ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal4d11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DQ407749.1| Gymnadenia conopsea eukaryotic translation initia... 64 3e-07
2ref|XM_479006.1| Oryza sativa (japonica cultivar-group), mRNA 54 3e-04
3ref|XM_506443.1| PREDICTED Oryza sativa (japonica cultivar-group... 54 3e-04
4dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 54 3e-04
5gb|DQ345329.1| Rosa chinensis eukaryotic translation initiation ... 54 3e-04
6dbj|AP004275.3| Oryza sativa (japonica cultivar-group) genomic D... 54 3e-04
7dbj|AK103429.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 3e-04
8dbj|AK062134.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 3e-04
9gb|AF094773.1|AF094773 Oryza sativa translation initiation facto... 54 3e-04
10gb|AY496435.1| Brassica napus eukaryotic translation initiation ... 48 0.020
11dbj|AK061867.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.020
12dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.020
13dbj|AK099039.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.020
14gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 48 0.020
15emb|AL731759.2|CNS07YPA Oryza sativa chromosome 12, . BAC OSJNBa... 48 0.020
16ref|NM_102425.2| Arabidopsis thaliana translation initiation fac... 46 0.077
17ref|NM_102426.3| Arabidopsis thaliana unknown protein AT1G26640 ... 46 0.077
18emb|AJ238624.1|SVE238624 Senecio vernalis mRNA for translation i... 46 0.077
19gb|AF492850.1| Arabidopsis thaliana putative initiation factor 5... 46 0.077
20gb|AY055789.1| Arabidopsis thaliana At1g26630/T24P13_1 mRNA, com... 46 0.077
21gb|AY039588.1| Arabidopsis thaliana At1g26630/T24P13_1 mRNA, com... 46 0.077
22emb|BX814371.1|CNS0ABYU Arabidopsis thaliana Full-length cDNA Co... 46 0.077
23gb|AY084827.1| Arabidopsis thaliana clone 118823 mRNA, complete ... 46 0.077
24gb|AC006535.7|AC006535 Genomic sequence for Arabidopsis thaliana... 46 0.077
25gb|AF296081.1|AF296081 Dianthus caryophyllus eukaryotic translat... 44 0.31
26dbj|AP004303.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.31
27ref|XM_469841.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.2
28gb|BT018311.1| Zea mays clone EL01T0207A06.c mRNA sequence 42 1.2
29gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.2
30gb|AC079887.17| Oryza sativa (japonica cultivar-group) chromosom... 42 1.2
31emb|Y07920.1|ZMTRINF5A Z.mays mRNA for translation initiation fa... 42 1.2
32emb|AJ312906.1|OSA312906 Oryza sativa mRNA for translation initi... 42 1.2
33emb|AJ252135.1|OSA252135 Oryza sativa mRNA for translation initi... 42 1.2
34gb|DQ083198.1| Oryza sativa (indica cultivar-group) clone 5S10E1... 42 1.2
35gb|AC084282.6| Oryza sativa chromosome 3 BAC OSJNBb0048A17 genom... 42 1.2
36dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
37gb|AC105915.5| Homo sapiens BAC clone RP11-69D13 from 4, complet... 42 1.2
38dbj|AK121592.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.2
39dbj|AK060387.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.2
40gb|AY103556.1| Zea mays PCO150862 mRNA sequence 42 1.2
41gb|DQ234392.1| Thinopyrum intermedium translation initiation fac... 40 4.8
42gb|BT016590.1| Zea mays clone Contig423 mRNA sequence 40 4.8
43gb|BT017712.1| Zea mays clone EL01N0446G03.c mRNA sequence 40 4.8
44emb|AL360002.5| Human DNA sequence from clone RP11-192B4 on chro... 40 4.8
45gb|AF034943.1|AF034943 Zea mays translation initiation factor 5A... 40 4.8 
>gb|DQ407749.1| Gymnadenia conopsea eukaryotic translation initiation factor 5A
           mRNA, complete cds
          Length = 889

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 57/66 (86%)
 Strand = Plus / Minus

