ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal4f08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY105872.1| Zea mays PCO079046 mRNA sequence 285 1e-73
2dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 174 3e-40
3gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 174 3e-40
4emb|AL713927.3|CNS07YP4 Oryza sativa chromosome 12, . BAC OSJNBa... 174 3e-40
5gb|BT017471.1| Zea mays clone EL01N0408D01.c mRNA sequence 161 4e-36
6dbj|AK101913.1| Oryza sativa (japonica cultivar-group) cDNA clon... 137 6e-29
7gb|AC137759.4| Oryza sativa (japonica cultivar-group) chromosome... 119 1e-23
8dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 119 1e-23
9gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 119 1e-23
10dbj|AK109114.1| Oryza sativa (japonica cultivar-group) cDNA clon... 105 2e-19
11gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 94 8e-16
12dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 94 8e-16
13gb|AC134231.2| Oryza sativa (japonica cultivar-group) chromosome... 94 8e-16
14gb|BT017750.1| Zea mays clone EL01N0450B09.c mRNA sequence 72 3e-09
15gb|AY108458.1| Zea mays PCO137991 mRNA sequence 68 4e-08
16ref|NM_121320.2| Arabidopsis thaliana unknown protein AT5G13170 ... 64 7e-07
17gb|AY113934.1| Arabidopsis thaliana putative senescence-associat... 64 7e-07
18gb|AY045949.1| Arabidopsis thaliana putative senescence-associat... 64 7e-07
19emb|AL391711.1|ATT19L5 Arabidopsis thaliana DNA chromosome 5, BA... 64 7e-07
20emb|BX829518.1|CNS0A267 Arabidopsis thaliana Full-length cDNA Co... 64 7e-07
21emb|BX830132.1|CNS0A181 Arabidopsis thaliana Full-length cDNA Co... 64 7e-07
22gb|AY087836.1| Arabidopsis thaliana clone 38843 mRNA, complete s... 64 7e-07
23dbj|AB011442.1| Triticum aestivum WESR1 mRNA, partial sequence 62 3e-06
24gb|AC108759.2| Oryza sativa (Japonica cultiva-group) chromosome ... 58 4e-05
25dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 58 4e-05
26gb|AY105503.1| Zea mays PCO075069 mRNA sequence 58 4e-05
27ref|NM_113718.2| Arabidopsis thaliana unknown protein AT3G28007 ... 56 2e-04
28gb|AF428275.1|AF428275 Arabidopsis thaliana unknown protein mRNA... 56 2e-04
29gb|AY086230.1| Arabidopsis thaliana clone 22745 mRNA, complete s... 56 2e-04
30dbj|AK118293.1| Arabidopsis thaliana At3g28007 mRNA for unknown ... 56 2e-04
31dbj|AB028616.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 56 2e-04
32gb|BT002215.1| Arabidopsis thaliana At3g28008/At3g28008 mRNA, co... 56 2e-04
33gb|AC121491.2| Oryza sativa (japonica cultivar-group) chromosome... 54 7e-04
34emb|BX822431.1|CNS0A77F Arabidopsis thaliana Full-length cDNA Co... 52 0.003
35gb|BT018599.1| Zea mays clone EL01N0449A02.d mRNA sequence 50 0.010
36gb|BT013320.1| Lycopersicon esculentum clone 135010F, mRNA sequence 50 0.010
37dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.010
38dbj|AP004361.4| Oryza sativa (japonica cultivar-group) genomic D... 50 0.010
39dbj|AK104255.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.010
40dbj|AK104143.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.010
41dbj|AK066226.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.010
42ref|XM_465955.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.041
43gb|AC135419.2| Oryza sativa (japonica cultivar-group) chromosome... 48 0.041
44dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.041
45gb|AC115109.2| Homo sapiens BAC clone RP11-78I10 from 2, complet... 48 0.041
46dbj|AK103266.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.041
47dbj|AK063475.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.041
48gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple... 46 0.16
49emb|CT030247.6| Mouse DNA sequence from clone RP23-340G24 on chr... 46 0.16
50gb|AC109170.10| Mus musculus chromosome 8, clone RP23-87B3, comp... 44 0.65
51gb|AC123794.4| Mus musculus BAC clone RP24-315P14 from chromosom... 44 0.65
52emb|BX005072.20| Human DNA sequence from clone XXyac-59F3 on chr... 44 0.65
53emb|AL450334.15| Human DNA sequence from clone RP11-556L1 on chr... 44 0.65
54gb|AC013284.9| Homo sapiens chromosome 10 clone RP11-13E1, compl... 44 0.65
55gb|AC026739.7| Homo sapiens chromosome 5 clone CTD-2580L4, compl... 44 0.65
56ref|NM_101374.2| Arabidopsis thaliana unknown protein AT1G15040 ... 42 2.6
57ref|XM_465111.1| Oryza sativa (japonica cultivar-group), mRNA 42 2.6
58ref|XM_507468.1| PREDICTED Oryza sativa (japonica cultivar-group... 42 2.6
59ref|XM_507467.1| PREDICTED Oryza sativa (japonica cultivar-group... 42 2.6
60ref|XM_506777.2| PREDICTED Oryza sativa (japonica cultivar-group... 42 2.6
61ref|NM_192689.1| Oryza sativa (japonica cultivar-group), predic... 42 2.6
62gb|AE014843.1| Plasmodium falciparum 3D7 chromosome 11 section 8... 42 2.6
63emb|AL590995.14| Human DNA sequence from clone RP11-475B22 on ch... 42 2.6
64emb|AL590673.6| Human DNA sequence from clone RP11-202K9 on chro... 42 2.6
65gb|AF332456.1| Arabidopsis thaliana clone C00162 (e) unknown pro... 42 2.6
66dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.6
67emb|BX817147.1|CNS0AD8C Arabidopsis thaliana Full-length cDNA Co... 42 2.6
68dbj|AB205497.1| Uncultured bacterium gene for putative aminotran... 42 2.6
69gb|AC012189.3|T15D22 Arabidopsis thaliana chromosome 1 BAC T15D2... 42 2.6
70ref|NM_214275.1| Sus scrofa formiminotransferase-cyclodeaminase ... 42 2.6
71dbj|AP003303.4| Oryza sativa (japonica cultivar-group) genomic D... 42 2.6
72dbj|AP005532.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.6
73dbj|AK104467.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.6
74dbj|AK104411.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.6
75dbj|AK100174.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.6
76dbj|AK071676.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.6
77gb|L16507.1|PIGFORM Sus scrofa formiminotransferase-cyclodeamina... 42 2.6 
>gb|AY105872.1| Zea mays PCO079046 mRNA sequence
          Length = 1346

