtcaagagtt 864 Query: 593 tgtgtagtcagtacataaagaggaggagcaactaacttaatcttcac 639 ||||| ||||| |||||||| ||||| ||||||| |||||||||||| Sbjct: 863 tgtgtggtcagcacataaagtggaggtgcaactagcttaatcttcac 817
>dbj|AK073460.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033040F15, full insert sequence Length = 1454 Score = 244 bits (123), Expect = 3e-61 Identities = 246/287 (85%) Strand = Plus / Minus Query: 353 gtaaggtcaatatcgcccattcctgtatcttcctcatcttcactatcatcatcaccagca 412 |||||||| || || |||||||||||||||||||| |||||||| ||| |||||||| || Sbjct: 1187 gtaaggtcgatgtcacccattcctgtatcttcctcctcttcactgtcagcatcaccatca 1128 Query: 413 acctccgcgttttgctcaaccagggtatccaactgggcgttcaatagcttatcttccctc 472 |||||||| |||||||| ||||| || | || | || || || |||||||| ||| Sbjct: 1127 acctccgcattttgctcgttaagggtttctatgtgctcattgaacagtttatcttctctc 1068 Query: 473 tcactcacagctctaggtgcttctttcactaccaactttcctttgtgtttttcaatctct 532 |||||||||||||| |||||||| || |||| ||||||||| ||||| || || ||||| Sbjct: 1067 tcactcacagctctcggtgcttccttaactatcaactttcccttgtgcttctcgatctca 1008 Query: 533 gctgtgcacgctttaactgcatcagtgagaactgagatgccttggtccttgtcgagagtt 592 |||||||| ||||||| |||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 1007 gctgtgcaagctttaattgcatcagtgagaactgaaatgccttggtccttgtcaagagtt 948 Query: 593 tgtgtagtcagtacataaagaggaggagcaactaacttaatcttcac 639 ||||| ||||| |||||||| ||||| ||||||| |||||||||||| Sbjct: 947 tgtgtggtcagcacataaagtggaggtgcaactagcttaatcttcac 901
>dbj|AK105818.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-D03, full insert sequence Length = 1377 Score = 236 bits (119), Expect = 7e-59 Identities = 245/287 (85%) Strand = Plus / Minus Query: 353 gtaaggtcaatatcgcccattcctgtatcttcctcatcttcactatcatcatcaccagca 412 |||||||| || || |||||||||||||||||||| |||||||| ||| |||||||| || Sbjct: 1060 gtaaggtcgatgtcacccattcctgtatcttcctcctcttcactgtcagcatcaccatca 1001 Query: 413 acctccgcgttttgctcaaccagggtatccaactgggcgttcaatagcttatcttccctc 472 |||||||| |||||||| ||||| || | || | || || || |||||||| ||| Sbjct: 1000 acctccgcattttgctcgttaagggtttctatgtgctcattgaacagtttatcttctctc 941 Query: 473 tcactcacagctctaggtgcttctttcactaccaactttcctttgtgtttttcaatctct 532 |||||||||||||| |||||||| || |||| ||||||||| ||| | || || ||||| Sbjct: 940 tcactcacagctctcggtgcttccttaactatcaactttcccttgcgcttctcgatctca 881 Query: 533 gctgtgcacgctttaactgcatcagtgagaactgagatgccttggtccttgtcgagagtt 592 |||||||| ||||||| |||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 880 gctgtgcaagctttaattgcatcagtgagaactgaaatgccttggtccttgtcaagagtt 821 Query: 593 tgtgtagtcagtacataaagaggaggagcaactaacttaatcttcac 639 ||||| ||||| |||||||| ||||| ||||||| |||||||||||| Sbjct: 820 tgtgtggtcagcacataaagtggaggtgcaactagcttaatcttcac 774
>emb|AJ867288.1| Oryza sativa (indica cultivar-group) mRNA for eukaryotic translation initiation factor 2 alpha (eIF2 alpha gene) Length = 1020 Score = 236 bits (119), Expect = 7e-59 Identities = 245/287 (85%) Strand = Plus / Minus Query: 353 gtaaggtcaatatcgcccattcctgtatcttcctcatcttcactatcatcatcaccagca 412 |||||||| || || |||||||||||||||||||| |||||||| ||| |||||||| || Sbjct: 995 gtaaggtcgatgtcacccattcctgtatcttcctcctcttcactgtcagcatcaccatca 936 Query: 413 acctccgcgttttgctcaaccagggtatccaactgggcgttcaatagcttatcttccctc 472 |||||||| |||||||| ||||| || | || | || || || |||||||| ||| Sbjct: 935 acctccgcattttgctcgttaagggtttctatgtgctcattgaacagtttatcttctctc 876 Query: 473 tcactcacagctctaggtgcttctttcactaccaactttcctttgtgtttttcaatctct 532 |||||||||||||| |||||||| || |||| ||||||||| ||| | || || ||||| Sbjct: 875 tcactcacagctctcggtgcttccttaactatcaactttcccttgcgcttctcgatctca 816 Query: 533 gctgtgcacgctttaactgcatcagtgagaactgagatgccttggtccttgtcgagagtt 592 |||||||| ||||||| |||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 815 gctgtgcaagctttaattgcatcagtgagaactgaaatgccttggtccttgtcaagagtt 756 Query: 593 tgtgtagtcagtacataaagaggaggagcaactaacttaatcttcac 639 ||||| ||||| |||||||| ||||| ||||||| |||||||||||| Sbjct: 755 tgtgtggtcagcacataaagtggaggtgcaactagcttaatcttcac 709
>gb|AY103903.1| Zea mays PCO078161 mRNA sequence Length = 1384 Score = 222 bits (112), Expect = 1e-54 Identities = 253/300 (84%) Strand = Plus / Minus Query: 340 gacgccagagttcgtaaggtcaatatcgcccattcctgtatcttcctcatcttcactatc 399 ||||||||| || ||||| |||| | ||||||||||||||||||||| |||||||| || Sbjct: 1146 gacgccagaatttgtaagatcaacgttgcccattcctgtatcttcctcctcttcactgtc 1087 Query: 400 atcatcaccagcaacctccgcgttttgctcaaccagggtatccaactgggcgttcaatag 459 | |||||| | ||||| |||||||| || | |||| ||| | |||| || ||||| Sbjct: 1086 cacgtcaccatcgacctctgcgttttgttccattagggaatcaatctggtcgaggaatag 1027 Query: 460 cttatcttccctctcactcacagctctaggtgcttctttcactaccaactttcctttgtg 519 ||| ||||||| ||| || |||||||| |||| ||| |||||||| ||||||||||||| Sbjct: 1026 cttgtcttcccgctcgctaacagctcttggtggttccttcactactaactttcctttgta 967 Query: 520 tttttcaatctctgctgtgcacgctttaactgcatcagtgagaactgagatgccttggtc 579 |||||||||||||||||| || || || |||||||||||||||||||| ||||||||||| Sbjct: 966 tttttcaatctctgctgtacaagccttgactgcatcagtgagaactgaaatgccttggtc 907 Query: 580 cttgtcgagagtttgtgtagtcagtacataaagaggaggagcaactaacttaatcttcac 639 |||||| || || ||||| |||| |||||||| ||||||||||||| |||||||||||| Sbjct: 906 cttgtcaagggtctgtgtggtcaaaacataaagtggaggagcaactagcttaatcttcac 847
>gb|BT016294.1| Zea mays clone Contig127 mRNA sequence Length = 1270 Score = 216 bits (109), Expect = 7e-53 Identities = 280/337 (83%) Strand = Plus / Minus Query: 303 ctcatccaagtcaactaatgtagactcagtccgcatggacgccagagttcgtaaggtcaa 362 ||||||||| ||||| | ||||| || ||| ||| ||||||||| || |||| ||| | Sbjct: 991 ctcatccaaatcaaccagtgtagccttagtaagcagcgacgccagaatttgtaatgtcga 932 Query: 363 tatcgcccattcctgtatcttcctcatcttcactatcatcatcaccagcaacctccgcgt 422 || |||||||||||||||||||| |||||||| ||| |||||||| | ||||| |||| Sbjct: 931 cgtcccccattcctgtatcttcctcctcttcactgtcagcatcaccatcgacctctgcgt 872 Query: 423 tttgctcaaccagggtatccaactgggcgttcaatagcttatcttccctctcactcacag 482 ||||||| | |||| ||| | |||| || |||||||| ||||||| |||||| |||| Sbjct: 871 tttgctccattagggaatcaatctggtcgaggaatagcttgtcttcccgctcactaacag 812 Query: 483 ctctaggtgcttctttcactaccaactttcctttgtgtttttcaatctctgctgtgcacg 542 |||| |||| ||| |||||||| ||||||||||||| ||||||||||||||||| || | Sbjct: 811 ctcttggtggttccttcactactaactttcctttgtacttttcaatctctgctgtacaag 752 Query: 543 ctttaactgcatcagtgagaactgagatgccttggtccttgtcgagagtttgtgtagtca 602 | || |||||| |||||||||||| |||||||| |||||||| || || ||||| |||| Sbjct: 751 ccttgactgcagtagtgagaactgaaatgccttgatccttgtcaagggtctgtgtggtca 692 Query: 603 gtacataaagaggaggagcaactaacttaatcttcac 639 |||||||| ||||||||||||| |||||||||||| Sbjct: 691 aaacataaagtggaggagcaactagcttaatcttcac 655
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 109 bits (55), Expect = 1e-20 Identities = 91/103 (88%) Strand = Plus / Minus Query: 479 acagctctaggtgcttctttcactaccaactttcctttgtgtttttcaatctctgctgtg 538 |||||||| |||||||| || |||| ||||||||| ||||| || || ||||| |||||| Sbjct: 10347410 acagctctcggtgcttccttaactatcaactttcccttgtgcttctcgatctcagctgtg 10347351 Query: 539 cacgctttaactgcatcagtgagaactgagatgccttggtcct 581 || ||||||| |||||||||||||||||| ||||||||||||| Sbjct: 10347350 caagctttaattgcatcagtgagaactgaaatgccttggtcct 10347308 Score = 89.7 bits (45), Expect = 1e-14 Identities = 69/77 (89%) Strand = Plus / Minus Query: 353 gtaaggtcaatatcgcccattcctgtatcttcctcatcttcactatcatcatcaccagca 412 |||||||| || || |||||||||||||||||||| |||||||| ||| |||||||| || Sbjct: 10347688 gtaaggtcgatgtcacccattcctgtatcttcctcctcttcactgtcagcatcaccatca 10347629 Query: 413 acctccgcgttttgctc 429 |||||||| |||||||| Sbjct: 10347628 acctccgcattttgctc 10347612 Score = 73.8 bits (37), Expect = 6e-10 Identities = 55/61 (90%) Strand = Plus / Minus Query: 579 ccttgtcgagagtttgtgtagtcagtacataaagaggaggagcaactaacttaatcttca 638 ||||||| ||||||||||| ||||| |||||||| ||||| ||||||| ||||||||||| Sbjct: 10346543 ccttgtcaagagtttgtgtggtcagcacataaagtggaggtgcaactagcttaatcttca 10346484 Query: 639 c 639 | Sbjct: 10346483 c 10346483
