ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal3o11 |
|---|---|
| Clone Library Name | barley_pub |
>TABA_PSESZ (P31851) Protein tabA| Length = 420 Score = 90.9 bits (224), Expect = 3e-18 Identities = 46/100 (46%), Positives = 62/100 (62%) Frame = -3 Query: 619 LIRPSLYXAYQHIELVSPSPGAEVATFDIVGPVCESADFLGKDRELPTPDKGAGLVVHDA 440 L+RP LY AY H+ L E FD+VG +CE+ D DR LP+P G ++HD Sbjct: 303 LMRPGLYGAYHHLTLPFADQRPE-GVFDVVGALCENFDKFAVDRLLPSPLIGDLALIHDT 361 Query: 439 GAYCMSMASTYNLKMRPAEYWVEDDGSIVKIRHGETFDDY 320 GA+ +M TYN ++RPAE + DDG +V+IR ETFDD+ Sbjct: 362 GAHGHAMGFTYNGRLRPAELMLTDDGDVVEIRRAETFDDH 401
>DCDA_AQUAE (O67262) Diaminopimelate decarboxylase (EC 4.1.1.20) (DAP| decarboxylase) Length = 420 Score = 82.4 bits (202), Expect = 1e-15 Identities = 47/98 (47%), Positives = 60/98 (61%) Frame = -3 Query: 619 LIRPSLYXAYQHIELVSPSPGAEVATFDIVGPVCESADFLGKDRELPTPDKGAGLVVHDA 440 LIRPS+Y AY HI V +V DIVGP+CE+ DFL DRE+ +G L V A Sbjct: 316 LIRPSIYNAYHHIIPVETKERKKVVA-DIVGPICETGDFLALDREIEEVQRGEYLAVLSA 374 Query: 439 GAYCMSMASTYNLKMRPAEYWVEDDGSIVKIRHGETFD 326 GAY +M+S YN++ R AE VE +GS+ IR E +D Sbjct: 375 GAYGFAMSSHYNMRPRAAEVLVE-NGSVKLIRKRENYD 411
>DCDA_NEIMA (Q9JWA6) Diaminopimelate decarboxylase (EC 4.1.1.20) (DAP| decarboxylase) Length = 406 Score = 82.0 bits (201), Expect = 1e-15 Identities = 49/101 (48%), Positives = 62/101 (61%) Frame = -3 Query: 619 LIRPSLYXAYQHIELVSPSPGAEVATFDIVGPVCESADFLGKDRELPTPDKGAGLVVHDA 440 L+RP+LY AY HIE V P A + T +IVGP+CE+ DFLGKDR + ++G L++ A Sbjct: 302 LMRPALYDAYHHIEAVEPKNIAPL-TANIVGPICETGDFLGKDRTIAC-EEGDLLLIRSA 359 Query: 439 GAYCMSMASTYNLKMRPAEYWVEDDGSIVKIRHGETFDDYM 317 GAY SMAS YN + R AE V D IR ET + M Sbjct: 360 GAYGASMASNYNARNRAAEVLV-DGNEYRLIRRRETLEQQM 399
>DCDA_THEMA (Q9X1K5) Diaminopimelate decarboxylase (EC 4.1.1.20) (DAP| decarboxylase) Length = 386 Score = 81.3 bits (199), Expect = 2e-15 Identities = 47/102 (46%), Positives = 60/102 (58%) Frame = -3 Query: 619 LIRPSLYXAYQHIELVSPSPGAEVATFDIVGPVCESADFLGKDRELPTPDKGAGLVVHDA 440 LIRP+LY AY I V G E+ D+VGP+CES D + DRELP + G + V +A Sbjct: 283 LIRPALYSAYHRI-FVLGKQGKEMRA-DVVGPLCESGDVIAYDRELPEVEPGDIIAVENA 340 Query: 439 GAYCMSMASTYNLKMRPAEYWVEDDGSIVKIRHGETFDDYMK 314 GAY +M++ YN RPAE V ++G I IR ET D K Sbjct: 341 GAYGYTMSNNYNSTTRPAEVLVRENGRISLIRRRETEMDIFK 382