 Score =  285 bits (144), Expect = 1e-73
 Identities = 228/256 (89%)
 Strand = Plus / Minus

                                                                       
Query: 374 ccaccggcgtcgcgttcatgtagaacatgtagaggaccatctggatcatcccgaaggtga 433
           |||||||||||  |||||||||||||| |||||| |||||||||| ||  |||||| |||
Sbjct: 902 ccaccggcgtcttgttcatgtagaacacgtagagcaccatctggaccacgccgaagatga 843

                                                                       
Query: 434 agccaaggatgtttgggagcgcgacgtatttgtccttgatgagcaggccgtagaggaacc 493
           | || |||| |||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 842 accccaggacgtttggaagcgcgacgtatttgtccttgatgaggaggccgtagaggaacc 783

                                                                       
Query: 494 agacgatggcgctgagggtgagcgtgagggagagggagaagggcatgtactccacactct 553
           |||||| ||||||||||||||||| ||||||||||||||||||||||||||| || ||||
Sbjct: 782 agacgacggcgctgagggtgagcgagagggagagggagaagggcatgtactctacgctct 723

                                                                       
Query: 554 tggtcttgatcacacgaccgatgatgctgagaggcgcgacgaagacgcacacggagaagc 613
           | |||| |||||| || |  |||||||| || |||||||||||||| |  ||||||||||
Sbjct: 722 tcgtctggatcacgcgcctcatgatgcttagtggcgcgacgaagacactgacggagaagc 663

                           
Query: 614 cgacgcagatccagcc 629
           ||||||||||||||||
Sbjct: 662 cgacgcagatccagcc 647
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  174 bits (88), Expect = 3e-40
 Identities = 94/96 (97%)
 Strand = Plus / Plus

                                                                            
Query: 453      cgcgacgtatttgtccttgatgagcaggccgtagaggaaccagacgatggcgctgagggt 512
                |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||
Sbjct: 17344003 cgcgacgtatttgtccttgatgagaaggccgtagaggaaccagacgacggcgctgagggt 17344062

                                                    
Query: 513      gagcgtgagggagagggagaagggcatgtactccac 548
                ||||||||||||||||||||||||||||||||||||
Sbjct: 17344063 gagcgtgagggagagggagaagggcatgtactccac 17344098



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 66/73 (90%)
 Strand = Plus / Plus

                                                                            
Query: 572      cgatgatgctgagaggcgcgacgaagacgcacacggagaagccgacgcagatccagccga 631
                ||||||||||||| |||||||| |||||||  ||||||||| ||||||||| ||||||||
Sbjct: 17344251 cgatgatgctgagcggcgcgacaaagacgctgacggagaaggcgacgcagacccagccga 17344310

                             
Query: 632      gtgagacgacgcg 644
                | |||||||||||
Sbjct: 17344311 gggagacgacgcg 17344323



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 65/73 (89%)
 Strand = Plus / Plus

                                                                            
Query: 374      ccaccggcgtcgcgttcatgtagaacatgtagaggaccatctggatcatcccgaaggtga 433
                ||||||||||||||||||||||||||| ||||||  ||||||||| ||  ||||| ||||
Sbjct: 17343809 ccaccggcgtcgcgttcatgtagaacacgtagagccccatctggaccacaccgaatgtga 17343868

                             
Query: 434      agccaaggatgtt 446
                |||| ||||||||
Sbjct: 17343869 agcccaggatgtt 17343881
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  174 bits (88), Expect = 3e-40
 Identities = 94/96 (97%)
 Strand = Plus / Plus

                                                                            
Query: 453      cgcgacgtatttgtccttgatgagcaggccgtagaggaaccagacgatggcgctgagggt 512
                |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||
Sbjct: 17298374 cgcgacgtatttgtccttgatgagaaggccgtagaggaaccagacgacggcgctgagggt 17298433

                                                    
Query: 513      gagcgtgagggagagggagaagggcatgtactccac 548
                ||||||||||||||||||||||||||||||||||||
Sbjct: 17298434 gagcgtgagggagagggagaagggcatgtactccac 17298469



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 66/73 (90%)
 Strand = Plus / Plus

                                                                            
Query: 572      cgatgatgctgagaggcgcgacgaagacgcacacggagaagccgacgcagatccagccga 631
                ||||||||||||| |||||||| |||||||  ||||||||| ||||||||| ||||||||
Sbjct: 17298622 cgatgatgctgagcggcgcgacaaagacgctgacggagaaggcgacgcagacccagccga 17298681

                             
Query: 632      gtgagacgacgcg 644
                | |||||||||||
Sbjct: 17298682 gggagacgacgcg 17298694



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 65/73 (89%)
 Strand = Plus / Plus

                                                                            
Query: 374      ccaccggcgtcgcgttcatgtagaacatgtagaggaccatctggatcatcccgaaggtga 433
                ||||||||||||||||||||||||||| ||||||  ||||||||| ||  ||||| ||||
Sbjct: 17298180 ccaccggcgtcgcgttcatgtagaacacgtagagccccatctggaccacaccgaatgtga 17298239

                             
Query: 434      agccaaggatgtt 446
                |||| ||||||||
Sbjct: 17298240 agcccaggatgtt 17298252
to top
>emb|AL713927.3|CNS07YP4 Oryza sativa chromosome 12, . BAC OSJNBa0021B03 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 154826

 Score =  174 bits (88), Expect = 3e-40
 Identities = 94/96 (97%)
 Strand = Plus / Minus

                                                                         
Query: 453   cgcgacgtatttgtccttgatgagcaggccgtagaggaaccagacgatggcgctgagggt 512
             |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||
Sbjct: 59366 cgcgacgtatttgtccttgatgagaaggccgtagaggaaccagacgacggcgctgagggt 59307

                                                 
Query: 513   gagcgtgagggagagggagaagggcatgtactccac 548
             ||||||||||||||||||||||||||||||||||||
Sbjct: 59306 gagcgtgagggagagggagaagggcatgtactccac 59271



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 66/73 (90%)
 Strand = Plus / Minus