>gb|AC137931.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0039F10, complete sequence Length = 139714 Score = 109 bits (55), Expect = 1e-20 Identities = 91/103 (88%) Strand = Plus / Minus Query: 479 acagctctaggtgcttctttcactaccaactttcctttgtgtttttcaatctctgctgtg 538 |||||||| |||||||| || |||| ||||||||| ||||| || || ||||| |||||| Sbjct: 3963 acagctctcggtgcttccttaactatcaactttcccttgtgcttctcgatctcagctgtg 3904 Query: 539 cacgctttaactgcatcagtgagaactgagatgccttggtcct 581 || ||||||| |||||||||||||||||| ||||||||||||| Sbjct: 3903 caagctttaattgcatcagtgagaactgaaatgccttggtcct 3861 Score = 89.7 bits (45), Expect = 1e-14 Identities = 69/77 (89%) Strand = Plus / Minus Query: 353 gtaaggtcaatatcgcccattcctgtatcttcctcatcttcactatcatcatcaccagca 412 |||||||| || || |||||||||||||||||||| |||||||| ||| |||||||| || Sbjct: 4241 gtaaggtcgatgtcacccattcctgtatcttcctcctcttcactgtcagcatcaccatca 4182 Query: 413 acctccgcgttttgctc 429 |||||||| |||||||| Sbjct: 4181 acctccgcattttgctc 4165 Score = 73.8 bits (37), Expect = 6e-10 Identities = 55/61 (90%) Strand = Plus / Minus Query: 579 ccttgtcgagagtttgtgtagtcagtacataaagaggaggagcaactaacttaatcttca 638 ||||||| ||||||||||| ||||| |||||||| ||||| ||||||| ||||||||||| Sbjct: 3096 ccttgtcaagagtttgtgtggtcagcacataaagtggaggtgcaactagcttaatcttca 3037 Query: 639 c 639 | Sbjct: 3036 c 3036
>gb|AC118670.2| Genomic sequence for Oryza sativa, Nipponbare stain, clone OSJNBb0036D03, from chromosome 3, complete sequence Length = 125800 Score = 109 bits (55), Expect = 1e-20 Identities = 91/103 (88%) Strand = Plus / Minus Query: 479 acagctctaggtgcttctttcactaccaactttcctttgtgtttttcaatctctgctgtg 538 |||||||| |||||||| || |||| ||||||||| ||||| || || ||||| |||||| Sbjct: 60876 acagctctcggtgcttccttaactatcaactttcccttgtgcttctcgatctcagctgtg 60817 Query: 539 cacgctttaactgcatcagtgagaactgagatgccttggtcct 581 || ||||||| |||||||||||||||||| ||||||||||||| Sbjct: 60816 caagctttaattgcatcagtgagaactgaaatgccttggtcct 60774 Score = 89.7 bits (45), Expect = 1e-14 Identities = 69/77 (89%) Strand = Plus / Minus Query: 353 gtaaggtcaatatcgcccattcctgtatcttcctcatcttcactatcatcatcaccagca 412 |||||||| || || |||||||||||||||||||| |||||||| ||| |||||||| || Sbjct: 61154 gtaaggtcgatgtcacccattcctgtatcttcctcctcttcactgtcagcatcaccatca 61095 Query: 413 acctccgcgttttgctc 429 |||||||| |||||||| Sbjct: 61094 acctccgcattttgctc 61078 Score = 73.8 bits (37), Expect = 6e-10 Identities = 55/61 (90%) Strand = Plus / Minus Query: 579 ccttgtcgagagtttgtgtagtcagtacataaagaggaggagcaactaacttaatcttca 638 ||||||| ||||||||||| ||||| |||||||| ||||| ||||||| ||||||||||| Sbjct: 60009 ccttgtcaagagtttgtgtggtcagcacataaagtggaggtgcaactagcttaatcttca 59950 Query: 639 c 639 | Sbjct: 59949 c 59949
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 109 bits (55), Expect = 1e-20 Identities = 91/103 (88%) Strand = Plus / Minus Query: 479 acagctctaggtgcttctttcactaccaactttcctttgtgtttttcaatctctgctgtg 538 |||||||| |||||||| || |||| ||||||||| ||||| || || ||||| |||||| Sbjct: 10345511 acagctctcggtgcttccttaactatcaactttcccttgtgcttctcgatctcagctgtg 10345452 Query: 539 cacgctttaactgcatcagtgagaactgagatgccttggtcct 581 || ||||||| |||||||||||||||||| ||||||||||||| Sbjct: 10345451 caagctttaattgcatcagtgagaactgaaatgccttggtcct 10345409 Score = 89.7 bits (45), Expect = 1e-14 Identities = 69/77 (89%) Strand = Plus / Minus Query: 353 gtaaggtcaatatcgcccattcctgtatcttcctcatcttcactatcatcatcaccagca 412 |||||||| || || |||||||||||||||||||| |||||||| ||| |||||||| || Sbjct: 10345789 gtaaggtcgatgtcacccattcctgtatcttcctcctcttcactgtcagcatcaccatca 10345730 Query: 413 acctccgcgttttgctc 429 |||||||| |||||||| Sbjct: 10345729 acctccgcattttgctc 10345713 Score = 73.8 bits (37), Expect = 6e-10 Identities = 55/61 (90%) Strand = Plus / Minus Query: 579 ccttgtcgagagtttgtgtagtcagtacataaagaggaggagcaactaacttaatcttca 638 ||||||| ||||||||||| ||||| |||||||| ||||| ||||||| ||||||||||| Sbjct: 10344644 ccttgtcaagagtttgtgtggtcagcacataaagtggaggtgcaactagcttaatcttca 10344585 Query: 639 c 639 | Sbjct: 10344584 c 10344584
>gb|BT013965.1| Lycopersicon esculentum clone 132990R, mRNA sequence Length = 1427 Score = 63.9 bits (32), Expect = 6e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 358 gtcaatatcgcccattcctgtatcttcctcatcttcactatcatcatcacca 409 |||||| || ||||| |||||||||||||| ||||||||||| ||||||||| Sbjct: 1148 gtcaatttctcccatacctgtatcttcctcctcttcactatcttcatcacca 1097
>ref|NM_185566.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1017 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 470 ctctcactcacagctctaggtgcttctttcactaccaactttcctttgtgtttttcaat 528 ||||| |||||||||||||| ||||| || || ||||| || || |||||||||||||| Sbjct: 881 ctctcgctcacagctctaggcgcttcctttaccaccaatttccccttgtgtttttcaat 823
>emb|CR378662.1| M.truncatula DNA sequence from clone MTH2-41N19 on chromosome 3, complete sequence Length = 119227 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 365 tcgcccattcctgtatcttcctcatcttcactatcatcatc 405 ||||||||||| |||||||| || |||||||| |||||||| Sbjct: 100174 tcgcccattccagtatcttcttcctcttcactgtcatcatc 100134 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Minus Query: 365 tcgcccattcctgtatcttcctcatcttcactatcatcatc 405 ||||||||||| |||||||| || |||||||| || ||||| Sbjct: 114016 tcgcccattccagtatcttcttcctcttcactgtcttcatc 113976 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Minus Query: 365 tcgcccattcctgtatcttcctcatcttcactatcatcatc 405 ||||||||||| |||||||| || |||||||| || ||||| Sbjct: 108537 tcgcccattccagtatcttcttcctcttcactgtcgtcatc 108497
>gb|AC145994.2| Pan troglodytes BAC clone RP43-13J21 from 7, complete sequence Length = 164345 Score = 50.1 bits (25), Expect = 0.009 Identities = 38/41 (92%), Gaps = 1/41 (2%) Strand = Plus / Minus Query: 134 ataacaacaaaactattttcactccaaaga-aagaaaataa 173 |||| ||||||||||| ||||||||||||| |||||||||| Sbjct: 112995 ataaaaacaaaactatattcactccaaagagaagaaaataa 112955
>gb|AC083870.2|AC083870 Homo sapiens chromosome 7 clone RP11-248K17, complete sequence Length = 171530 Score = 50.1 bits (25), Expect = 0.009 Identities = 38/41 (92%), Gaps = 1/41 (2%) Strand = Plus / Plus Query: 134 ataacaacaaaactattttcactccaaaga-aagaaaataa 173 |||| ||||||||||| ||||||||||||| |||||||||| Sbjct: 76766 ataaaaacaaaactatattcactccaaagagaagaaaataa 76806
>ref|XM_385771.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG05595.1) partial mRNA Length = 1446 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 380 tcttcctcatcttcactatcatc 402 ||||||||||||||||||||||| Sbjct: 1076 tcttcctcatcttcactatcatc 1054
>emb|Z79755.1|CEF43G9 Caenorhabditis elegans Cosmid F43G9, complete sequence Length = 38166 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 382 ttcctcatcttcactatcatcatcacc 408 |||||||| |||||||||||||||||| Sbjct: 36216 ttcctcattttcactatcatcatcacc 36190
