| Clone Name | rbaal4d20 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | ALR2_YEAST (P43553) Magnesium transporter ALR2 (Aluminum resista... | 35 | 0.21 | 2 | PTH_SYMTH (Q67JD0) Peptidyl-tRNA hydrolase (EC 3.1.1.29) (PTH) | 30 | 9.0 |
|---|
>ALR2_YEAST (P43553) Magnesium transporter ALR2 (Aluminum resistance protein 2)| Length = 858 Score = 35.0 bits (79), Expect = 0.21 Identities = 24/77 (31%), Positives = 35/77 (45%) Frame = +1 Query: 154 SRVRAHAQPQETSTEAKAVAVEGRDSETSRQH*LFHIHTYIHTMIVGISFSPLRMYAQAF 333 SRV H++ + S RDS+ + + F + +HT + G+ F L YAQ Sbjct: 251 SRVSFHSEISQAS----------RDSQETEEDVCFPMFRLLHTRVNGVDFDELEEYAQ-I 299 Query: 334 SPATMKSSAAQHSRNCE 384 S A S A H R+ E Sbjct: 300 SNAERNLSLANHQRHSE 316
>PTH_SYMTH (Q67JD0) Peptidyl-tRNA hydrolase (EC 3.1.1.29) (PTH)| Length = 189 Score = 29.6 bits (65), Expect = 9.0 Identities = 14/41 (34%), Positives = 21/41 (51%) Frame = -3 Query: 658 PVLRMGIGRPTPPWTWSRCFVQPAGSYEAMTPRGIMVQSIE 536 P LR+GIGRP P W + P G +A + +++E Sbjct: 130 PRLRIGIGRPAPGWEVIDWVLAPFGPDDAAAVAAALPRAVE 170 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 98,289,369 Number of Sequences: 219361 Number of extensions: 2007564 Number of successful extensions: 4413 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 4287 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4413 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6825954960 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)