                                                                         
Query: 572   cgatgatgctgagaggcgcgacgaagacgcacacggagaagccgacgcagatccagccga 631
             ||||||||||||| |||||||| |||||||  ||||||||| ||||||||| ||||||||
Sbjct: 59118 cgatgatgctgagcggcgcgacaaagacgctgacggagaaggcgacgcagacccagccga 59059

                          
Query: 632   gtgagacgacgcg 644
             | |||||||||||
Sbjct: 59058 gggagacgacgcg 59046



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 65/73 (89%)
 Strand = Plus / Minus

                                                                         
Query: 374   ccaccggcgtcgcgttcatgtagaacatgtagaggaccatctggatcatcccgaaggtga 433
             ||||||||||||||||||||||||||| ||||||  ||||||||| ||  ||||| ||||
Sbjct: 59560 ccaccggcgtcgcgttcatgtagaacacgtagagccccatctggaccacaccgaatgtga 59501

                          
Query: 434   agccaaggatgtt 446
             |||| ||||||||
Sbjct: 59500 agcccaggatgtt 59488
to top
>gb|BT017471.1| Zea mays clone EL01N0408D01.c mRNA sequence
          Length = 1159

 Score =  161 bits (81), Expect = 4e-36
 Identities = 114/125 (91%)
 Strand = Plus / Minus

                                                                       
Query: 424 ccgaaggtgaagccaaggatgtttgggagcgcgacgtatttgtccttgatgagcaggccg 483
           |||||||||||||| || | |||||| || ||||||||||||||||||||||||||||||
Sbjct: 487 ccgaaggtgaagccgagcacgtttggcagggcgacgtatttgtccttgatgagcaggccg 428

                                                                       
Query: 484 tagaggaaccagacgatggcgctgagggtgagcgtgagggagagggagaagggcatgtac 543
           |||||||||||||||| |||||||  |||||||| || ||||||||||||||||||| ||
Sbjct: 427 tagaggaaccagacgacggcgctggcggtgagcgagaaggagagggagaagggcatgaac 368

                
Query: 544 tccac 548
           |||||
Sbjct: 367 tccac 363



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 55/60 (91%)
 Strand = Plus / Minus

                                                                       
Query: 573 gatgatgctgagaggcgcgacgaagacgcacacggagaagccgacgcagatccagccgag 632
           |||||||||||| ||||||||||||||||  ||||||||| ||||||||| |||||||||
Sbjct: 338 gatgatgctgagcggcgcgacgaagacgctgacggagaaggcgacgcagacccagccgag 279
to top
>dbj|AK101913.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033071H09, full
           insert sequence
          Length = 1494

 Score =  137 bits (69), Expect = 6e-29
 Identities = 177/213 (83%)
 Strand = Plus / Minus

                                                                       
Query: 410 ccatctggatcatcccgaaggtgaagccaaggatgtttgggagcgcgacgtatttgtcct 469
           |||||||||| |  ||||||| |||||| || | ||| || || ||||| ||||||||||
Sbjct: 854 ccatctggatgacgccgaaggagaagcccagcacgttgggaagagcgacatatttgtcct 795

                                                                       
Query: 470 tgatgagcaggccgtagaggaaccagacgatggcgctgagggtgagcgtgagggagaggg 529
           ||||||| |||||||||||||||||||||| |||||||| |||||| | || |||||| |
Sbjct: 794 tgatgaggaggccgtagaggaaccagacgacggcgctgatggtgagggagaaggagagcg 735

                                                                       
Query: 530 agaagggcatgtactccacactcttggtcttgatcacacgaccgatgatgctgagaggcg 589
           |||| |||||| ||||||| ||||||||    | |||  | | ||||||||| || || |
Sbjct: 734 agaacggcatgaactccacgctcttggtgcgcaccaccagcctgatgatgctaagggggg 675

                                            
Query: 590 cgacgaagacgcacacggagaagccgacgcaga 622
           ||||||||||||  ||||||||||| |||||||
Sbjct: 674 cgacgaagacgctgacggagaagccaacgcaga 642



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                       
Query: 666 gagggtgaggacgaaaatgagcccgaagccggcgatgttgangaggaggacgatcttggc 725
           ||||||||||| ||  ||||| |||||| || ||| ||||| |||||||| || ||||||
Sbjct: 598 gagggtgaggaggaggatgaggccgaagacgccgacgttgacgaggaggaggagcttggc 539

                      
Query: 726 tgtgaaaatct 736
            ||||| ||||
Sbjct: 538 ggtgaacatct 528
to top
>gb|AC137759.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0008H02, complete sequence
          Length = 143438

 Score =  119 bits (60), Expect = 1e-23
 Identities = 93/104 (89%)
 Strand = Plus / Plus

                                                                         
Query: 454   gcgacgtatttgtccttgatgagcaggccgtagaggaaccagacgatggcgctgagggtg 513
             ||||| ||||||||||||||||| |||||||||||||||||||||| |||||||| ||||
Sbjct: 81975 gcgacatatttgtccttgatgaggaggccgtagaggaaccagacgacggcgctgatggtg 82034

                                                         
Query: 514   agcgtgagggagagggagaagggcatgtactccacactcttggt 557
             || | || |||||| ||||| |||||| ||||||| ||||||||
Sbjct: 82035 agggagaaggagagcgagaacggcatgaactccacgctcttggt 82078



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                                
Query: 572   cgatgatgctgagaggcgcgacgaagacgcacacggagaagccgacgcaga 622
             |||||||||| || || |||||||||||||  ||||||||||| |||||||
Sbjct: 82192 cgatgatgctaaggggggcgacgaagacgctgacggagaagccaacgcaga 82242



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 59/71 (83%)
 Strand = Plus / Plus

                                                                         
Query: 666   gagggtgaggacgaaaatgagcccgaagccggcgatgttgangaggaggacgatcttggc 725
             ||||||||||| ||  ||||| |||||| || ||| ||||| |||||||| || ||||||
Sbjct: 82286 gagggtgaggaggaggatgaggccgaagacgccgacgttgacgaggaggaggagcttggc 82345

                        
Query: 726   tgtgaaaatct 736
              ||||| ||||
Sbjct: 82346 ggtgaacatct 82356
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  119 bits (60), Expect = 1e-23
 Identities = 93/104 (89%)
 Strand = Plus / Plus