>emb|AL591901.12| Human DNA sequence from clone RP11-400C4 on chromosome 1, complete sequence Length = 129844 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 388 atcttcactatcatcatcaccagcaac 414 |||||||||||||||||||||| |||| Sbjct: 9860 atcttcactatcatcatcaccatcaac 9834
>ref|NM_059940.2| Caenorhabditis elegans F43G9.12 (F43G9.12) mRNA, complete cds Length = 2637 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 382 ttcctcatcttcactatcatcatcacc 408 |||||||| |||||||||||||||||| Sbjct: 798 ttcctcattttcactatcatcatcacc 772
>dbj|BS000195.1| Pan troglodytes chromosome 22 clone:PTB-014E11, map 22, complete sequences Length = 251753 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 386 tcatcttcactatcatcatcacc 408 ||||||||||||||||||||||| Sbjct: 93452 tcatcttcactatcatcatcacc 93474
>dbj|AB231868.1| Nematostella vectensis genes for zinc finger proteins Nv-ZicB, Nv-ZicC, Nv-ZicD, Nv-ZicE, complete cds Length = 177971 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 383 tcctcatcttcactatcatcatcacca 409 ||||||||||||| ||||||||||||| Sbjct: 4118 tcctcatcttcaccatcatcatcacca 4144
>ref|XM_629330.1| Dictyostelium discoideum hypothetical protein (DDB0191785), partial mRNA Length = 2454 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 383 tcctcatcttcactatcatcat 404 |||||||||||||||||||||| Sbjct: 206 tcctcatcttcactatcatcat 185
>gb|DQ124066.1| Coffea arabica clone MN-SSH2-G05 mRNA sequence Length = 439 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 613 aggaggagcaactaacttaatcttca 638 |||||||||||||| ||||||||||| Sbjct: 344 aggaggagcaactaccttaatcttca 369
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.56 Identities = 43/50 (86%) Strand = Plus / Plus Query: 479 acagctctaggtgcttctttcactaccaactttcctttgtgtttttcaat 528 ||||||||||| ||||| || || ||||| || || |||||||||||||| Sbjct: 29423101 acagctctaggcgcttcctttaccaccaatttccccttgtgtttttcaat 29423150
>dbj|AP004333.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0034A04 Length = 151263 Score = 44.1 bits (22), Expect = 0.56 Identities = 43/50 (86%) Strand = Plus / Plus Query: 479 acagctctaggtgcttctttcactaccaactttcctttgtgtttttcaat 528 ||||||||||| ||||| || || ||||| || || |||||||||||||| Sbjct: 86023 acagctctaggcgcttcctttaccaccaatttccccttgtgtttttcaat 86072
>dbj|AP006109.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT39G11, TM0195a, complete sequence Length = 73192 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 158 caaagaaagaaaataaaatcag 179 |||||||||||||||||||||| Sbjct: 60796 caaagaaagaaaataaaatcag 60817
>emb|AL683809.7| Mouse DNA sequence from clone RP23-440B21 on chromosome X, complete sequence Length = 213187 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 164 aagaaaataaaatcaggtgctg 185 |||||||||||||||||||||| Sbjct: 89315 aagaaaataaaatcaggtgctg 89294
>ref|NM_119291.2| Arabidopsis thaliana transcription factor AT4G31420 transcript variant AT4G31420.1 mRNA, complete cds Length = 1547 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 386 tcatcttcactatcatcatca 406 ||||||||||||||||||||| Sbjct: 553 tcatcttcactatcatcatca 533
>ref|NM_202923.1| Arabidopsis thaliana unknown protein AT4G31420 transcript variant AT4G31420.2 mRNA, complete cds Length = 1550 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 386 tcatcttcactatcatcatca 406 ||||||||||||||||||||| Sbjct: 553 tcatcttcactatcatcatca 533
>gb|AC165972.4| Mus musculus BAC clone RP23-87D12 from chromosome 17, complete sequence Length = 199737 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 160 aagaaagaaaataaaatcagg 180 ||||||||||||||||||||| Sbjct: 52932 aagaaagaaaataaaatcagg 52952
>gb|AC153494.25| Mus musculus 10 BAC RP23-345J24 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 231991 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 373 tcctgtatcttcctcatcttc 393 ||||||||||||||||||||| Sbjct: 35786 tcctgtatcttcctcatcttc 35766
>ref|XM_631882.1| Dictyostelium discoideum hypothetical protein (DDB0219292), partial mRNA Length = 1944 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 386 tcatcttcactatcatcatcaccag 410 |||||||||||||||||| |||||| Sbjct: 1895 tcatcttcactatcatcaacaccag 1871
>ref|XM_637779.1| Dictyostelium discoideum hypothetical protein (DDB0168302), partial mRNA Length = 1224 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 385 ctcatcttcactatcatcatcacca 409 |||||||| |||||||||||||||| Sbjct: 984 ctcatctttactatcatcatcacca 1008
>ref|XM_635283.1| Dictyostelium discoideum hypothetical protein (DDB0205052), partial mRNA Length = 1185 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 386 tcatcttcactatcatcatca 406 ||||||||||||||||||||| Sbjct: 542 tcatcttcactatcatcatca 522
>gb|AC165225.5| Mus musculus chromosome 3, clone RP24-70J13, complete sequence Length = 205069 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 160 aagaaagaaaataaaatcagg 180 ||||||||||||||||||||| Sbjct: 48642 aagaaagaaaataaaatcagg 48662
>gb|AC147079.4| Pan troglodytes BAC clone RP43-184E24 from 7, complete sequence Length = 218644 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 386 tcatcttcactatcatcatcaccagcaac 414 ||||||||| |||||||||||||| |||| Sbjct: 116770 tcatcttcattatcatcatcaccatcaac 116798
>ref|XM_459254.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0D19173g) partial mRNA Length = 3423 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 380 tcttcctcatcttcactatca 400 ||||||||||||||||||||| Sbjct: 1847 tcttcctcatcttcactatca 1827
>gb|AC147229.5| Mus musculus BAC clone RP23-236E9 from chromosome 19, complete sequence Length = 162400 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 150 tttcactccaaagaaagaaaa 170 ||||||||||||||||||||| Sbjct: 142730 tttcactccaaagaaagaaaa 142710
>gb|AC146457.3| Pan troglodytes BAC clone CH251-330N17 from Y, complete sequence Length = 162813 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 392 tcactatcatcatcaccagca 412 ||||||||||||||||||||| Sbjct: 15613 tcactatcatcatcaccagca 15593
>gb|AC147663.3| Pan troglodytes BAC clone CH251-304A22 from Y, complete sequence Length = 162854 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 392 tcactatcatcatcaccagca 412 ||||||||||||||||||||| Sbjct: 25982 tcactatcatcatcaccagca 26002
>gb|AC104200.12| Mus musculus chromosome 13, clone RP24-512M2, complete sequence Length = 171912 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 caaagaaagaaaataaaatca 178 ||||||||||||||||||||| Sbjct: 93482 caaagaaagaaaataaaatca 93462
>gb|AC115581.3| Dictyostelium discoideum chromosome 2 map complement(3527391-3470188) strain AX4, complete sequence Length = 57203 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 385 ctcatcttcactatcatcatcacca 409 |||||||| |||||||||||||||| Sbjct: 33539 ctcatctttactatcatcatcacca 33515
>gb|AC125195.4| Mus musculus BAC clone RP23-246M2 from 2, complete sequence Length = 195041 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 47 gtacaaagaacaccagcaaaa 67 ||||||||||||||||||||| Sbjct: 6192 gtacaaagaacaccagcaaaa 6172
>ref|NG_000839.1| Homo sapiens cystatin locus (CST@) on chromosome 20 Length = 477159 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 392 tcactatcatcatcaccagca 412 ||||||||||||||||||||| Sbjct: 132954 tcactatcatcatcaccagca 132934
>ref|XM_719918.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY04682) partial mRNA Length = 3846 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 380 tcttcctcatcttcactatcatcat 404 ||||| ||||||||||||||||||| Sbjct: 1085 tcttcatcatcttcactatcatcat 1061
