>ref|NM_190777.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2286

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 151/186 (81%)
 Strand = Plus / Minus

                                                                        
Query: 394  cctcgtatggcagcacgatcacaggggcagcgtgtatcgactcccatcgctccttcacca 453
            |||| ||||| | ||||| |||||| ||||| ||||| || ||||| || |||||||  |
Sbjct: 2161 cctcatatggtaacacgaccacaggagcagcatgtatagattcccaccgttccttcatga 2102

                                                                        
Query: 454  agcttttgaatgccgccaccatttctctccggaattctagctccctcgtgaatagatcaa 513
            ||||  |||| |||   ||||| || |||||||||||||| |||||||||||| ||||||
Sbjct: 2101 agctcatgaacgccttgaccatctccctccggaattctagttccctcgtgaattgatcaa 2042

                                                                        
Query: 514  gggtagagacggcaagaatgtatctgaaaggaaccacgagaagaactgcagaggatgcta 573
               || | |  |||||||  ||| ||||||||||||| |||||||| ||||| |||||||
Sbjct: 2041 acataaaaaatgcaagaacatatttgaaaggaaccacaagaagaacagcagatgatgcta 1982

                  
Query: 574  gaagaa 579
            ||||||
Sbjct: 1981 gaagaa 1976

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 151/186 (81%)
 Strand = Plus / Plus

                                                                            
Query: 394      cctcgtatggcagcacgatcacaggggcagcgtgtatcgactcccatcgctccttcacca 453
                |||| ||||| | ||||| |||||| ||||| ||||| || ||||| || |||||||  |
Sbjct: 37648906 cctcatatggtaacacgaccacaggagcagcatgtatagattcccaccgttccttcatga 37648965

                                                                            
Query: 454      agcttttgaatgccgccaccatttctctccggaattctagctccctcgtgaatagatcaa 513
                ||||  |||| |||   ||||| || |||||||||||||| |||||||||||| ||||||
Sbjct: 37648966 agctcatgaacgccttgaccatctccctccggaattctagttccctcgtgaattgatcaa 37649025

                                                                            
Query: 514      gggtagagacggcaagaatgtatctgaaaggaaccacgagaagaactgcagaggatgcta 573
                   || | |  |||||||  ||| ||||||||||||| |||||||| ||||| |||||||
Sbjct: 37649026 acataaaaaatgcaagaacatatttgaaaggaaccacaagaagaacagcagatgatgcta 37649085

                      
Query: 574      gaagaa 579
                ||||||
Sbjct: 37649086 gaagaa 37649091

>dbj|AP003286.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0677H08
          Length = 178830

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 151/186 (81%)
 Strand = Plus / Plus

                                                                          
Query: 394    cctcgtatggcagcacgatcacaggggcagcgtgtatcgactcccatcgctccttcacca 453
              |||| ||||| | ||||| |||||| ||||| ||||| || ||||| || |||||||  |
Sbjct: 109380 cctcatatggtaacacgaccacaggagcagcatgtatagattcccaccgttccttcatga 109439

                                                                          
Query: 454    agcttttgaatgccgccaccatttctctccggaattctagctccctcgtgaatagatcaa 513
              ||||  |||| |||   ||||| || |||||||||||||| |||||||||||| ||||||
Sbjct: 109440 agctcatgaacgccttgaccatctccctccggaattctagttccctcgtgaattgatcaa 109499

                                                                          
Query: 514    gggtagagacggcaagaatgtatctgaaaggaaccacgagaagaactgcagaggatgcta 573
                 || | |  |||||||  ||| ||||||||||||| |||||||| ||||| |||||||
Sbjct: 109500 acataaaaaatgcaagaacatatttgaaaggaaccacaagaagaacagcagatgatgcta 109559

                    
Query: 574    gaagaa 579
              ||||||
Sbjct: 109560 gaagaa 109565

>dbj|AK121602.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033041A14, full
            insert sequence
          Length = 2731

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 151/186 (81%)
 Strand = Plus / Minus

                                                                        
Query: 394  cctcgtatggcagcacgatcacaggggcagcgtgtatcgactcccatcgctccttcacca 453
            |||| ||||| | ||||| |||||| ||||| ||||| || ||||| || |||||||  |
Sbjct: 2555 cctcatatggtaacacgaccacaggagcagcatgtatagattcccaccgttccttcatga 2496

                                                                        
Query: 454  agcttttgaatgccgccaccatttctctccggaattctagctccctcgtgaatagatcaa 513
            ||||  |||| |||   ||||| || |||||||||||||| |||||||||||| ||||||
Sbjct: 2495 agctcatgaacgccttgaccatctccctccggaattctagttccctcgtgaattgatcaa 2436