>DCDA_METTH (O27390) Diaminopimelate decarboxylase (EC 4.1.1.20) (DAP| decarboxylase) Length = 428 Score = 80.5 bits (197), Expect = 4e-15 Identities = 44/103 (42%), Positives = 64/103 (62%), Gaps = 1/103 (0%) Frame = -3 Query: 619 LIRPSLYXAYQHIELVSPSPGAEVA-TFDIVGPVCESADFLGKDRELPTPDKGAGLVVHD 443 L+RP++Y +Y HI LV+ P E + D+ G VCES D +DR+LP ++G L + + Sbjct: 317 LLRPAMYGSYHHI-LVAERPLDEPSEKMDVAGNVCESGDLFARDRQLPEINEGDVLAIMN 375 Query: 442 AGAYCMSMASTYNLKMRPAEYWVEDDGSIVKIRHGETFDDYMK 314 AGAY SM+S YN + RPAE V +G + +R ETF D ++ Sbjct: 376 AGAYSFSMSSQYNSRPRPAEVLVR-EGKVDVVRERETFSDLLR 417
>DCDA_NEIMB (Q9JXM2) Diaminopimelate decarboxylase (EC 4.1.1.20) (DAP| decarboxylase) Length = 414 Score = 79.3 bits (194), Expect = 8e-15 Identities = 48/101 (47%), Positives = 61/101 (60%) Frame = -3 Query: 619 LIRPSLYXAYQHIELVSPSPGAEVATFDIVGPVCESADFLGKDRELPTPDKGAGLVVHDA 440 L+RP+LY AY HIE V A + T +IVGP+CE+ DFLGKDR + ++G L++ A Sbjct: 302 LMRPALYDAYHHIEAVETKDIATL-TANIVGPICETGDFLGKDRTIAC-EEGDLLLIRSA 359 Query: 439 GAYCMSMASTYNLKMRPAEYWVEDDGSIVKIRHGETFDDYM 317 GAY SMAS YN + R AE V D IR ET + M Sbjct: 360 GAYGASMASNYNARNRAAEVLV-DGNEYRLIRRRETLEQQM 399
>DCDA_HELPY (P56129) Diaminopimelate decarboxylase (EC 4.1.1.20) (DAP| decarboxylase) Length = 405 Score = 79.0 bits (193), Expect = 1e-14 Identities = 44/98 (44%), Positives = 58/98 (59%) Frame = -3 Query: 616 IRPSLYXAYQHIELVSPSPGAEVATFDIVGPVCESADFLGKDRELPTPDKGAGLVVHDAG 437 +RPSLY A I +++PS G E++ D+VGPVCES+D KD LP + G LV+ G Sbjct: 297 LRPSLYHAKHAIRVITPSKGREISPCDVVGPVCESSDTFLKDAHLPELEPGDKLVIEKVG 356 Query: 436 AYCMSMASTYNLKMRPAEYWVEDDGSIVKIRHGETFDD 323 AY SMAS YN + + E +ED I IR E +D Sbjct: 357 AYGSSMASQYNSRPKLLELALEDH-KIRVIRKREALED 393
>DCDA_HAEIN (P44316) Diaminopimelate decarboxylase (EC 4.1.1.20) (DAP| decarboxylase) Length = 415 Score = 77.8 bits (190), Expect = 2e-14 Identities = 45/99 (45%), Positives = 61/99 (61%) Frame = -3 Query: 619 LIRPSLYXAYQHIELVSPSPGAEVATFDIVGPVCESADFLGKDRELPTPDKGAGLVVHDA 440 +IRP+LY AY +I + + E A +D+VGPVCE++DFLGK REL + G + A Sbjct: 311 MIRPALYEAYMNIVEIDRTLEREKAIYDVVGPVCETSDFLGKQRELSIAE-GDYIAQCSA 369 Query: 439 GAYCMSMASTYNLKMRPAEYWVEDDGSIVKIRHGETFDD 323 GAY SM+S YN + R AE V+ D S + IR ET + Sbjct: 370 GAYGASMSSNYNSRARTAEVLVDGDQSYL-IRRRETLQE 407