>gb|AC073316.6| Homo sapiens BAC clone RP11-191P7 from 7, complete sequence Length = 148930 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 386 tcatcttcactatcatcatcaccagcaac 414 ||||||||| |||||||||||||| |||| Sbjct: 106319 tcatcttcattatcatcatcaccaccaac 106291 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 386 tcatcttcactatcatcatcacca 409 |||||||||| ||||||||||||| Sbjct: 106262 tcatcttcaccatcatcatcacca 106239
>gb|AC115934.10| Mus musculus chromosome 3, clone RP24-539A2, complete sequence Length = 147659 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 160 aagaaagaaaataaaatcagg 180 ||||||||||||||||||||| Sbjct: 12724 aagaaagaaaataaaatcagg 12704
>emb|AL627233.9| Human DNA sequence from clone RP11-305I2 on chromosome X Contains the CYLC1 gene for cylicin, basic protein of sperm head cytoskeleton 1, complete sequence Length = 75523 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 159 aaagaaagaaaataaaatcag 179 ||||||||||||||||||||| Sbjct: 63869 aaagaaagaaaataaaatcag 63889
>emb|AL591074.10| Human DNA sequence from clone XXyac-60D10 on chromosome 20 Contains the CST5 gene for cystatin D, the CST2 gene for cystatin SA, the CST1 gene for cystatin SN and the CSTP2 gene for cystatin pseudogene 2, complete sequence Length = 203076 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 392 tcactatcatcatcaccagca 412 ||||||||||||||||||||| Sbjct: 73758 tcactatcatcatcaccagca 73778
>emb|AL356986.11| Human DNA sequence from clone RP11-395N6 on chromosome 1 Contains the 5' end of a known gene (FLJ10276), a glyceraldehyde-3-phosphate dehydrogenase (GAPD) pseudogene, a novel pseudogene, the 5' end of the ZBTB8 gene for zinc finger and BTB domain containing 8 and five CpG islands, complete sequence Length = 98390 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 386 tcatcttcactatcatcatcaccag 410 ||||| ||||||||||||||||||| Sbjct: 79422 tcatcatcactatcatcatcaccag 79446
>emb|AL355582.8| Human DNA sequence from clone RP11-69L15 on chromosome 9, complete sequence Length = 115848 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 159 aaagaaagaaaataaaatcag 179 ||||||||||||||||||||| Sbjct: 8439 aaagaaagaaaataaaatcag 8459
>emb|AL109941.17|HSJ435K13 Human DNA sequence from clone RP3-435K13 on chromosome 6q14.1-16.1 Contains a novel pseudogene, complete sequence Length = 151301 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 134 ataacaacaaaactattttca 154 ||||||||||||||||||||| Sbjct: 57240 ataacaacaaaactattttca 57260
>emb|AL049562.7|HSDA86H19 Human DNA sequence from clone RP6-86H19 on chromosome Xq25-26.2, complete sequence Length = 91201 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 386 tcatcttcactatcatcatca 406 ||||||||||||||||||||| Sbjct: 24420 tcatcttcactatcatcatca 24440
>gb|AY150375.1| Arabidopsis thaliana putative zinc finger protein (At4g31420) mRNA, complete cds Length = 1246 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 386 tcatcttcactatcatcatca 406 ||||||||||||||||||||| Sbjct: 392 tcatcttcactatcatcatca 372
>gb|AF370269.1| Arabidopsis thaliana putative zinc finger protein (At4g31420) mRNA, complete cds Length = 1498 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 386 tcatcttcactatcatcatca 406 ||||||||||||||||||||| Sbjct: 553 tcatcttcactatcatcatca 533
>emb|CR382136.1| Debaryomyces hansenii chromosome D of strain CBS767 of Debaryomyces hansenii Length = 1602771 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 380 tcttcctcatcttcactatca 400 ||||||||||||||||||||| Sbjct: 1469865 tcttcctcatcttcactatca 1469885
>emb|AL080283.1|ATF3L17 Arabidopsis thaliana DNA chromosome 4, BAC clone F3L17 (ESSA project) Length = 94319 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 386 tcatcttcactatcatcatca 406 ||||||||||||||||||||| Sbjct: 24981 tcatcttcactatcatcatca 25001
>emb|AL161579.2|ATCHRIV75 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 75 Length = 196242 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 386 tcatcttcactatcatcatca 406 ||||||||||||||||||||| Sbjct: 13046 tcatcttcactatcatcatca 13066
>emb|AL021633.2|ATF8F16 Arabidopsis thaliana DNA chromosome 4, BAC clone F8F16 (ESSA project) Length = 93038 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 386 tcatcttcactatcatcatca 406 ||||||||||||||||||||| Sbjct: 86864 tcatcttcactatcatcatca 86884
>emb|AL669903.16| Mouse DNA sequence from clone RP23-72A14 on chromosome 11 Contains a CpG island, complete sequence Length = 208028 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 394 actatcatcatcaccagcaac 414 ||||||||||||||||||||| Sbjct: 163461 actatcatcatcaccagcaac 163481
>emb|CR847548.8| Zebrafish DNA sequence from clone DKEY-185L9 in linkage group 8, complete sequence Length = 249728 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 159 aaagaaagaaaataaaatcag 179 ||||||||||||||||||||| Sbjct: 58936 aaagaaagaaaataaaatcag 58916
>dbj|BS000588.2| Pan troglodytes chromosome Y clone:PTB-443K18, complete sequence Length = 151892 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 392 tcactatcatcatcaccagca 412 ||||||||||||||||||||| Sbjct: 92739 tcactatcatcatcaccagca 92719
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 392 tcactatcatcatcaccagca 412 ||||||||||||||||||||| Sbjct: 17129174 tcactatcatcatcaccagca 17129194
>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 Length = 4170692 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 384 cctcatcttcactatcatcat 404 ||||||||||||||||||||| Sbjct: 319285 cctcatcttcactatcatcat 319265
>gb|AC060771.8| Homo sapiens chromosome 17, clone RP11-169I9, complete sequence Length = 138969 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 386 tcatcttcactatcatcatcaccagcaac 414 ||||| |||||||||||||||||| |||| Sbjct: 22301 tcatcatcactatcatcatcaccatcaac 22273 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 386 tcatcttcactatcatcatcacca 409 ||||| |||||||||||||||||| Sbjct: 22398 tcatcatcactatcatcatcacca 22375
>gb|AF004386.1|AF004386 Helobdella robusta homeodomain protein LOX6 (Lox6) mRNA, partial cds Length = 1205 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 386 tcatcttcactatcatcatca 406 ||||||||||||||||||||| Sbjct: 131 tcatcttcactatcatcatca 151
>emb|BX827490.1|CNS0A3OV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS62ZH03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1371 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 386 tcatcttcactatcatcatca 406 ||||||||||||||||||||| Sbjct: 501 tcatcttcactatcatcatca 481
>gb|AC146149.2| Pan troglodytes BAC clone RP43-37G13 from chromosome 7, complete sequence Length = 197136 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 386 tcatcttcactatcatcatcaccagcaac 414 ||||||||| |||||||||||||| |||| Sbjct: 77268 tcatcttcattatcatcatcaccatcaac 77296
>gb|AF309663.1|AF309663 Human respiratory syncytial virus isolate Moz/170/99 G-protein (G) gene, partial cds Length = 330 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 64 aaaactggaaagaaaaacacc 84 ||||||||||||||||||||| Sbjct: 4 aaaactggaaagaaaaacacc 24
>gb|AC016678.4|AC016678 Homo sapiens BAC clone RP11-55O11 from Y, complete sequence Length = 142982 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 392 tcactatcatcatcaccagca 412 ||||||||||||||||||||| Sbjct: 141145 tcactatcatcatcaccagca 141125