                                                                            
Query: 454      gcgacgtatttgtccttgatgagcaggccgtagaggaaccagacgatggcgctgagggtg 513
                ||||| ||||||||||||||||| |||||||||||||||||||||| |||||||| ||||
Sbjct: 17574164 gcgacatatttgtccttgatgaggaggccgtagaggaaccagacgacggcgctgatggtg 17574223

                                                            
Query: 514      agcgtgagggagagggagaagggcatgtactccacactcttggt 557
                || | || |||||| ||||| |||||| ||||||| ||||||||
Sbjct: 17574224 agggagaaggagagcgagaacggcatgaactccacgctcttggt 17574267



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                                   
Query: 572      cgatgatgctgagaggcgcgacgaagacgcacacggagaagccgacgcaga 622
                |||||||||| || || |||||||||||||  ||||||||||| |||||||
Sbjct: 17574381 cgatgatgctaaggggggcgacgaagacgctgacggagaagccaacgcaga 17574431



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 59/71 (83%)
 Strand = Plus / Plus

                                                                            
Query: 666      gagggtgaggacgaaaatgagcccgaagccggcgatgttgangaggaggacgatcttggc 725
                ||||||||||| ||  ||||| |||||| || ||| ||||| |||||||| || ||||||
Sbjct: 17574475 gagggtgaggaggaggatgaggccgaagacgccgacgttgacgaggaggaggagcttggc 17574534

                           
Query: 726      tgtgaaaatct 736
                 ||||| ||||
Sbjct: 17574535 ggtgaacatct 17574545
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  119 bits (60), Expect = 1e-23
 Identities = 93/104 (89%)
 Strand = Plus / Plus

                                                                            
Query: 454      gcgacgtatttgtccttgatgagcaggccgtagaggaaccagacgatggcgctgagggtg 513
                ||||| ||||||||||||||||| |||||||||||||||||||||| |||||||| ||||
Sbjct: 17667988 gcgacatatttgtccttgatgaggaggccgtagaggaaccagacgacggcgctgatggtg 17668047

                                                            
Query: 514      agcgtgagggagagggagaagggcatgtactccacactcttggt 557
                || | || |||||| ||||| |||||| ||||||| ||||||||
Sbjct: 17668048 agggagaaggagagcgagaacggcatgaactccacgctcttggt 17668091



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                                   
Query: 572      cgatgatgctgagaggcgcgacgaagacgcacacggagaagccgacgcaga 622
                |||||||||| || || |||||||||||||  ||||||||||| |||||||
Sbjct: 17668205 cgatgatgctaaggggggcgacgaagacgctgacggagaagccaacgcaga 17668255



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 59/71 (83%)
 Strand = Plus / Plus

                                                                            
Query: 666      gagggtgaggacgaaaatgagcccgaagccggcgatgttgangaggaggacgatcttggc 725
                ||||||||||| ||  ||||| |||||| || ||| ||||| |||||||| || ||||||
Sbjct: 17668299 gagggtgaggaggaggatgaggccgaagacgccgacgttgacgaggaggaggagcttggc 17668358

                           
Query: 726      tgtgaaaatct 736
                 ||||| ||||
Sbjct: 17668359 ggtgaacatct 17668369
to top
>dbj|AK109114.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-155-C05, full
           insert sequence
          Length = 1492

 Score =  105 bits (53), Expect = 2e-19
 Identities = 110/129 (85%)
 Strand = Plus / Minus

                                                                       
Query: 472 atgagcaggccgtagaggaaccagacgatggcgctgagggtgagcgtgagggagagggag 531
           ||||| |||||||||| ||||||||||| |||||||||||||||   || ||||||  ||
Sbjct: 706 atgaggaggccgtagaagaaccagacgacggcgctgagggtgaggaagaaggagagccag 647

                                                                       
Query: 532 aagggcatgtactccacactcttggtcttgatcacacgaccgatgatgctgagaggcgcg 591
           ||||||||| ||||||| ||||||||| |||||||  | | ||||||| |||| || |||
Sbjct: 646 aagggcatgaactccacgctcttggtcctgatcacttgcctgatgatggtgagcggggcg 587

                    
Query: 592 acgaagacg 600
           |||||||||
Sbjct: 586 acgaagacg 578
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 93.7 bits (47), Expect = 8e-16
 Identities = 83/95 (87%)
 Strand = Plus / Plus

                                                                            
Query: 472      atgagcaggccgtagaggaaccagacgatggcgctgagggtgagcgtgagggagagggag 531
                ||||| |||||||||| ||||||||||| |||||||||||||||   || ||||||  ||
Sbjct: 12981206 atgaggaggccgtagaagaaccagacgacggcgctgagggtgaggaagaaggagagccag 12981265

                                                   
Query: 532      aagggcatgtactccacactcttggtcttgatcac 566
                ||||||||| ||||||| ||||||||| |||||||
Sbjct: 12981266 aagggcatgaactccacgctcttggtcctgatcac 12981300



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                           
Query: 522      ggagagggagaagggcatgtactccac 548
                |||||||||||||||||||||||||||
Sbjct: 12705184 ggagagggagaagggcatgtactccac 12705158
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 93.7 bits (47), Expect = 8e-16
 Identities = 83/95 (87%)
 Strand = Plus / Plus

                                                                            
Query: 472      atgagcaggccgtagaggaaccagacgatggcgctgagggtgagcgtgagggagagggag 531
                ||||| |||||||||| ||||||||||| |||||||||||||||   || ||||||  ||
Sbjct: 12977981 atgaggaggccgtagaagaaccagacgacggcgctgagggtgaggaagaaggagagccag 12978040

                                                   
Query: 532      aagggcatgtactccacactcttggtcttgatcac 566
                ||||||||| ||||||| ||||||||| |||||||
Sbjct: 12978041 aagggcatgaactccacgctcttggtcctgatcac 12978075



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                           
Query: 522      ggagagggagaagggcatgtactccac 548
                |||||||||||||||||||||||||||
Sbjct: 12701947 ggagagggagaagggcatgtactccac 12701921
to top
>gb|AC134231.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0006D11, complete sequence
          Length = 176637

 Score = 93.7 bits (47), Expect = 8e-16
 Identities = 83/95 (87%)
 Strand = Plus / Plus