>DCDA_VIBCH (Q9KVL7) Diaminopimelate decarboxylase (EC 4.1.1.20) (DAP| decarboxylase) Length = 417 Score = 76.6 bits (187), Expect = 5e-14 Identities = 42/83 (50%), Positives = 56/83 (67%) Frame = -3 Query: 619 LIRPSLYXAYQHIELVSPSPGAEVATFDIVGPVCESADFLGKDRELPTPDKGAGLVVHDA 440 LIRP+LY A+Q I + P G E T+D+VGPVCE++DFLGKDR+L +G L V + Sbjct: 312 LIRPALYQAWQDIIPLRPRQG-EAQTYDLVGPVCETSDFLGKDRDL-VLQEGDLLAVRSS 369 Query: 439 GAYCMSMASTYNLKMRPAEYWVE 371 GAY +M+S YN + R AE V+ Sbjct: 370 GAYGFTMSSNYNTRPRVAEVMVD 392
>DCDA_HELPJ (Q9ZME5) Diaminopimelate decarboxylase (EC 4.1.1.20) (DAP| decarboxylase) Length = 405 Score = 75.1 bits (183), Expect = 2e-13 Identities = 42/98 (42%), Positives = 56/98 (57%) Frame = -3 Query: 616 IRPSLYXAYQHIELVSPSPGAEVATFDIVGPVCESADFLGKDRELPTPDKGAGLVVHDAG 437 +RPSLY A I +++P G E++ D+VGPVCES+D KD LP + G L + G Sbjct: 297 LRPSLYHAKHAIRVITPCGGREISPCDVVGPVCESSDTFLKDANLPELEPGDKLAIEKVG 356 Query: 436 AYCMSMASTYNLKMRPAEYWVEDDGSIVKIRHGETFDD 323 AY SMAS YN + + E +ED I IR E +D Sbjct: 357 AYGSSMASQYNSRPKLLELALEDH-KIRVIRKREALED 393
>DCDA_PSEFL (O05321) Diaminopimelate decarboxylase (EC 4.1.1.20) (DAP| decarboxylase) Length = 416 Score = 74.7 bits (182), Expect = 2e-13 Identities = 44/96 (45%), Positives = 59/96 (61%) Frame = -3 Query: 619 LIRPSLYXAYQHIELVSPSPGAEVATFDIVGPVCESADFLGKDRELPTPDKGAGLVVHDA 440 LIRP+LY A+ + V P A ++DIVGP+CE+ DFL K REL ++G L VH A Sbjct: 311 LIRPALYQAWMDVTAVRPRDTA-ARSYDIVGPICETGDFLAKGRELAL-EEGDLLAVHSA 368 Query: 439 GAYCMSMASTYNLKMRPAEYWVEDDGSIVKIRHGET 332 GAY M+S YN + R AE V+ D + ++R ET Sbjct: 369 GAYGFVMSSNYNTRGRCAEVLVDGDQAF-EVRRRET 403
>DCDA_CAMJE (Q9PII5) Diaminopimelate decarboxylase (EC 4.1.1.20) (DAP| decarboxylase) Length = 402 Score = 73.9 bits (180), Expect = 3e-13 Identities = 41/99 (41%), Positives = 57/99 (57%) Frame = -3 Query: 619 LIRPSLYXAYQHIELVSPSPGAEVATFDIVGPVCESADFLGKDRELPTPDKGAGLVVHDA 440 LIRPSLY AY E++ P E + D+VG +CES DF K R LP+ +V+ + Sbjct: 296 LIRPSLYEAYH--EIILPYNQGEESLCDVVGGICESGDFFAKARSLPSTQSDDIMVIKNT 353 Query: 439 GAYCMSMASTYNLKMRPAEYWVEDDGSIVKIRHGETFDD 323 GAY SM+S YN + + E +E +G + IR E F+D Sbjct: 354 GAYGFSMSSNYNTRNKVCELALE-EGQVRLIRQRENFED 391
>DCDA_ARCFU (O29458) Diaminopimelate decarboxylase (EC 4.1.1.20) (DAP| decarboxylase) Length = 419 Score = 72.0 bits (175), Expect = 1e-12 Identities = 39/102 (38%), Positives = 58/102 (56%) Frame = -3 Query: 619 LIRPSLYXAYQHIELVSPSPGAEVATFDIVGPVCESADFLGKDRELPTPDKGAGLVVHDA 440 LIRP++Y +Y + + + + +VGP+CES D L +DR+LP + G + V DA Sbjct: 310 LIRPAMYGSYHRVAVANKMDAEPEEVYTVVGPICESGDVLARDRKLPKVEVGDLIAVFDA 369 Query: 439 GAYCMSMASTYNLKMRPAEYWVEDDGSIVKIRHGETFDDYMK 314 GAY M+S YN + R AE V D V IR E++ D ++ Sbjct: 370 GAYGFVMSSQYNGRPRCAEVLVSGDRWDV-IREKESYGDLIE 410