                                                                        
Query: 514  gggtagagacggcaagaatgtatctgaaaggaaccacgagaagaactgcagaggatgcta 573
               || | |  |||||||  ||| ||||||||||||| |||||||| ||||| |||||||
Sbjct: 2435 acataaaaaatgcaagaacatatttgaaaggaaccacaagaagaacagcagatgatgcta 2376

                  
Query: 574  gaagaa 579
            ||||||
Sbjct: 2375 gaagaa 2370

>dbj|AK068777.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013159O06, full
            insert sequence
          Length = 2135

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 151/186 (81%)
 Strand = Plus / Minus

                                                                        
Query: 394  cctcgtatggcagcacgatcacaggggcagcgtgtatcgactcccatcgctccttcacca 453
            |||| ||||| | ||||| |||||| ||||| ||||| || ||||| || |||||||  |
Sbjct: 1929 cctcatatggtaacacgaccacaggagcagcatgtatagattcccaccgttccttcatga 1870

                                                                        
Query: 454  agcttttgaatgccgccaccatttctctccggaattctagctccctcgtgaatagatcaa 513
            ||||  |||| |||   ||||| || |||||||||||||| |||||||||||| ||||||
Sbjct: 1869 agctcatgaacgccttgaccatctccctccggaattctagttccctcgtgaattgatcaa 1810

                                                                        
Query: 514  gggtagagacggcaagaatgtatctgaaaggaaccacgagaagaactgcagaggatgcta 573
               || | |  |||||||  ||| ||||||||||||| |||||||| ||||| |||||||
Sbjct: 1809 acataaaaaatgcaagaacatatttgaaaggaaccacaagaagaacagcagatgatgcta 1750

                  
Query: 574  gaagaa 579
            ||||||
Sbjct: 1749 gaagaa 1744

>gb|BC081272.1| Xenopus laevis MGC86435 protein, mRNA (cDNA clone MGC:86435
            IMAGE:7012000), complete cds
          Length = 3558

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 236  tacaaaaaactgtacattacaa 257
            ||||||||||||||||||||||
Sbjct: 2886 tacaaaaaactgtacattacaa 2865

>emb|AL118523.18|HSJ1031J8 Human DNA sequence from clone RP5-1031J8 on chromosome 20 Contains a
              putative novel gene, STSs and GSSs, complete sequence
          Length = 155213

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 109    attctagtcccacccatcttct 130
              ||||||||||||||||||||||
Sbjct: 130622 attctagtcccacccatcttct 130643

>gb|U76636.1|XLU76636 Xenopus laevis calbindin D28k mRNA, complete cds
          Length = 3597

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 236  tacaaaaaactgtacattacaa 257
            ||||||||||||||||||||||
Sbjct: 2711 tacaaaaaactgtacattacaa 2690

>emb|AL161431.28| Human DNA sequence from clone RP11-54H7 on chromosome 13 Contains the
             3' end a novel gene (including KIAA0865) possible ortholog
             of rat myosin heavy chain Myr 8 (Loc192253) and 2 novel
             genes, complete sequence
          Length = 143802

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 245   ctgtacattacaacacaacgc 265
             |||||||||||||||||||||
Sbjct: 36386 ctgtacattacaacacaacgc 36406

>gb|AC154532.3| Mus musculus BAC clone RP23-469G7 from 14, complete sequence
          Length = 193236

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 539    gaaaggaaccacgagaagaac 559
              |||||||||||||||||||||
Sbjct: 176177 gaaaggaaccacgagaagaac 176197

>emb|CT030238.7| Mouse DNA sequence from clone RP23-428E20 on chromosome 14, complete
              sequence
          Length = 194408

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 228    tacaactgtacaaaaaactgt 248
              |||||||||||||||||||||
Sbjct: 129195 tacaactgtacaaaaaactgt 129215

>emb|AL627307.18| Mouse DNA sequence from clone RP23-258J11 on chromosome 4, complete
             sequence
          Length = 108542

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 561   gcagaggatgctagaagaatg 581
             |||||||||||||||||||||
Sbjct: 50707 gcagaggatgctagaagaatg 50727

>gb|CP000002.2| Bacillus licheniformis ATCC 14580, complete genome
          Length = 4222334

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 436     cccatcgctccttcaccaag 455
               ||||||||||||||||||||
Sbjct: 3609555 cccatcgctccttcaccaag 3609574

>gb|AE017333.1| Bacillus licheniformis DSM 13, complete genome
          Length = 4222645

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 436     cccatcgctccttcaccaag 455
               ||||||||||||||||||||
Sbjct: 3609724 cccatcgctccttcaccaag 3609743

>gb|AC153571.14| Mus musculus 10 BAC RP23-309H16 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 184967

