>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,|
           chloroplast precursor (RuBisCO activase A) (RA A)
          Length = 464

 Score = 47.8 bits (112), Expect = 9e-06
 Identities = 20/20 (100%), Positives = 20/20 (100%)
 Frame = -2

Query: 135 NAKNYDPTARSDDGSCLYTF 76
           NAKNYDPTARSDDGSCLYTF
Sbjct: 445 NAKNYDPTARSDDGSCLYTF 464

>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
           (RubisCO activase alpha form)
          Length = 476

 Score = 39.7 bits (91), Expect = 0.002
 Identities = 16/19 (84%), Positives = 17/19 (89%)
 Frame = -2

Query: 132 AKNYDPTARSDDGSCLYTF 76
           A NYDPTARSDDGSC+Y F
Sbjct: 458 ATNYDPTARSDDGSCVYKF 476

>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 472

 Score = 39.3 bits (90), Expect = 0.003
 Identities = 16/17 (94%), Positives = 16/17 (94%)
 Frame = -2

Query: 132 AKNYDPTARSDDGSCLY 82
           AKNYDPTARSDDGSC Y
Sbjct: 454 AKNYDPTARSDDGSCTY 470

>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 474

 Score = 38.1 bits (87), Expect = 0.007
 Identities = 14/19 (73%), Positives = 18/19 (94%)
 Frame = -2

Query: 132 AKNYDPTARSDDGSCLYTF 76
           A+N+DPTARSDDG+C+Y F
Sbjct: 456 AENFDPTARSDDGTCVYNF 474


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,432,764
Number of Sequences: 219361
Number of extensions: 168423
Number of successful extensions: 281
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 281
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 281
length of database: 80,573,946
effective HSP length: 21
effective length of database: 75,967,365
effective search space used: 1823216760
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)