>DCDA_PSEAE (P19572) Diaminopimelate decarboxylase (EC 4.1.1.20) (DAP| decarboxylase) Length = 415 Score = 70.9 bits (172), Expect = 3e-12 Identities = 42/99 (42%), Positives = 57/99 (57%) Frame = -3 Query: 619 LIRPSLYXAYQHIELVSPSPGAEVATFDIVGPVCESADFLGKDRELPTPDKGAGLVVHDA 440 LIRP+LY A+ ++ V P A +D+VGP+CE+ DFL KDR+L + G L V A Sbjct: 310 LIRPALYQAWMDVQAVRPRDAAP-RRYDLVGPICETGDFLAKDRDLALAE-GDLLAVRSA 367 Query: 439 GAYCMSMASTYNLKMRPAEYWVEDDGSIVKIRHGETFDD 323 GAY M+S YN + R AE V D ++R ET + Sbjct: 368 GAYGFVMSSNYNTRGRAAEVLV-DGEQTHEVRRRETVQE 405
>DCDA_ZYMMO (Q9Z661) Diaminopimelate decarboxylase (EC 4.1.1.20) (DAP| decarboxylase) Length = 421 Score = 67.4 bits (163), Expect = 3e-11 Identities = 39/102 (38%), Positives = 58/102 (56%) Frame = -3 Query: 619 LIRPSLYXAYQHIELVSPSPGAEVATFDIVGPVCESADFLGKDRELPTPDKGAGLVVHDA 440 L+RP+LY AY I+ V+PS A+ DIVGPVCE+ D ++R + + + A Sbjct: 315 LVRPTLYDAYHEIKAVTPS--AQTYQADIVGPVCETGDIFARNRSISAVKADDLMAIMSA 372 Query: 439 GAYCMSMASTYNLKMRPAEYWVEDDGSIVKIRHGETFDDYMK 314 GAY +MAS YN + AE V + S + IR ++ +D M+ Sbjct: 373 GAYGATMASAYNSRPLVAEVMVSGNKSAL-IRKRQSVEDLMR 413
>DCDA_METJA (Q58497) Diaminopimelate decarboxylase (EC 4.1.1.20) (DAP| decarboxylase) Length = 438 Score = 67.0 bits (162), Expect = 4e-11 Identities = 39/99 (39%), Positives = 54/99 (54%) Frame = -3 Query: 619 LIRPSLYXAYQHIELVSPSPGAEVATFDIVGPVCESADFLGKDRELPTPDKGAGLVVHDA 440 ++RP++Y AY HI EV + I G +CES+D G+DREL + G L + D Sbjct: 331 MMRPAMYEAYHHIINCKVKNEKEVVS--IAGGLCESSDVFGRDRELDKVEVGDVLAIFDV 388 Query: 439 GAYCMSMASTYNLKMRPAEYWVEDDGSIVKIRHGETFDD 323 GAY +SMA+ YN + RP G + IR ET+ D Sbjct: 389 GAYGISMANNYNARGRPRMVLTSKKG-VFLIRERETYAD 426
>DCDA_DEIRA (Q9RTK2) Diaminopimelate decarboxylase (EC 4.1.1.20) (DAP| decarboxylase) Length = 379 Score = 64.3 bits (155), Expect = 3e-10 Identities = 36/92 (39%), Positives = 53/92 (57%), Gaps = 1/92 (1%) Frame = -3 Query: 616 IRPSLYXAYQHIELVSPSPGAEVATFDIVGPVCESADFLGKDRELPTPDKGAGLVVHDAG 437 +RP LY A + + + EV +D+ GP CES D + + LPTP +G L++ +AG Sbjct: 279 LRPMLYGASHPLYPMWDALATEV--WDVAGPACESGDLIARGVPLPTPQRGHLLLIGEAG 336 Query: 436 AYCMSMASTYNLKMRPAE-YWVEDDGSIVKIR 344 AY SM+STY + RPAE W D +++ R Sbjct: 337 AYGASMSSTYLSRPRPAEVLWTGHDWQLLRRR 368