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 351    ctggaagcttttgcggggag 370
              ||||||||||||||||||||
Sbjct: 161425 ctggaagcttttgcggggag 161444

>ref|XM_673402.1| Plasmodium berghei strain ANKA hypothetical protein (PB000133.02.0)
           partial mRNA
          Length = 1980

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 147 gagatgatactacaaataaa 166
           ||||||||||||||||||||
Sbjct: 692 gagatgatactacaaataaa 711

>emb|CR450740.6| Zebrafish DNA sequence from clone DKEY-98B14 in linkage group 8,
             complete sequence
          Length = 72765

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 4     tggcaaataatnctaatctctcc 26
             ||||||||||| |||||||||||
Sbjct: 61892 tggcaaataatactaatctctcc 61914

>emb|AJ616006.1| Bacillus licheniformis yvhJ gene (partial), yvyE gene, degS gene,
            degU gene, yviA gene and comFA gene (partial)
          Length = 4550

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 436  cccatcgctccttcaccaag 455
            ||||||||||||||||||||
Sbjct: 4107 cccatcgctccttcaccaag 4088

>emb|BX901878.6| Zebrafish DNA sequence from clone DKEY-11O15 in linkage group 21,
             complete sequence
          Length = 217310

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 231   aactgtacaaaaaactgtac 250
             ||||||||||||||||||||
Sbjct: 14767 aactgtacaaaaaactgtac 14748

>emb|CR861175.1| Pongo pygmaeus mRNA; cDNA DKFZp459L0816 (from clone DKFZp459L0816)
          Length = 2206

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 68  aatttactatgtgtactcct 87
           ||||||||||||||||||||
Sbjct: 568 aatttactatgtgtactcct 587

>gb|AC090041.13| Homo sapiens 12 BAC RP11-239F20 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 108979

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 240   aaaaactgtacattacaacacaac 263
             |||||||||||||||||| |||||
Sbjct: 59913 aaaaactgtacattacaaaacaac 59936

>gb|AF459920.1| Bacillus licheniformis hypothetical protein YviA (yviA), late
           competence protein ComFA (comFA), late competence
           protein ComFB (comFB), and late competence protein ComFC
           (comFC) genes, complete cds
          Length = 3630

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 436 cccatcgctccttcaccaag 455
           ||||||||||||||||||||
Sbjct: 986 cccatcgctccttcaccaag 967

>gb|AE005898.1| Caulobacter crescentus CB15 section 224 of 359 of the complete genome
          Length = 11272

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 544   gaaccacgagaagaactgca 563
             ||||||||||||||||||||
Sbjct: 10106 gaaccacgagaagaactgca 10125

>gb|AC092468.9| Homo sapiens 3 BAC RP11-326J18 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 114428

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 344   tgtctgcctggaagcttttg 363
             ||||||||||||||||||||
Sbjct: 60283 tgtctgcctggaagcttttg 60264

>gb|AC016604.6| Homo sapiens chromosome 5 clone CTD-2150I21, complete sequence
          Length = 94147

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 256   aacacaacgcctcacactac 275
             ||||||||||||||||||||
Sbjct: 14601 aacacaacgcctcacactac 14582

>gb|AC016635.8| Homo sapiens chromosome 5 clone RP11-313I12, complete sequence
          Length = 163536

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 256   aacacaacgcctcacactac 275
             ||||||||||||||||||||
Sbjct: 59790 aacacaacgcctcacactac 59809

>gb|AC008926.8| Homo sapiens chromosome 5 clone CTD-2285N11, complete sequence
          Length = 104088

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 256  aacacaacgcctcacactac 275
            ||||||||||||||||||||
Sbjct: 1812 aacacaacgcctcacactac 1831

>emb|CR381582.9| Zebrafish DNA sequence from clone DKEY-28M3 in linkage group 18,
             complete sequence
          Length = 215124

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 111   tctagtcccacccatcttct 130
             ||||||||||||||||||||
Sbjct: 85253 tctagtcccacccatcttct 85272

>gb|AF000070.1|AF000070 Thysanoteuthis rhombus cytochrome c oxidase subunit I (COI) gene,
           mitochondrial gene encoding mitochondrial protein,
           partial cds
          Length = 657

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 558 actgcagaggatgctagaag 577
           ||||||||||||||||||||
Sbjct: 305 actgcagaggatgctagaag 286


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,265,123
Number of Sequences: 3902068
Number of extensions: 4265123
Number of successful extensions: 70309
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 70198
Number of HSP's gapped (non-prelim): 111
length of query: 601
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 578
effective length of database: 17,143,297,704
effective search space: 9908826072912
effective search space used: 9908826072912
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)