>emb|AL731764.11| Mouse DNA sequence from clone RP23-75F12 on chromosome X, complete sequence Length = 190219 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 153 cactccaaagaaagaaaataa 173 ||||||||||||||||||||| Sbjct: 24876 cactccaaagaaagaaaataa 24896
>dbj|AB094512.1| Pinctada fucata aspein mRNA for shell matrix protein, complete cds Length = 1909 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 389 tcttcactatcatcatcacca 409 ||||||||||||||||||||| Sbjct: 451 tcttcactatcatcatcacca 431
>gb|AC131101.3| Mus musculus BAC clone RP23-60O18 from 6, complete sequence Length = 182176 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 377 gtatcttcctcatcttcactatcatcatcacca 409 |||||||| ||||| ||||| |||||||||||| Sbjct: 88461 gtatcttcatcatcatcactgtcatcatcacca 88429
>gb|AC132952.3| Mus musculus BAC clone RP24-175H8 from 19, complete sequence Length = 177345 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 150 tttcactccaaagaaagaaaa 170 ||||||||||||||||||||| Sbjct: 50264 tttcactccaaagaaagaaaa 50244
>gb|AC117544.8| Mus musculus chromosome 8, clone RP23-99L5, complete sequence Length = 179585 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 386 tcatcttcactatcatcatca 406 ||||||||||||||||||||| Sbjct: 101572 tcatcttcactatcatcatca 101552
>emb|AL773582.6| Mouse DNA sequence from clone RP23-174J23 on chromosome 2, complete sequence Length = 206309 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 47 gtacaaagaacaccagcaaaa 67 ||||||||||||||||||||| Sbjct: 83540 gtacaaagaacaccagcaaaa 83520
>emb|AL772194.6| Mouse DNA sequence from clone RP23-331M18 on chromosome 4, complete sequence Length = 176496 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 161 agaaagaaaataaaatcaggt 181 ||||||||||||||||||||| Sbjct: 156924 agaaagaaaataaaatcaggt 156904
>gb|AC164983.2| Mus musculus BAC clone RP23-16J24 from chromosome 17, complete sequence Length = 224370 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 160 aagaaagaaaataaaatcagg 180 ||||||||||||||||||||| Sbjct: 121024 aagaaagaaaataaaatcagg 121044
>ref|NM_001035797.1| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/ zinc ion binding AT3G56580 transcript variant AT3G56580.3 mRNA, complete cds Length = 1369 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 cactatcatcatcaccagca 412 |||||||||||||||||||| Sbjct: 1047 cactatcatcatcaccagca 1066
>ref|NM_202719.1| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/ zinc ion binding AT3G56580 transcript variant AT3G56580.2 mRNA, complete cds Length = 1397 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 cactatcatcatcaccagca 412 |||||||||||||||||||| Sbjct: 1080 cactatcatcatcaccagca 1099
>ref|NM_115516.2| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/ zinc ion binding AT3G56580 transcript variant AT3G56580.1 mRNA, complete cds Length = 1527 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 cactatcatcatcaccagca 412 |||||||||||||||||||| Sbjct: 1206 cactatcatcatcaccagca 1225
>ref|XM_642188.1| Dictyostelium discoideum hypothetical protein (DDB0189517), partial mRNA Length = 1935 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 380 tcttcctcatcttcactatcatca 403 |||||||| ||||||||||||||| Sbjct: 452 tcttcctcttcttcactatcatca 429
>ref|XM_641492.1| Dictyostelium discoideum hypothetical protein (DDB0190846), partial mRNA Length = 2703 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 379 atcttcctcatcttcactatcatcatca 406 |||||||||||||||| |||||||||| Sbjct: 972 atcttcctcatcttcatcatcatcatca 945
>gb|DQ141112.1| Tribolium castaneum Dscam gene, partial sequence Length = 33843 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 gcaaaactggaaagaaaaac 81 |||||||||||||||||||| Sbjct: 26892 gcaaaactggaaagaaaaac 26873
>gb|AC147651.4| Homo sapiens BAC clone RP13-689E11 from 7, complete sequence Length = 162139 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 386 tcatcttcactatcatcatcacca 409 ||||| |||||||||||||||||| Sbjct: 94823 tcatcatcactatcatcatcacca 94846
>gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 1, complete sequence Length = 2300533 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 383 tcctcatcttcactatcatc 402 |||||||||||||||||||| Sbjct: 735506 tcctcatcttcactatcatc 735525
>ref|XM_458127.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0C11198g) partial mRNA Length = 1293 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 tcttcctcatcttcactatc 399 |||||||||||||||||||| Sbjct: 1127 tcttcctcatcttcactatc 1108
>gb|AC144673.3| Mus musculus BAC clone RP23-40K14 from chromosome 14, complete sequence Length = 162333 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 aaagaaagaaaataaaatca 178 |||||||||||||||||||| Sbjct: 58483 aaagaaagaaaataaaatca 58464
>ref|XM_707732.1| Candida albicans SC5314 hypothetical protein (CaO19.14156), mRNA Length = 702 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 391 ttcactatcatcatcaccagcaac 414 |||| ||||||||||||||||||| Sbjct: 422 ttcaatatcatcatcaccagcaac 445
>gb|AC073162.9| Homo sapiens chromosome 10 clone RP11-536J24, complete sequence Length = 185754 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 460 cttatcttccctctcactcacagc 483 ||||||||||||||||||| |||| Sbjct: 162436 cttatcttccctctcactcccagc 162413
>ref|NM_001040319.1| Danio rerio zgc:136242 (zgc:136242), mRNA Length = 1104 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 386 tcatcttcactatcatcatcacca 409 |||||||||| ||||||||||||| Sbjct: 783 tcatcttcaccatcatcatcacca 806
>gb|AY590469.1| Homo sapiens MCM3 minichromosome maintenance deficient 3 (S. cerevisiae) associated protein (MCM3AP) gene, complete cds Length = 54127 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 ttcaaagagcttttaaatag 265 |||||||||||||||||||| Sbjct: 46620 ttcaaagagcttttaaatag 46601
>gb|AC161042.4| Mus musculus chromosome 8, clone RP24-278L20, complete sequence Length = 174823 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 507 actttcctttgtgtttttca 526 |||||||||||||||||||| Sbjct: 71253 actttcctttgtgtttttca 71272
>gb|AY277971.1| Takifugu rubripes transcription factor Sox6a (Sox6a) gene, complete cds Length = 66784 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 ttcaaagagcttttaaatag 265 |||||||||||||||||||| Sbjct: 40887 ttcaaagagcttttaaatag 40868
>ref|XM_987979.1| PREDICTED: Mus musculus similar to IgE-binding protein (LOC667054), mRNA Length = 648 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 387 catcttcactatcatcatca 406 |||||||||||||||||||| Sbjct: 568 catcttcactatcatcatca 549
>gb|AC107850.11| Mus musculus chromosome 17, clone RP23-450G2, complete sequence Length = 216615 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 ttcactccaaagaaagaaaa 170 |||||||||||||||||||| Sbjct: 4 ttcactccaaagaaagaaaa 23
>emb|CT005231.3| Pan troglodytes chromosome X clone PTB-024D11 map Xq28, complete sequence Length = 179396 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 aaagaaagaaaataaaatca 178 |||||||||||||||||||| Sbjct: 91148 aaagaaagaaaataaaatca 91167
>emb|Z83235.1|CEK10C3 Caenorhabditis elegans Cosmid K10C3, complete sequence Length = 33782 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 387 catcttcactatcatcatca 406 |||||||||||||||||||| Sbjct: 19088 catcttcactatcatcatca 19107