                                                                       
Query: 248 gtccttgactgcgcagatctgctcctnccccatggccgacatgacagncagcgccaaatc 307
           |||||||||  |||||||||||||||  ||||| |||||||| || | |||| |||||||
Sbjct: 593 gtccttgacgccgcagatctgctcctcacccatcgccgacatcaccgacagcaccaaatc 534

                 
Query: 308 cttccc 313
           ||||||
Sbjct: 533 cttccc 528
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>ref|XM_479006.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 934

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                             
Query: 261 cagatctgctcctnccccatggccgacatgacag 294
           ||||||||||||| ||||||||| ||||||||||
Sbjct: 553 cagatctgctcctcccccatggcggacatgacag 520



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 87  acacccagcaatcactgcncttg 109
           |||||||||||||||||| ||||
Sbjct: 791 acacccagcaatcactgcacttg 769
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>ref|XM_506443.1| PREDICTED Oryza sativa (japonica cultivar-group), P0453E05.118 mRNA
          Length = 996

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                             
Query: 261 cagatctgctcctnccccatggccgacatgacag 294
           ||||||||||||| ||||||||| ||||||||||
Sbjct: 556 cagatctgctcctcccccatggcggacatgacag 523



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 87  acacccagcaatcactgcncttg 109
           |||||||||||||||||| ||||
Sbjct: 794 acacccagcaatcactgcacttg 772
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                                  
Query: 261      cagatctgctcctnccccatggccgacatgacag 294
                ||||||||||||| ||||||||| ||||||||||
Sbjct: 24264562 cagatctgctcctcccccatggcggacatgacag 24264595



 Score = 44.1 bits (22), Expect = 0.31
 Identities = 32/34 (94%), Gaps = 1/34 (2%)
 Strand = Plus / Minus

                                                 
Query: 261     cagatctgctcctnccccatggccgacatgacag 294
               ||||||||||||| ||||||||| ||||||||||
Sbjct: 7610199 cagatctgctcct-ccccatggcggacatgacag 7610167



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                       
Query: 87       acacccagcaatcactgcncttg 109
                |||||||||||||||||| ||||
Sbjct: 24264324 acacccagcaatcactgcacttg 24264346
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>gb|DQ345329.1| Rosa chinensis eukaryotic translation initiation factor eIF5A mRNA,
           complete cds
          Length = 474

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 74/91 (81%)
 Strand = Plus / Minus

                                                                       
Query: 268 gctcctnccccatggccgacatgacagncagcgccaaatccttccccccagcaaatncat 327
           ||||||  |||||||| |||||||||| || | | | |||||| ||| |||||||| |||
Sbjct: 445 gctcctctcccatggcagacatgacagtcaccacaagatccttgccctcagcaaatccat 386

                                          
Query: 328 ccttganctgggtcaggatagcatcatcagt 358
           |||| | ||| || || | ||||||||||||
Sbjct: 385 ccttaagctgagtgagcagagcatcatcagt 355
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>dbj|AP004275.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0453E05
          Length = 137364

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                               
Query: 261   cagatctgctcctnccccatggccgacatgacag 294
             ||||||||||||| ||||||||| ||||||||||
Sbjct: 76113 cagatctgctcctcccccatggcggacatgacag 76146



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 87    acacccagcaatcactgcncttg 109
             |||||||||||||||||| ||||
Sbjct: 75875 acacccagcaatcactgcacttg 75897
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>dbj|AK103429.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033128M07, full
           insert sequence
          Length = 996

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                             
Query: 261 cagatctgctcctnccccatggccgacatgacag 294
           ||||||||||||| ||||||||| ||||||||||
Sbjct: 556 cagatctgctcctcccccatggcggacatgacag 523



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 87  acacccagcaatcactgcncttg 109
           |||||||||||||||||| ||||
Sbjct: 794 acacccagcaatcactgcacttg 772
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>dbj|AK062134.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-E11, full
           insert sequence
          Length = 934

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                             
Query: 261 cagatctgctcctnccccatggccgacatgacag 294
           ||||||||||||| ||||||||| ||||||||||
Sbjct: 553 cagatctgctcctcccccatggcggacatgacag 520