>DCDA_BUCAI (P57513) Diaminopimelate decarboxylase (EC 4.1.1.20) (DAP| decarboxylase) Length = 415 Score = 59.3 bits (142), Expect = 9e-09 Identities = 41/112 (36%), Positives = 62/112 (55%), Gaps = 11/112 (9%) Frame = -3 Query: 619 LIRPSLYXAYQHIELVSPSPGA--EVATFDIV--GPVCESAD-FLGKD------RELPTP 473 L+RP++Y +Y HI ++ E T D V GP+CES D F K+ R+LPT Sbjct: 301 LMRPTMYGSYHHISVIYGDDRKMNEKETIDTVVAGPLCESGDIFTQKEGGTVQTRKLPTI 360 Query: 472 DKGAGLVVHDAGAYCMSMASTYNLKMRPAEYWVEDDGSIVKIRHGETFDDYM 317 G L+ HD GAY +M+S YN + E ++++ SIV IR +T ++ + Sbjct: 361 KVGDYLIFHDTGAYGAAMSSNYNTRPLIPEILLKNNDSIV-IRRRQTIEEIL 411
>DCDA_BACSU (P23630) Diaminopimelate decarboxylase (EC 4.1.1.20) (DAP| decarboxylase) Length = 441 Score = 57.8 bits (138), Expect = 3e-08 Identities = 38/101 (37%), Positives = 52/101 (51%) Frame = -3 Query: 616 IRPSLYXAYQHIELVSPSPGAEVATFDIVGPVCESADFLGKDRELPTPDKGAGLVVHDAG 437 IRP+LY A + A T I G CES D L D +LP +G L V G Sbjct: 331 IRPALYQAKYEAAAANRIGEAHDKTVSIAGKCCESGDMLIWDIDLPEVKEGDLLAVFCTG 390 Query: 436 AYCMSMASTYNLKMRPAEYWVEDDGSIVKIRHGETFDDYMK 314 AY SMA+ YN RPA +VE+ + + ++ ET++D +K Sbjct: 391 AYGYSMANNYNRIPRPAVVFVENGEAHLVVKR-ETYEDIVK 430
>DCDA_MYCLE (Q50140) Diaminopimelate decarboxylase (EC 4.1.1.20) (DAP| decarboxylase) Length = 472 Score = 57.0 bits (136), Expect = 4e-08 Identities = 41/101 (40%), Positives = 51/101 (50%), Gaps = 1/101 (0%) Frame = -3 Query: 616 IRPSLYXAYQHIELVSPSPGAEVATFDIVGPVCESADFLGKDRELPTPDKGAGLV-VHDA 440 IR +LY A + LVS + A A IVG CES D + +D +P K LV V Sbjct: 368 IRTALYDAQYDVRLVSRTSDAPAAPASIVGKHCESGDIVVRDTWVPDDLKPGDLVGVAAT 427 Query: 439 GAYCMSMASTYNLKMRPAEYWVEDDGSIVKIRHGETFDDYM 317 GAYC S++S YN+ RPA V G I ET DD + Sbjct: 428 GAYCYSLSSRYNMLGRPAVVAV-CAGQARLILRRETVDDLL 467
>DCDA_BACMT (P41023) Diaminopimelate decarboxylase (EC 4.1.1.20) (DAP| decarboxylase) Length = 432 Score = 55.8 bits (133), Expect = 1e-07 Identities = 39/97 (40%), Positives = 46/97 (47%), Gaps = 2/97 (2%) Frame = -3 Query: 616 IRPSLYXAYQHIELVSPSPGAEVATFDIVGPVCESADFLGKDRELPTPDKGAGLVVHDAG 437 IRP+LY A L + T I G CES D L D LP D L V G Sbjct: 329 IRPALYNAKYEAVLANKPLAKADETVSIAGKCCESGDMLIWDLPLPKADSDDILAVFCTG 388 Query: 436 AYCMSMASTYNLKMRPAEYWVEDDGS--IVKIRHGET 332 AY SMA+ YN RPA +VE+ S +VK +H T Sbjct: 389 AYGYSMANNYNRIPRPAVVFVENGESMLVVKRKHMRT 425