>ref|XM_566689.1| Cryptococcus neoformans var. neoformans JEC21 heat shock protein (CNA02830) partial mRNA Length = 2857 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 383 tcctcatcttcactatcatc 402 |||||||||||||||||||| Sbjct: 2704 tcctcatcttcactatcatc 2685
>gb|AC124411.5| Mus musculus BAC clone RP24-267C20 from chromosome 13, complete sequence Length = 177414 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 cagcaaaactggaaagaaaa 79 |||||||||||||||||||| Sbjct: 65640 cagcaaaactggaaagaaaa 65659
>gb|AC013391.12| Homo sapiens chromosome 15, clone RP11-429B14, complete sequence Length = 210797 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 501 ctaccaactttcctttgtgttttt 524 ||||||||||||||| |||||||| Sbjct: 123076 ctaccaactttccttggtgttttt 123053
>ref|XM_648789.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (69.t00025) partial mRNA Length = 1599 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 386 tcatcttcactatcatcatcacca 409 ||||||||| |||||||||||||| Sbjct: 1487 tcatcttcagtatcatcatcacca 1464
>ref|XM_546979.2| PREDICTED: Canis familiaris similar to PDGFA associated protein 1 (LOC489861), mRNA Length = 1260 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 379 atcttcctcatcttcactatcatc 402 |||||||||||||||||| ||||| Sbjct: 263 atcttcctcatcttcactctcatc 240
>gb|AC134382.13| Mus musculus strain C57BL/6J clone rp23-167l1, complete sequence Length = 194086 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 386 tcatcttcactatcatcatcacca 409 |||||||||||||||||| ||||| Sbjct: 118006 tcatcttcactatcatcaccacca 117983
>gb|BC115047.1| Danio rerio cDNA clone MGC:136242 IMAGE:7256416, complete cds Length = 1104 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 386 tcatcttcactatcatcatcacca 409 |||||||||| ||||||||||||| Sbjct: 783 tcatcttcaccatcatcatcacca 806
>emb|AL583854.7| Human DNA sequence from clone RP11-570K4 on chromosome 6 Contains part of a novel gene, complete sequence Length = 135953 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 386 tcatcttcactatcatcatcacca 409 ||||||||||| |||||||||||| Sbjct: 26240 tcatcttcactgtcatcatcacca 26217
>emb|AL357147.12| Human DNA sequence from clone RP1-29M21 on chromosome 10, complete sequence Length = 34758 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 aaagaaagaaaataaaatca 178 |||||||||||||||||||| Sbjct: 2157 aaagaaagaaaataaaatca 2176
>emb|AL356220.12| Human DNA sequence from clone RP11-97H1 on chromosome 10 Contains part of the HPSE2 gene for heparanase 2, complete sequence Length = 139852 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 aaagaaagaaaataaaatca 178 |||||||||||||||||||| Sbjct: 11139 aaagaaagaaaataaaatca 11120
>emb|AL157700.13| Human DNA sequence from clone RP6-201G10 on chromosome Xq12-13.1 Contains the 3' end of the OPHN1 gene for oligophrenin 1, complete sequence Length = 190611 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 aaagaaagaaaataaaatca 178 |||||||||||||||||||| Sbjct: 122678 aaagaaagaaaataaaatca 122659
>emb|AL133456.1| Human DNA sequence from clone RP1-231P7P on chromosome 22q11.21-12.2 Contains a ca repeat polymorphism, an STS and GSSs, complete sequence Length = 80485 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 386 tcatcttcactatcatcatcacca 409 ||||| |||||||||||||||||| Sbjct: 23992 tcatcatcactatcatcatcacca 23969 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 386 tcatcttcactatcatcatcacca 409 ||||| |||||||||||||||||| Sbjct: 23965 tcatcatcactatcatcatcacca 23942
>emb|AL022334.1|HS569D19 Human DNA sequence from clone RP4-569D19 on chromosome 22q13.1, complete sequence Length = 114771 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 379 atcttcctcatcttcactatcatcatca 406 ||||||| |||| ||||||||||||||| Sbjct: 40172 atcttccccatcatcactatcatcatca 40145
>gb|AY096613.1| Arabidopsis thaliana unknown protein (At3g56580) mRNA, complete cds Length = 994 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 cactatcatcatcaccagca 412 |||||||||||||||||||| Sbjct: 865 cactatcatcatcaccagca 884
>gb|AY045983.1| Arabidopsis thaliana unknown protein (At3g56580) mRNA, complete cds Length = 1512 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 cactatcatcatcaccagca 412 |||||||||||||||||||| Sbjct: 1175 cactatcatcatcaccagca 1194
>emb|CR382135.1| Debaryomyces hansenii chromosome C of strain CBS767 of Debaryomyces hansenii Length = 1592360 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 tcttcctcatcttcactatc 399 |||||||||||||||||||| Sbjct: 923931 tcttcctcatcttcactatc 923950
>emb|AL163972.1|ATT5P19 Arabidopsis thaliana DNA chromosome 3, BAC clone T5P19 Length = 101539 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 cactatcatcatcaccagca 412 |||||||||||||||||||| Sbjct: 74221 cactatcatcatcaccagca 74240
>gb|AC171134.2| Helobdella robusta clone CH306-1A5, complete sequence Length = 95814 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 383 tcctcatcttcactatcatcatca 406 |||||||||||| ||||||||||| Sbjct: 43176 tcctcatcttcattatcatcatca 43199
>gb|AY138875.1| Crocodylus intermedius clone STAF3A.4 mitochondrial control region, partial sequence Length = 614 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 509 tttcctttgtgtttttcaat 528 |||||||||||||||||||| Sbjct: 146 tttcctttgtgtttttcaat 127
>emb|CR861262.1| Pongo pygmaeus mRNA; cDNA DKFZp459O163 (from clone DKFZp459O163) Length = 4242 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 gaaagaaaaacacctgttga 90 |||||||||||||||||||| Sbjct: 3849 gaaagaaaaacacctgttga 3868
>gb|AC126754.2| Homo sapiens chromosome 19 clone P1-103340, complete sequence Length = 26947 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 386 tcatcttcactatcatcatcacca 409 ||||||||| |||||||||||||| Sbjct: 26551 tcatcttcattatcatcatcacca 26528
>gb|AC112502.7| Homo sapiens 3 BAC RP11-880C10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 104564 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 tccaaagaaagaaaataaaa 175 |||||||||||||||||||| Sbjct: 49227 tccaaagaaagaaaataaaa 49208
>emb|AL833644.1|HSM804957 Homo sapiens mRNA; cDNA DKFZp686P0879 (from clone DKFZp686P0879) Length = 1969 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 501 ctaccaactttcctttgtgttttt 524 ||||||||||||||| |||||||| Sbjct: 1126 ctaccaactttccttggtgttttt 1149
>emb|AL832480.1|HSM803788 Homo sapiens mRNA; cDNA DKFZp686H0819 (from clone DKFZp686H0819) Length = 2128 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 agcaaaactggaaagaaaaa 80 |||||||||||||||||||| Sbjct: 1522 agcaaaactggaaagaaaaa 1503
>dbj|AK123554.1| Homo sapiens cDNA FLJ41560 fis, clone CTONG1000088 Length = 3727 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 agcaaaactggaaagaaaaa 80 |||||||||||||||||||| Sbjct: 2268 agcaaaactggaaagaaaaa 2249
>emb|CR597075.1| full-length cDNA clone CS0DF037YI18 of Fetal brain of Homo sapiens (human) Length = 1722 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 gaaagaaaaacacctgttga 90 |||||||||||||||||||| Sbjct: 1350 gaaagaaaaacacctgttga 1369
>gb|AC104376.6| Homo sapiens chromosome 8, clone CTD-2242O8, complete sequence Length = 203348 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 463 atcttccctctcactcacag 482 |||||||||||||||||||| Sbjct: 190402 atcttccctctcactcacag 190383
>gb|AC069227.24| Homo sapiens 12 BAC RP11-478G16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 167398 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 462 tatcttccctctcactcaca 481 |||||||||||||||||||| Sbjct: 124903 tatcttccctctcactcaca 124922