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 87  acacccagcaatcactgcncttg 109
           |||||||||||||||||| ||||
Sbjct: 791 acacccagcaatcactgcacttg 769
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>gb|AF094773.1|AF094773 Oryza sativa translation initiation factor 5A (eIF-5A) mRNA,
           complete cds
          Length = 822

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                             
Query: 261 cagatctgctcctnccccatggccgacatgacag 294
           ||||||||||||| ||||||||| ||||||||||
Sbjct: 549 cagatctgctcctcccccatggcggacatgacag 516



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 87  acacccagcaatcactgcncttg 109
           |||||||||||||||||| ||||
Sbjct: 787 acacccagcaatcactgcacttg 765
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>gb|AY496435.1| Brassica napus eukaryotic translation initiation factor-5A mRNA,
           complete cds
          Length = 658

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                       
Query: 249 tccttgactgcgcagatctgctcctnccccatggccgacatgacagncagcgccaaatcc 308
           |||||||| || |||||||||||||  |||||||  |||||||||| || | ||| ||||
Sbjct: 461 tccttgacggcacagatctgctcctctcccatggaagacatgacagacaccaccacatcc 402

             
Query: 309 tt 310
           ||
Sbjct: 401 tt 400
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>dbj|AK061867.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-H10, full
           insert sequence
          Length = 961

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 65/80 (81%)
 Strand = Plus / Minus

                                                                       
Query: 258 gcgcagatctgctcctnccccatggccgacatgacagncagcgccaaatccttcccccca 317
           ||||||||||||||||  |||||||| ||||| |||| || | |||  ||||||||  | 
Sbjct: 558 gcgcagatctgctcctctcccatggcagacataacagtcaccaccaggtccttcccttct 499

                               
Query: 318 gcaaatncatccttganctg 337
            ||||| ||||||||| |||
Sbjct: 498 ccaaatccatccttgatctg 479
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 65/80 (81%)
 Strand = Plus / Minus

                                                                            
Query: 258      gcgcagatctgctcctnccccatggccgacatgacagncagcgccaaatccttcccccca 317
                ||||||||||||||||  |||||||| ||||| |||| || | |||  ||||||||  | 
Sbjct: 19506001 gcgcagatctgctcctctcccatggcagacataacagtcaccaccaggtccttcccttct 19505942

                                    
Query: 318      gcaaatncatccttganctg 337
                 ||||| ||||||||| |||
Sbjct: 19505941 ccaaatccatccttgatctg 19505922
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>dbj|AK099039.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013131C14, full
           insert sequence
          Length = 981

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 65/80 (81%)
 Strand = Plus / Minus

                                                                       
Query: 258 gcgcagatctgctcctnccccatggccgacatgacagncagcgccaaatccttcccccca 317
           ||||||||||||||||  |||||||| ||||| |||| || | |||  ||||||||  | 
Sbjct: 557 gcgcagatctgctcctctcccatggcagacataacagtcaccaccaggtccttcccttct 498

                               
Query: 318 gcaaatncatccttganctg 337
            ||||| ||||||||| |||
Sbjct: 497 ccaaatccatccttgatctg 478
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 65/80 (81%)
 Strand = Plus / Minus

                                                                            
Query: 258      gcgcagatctgctcctnccccatggccgacatgacagncagcgccaaatccttcccccca 317
                ||||||||||||||||  |||||||| ||||| |||| || | |||  ||||||||  | 
Sbjct: 19432214 gcgcagatctgctcctctcccatggcagacataacagtcaccaccaggtccttcccttct 19432155

                                    
Query: 318      gcaaatncatccttganctg 337
                 ||||| ||||||||| |||
Sbjct: 19432154 ccaaatccatccttgatctg 19432135
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>emb|AL731759.2|CNS07YPA Oryza sativa chromosome 12, . BAC OSJNBa0009K11 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 144596

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 65/80 (81%)
 Strand = Plus / Minus

                                                                         
Query: 258   gcgcagatctgctcctnccccatggccgacatgacagncagcgccaaatccttcccccca 317
             ||||||||||||||||  |||||||| ||||| |||| || | |||  ||||||||  | 
Sbjct: 38182 gcgcagatctgctcctctcccatggcagacataacagtcaccaccaggtccttcccttct 38123