                                                                         
Query: 472   atgagcaggccgtagaggaaccagacgatggcgctgagggtgagcgtgagggagagggag 531
             ||||| |||||||||| ||||||||||| |||||||||||||||   || ||||||  ||
Sbjct: 58904 atgaggaggccgtagaagaaccagacgacggcgctgagggtgaggaagaaggagagccag 58963

                                                
Query: 532   aagggcatgtactccacactcttggtcttgatcac 566
             ||||||||| ||||||| ||||||||| |||||||
Sbjct: 58964 aagggcatgaactccacgctcttggtcctgatcac 58998
to top
>gb|BT017750.1| Zea mays clone EL01N0450B09.c mRNA sequence
          Length = 1251

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 143/176 (81%), Gaps = 2/176 (1%)
 Strand = Plus / Minus

                                                                       
Query: 448 gggagcgcgacgtatttgtccttgatgagcaggccgtagaggaaccagacgatggcgctg 507
           ||||||| ||||||   ||||||| |||  |||||||| | ||||||| ||| |||||||
Sbjct: 721 gggagcgtgacgtaggggtccttggtgaagaggccgtacaagaaccaggcgacggcgctg 662

                                                                       
Query: 508 agggtgagcgtgagggagagggagaagggcatgtactccacactcttggtcttgatcaca 567
           ||||||||   || |||||||| |||||||||| ||||  ||||||| ||| ||||||||
Sbjct: 661 agggtgaggaagaaggagagggtgaagggcatgaactcggcactcttcgtcctgatcaca 602

                                                                   
Query: 568 -cgaccgatgatgctgagaggcgcgacgaagacgcacacggagaagccgacgcaga 622
            |||  ||||| ||| || || ||||||||||||  || ||||||| ||| |||||
Sbjct: 601 acgaa-gatgacgctcaggggggcgacgaagacggccatggagaaggcgaggcaga 547
to top
>gb|AY108458.1| Zea mays PCO137991 mRNA sequence
          Length = 991

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 127/158 (80%)
 Strand = Plus / Minus

                                                                       
Query: 465 gtccttgatgagcaggccgtagaggaaccagacgatggcgctgagggtgagcgtgaggga 524
           ||||||| |||  |||||||||  ||||||| ||| ||||||||| |||||   || |||
Sbjct: 233 gtccttggtgaagaggccgtagcagaaccaggcgacggcgctgagcgtgaggcagaagga 174

                                                                       
Query: 525 gagggagaagggcatgtactccacactcttggtcttgatcacacgaccgatgatgctgag 584
           ||||  || ||||| | |||| || ||||||||||||| |||     |||||||||||||
Sbjct: 173 gaggctgatgggcaggaactcgacgctcttggtcttgaccaccttgacgatgatgctgag 114

                                                 
Query: 585 aggcgcgacgaagacgcacacggagaagccgacgcaga 622
            |||||||||||||||  || ||||||| ||| |||||
Sbjct: 113 cggcgcgacgaagacggccatggagaaggcgaggcaga 76
to top
>ref|NM_121320.2| Arabidopsis thaliana unknown protein AT5G13170 mRNA, complete cds
          Length = 1303

 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                   
Query: 531 gaagggcatgtactccacactcttggtcttgatcacacga 570
           |||||||||||||||||||||||| ||||| |||||||||
Sbjct: 642 gaagggcatgtactccacactctttgtctttatcacacga 603
to top
>gb|AY113934.1| Arabidopsis thaliana putative senescence-associated protein SAG29
           (At5g13170) mRNA, complete cds
          Length = 910

 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                   
Query: 531 gaagggcatgtactccacactcttggtcttgatcacacga 570
           |||||||||||||||||||||||| ||||| |||||||||
Sbjct: 507 gaagggcatgtactccacactctttgtctttatcacacga 468
to top
>gb|AY045949.1| Arabidopsis thaliana putative senescence-associated protein SAG29
           (At5g13170) mRNA, complete cds
          Length = 1291

 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                   
Query: 531 gaagggcatgtactccacactcttggtcttgatcacacga 570
           |||||||||||||||||||||||| ||||| |||||||||
Sbjct: 643 gaagggcatgtactccacactctttgtctttatcacacga 604
to top
>emb|AL391711.1|ATT19L5 Arabidopsis thaliana DNA chromosome 5, BAC clone T19L5 (ESSA project)
          Length = 82207

 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 38/40 (95%)
 Strand = Plus / Plus

                                                     
Query: 531   gaagggcatgtactccacactcttggtcttgatcacacga 570
             |||||||||||||||||||||||| ||||| |||||||||
Sbjct: 55145 gaagggcatgtactccacactctttgtctttatcacacga 55184
to top
>emb|BX829518.1|CNS0A267 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB18ZG05 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 936

 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                   
Query: 531 gaagggcatgtactccacactcttggtcttgatcacacga 570
           |||||||||||||||||||||||| ||||| |||||||||
Sbjct: 454 gaagggcatgtactccacactctttgtctttatcacacga 415
to top
>emb|BX830132.1|CNS0A181 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB61ZE05 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1101

 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                   
Query: 531 gaagggcatgtactccacactcttggtcttgatcacacga 570
           |||||||||||||||||||||||| ||||| |||||||||
Sbjct: 623 gaagggcatgtactccacactctttgtctttatcacacga 584
to top
>gb|AY087836.1| Arabidopsis thaliana clone 38843 mRNA, complete sequence
          Length = 1269

 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                   
Query: 531 gaagggcatgtactccacactcttggtcttgatcacacga 570
           |||||||||||||||||||||||| ||||| |||||||||
Sbjct: 642 gaagggcatgtactccacactctttgtctttatcacacga 603
to top
>dbj|AB011442.1| Triticum aestivum WESR1 mRNA, partial sequence
          Length = 543

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 34/35 (97%)
 Strand = Plus / Minus

                                              
Query: 532 aagggcatgtactccacactcttggtcttgatcac 566
           ||||||||||||||||||||||||||| |||||||
Sbjct: 174 aagggcatgtactccacactcttggtcctgatcac 140
to top
>gb|AC108759.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone
              OSJNBa0072P02, complete sequence
          Length = 157488

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 74/89 (83%)
 Strand = Plus / Plus

                                                                          
Query: 478    aggccgtagaggaaccagacgatggcgctgagggtgagcgtgagggagagggagaagggc 537
              |||||||||| ||||||| ||| ||||||||| |||||   || |||||| ||||| |||
Sbjct: 121181 aggccgtagaagaaccaggcgacggcgctgagcgtgaggaagaaggagagcgagaacggc 121240