>gb|AC091551.14| Homo sapiens chromosome 18, clone RP11-729G3, complete sequence Length = 156211 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 381 cttcctcatcttcactatca 400 |||||||||||||||||||| Sbjct: 105685 cttcctcatcttcactatca 105704
>gb|AC009093.10| Homo sapiens chromosome 16 clone RP11-426C22, complete sequence Length = 207997 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 agcaaaactggaaagaaaaa 80 |||||||||||||||||||| Sbjct: 149850 agcaaaactggaaagaaaaa 149869
>dbj|AK139060.1| Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:A730010G10 product:dachshund 1 (Drosophila), full insert sequence Length = 4396 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 aaagaaagaaaataaaatca 178 |||||||||||||||||||| Sbjct: 4353 aaagaaagaaaataaaatca 4334
>gb|AF404777.1| Homo sapiens phenylalanine hydroxylase (PAH) gene, complete cds Length = 171266 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 462 tatcttccctctcactcaca 481 |||||||||||||||||||| Sbjct: 128772 tatcttccctctcactcaca 128791
>gb|AC007497.6| Homo sapiens chromosome 16 clone RP11-36I17, complete sequence Length = 164269 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 aaagaaaataaaatcaggtg 182 |||||||||||||||||||| Sbjct: 65319 aaagaaaataaaatcaggtg 65338
>gb|AC005302.70| Mus musculus strain 129S6/SvEvTac chromosome 10 clone rp21-481n4, complete sequence Length = 204653 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 386 tcatcttcactatcatcatcacca 409 |||||||||||||||||| ||||| Sbjct: 80660 tcatcttcactatcatcaccacca 80683
>gb|AC015967.8| Homo sapiens chromosome 18, clone RP11-294N21, complete sequence Length = 186726 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 gaaagaaaaacacctgttga 90 |||||||||||||||||||| Sbjct: 54446 gaaagaaaaacacctgttga 54427
>gb|AC068513.8| Homo sapiens chromosome 18, clone RP11-659L20, complete sequence Length = 153873 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 gaaagaaaaacacctgttga 90 |||||||||||||||||||| Sbjct: 70035 gaaagaaaaacacctgttga 70016
>gb|AC090539.6| Homo sapiens chromosome 8, clone RP11-759A9, complete sequence Length = 171690 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 463 atcttccctctcactcacag 482 |||||||||||||||||||| Sbjct: 168484 atcttccctctcactcacag 168503
>gb|AC102433.8| Mus musculus chromosome 8, clone RP24-119F15, complete sequence Length = 157000 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 507 actttcctttgtgtttttca 526 |||||||||||||||||||| Sbjct: 51098 actttcctttgtgtttttca 51079
>gb|AC011811.42| Homo sapiens clone b250a12, complete sequence Length = 231739 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 386 tcatcttcactatcatcatcacca 409 ||||| |||||||||||||||||| Sbjct: 184621 tcatcatcactatcatcatcacca 184598
>ref|NM_075901.1| Caenorhabditis elegans ZK380.2 (ZK380.2) mRNA, complete cds Length = 1488 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 atcttcactatcatcatcac 407 |||||||||||||||||||| Sbjct: 501 atcttcactatcatcatcac 482
>ref|NM_060209.1| Caenorhabditis elegans K10C3.4 (K10C3.4) mRNA, complete cds Length = 1113 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 387 catcttcactatcatcatca 406 |||||||||||||||||||| Sbjct: 940 catcttcactatcatcatca 959
>gb|DQ059114.1| Arabidopsis thaliana RING finger family protein (At3g56575) mRNA, complete cds Length = 963 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 cactatcatcatcaccagca 412 |||||||||||||||||||| Sbjct: 865 cactatcatcatcaccagca 884
>gb|AC117500.13| Homo sapiens 12 BAC RP11-495K9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 180995 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 386 tcatcttcactatcatcatcacca 409 ||||| |||||||||||||||||| Sbjct: 127545 tcatcatcactatcatcatcacca 127568
>gb|AC140847.4| Homo sapiens 12 BAC RP11-313F23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 134878 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 386 tcatcttcactatcatcatcacca 409 ||||| |||||||||||||||||| Sbjct: 11354 tcatcatcactatcatcatcacca 11331
>gb|AC138512.4| Homo sapiens chromosome 16 clone RP11-93B18, complete sequence Length = 159064 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 agcaaaactggaaagaaaaa 80 |||||||||||||||||||| Sbjct: 104170 agcaaaactggaaagaaaaa 104151
>gb|AC092850.13| Homo sapiens 12 BAC RP11-346B9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 176733 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 386 tcatcttcactatcatcatcacca 409 ||||| |||||||||||||||||| Sbjct: 122014 tcatcatcactatcatcatcacca 122037
>gb|AC154183.2| Mus musculus BAC clone RP23-474E16 from chromosome 17, complete sequence Length = 181773 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 454 caatagcttatcttccctct 473 |||||||||||||||||||| Sbjct: 51585 caatagcttatcttccctct 51604
>gb|AC079676.4|AC079676 Arabidopsis thaliana chromosome 1 BAC F6D5 genomic sequence, complete sequence Length = 29508 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 ttataacaacaaaactattt 151 |||||||||||||||||||| Sbjct: 14695 ttataacaacaaaactattt 14714
>gb|AC068999.15|AC068999 Homo sapiens chromosome 18 clone RP11-70G19, complete sequence Length = 194813 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 aaagaaagaaaataaaatca 178 |||||||||||||||||||| Sbjct: 98414 aaagaaagaaaataaaatca 98395
>gb|AC134312.3| Homo sapiens chromosome 16 clone RP11-863P13, complete sequence Length = 205610 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 agcaaaactggaaagaaaaa 80 |||||||||||||||||||| Sbjct: 186484 agcaaaactggaaagaaaaa 186503
>gb|AC087349.17| Homo sapiens chromosome 8, clone RP11-339A23, complete sequence Length = 96337 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 501 ctaccaactttcctttgtgttttt 524 ||||||||||||||| |||||||| Sbjct: 53338 ctaccaactttccttggtgttttt 53315
>gb|AC011815.7|AC011815 Homo sapiens chromosome , clone RP11-158H5, complete sequence Length = 156244 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 gaaagaaaaacacctgttga 90 |||||||||||||||||||| Sbjct: 3967 gaaagaaaaacacctgttga 3986
>gb|AF263283.1|AF263283 Filobasidiella neoformans var. neoformans clone CRYP02, complete sequence Length = 93593 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 383 tcctcatcttcactatcatc 402 |||||||||||||||||||| Sbjct: 82018 tcctcatcttcactatcatc 82037
>gb|AC068564.1|AC068564 Filobasidiella neoformans, complete sequence Length = 93979 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 383 tcctcatcttcactatcatc 402 |||||||||||||||||||| Sbjct: 82189 tcctcatcttcactatcatc 82208
>dbj|AB073701.1| Borrelia duttonii plasmid DNA, complete sequence, strain:Ly Length = 44010 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 386 tcatcttcactatcatcatcacca 409 ||||| |||||||||||||||||| Sbjct: 11590 tcatcatcactatcatcatcacca 11613 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 386 tcatcttcactatcatcatcacca 409 ||||| |||||||||||||||||| Sbjct: 6880 tcatcatcactatcatcatcacca 6903 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 386 tcatcttcactatcatcatcacca 409 ||||| |||||||||||||||||| Sbjct: 1540 tcatcatcactatcatcatcacca 1563
>dbj|BS000242.1| Pan troglodytes chromosome 22 clone:PTB-120M01, map 22, complete sequences Length = 224098 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 ttcaaagagcttttaaatag 265 |||||||||||||||||||| Sbjct: 95234 ttcaaagagcttttaaatag 95253