                                 
Query: 318   gcaaatncatccttganctg 337
              ||||| ||||||||| |||
Sbjct: 38122 ccaaatccatccttgatctg 38103
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>ref|NM_102425.2| Arabidopsis thaliana translation initiation factor AT1G26630 mRNA,
           complete cds
          Length = 929

 Score = 46.1 bits (23), Expect = 0.077
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                         
Query: 249 tccttgactgcgcagatctgctcctnccccatggccgacatgacag 294
           |||||||| || |||||||||||||  |||||||  ||||||||||
Sbjct: 593 tccttgacggcacagatctgctcctctcccatggaagacatgacag 548
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>ref|NM_102426.3| Arabidopsis thaliana unknown protein AT1G26640 mRNA, complete cds
          Length = 1762

 Score = 46.1 bits (23), Expect = 0.077
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                          
Query: 249  tccttgactgcgcagatctgctcctnccccatggccgacatgacag 294
            |||||||| || |||||||||||||  |||||||  ||||||||||
Sbjct: 1674 tccttgacggcacagatctgctcctctcccatggaagacatgacag 1719
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>emb|AJ238624.1|SVE238624 Senecio vernalis mRNA for translation initiation factor 5A
           precursor protein eIF-5A (eifsv1 gene)
          Length = 480

 Score = 46.1 bits (23), Expect = 0.077
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 319 caaatncatccttganctgggtcaggatagcatcatcagtt 359
           ||||| ||||||||| |||||| || | |||||||||||||
Sbjct: 394 caaatccatccttgatctgggtaagaagagcatcatcagtt 354
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>gb|AF492850.1| Arabidopsis thaliana putative initiation factor 5A mRNA, complete
           cds
          Length = 726

 Score = 46.1 bits (23), Expect = 0.077
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                         
Query: 249 tccttgactgcgcagatctgctcctnccccatggccgacatgacag 294
           |||||||| || |||||||||||||  |||||||  ||||||||||
Sbjct: 538 tccttgacggcacagatctgctcctctcccatggaagacatgacag 493
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>gb|AY055789.1| Arabidopsis thaliana At1g26630/T24P13_1 mRNA, complete cds
          Length = 480

 Score = 46.1 bits (23), Expect = 0.077
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                         
Query: 249 tccttgactgcgcagatctgctcctnccccatggccgacatgacag 294
           |||||||| || |||||||||||||  |||||||  ||||||||||
Sbjct: 461 tccttgacggcacagatctgctcctctcccatggaagacatgacag 416
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>gb|AY039588.1| Arabidopsis thaliana At1g26630/T24P13_1 mRNA, complete cds
          Length = 765

 Score = 46.1 bits (23), Expect = 0.077
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                         
Query: 249 tccttgactgcgcagatctgctcctnccccatggccgacatgacag 294
           |||||||| || |||||||||||||  |||||||  ||||||||||
Sbjct: 544 tccttgacggcacagatctgctcctctcccatggaagacatgacag 499
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>emb|BX814371.1|CNS0ABYU Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB70ZA04 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 689

 Score = 46.1 bits (23), Expect = 0.077
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                         
Query: 249 tccttgactgcgcagatctgctcctnccccatggccgacatgacag 294
           |||||||| || |||||||||||||  |||||||  ||||||||||
Sbjct: 513 tccttgacggcacagatctgctcctctcccatggaagacatgacag 468
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>gb|AY084827.1| Arabidopsis thaliana clone 118823 mRNA, complete sequence
          Length = 781

 Score = 46.1 bits (23), Expect = 0.077
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                         
Query: 249 tccttgactgcgcagatctgctcctnccccatggccgacatgacag 294
           |||||||| || |||||||||||||  |||||||  ||||||||||
Sbjct: 592 tccttgacggcacagatctgctcctctcccatggaagacatgacag 547
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>gb|AC006535.7|AC006535 Genomic sequence for Arabidopsis thaliana BAC T24P13 from chromosome
            I, complete sequence
          Length = 98630