>DCDA_MYCSM (Q9X5M1) Diaminopimelate decarboxylase (EC 4.1.1.20) (DAP| decarboxylase) Length = 474 Score = 54.3 bits (129), Expect = 3e-07 Identities = 40/101 (39%), Positives = 50/101 (49%), Gaps = 1/101 (0%) Frame = -3 Query: 616 IRPSLYXAYQHIELVSPSPGAEVATFDIVGPVCESADFLGKDRELPTPDKGAGLV-VHDA 440 IR SLY A LVS A A IVG CES D + +D + L+ V Sbjct: 368 IRTSLYAAQYDARLVSRVSDAPPALARIVGKHCESGDIVVRDTWVSDDIAPGDLIGVAAT 427 Query: 439 GAYCMSMASTYNLKMRPAEYWVEDDGSIVKIRHGETFDDYM 317 GAYC SM+S YNL RPA V D + + +R ET +D + Sbjct: 428 GAYCYSMSSRYNLLCRPAVVAVADGQARLVLRR-ETVEDLL 467
>DCDA_BUCBP (Q89AC6) Diaminopimelate decarboxylase (EC 4.1.1.20) (DAP| decarboxylase) Length = 418 Score = 54.3 bits (129), Expect = 3e-07 Identities = 40/114 (35%), Positives = 56/114 (49%), Gaps = 12/114 (10%) Frame = -3 Query: 619 LIRPSLYXAYQHIELVSPSPGAEVATFDIV-----GPVCESADFLG-------KDRELPT 476 LIRP++Y +Y HI ++ P G V D + GP+CES D K R LP Sbjct: 301 LIRPAMYGSYHHISVI-PRDGRCVNYDDTIEAVVCGPLCESGDVFTQNEYGDIKTRILPN 359 Query: 475 PDKGAGLVVHDAGAYCMSMASTYNLKMRPAEYWVEDDGSIVKIRHGETFDDYMK 314 G LV HD GAY SM+S YN + E +D+ + IR +T + ++ Sbjct: 360 VQIGDFLVFHDTGAYGASMSSNYNSRPLIPEILFKDNEFHI-IRRRQTMKELLE 412
>DCDA_ECOLI (P00861) Diaminopimelate decarboxylase (EC 4.1.1.20) (DAP| decarboxylase) Length = 420 Score = 53.9 bits (128), Expect = 4e-07 Identities = 36/112 (32%), Positives = 54/112 (48%), Gaps = 11/112 (9%) Frame = -3 Query: 619 LIRPSLYXAYQHIELVSPS----PGAEVATFDIVGPVCESADFLGKD-------RELPTP 473 L+RP++Y +Y HI ++ A + GP+CES D + R LP Sbjct: 305 LMRPAMYGSYHHISALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEV 364 Query: 472 DKGAGLVVHDAGAYCMSMASTYNLKMRPAEYWVEDDGSIVKIRHGETFDDYM 317 G LV+HD GAY SM+S YN + E + D+G IR +T ++ + Sbjct: 365 KAGDYLVLHDTGAYGASMSSNYNSRPLLPEV-LFDNGQARLIRRRQTIEELL 415
>DCDA_MYCTU (P0A5M4) Diaminopimelate decarboxylase (EC 4.1.1.20) (DAP| decarboxylase) Length = 447 Score = 53.9 bits (128), Expect = 4e-07 Identities = 37/101 (36%), Positives = 51/101 (50%), Gaps = 1/101 (0%) Frame = -3 Query: 616 IRPSLYXAYQHIELVSPSPGAEVATFDIVGPVCESADFLGKDRELPTPDKGAGLV-VHDA 440 IR +LY A + LVS A +VG CES D + +D +P + LV V Sbjct: 343 IRTALYGAQYDVRLVSRVSDAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLVAVAAT 402 Query: 439 GAYCMSMASTYNLKMRPAEYWVEDDGSIVKIRHGETFDDYM 317 GAYC S++S YN+ RPA V + + +R ET DD + Sbjct: 403 GAYCYSLSSRYNMVGRPAVVAVHAGNARLVLRR-ETVDDLL 442