>emb|BX908393.10| Zebrafish DNA sequence from clone CH211-180H19 in linkage group 18, complete sequence Length = 138757 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 187 tcaatcaaagtaaagcccagcact 210 |||| ||||||||||||||||||| Sbjct: 604 tcaaacaaagtaaagcccagcact 627
>emb|BX649347.3| Zebrafish DNA sequence from clone DKEY-14K9 in linkage group 4, complete sequence Length = 110100 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 386 tcatcttcactatcatcatcacca 409 |||||||||| ||||||||||||| Sbjct: 42612 tcatcttcaccatcatcatcacca 42589
>emb|CT025579.12| Mouse DNA sequence from clone RP24-189A10 on chromosome 14, complete sequence Length = 173961 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 387 catcttcactatcatcatca 406 |||||||||||||||||||| Sbjct: 34096 catcttcactatcatcatca 34115
>gb|AF126285.1|AF126285 Pleurotus ostreatus linear mitochondrial plasmid mlp1, complete sequence Length = 9879 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 atcttcactatcatcatcac 407 |||||||||||||||||||| Sbjct: 9478 atcttcactatcatcatcac 9497
>gb|AF089085.1|AF089085 Arabidopsis thaliana putative auxin efflux carrier protein (PIN1) gene, complete cds Length = 2803 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 ttataacaacaaaactattt 151 |||||||||||||||||||| Sbjct: 2365 ttataacaacaaaactattt 2346
>dbj|AP001759.1| Homo sapiens genomic DNA, chromosome 21q, section 103/105 Length = 340000 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 ttcaaagagcttttaaatag 265 |||||||||||||||||||| Sbjct: 258379 ttcaaagagcttttaaatag 258398
>dbj|AP006220.1| Homo sapiens genomic DNA, chromosome 18, clone:RP11-791E5, complete sequence Length = 118000 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 aaagaaagaaaataaaatca 178 |||||||||||||||||||| Sbjct: 57207 aaagaaagaaaataaaatca 57188
>dbj|AP002364.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-121L10, complete sequence Length = 165703 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 493 ttctttcactaccaactttccttt 516 |||||||||||||||| ||||||| Sbjct: 71835 ttctttcactaccaaccttccttt 71858
>ref|NM_001030141.1| Danio rerio si:dkey-14k9.2 (si:dkey-14k9.2), mRNA Length = 776 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 386 tcatcttcactatcatcatcacca 409 |||||||||| ||||||||||||| Sbjct: 674 tcatcttcaccatcatcatcacca 697
>emb|AL772305.15| Mouse DNA sequence from clone RP23-86E8 on chromosome 4, complete sequence Length = 260935 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 483 ctctaggtgcttctttcactacca 506 ||||||||||| |||||||||||| Sbjct: 92597 ctctaggtgctgctttcactacca 92620
>gb|AC135083.4| Mus musculus BAC clone RP24-238A21 from 14, complete sequence Length = 179469 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 cagcaaaactggaaagaaaa 79 |||||||||||||||||||| Sbjct: 144031 cagcaaaactggaaagaaaa 144012
>emb|CT030230.13| Mouse DNA sequence from clone RP23-392N1 on chromosome 17, complete sequence Length = 162981 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 ttcactccaaagaaagaaaa 170 |||||||||||||||||||| Sbjct: 15104 ttcactccaaagaaagaaaa 15085
>gb|AC146617.3| Mus musculus BAC clone RP23-14M15 from 14, complete sequence Length = 221015 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 cagcaaaactggaaagaaaa 79 |||||||||||||||||||| Sbjct: 114272 cagcaaaactggaaagaaaa 114253
>emb|CR956648.9| Pig DNA sequence from clone CH242-155F23 on chromosome 17, complete sequence Length = 168798 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 386 tcatcttcactatcatcatcacca 409 ||||| |||||||||||||||||| Sbjct: 113240 tcatcatcactatcatcatcacca 113217 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 386 tcatcttcactatcatcatcacca 409 ||||| |||||||||||||||||| Sbjct: 113147 tcatcatcactatcatcatcacca 113124 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 386 tcatcttcactatcatcatcacca 409 ||||| |||||||||||||||||| Sbjct: 113051 tcatcatcactatcatcatcacca 113028 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 386 tcatcttcactatcatcatcacca 409 ||||| |||||||||||||||||| Sbjct: 112958 tcatcatcactatcatcatcacca 112935
>emb|AL935318.6| Zebrafish DNA sequence from clone CH211-251L7 in linkage group 18, complete sequence Length = 176719 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 187 tcaatcaaagtaaagcccagcact 210 |||| ||||||||||||||||||| Sbjct: 117722 tcaaacaaagtaaagcccagcact 117699
>emb|AL626774.23| Mouse DNA sequence from clone RP23-198O15 on chromosome 4, complete sequence Length = 181545 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 cttgtttataacaacaaaac 146 |||||||||||||||||||| Sbjct: 20613 cttgtttataacaacaaaac 20594
>emb|AL096757.1|HSJ231P7P Human DNA sequence from clone 231P7p on chromosome 22q11.21-12.2 Contains CA repeat and STS, complete sequence Length = 80485 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 386 tcatcttcactatcatcatcacca 409 ||||| |||||||||||||||||| Sbjct: 23992 tcatcatcactatcatcatcacca 23969 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 386 tcatcttcactatcatcatcacca 409 ||||| |||||||||||||||||| Sbjct: 23965 tcatcatcactatcatcatcacca 23942
>emb|AL772278.7| Mouse DNA sequence from clone RP23-416G5 on chromosome 4, complete sequence Length = 199565 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 agaaagaaaataaaatcagg 180 |||||||||||||||||||| Sbjct: 42742 agaaagaaaataaaatcagg 42723
>emb|AL805933.7| Mouse DNA sequence from clone RP23-31P9 on chromosome X, complete sequence Length = 209410 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 155 ctccaaagaaagaaaataaa 174 |||||||||||||||||||| Sbjct: 8118 ctccaaagaaagaaaataaa 8137
>gb|AC122127.31| Mus musculus chromosome 1, clone RP24-401K1, complete sequence Length = 193324 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 378 tatcttcctcatcttcactatcatcatcacca 409 ||||||||||||| |||| || |||||||||| Sbjct: 96113 tatcttcctcatcatcaccattatcatcacca 96144
>gb|AC034198.7| Homo sapiens chromosome 3 clone RP11-767C1 map 3p, complete sequence Length = 169005 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 aaagaaagaaaataaaatca 178 |||||||||||||||||||| Sbjct: 147936 aaagaaagaaaataaaatca 147917
>dbj|AP001469.1| Homo sapiens genomic DNA, chromosome 21q22.3, clone:B178H12, telomere region, complete sequence Length = 47859 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 ttcaaagagcttttaaatag 265 |||||||||||||||||||| Sbjct: 19329 ttcaaagagcttttaaatag 19348
>dbj|AB043547.1| Homo sapiens gene for SMAD4, partial cds Length = 160820 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 381 cttcctcatcttcactatca 400 |||||||||||||||||||| Sbjct: 146928 cttcctcatcttcactatca 146947 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9,417,029 Number of Sequences: 3902068 Number of extensions: 9417029 Number of successful extensions: 192634 Number of sequences better than 10.0: 177 Number of HSP's better than 10.0 without gapping: 177 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 191729 Number of HSP's gapped (non-prelim): 904 length of query: 639 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 616 effective length of database: 17,143,297,704 effective search space: 10560271385664 effective search space used: 10560271385664 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