                                           
Query: 538    atgtactccacactcttggtcttgatcac 566
              ||| ||||| | || || |||||||||||
Sbjct: 121241 atgaactccgcgcttttcgtcttgatcac 121269
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 74/89 (83%)
 Strand = Plus / Plus

                                                                            
Query: 478      aggccgtagaggaaccagacgatggcgctgagggtgagcgtgagggagagggagaagggc 537
                |||||||||| ||||||| ||| ||||||||| |||||   || |||||| ||||| |||
Sbjct: 19401955 aggccgtagaagaaccaggcgacggcgctgagcgtgaggaagaaggagagcgagaacggc 19402014

                                             
Query: 538      atgtactccacactcttggtcttgatcac 566
                ||| ||||| | || || |||||||||||
Sbjct: 19402015 atgaactccgcgcttttcgtcttgatcac 19402043
to top
>gb|AY105503.1| Zea mays PCO075069 mRNA sequence
          Length = 549

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                    
Query: 531 gaagggcatgtactccacactcttggtcttgatcacacgac 571
           ||||||||||||||| || ||||||||||||||||| ||||
Sbjct: 311 gaagggcatgtactcaacgctcttggtcttgatcactcgac 271
to top
>ref|NM_113718.2| Arabidopsis thaliana unknown protein AT3G28007 mRNA, complete cds
          Length = 986

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                       
Query: 523 gagagggagaagggcatgtactccacactcttggtcttgatcac 566
           ||||| ||||| |||||||||| |||||| ||||||||||||||
Sbjct: 595 gagagagagaatggcatgtacttcacacttttggtcttgatcac 552
to top
>gb|AF428275.1|AF428275 Arabidopsis thaliana unknown protein mRNA, complete cds
          Length = 984

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                       
Query: 523 gagagggagaagggcatgtactccacactcttggtcttgatcac 566
           ||||| ||||| |||||||||| |||||| ||||||||||||||
Sbjct: 592 gagagagagaatggcatgtacttcacacttttggtcttgatcac 549
to top
>gb|AY086230.1| Arabidopsis thaliana clone 22745 mRNA, complete sequence
          Length = 937

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                       
Query: 523 gagagggagaagggcatgtactccacactcttggtcttgatcac 566
           ||||| ||||| |||||||||| |||||| ||||||||||||||
Sbjct: 596 gagagagagaatggcatgtacttcacacttttggtcttgatcac 553
to top
>dbj|AK118293.1| Arabidopsis thaliana At3g28007 mRNA for unknown protein, complete
           cds, clone: RAFL19-58-G08
          Length = 471

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                       
Query: 523 gagagggagaagggcatgtactccacactcttggtcttgatcac 566
           ||||| ||||| |||||||||| |||||| ||||||||||||||
Sbjct: 95  gagagagagaatggcatgtacttcacacttttggtcttgatcac 52
to top
>dbj|AB028616.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MMG15
          Length = 86139

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                        
Query: 523  gagagggagaagggcatgtactccacactcttggtcttgatcac 566
            ||||| ||||| |||||||||| |||||| ||||||||||||||
Sbjct: 9216 gagagagagaatggcatgtacttcacacttttggtcttgatcac 9259
to top
>gb|BT002215.1| Arabidopsis thaliana At3g28008/At3g28008 mRNA, complete cds
          Length = 756

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                       
Query: 523 gagagggagaagggcatgtactccacactcttggtcttgatcac 566
           ||||| ||||| |||||||||| |||||| ||||||||||||||
Sbjct: 509 gagagagagaatggcatgtacttcacacttttggtcttgatcac 466
to top
>gb|AC121491.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBb0050D18, complete sequence
          Length = 126350

 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                        
Query: 522   ggagagggagaagggcatgtactccac 548
             |||||||||||||||||||||||||||
Sbjct: 59637 ggagagggagaagggcatgtactccac 59611
to top
>emb|BX822431.1|CNS0A77F Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB37ZH08 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 946

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 529 gagaagggcatgtactccacactcttggtcttgatcac 566
           ||||| |||||||||| |||||| ||||||||||||||
Sbjct: 551 gagaatggcatgtacttcacacttttggtcttgatcac 514
to top
>gb|BT018599.1| Zea mays clone EL01N0449A02.d mRNA sequence
          Length = 1762

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 522 ggagagggagaagggcatgtactccacactcttggtc 558
           |||||| |||||||||||| ||||||| |||||||||
Sbjct: 759 ggagagcgagaagggcatgaactccacgctcttggtc 723
to top
>gb|BT013320.1| Lycopersicon esculentum clone 135010F, mRNA sequence
          Length = 1428

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 535 ggcatgtactccacactcttggtcttgat 563
           |||||||| ||||||||||||||||||||
Sbjct: 662 ggcatgtattccacactcttggtcttgat 634
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                     
Query: 530      agaagggcatgtactccacactcttggtcttgatcac 566
                ||||||||||||||||||| ||||| ||| |||||||
Sbjct: 19957439 agaagggcatgtactccacgctcttcgtcctgatcac 19957403



 Score = 42.1 bits (21), Expect = 2.6
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                     
Query: 530      agaagggcatgtactccacactcttggtcttgatcac 566
                |||| |||||||||||||| ||||| ||||| |||||
Sbjct: 23876079 agaacggcatgtactccacgctcttcgtctttatcac 23876043
to top
>dbj|AP004361.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0062A24
          Length = 148362

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                  
Query: 530   agaagggcatgtactccacactcttggtcttgatcac 566
             ||||||||||||||||||| ||||| ||| |||||||
Sbjct: 60348 agaagggcatgtactccacgctcttcgtcctgatcac 60312
to top
>dbj|AK104255.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-D11, full
           insert sequence
          Length = 1168

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 530 agaagggcatgtactccacactcttggtcttgatcac 566
           ||||||||||||||||||| ||||| ||| |||||||
Sbjct: 690 agaagggcatgtactccacgctcttcgtcctgatcac 654
to top
>dbj|AK104143.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-G10, full
           insert sequence
          Length = 1096

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 530 agaagggcatgtactccacactcttggtcttgatcac 566
           ||||||||||||||||||| ||||| ||| |||||||
Sbjct: 694 agaagggcatgtactccacgctcttcgtcctgatcac 658
to top
>dbj|AK066226.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013057K13, full
           insert sequence
          Length = 1213