 Score = 46.1 bits (23), Expect = 0.077
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                          
Query: 249  tccttgactgcgcagatctgctcctnccccatggccgacatgacag 294
            |||||||| || |||||||||||||  |||||||  ||||||||||
Sbjct: 6837 tccttgacggcacagatctgctcctctcccatggaagacatgacag 6792
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>gb|AF296081.1|AF296081 Dianthus caryophyllus eukaryotic translation initiation factor 5A
           mRNA, complete cds
          Length = 810

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 246 acgtccttgactgcgcagatctgctc 271
           ||||||||||| ||||||||||||||
Sbjct: 533 acgtccttgacggcgcagatctgctc 508
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>dbj|AP004303.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0407H12
          Length = 167754

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 32/34 (94%), Gaps = 1/34 (2%)
 Strand = Plus / Minus

                                                
Query: 261    cagatctgctcctnccccatggccgacatgacag 294
              ||||||||||||| ||||||||| ||||||||||
Sbjct: 115609 cagatctgctcct-ccccatggcggacatgacag 115577
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>ref|XM_469841.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 859

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 258 gcgcagatctgctcctnccccatggccgacat 289
           ||||||||||||||||  |||||||| |||||
Sbjct: 533 gcgcagatctgctcctcacccatggcagacat 502
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>gb|BT018311.1| Zea mays clone EL01T0207A06.c mRNA sequence
          Length = 775

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 45/54 (83%)
 Strand = Plus / Minus

                                                                 
Query: 227 aggaagntacctggngccgacgtccttgactgcgcagatctgctcctnccccat 280
           |||||| ||| ||| ||| || ||||| |  |||||||||||||||| ||||||
Sbjct: 535 aggaagttacttggggccaacatccttcagcgcgcagatctgctcctcccccat 482
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 258      gcgcagatctgctcctnccccatggccgacat 289
                ||||||||||||||||  |||||||| |||||
Sbjct: 31086556 gcgcagatctgctcctcacccatggcagacat 31086525
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>gb|AC079887.17| Oryza sativa (japonica cultivar-group) chromosome 3 BAC OSJNBa0040E01
            genomic sequence, complete sequence
          Length = 168759

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 258  gcgcagatctgctcctnccccatggccgacat 289
            ||||||||||||||||  |||||||| |||||
Sbjct: 9508 gcgcagatctgctcctcacccatggcagacat 9539
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>emb|Y07920.1|ZMTRINF5A Z.mays mRNA for translation initiation factor 5A
          Length = 807

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 45/54 (83%)
 Strand = Plus / Minus

                                                                 
Query: 227 aggaagntacctggngccgacgtccttgactgcgcagatctgctcctnccccat 280
           |||||| ||| ||| ||| || ||||| |  |||||||||||||||| ||||||
Sbjct: 563 aggaagttacttggggccaacatccttcaacgcgcagatctgctcctcccccat 510
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>emb|AJ312906.1|OSA312906 Oryza sativa mRNA for translation initiation factor, eIF-5A (eIF-5A
           gene)
          Length = 831

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 258 gcgcagatctgctcctnccccatggccgacat 289
           ||||||||||||||||  |||||||| |||||
Sbjct: 528 gcgcagatctgctcctcacccatggcagacat 497
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>emb|AJ252135.1|OSA252135 Oryza sativa mRNA for translation initiation factor eIF-5A
          Length = 722

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 258 gcgcagatctgctcctnccccatggccgacat 289
           ||||||||||||||||  |||||||| |||||
Sbjct: 528 gcgcagatctgctcctcacccatggcagacat 497
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>gb|DQ083198.1| Oryza sativa (indica cultivar-group) clone 5S10E11 mRNA sequence
          Length = 371

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 258 gcgcagatctgctcctnccccatggccgacat 289
           ||||||||||||||||  |||||||| |||||
Sbjct: 191 gcgcagatctgctcctcacccatggcagacat 160
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>gb|AC084282.6| Oryza sativa chromosome 3 BAC OSJNBb0048A17 genomic sequence,
            complete sequence
          Length = 128017