>DCDA_MYCBO (P0A5M5) Diaminopimelate decarboxylase (EC 4.1.1.20) (DAP| decarboxylase) Length = 447 Score = 53.9 bits (128), Expect = 4e-07 Identities = 37/101 (36%), Positives = 51/101 (50%), Gaps = 1/101 (0%) Frame = -3 Query: 616 IRPSLYXAYQHIELVSPSPGAEVATFDIVGPVCESADFLGKDRELPTPDKGAGLV-VHDA 440 IR +LY A + LVS A +VG CES D + +D +P + LV V Sbjct: 343 IRTALYGAQYDVRLVSRVSDAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLVAVAAT 402 Query: 439 GAYCMSMASTYNLKMRPAEYWVEDDGSIVKIRHGETFDDYM 317 GAYC S++S YN+ RPA V + + +R ET DD + Sbjct: 403 GAYCYSLSSRYNMVGRPAVVAVHAGNARLVLRR-ETVDDLL 442
>DCDA_SYNY3 (Q55484) Diaminopimelate decarboxylase (EC 4.1.1.20) (DAP| decarboxylase) Length = 469 Score = 53.9 bits (128), Expect = 4e-07 Identities = 36/100 (36%), Positives = 46/100 (46%) Frame = -3 Query: 613 RPSLYXAYQHIELVSPSPGAEVATFDIVGPVCESADFLGKDRELPTPDKGAGLVVHDAGA 434 RP Y + + L + T + G CES D L KD LP + G +VV GA Sbjct: 361 RPITYQSVYRVALANRMNDEITETVTVAGKHCESGDILVKDVALPAAEPGDIMVVAATGA 420 Query: 433 YCMSMASTYNLKMRPAEYWVEDDGSIVKIRHGETFDDYMK 314 Y SMAS YN RPA V + G I ET+ D ++ Sbjct: 421 YNHSMASNYNRLGRPAAVLV-NQGQANLILQRETYTDLLR 459
>DCDA_BUCAP (Q8K9C4) Diaminopimelate decarboxylase (EC 4.1.1.20) (DAP| decarboxylase) Length = 415 Score = 53.9 bits (128), Expect = 4e-07 Identities = 35/96 (36%), Positives = 52/96 (54%), Gaps = 11/96 (11%) Frame = -3 Query: 619 LIRPSLYXAYQHIELVSPSPGA--EVATFDIV--GPVCESAD-FLGKD------RELPTP 473 L+RP++Y +Y H+ +V+ E T D + GP+CES D F K+ R+LP Sbjct: 301 LMRPTMYGSYHHVSVVTKDDRNIHETETIDTIIGGPLCESGDIFTQKEGGNITTRKLPIL 360 Query: 472 DKGAGLVVHDAGAYCMSMASTYNLKMRPAEYWVEDD 365 G L+ HD GAY SM+S YN + E +E++ Sbjct: 361 KIGDYLIFHDVGAYGASMSSNYNTRPLIQEILLENN 396
>DCDA_CORGL (P09890) Diaminopimelate decarboxylase (EC 4.1.1.20) (DAP| decarboxylase) Length = 445 Score = 53.5 bits (127), Expect = 5e-07 Identities = 37/101 (36%), Positives = 49/101 (48%), Gaps = 1/101 (0%) Frame = -3 Query: 616 IRPSLYXAYQHIELVSPSPGAEVATFDIVGPVCESADFLGKDRELPTP-DKGAGLVVHDA 440 IRP+LY + +VS + + IVG CES D L D P+ G L + Sbjct: 342 IRPALYGSEYDARVVSRFAEGDPVSTRIVGSHCESGDILINDEIYPSDITSGDFLALAAT 401 Query: 439 GAYCMSMASTYNLKMRPAEYWVEDDGSIVKIRHGETFDDYM 317 GAYC +M+S YN RPA V S + +R ET DD + Sbjct: 402 GAYCYAMSSRYNAFTRPAVVSVRAGSSRLMLRR-ETLDDIL 441