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 530 agaagggcatgtactccacactcttggtcttgatcac 566
           ||||||||||||||||||| ||||| ||| |||||||
Sbjct: 695 agaagggcatgtactccacgctcttcgtcctgatcac 659
to top
>ref|XM_465955.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1562

 Score = 48.1 bits (24), Expect = 0.041
 Identities = 84/104 (80%)
 Strand = Plus / Minus

                                                                       
Query: 529 gagaagggcatgtactccacactcttggtcttgatcacacgaccgatgatgctgagaggc 588
           ||||| |||||| ||||||| |||||||||  ||||||  | | ||||||||| |  || 
Sbjct: 706 gagaatggcatgaactccacgctcttggtccggatcaccagcctgatgatgctcaaggga 647

                                                       
Query: 589 gcgacgaagacgcacacggagaagccgacgcagatccagccgag 632
           ||| |||||||||  |  |||| | |||||||||||||||||||
Sbjct: 646 gcggcgaagacgctgagcgagacggcgacgcagatccagccgag 603
to top
>gb|AC135419.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0044P19, complete sequence
          Length = 176917

 Score = 48.1 bits (24), Expect = 0.041
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                             
Query: 535   ggcatgtactccacactcttggtcttgatcac 566
             |||||||||||||| ||||| |||||||||||
Sbjct: 42123 ggcatgtactccacgctcttcgtcttgatcac 42092
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 48.1 bits (24), Expect = 0.041
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                                
Query: 535      ggcatgtactccacactcttggtcttgatcac 566
                |||||||||||||| ||||| |||||||||||
Sbjct: 20728899 ggcatgtactccacgctcttcgtcttgatcac 20728868
to top
>gb|AC115109.2| Homo sapiens BAC clone RP11-78I10 from 2, complete sequence
          Length = 59356

 Score = 48.1 bits (24), Expect = 0.041
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 504   gctgagggtgagcgtgagggagagggag 531
             |||||||||||| |||||||||||||||
Sbjct: 45724 gctgagggtgagggtgagggagagggag 45751
to top
>dbj|AK103266.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033124G19, full
           insert sequence
          Length = 1562

 Score = 48.1 bits (24), Expect = 0.041
 Identities = 84/104 (80%)
 Strand = Plus / Minus

                                                                       
Query: 529 gagaagggcatgtactccacactcttggtcttgatcacacgaccgatgatgctgagaggc 588
           ||||| |||||| ||||||| |||||||||  ||||||  | | ||||||||| |  || 
Sbjct: 706 gagaatggcatgaactccacgctcttggtccggatcaccagcctgatgatgctcaaggga 647

                                                       
Query: 589 gcgacgaagacgcacacggagaagccgacgcagatccagccgag 632
           ||| |||||||||  |  |||| | |||||||||||||||||||
Sbjct: 646 gcggcgaagacgctgagcgagacggcgacgcagatccagccgag 603
to top
>dbj|AK063475.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-B01, full
           insert sequence
          Length = 1211

 Score = 48.1 bits (24), Expect = 0.041
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 535 ggcatgtactccacactcttggtcttgatcac 566
           |||||||||||||| ||||| |||||||||||
Sbjct: 715 ggcatgtactccacgctcttcgtcttgatcac 684
to top
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                              
Query: 293     ccttgccgacgttgatcacgacgacgtggtc 323
               ||||| || ||||||||||||||||||||||
Sbjct: 3505081 ccttgtcggcgttgatcacgacgacgtggtc 3505111
to top
>emb|CT030247.6| Mouse DNA sequence from clone RP23-340G24 on chromosome 9, complete
              sequence
          Length = 218753

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 506    tgagggtgagcgtgagggagagggaga 532
              |||||||||| ||||||||||||||||
Sbjct: 141565 tgagggtgagggtgagggagagggaga 141591
to top
>gb|AC109170.10| Mus musculus chromosome 8, clone RP23-87B3, complete sequence
          Length = 274518

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 510    ggtgagcgtgagggagagggagaagg 535
              |||||| |||||||||||||||||||
Sbjct: 117702 ggtgagggtgagggagagggagaagg 117677
to top
>gb|AC123794.4| Mus musculus BAC clone RP24-315P14 from chromosome 8, complete sequence
          Length = 187246

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 510    ggtgagcgtgagggagagggagaagg 535
              |||||| |||||||||||||||||||
Sbjct: 127007 ggtgagggtgagggagagggagaagg 126982
to top
>emb|BX005072.20| Human DNA sequence from clone XXyac-59F3 on chromosome 10 Contains the
             5' end of a novel gene, a novel gene (MGC35285) and a CpG
             island, complete sequence
          Length = 97407

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 335   ccttccatgcctctttcccctccttg 360
             |||||||| |||||||||||||||||
Sbjct: 44275 ccttccatacctctttcccctccttg 44250
to top
>emb|AL450334.15| Human DNA sequence from clone RP11-556L1 on chromosome 10 Contains gene
             DKFZP566K0524, the gene for a novel protein similar to
             tyrosine phosphatase (MGC35285), the 3' end of a KIAA0187
             pseudogene, the 3' end of a novel gene, the gene for a
             novel protein similar to ARF GTPase-activating protein
             (MRIP2) and a CpG island, complete sequence
          Length = 171930

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 335   ccttccatgcctctttcccctccttg 360
             |||||||| |||||||||||||||||
Sbjct: 63794 ccttccatacctctttcccctccttg 63769
to top
>gb|AC013284.9| Homo sapiens chromosome 10 clone RP11-13E1, complete sequence
          Length = 154259

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 335   ccttccatgcctctttcccctccttg 360
             |||||||| |||||||||||||||||
Sbjct: 97949 ccttccatacctctttcccctccttg 97974
to top
>gb|AC026739.7| Homo sapiens chromosome 5 clone CTD-2580L4, complete sequence
          Length = 186308

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 335   ccttccatgcctctttcccctccttg 360
             |||||||| |||||||||||||||||
Sbjct: 61153 ccttccatacctctttcccctccttg 61128
to top
>ref|NM_101374.2| Arabidopsis thaliana unknown protein AT1G15040 transcript variant
            AT1G15040.2 mRNA, complete cds
          Length = 1753