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 258  gcgcagatctgctcctnccccatggccgacat 289
            ||||||||||||||||  |||||||| |||||
Sbjct: 7197 gcgcagatctgctcctcacccatggcagacat 7166
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 258      gcgcagatctgctcctnccccatggccgacat 289
                ||||||||||||||||  |||||||| |||||
Sbjct: 31177079 gcgcagatctgctcctcacccatggcagacat 31177048
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>gb|AC105915.5| Homo sapiens BAC clone RP11-69D13 from 4, complete sequence
          Length = 178734

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 301    ccaaatccttccccccagcaa 321
              |||||||||||||||||||||
Sbjct: 161706 ccaaatccttccccccagcaa 161726
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>dbj|AK121592.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033038B14, full
           insert sequence
          Length = 838

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 258 gcgcagatctgctcctnccccatggccgacat 289
           ||||||||||||||||  |||||||| |||||
Sbjct: 538 gcgcagatctgctcctcacccatggcagacat 507
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>dbj|AK060387.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-009-G06, full
           insert sequence
          Length = 947

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 258 gcgcagatctgctcctnccccatggccgacat 289
           ||||||||||||||||  |||||||| |||||
Sbjct: 544 gcgcagatctgctcctcacccatggcagacat 513
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>gb|AY103556.1| Zea mays PCO150862 mRNA sequence
          Length = 966

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 45/54 (83%)
 Strand = Plus / Minus

                                                                 
Query: 227 aggaagntacctggngccgacgtccttgactgcgcagatctgctcctnccccat 280
           |||||| ||| ||| ||| || ||||| |  |||||||||||||||| ||||||
Sbjct: 676 aggaagttacttggggccaacatccttcagcgcgcagatctgctcctcccccat 623
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>gb|DQ234392.1| Thinopyrum intermedium translation initiation factor 5A mRNA,
           complete cds
          Length = 636

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 91/116 (78%)
 Strand = Plus / Minus

                                                                       
Query: 243 ccgacgtccttgactgcgcagatctgctcctnccccatggccgacatgacagncagcgcc 302
           ||||| ||||| || ||||||||||| || |  |||||||| ||||| |||| |||   |
Sbjct: 528 ccgacttccttcacagcgcagatctgttcttcacccatggcggacatcacagacaggatc 469

                                                                   
Query: 303 aaatccttccccccagcaaatncatccttganctgggtcaggatagcatcatcagt 358
           |  ||||| ||  |||||||| || |||||| |||||  || | ||||||||||||
Sbjct: 468 aggtccttgccatcagcaaatccagccttgatctgggcaagcagagcatcatcagt 413
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>gb|BT016590.1| Zea mays clone Contig423 mRNA sequence
          Length = 945

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 258 gcgcagatctgctcctnccccat 280
           |||||||||||||||| ||||||
Sbjct: 630 gcgcagatctgctcctcccccat 608
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>gb|BT017712.1| Zea mays clone EL01N0446G03.c mRNA sequence
          Length = 800

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 258 gcgcagatctgctcctnccccat 280
           |||||||||||||||| ||||||
Sbjct: 518 gcgcagatctgctcctcccccat 496
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>emb|AL360002.5| Human DNA sequence from clone RP11-192B4 on chromosome 1, complete
             sequence
          Length = 61404

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 164   ctttctttagcttaaatttg 183
             ||||||||||||||||||||
Sbjct: 29483 ctttctttagcttaaatttg 29502
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>gb|AF034943.1|AF034943 Zea mays translation initiation factor 5A (TIF5A) mRNA, complete
           cds
          Length = 831

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 258 gcgcagatctgctcctnccccat 280
           |||||||||||||||| ||||||
Sbjct: 523 gcgcagatctgctcctcccccat 501


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,925,445
Number of Sequences: 3902068
Number of extensions: 1925445
Number of successful extensions: 30749
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 30651
Number of HSP's gapped (non-prelim): 104
length of query: 359
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 337
effective length of database: 17,147,199,772
effective search space: 5778606323164
effective search space used: 5778606323164
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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