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 8    gtttgttttacatacatacag 28
            |||||||||||||||||||||
Sbjct: 992  gtttgttttacatacatacag 1012
to top
>ref|XM_465111.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1377

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 534 gggcatgtactccacactcttggtcttgatcac 566
           ||||||||||||||| ||||| |||| ||||||
Sbjct: 708 gggcatgtactccacgctcttagtctggatcac 676
to top
>ref|XM_507468.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0010K08.10
           mRNA
          Length = 1383

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 534 gggcatgtactccacactcttggtcttgatcac 566
           ||||||||||||||| ||||| |||| ||||||
Sbjct: 708 gggcatgtactccacgctcttagtctggatcac 676
to top
>ref|XM_507467.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0010K08.10
           mRNA
          Length = 1384

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 534 gggcatgtactccacactcttggtcttgatcac 566
           ||||||||||||||| ||||| |||| ||||||
Sbjct: 709 gggcatgtactccacgctcttagtctggatcac 677
to top
>ref|XM_506777.2| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0010K08.10
           mRNA
          Length = 1485

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 534 gggcatgtactccacactcttggtcttgatcac 566
           ||||||||||||||| ||||| |||| ||||||
Sbjct: 705 gggcatgtactccacgctcttagtctggatcac 673
to top
>ref|NM_192689.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 780

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 530 agaagggcatgtactccacactcttggtcttgatcac 566
           |||| |||||||||||||| ||||| ||||| |||||
Sbjct: 502 agaacggcatgtactccacgctcttcgtctttatcac 466
to top
>gb|AE014843.1| Plasmodium falciparum 3D7 chromosome 11 section 8 of 8 of the complete
             sequence
          Length = 271546

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 59    aatattatttttcttggaaaa 79
             |||||||||||||||||||||
Sbjct: 37263 aatattatttttcttggaaaa 37243
to top
>emb|AL590995.14| Human DNA sequence from clone RP11-475B22 on chromosome 6, complete
           sequence
          Length = 113362

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 6   tagtttgttttacatacatacagta 30
           |||||||||||||||| ||||||||
Sbjct: 402 tagtttgttttacataaatacagta 378
to top
>emb|AL590673.6| Human DNA sequence from clone RP11-202K9 on chromosome 6, complete
              sequence
          Length = 123236

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 6      tagtttgttttacatacatacagta 30
              |||||||||||||||| ||||||||
Sbjct: 121638 tagtttgttttacataaatacagta 121614
to top
>gb|AF332456.1| Arabidopsis thaliana clone C00162 (e) unknown protein (At1g15045)
           mRNA, complete cds
          Length = 1002

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 8   gtttgttttacatacatacag 28
           |||||||||||||||||||||
Sbjct: 933 gtttgttttacatacatacag 953
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                 
Query: 534      gggcatgtactccacactcttggtcttgatcac 566
                ||||||||||||||| ||||| |||| ||||||
Sbjct: 11593469 gggcatgtactccacgctcttagtctggatcac 11593501
to top
>emb|BX817147.1|CNS0AD8C Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH89ZF09 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1446

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 8    gtttgttttacatacatacag 28
            |||||||||||||||||||||
Sbjct: 988  gtttgttttacatacatacag 1008
to top
>dbj|AB205497.1| Uncultured bacterium gene for putative aminotransferase, partial
           cds, clone:sd2
          Length = 303

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 371 ccaccaccggcgtcgcgttca 391
           |||||||||||||||||||||
Sbjct: 56  ccaccaccggcgtcgcgttca 36
to top
>gb|AC012189.3|T15D22 Arabidopsis thaliana chromosome 1 BAC T15D22 sequence, complete
             sequence
          Length = 23652

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 8     gtttgttttacatacatacag 28
             |||||||||||||||||||||
Sbjct: 19365 gtttgttttacatacatacag 19345
to top
>ref|NM_214275.1| Sus scrofa formiminotransferase-cyclodeaminase (FTCD), mRNA
          Length = 1843

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 194  agcccgcccccggggccgccg 214
            |||||||||||||||||||||
Sbjct: 1099 agcccgcccccggggccgccg 1079
to top
>dbj|AP003303.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0704D04
          Length = 147638

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                  
Query: 530   agaagggcatgtactccacactcttggtcttgatcac 566
             |||| |||||||||||||| ||||| ||||| |||||
Sbjct: 22483 agaacggcatgtactccacgctcttcgtctttatcac 22447
to top
>dbj|AP005532.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0010K08
          Length = 184760

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 534   gggcatgtactccacactcttggtcttgatcac 566
             ||||||||||||||| ||||| |||| ||||||
Sbjct: 39758 gggcatgtactccacgctcttagtctggatcac 39790
to top
>dbj|AK104467.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C10, full
           insert sequence
          Length = 1383

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 534 gggcatgtactccacactcttggtcttgatcac 566
           ||||||||||||||| ||||| |||| ||||||
Sbjct: 708 gggcatgtactccacgctcttagtctggatcac 676
to top
>dbj|AK104411.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-G12, full
           insert sequence
          Length = 1377

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 534 gggcatgtactccacactcttggtcttgatcac 566
           ||||||||||||||| ||||| |||| ||||||
Sbjct: 708 gggcatgtactccacgctcttagtctggatcac 676
to top
>dbj|AK100174.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023027A16, full
           insert sequence
          Length = 1484

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 534 gggcatgtactccacactcttggtcttgatcac 566
           ||||||||||||||| ||||| |||| ||||||
Sbjct: 704 gggcatgtactccacgctcttagtctggatcac 672
to top
>dbj|AK071676.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023108F17, full
           insert sequence
          Length = 1384

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 534 gggcatgtactccacactcttggtcttgatcac 566
           ||||||||||||||| ||||| |||| ||||||
Sbjct: 709 gggcatgtactccacgctcttagtctggatcac 677
to top
>gb|L16507.1|PIGFORM Sus scrofa formiminotransferase-cyclodeaminase mRNA, complete cds
          Length = 1843

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 194  agcccgcccccggggccgccg 214
            |||||||||||||||||||||
Sbjct: 1099 agcccgcccccggggccgccg 1079


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,305,484
Number of Sequences: 3902068
Number of extensions: 6305484
Number of successful extensions: 211897
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 210998
Number of HSP's gapped (non-prelim): 899
length of query: 736
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 713
effective length of database: 17,143,297,704
effective search space: 12223171262952
effective search space used: 12223171262952
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)
to top