>DCDA_COREF (Q8RQM6) Diaminopimelate decarboxylase (EC 4.1.1.20) (DAP| decarboxylase) Length = 459 Score = 52.8 bits (125), Expect = 8e-07 Identities = 36/101 (35%), Positives = 48/101 (47%), Gaps = 1/101 (0%) Frame = -3 Query: 616 IRPSLYXAYQHIELVSPSPGAEVATFDIVGPVCESADFLGKDRELPTP-DKGAGLVVHDA 440 IRP+LY A +VS E +VG CES D L + P+ G L + Sbjct: 356 IRPALYGAEYDARVVSRFTEGETTNTRVVGSHCESGDILINEATYPSDIHTGDLLALAAT 415 Query: 439 GAYCMSMASTYNLKMRPAEYWVEDDGSIVKIRHGETFDDYM 317 GAYC +M+S YN RPA V + + +R ET DD + Sbjct: 416 GAYCYAMSSRYNAFARPAVVSVRAGAAKLMLRR-ETLDDIL 455
>DCDA_BACHD (Q9KCM5) Diaminopimelate decarboxylase (EC 4.1.1.20) (DAP| decarboxylase) Length = 439 Score = 52.0 bits (123), Expect = 1e-06 Identities = 35/101 (34%), Positives = 49/101 (48%) Frame = -3 Query: 616 IRPSLYXAYQHIELVSPSPGAEVATFDIVGPVCESADFLGKDRELPTPDKGAGLVVHDAG 437 +RP+LY A L + V F + G CES D L D LP + L V G Sbjct: 329 LRPALYQAEYEGALANRVNEQPVGMFSVAGKCCESGDMLIWDLPLPEANHEDILAVFCTG 388 Query: 436 AYCMSMASTYNLKMRPAEYWVEDDGSIVKIRHGETFDDYMK 314 AY SMA+ YN RP +VED + + I+ E ++D ++ Sbjct: 389 AYGYSMANNYNRIPRPPVVFVEDGDAQLVIQR-ERYEDLVR 428
>DCDA_ACTPA (O69203) Diaminopimelate decarboxylase (EC 4.1.1.20) (DAP| decarboxylase) Length = 437 Score = 46.6 bits (109), Expect = 6e-05 Identities = 38/102 (37%), Positives = 51/102 (50%), Gaps = 2/102 (1%) Frame = -3 Query: 613 RPSLYXAYQHIELVSPSPGAEVATFDIVGPVCESADFLGKDRELPTPDKGAG--LVVHDA 440 RP+LY + + LV G A +VG CE+ D L +D LP D AG L V Sbjct: 337 RPALYGSRYAVRLVRR--GGRRAPVTVVGRHCEAGDVLAEDVPLPE-DVRAGDLLAVPVT 393 Query: 439 GAYCMSMASTYNLKMRPAEYWVEDDGSIVKIRHGETFDDYMK 314 GAY ++AS YN RP V D + V +R ET +D ++ Sbjct: 394 GAYHHALASNYNAVGRPPVVGVRDGVARVLVRR-ETEEDLLR 434
>DCDA_STRCO (Q9ZBH5) Diaminopimelate decarboxylase (EC 4.1.1.20) (DAP| decarboxylase) Length = 440 Score = 45.8 bits (107), Expect = 1e-04 Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 10/82 (12%) Frame = -3 Query: 619 LIRPSLYXAYQHIELVSP--SPGAEVATFDIV-GPVCESADFL----GKDRE---LPTPD 470 L+RP++Y + + ++ +P A A ++ GP+CES D G D E +P D Sbjct: 312 LMRPAMYGSNHRVSVLDADGAPRASDARDTVLAGPLCESGDVFTQVEGGDVEPVPVPRTD 371 Query: 469 KGAGLVVHDAGAYCMSMASTYN 404 G +V HD GAY SM+STYN Sbjct: 372 VGDLVVFHDTGAYGASMSSTYN 393
>DCOR1_XENLA (P27120) Ornithine decarboxylase 1 (EC 4.1.1.17) (ODC 1) (xODC1)| Length = 460 Score = 42.7 bits (99), Expect = 9e-04 Identities = 22/65 (33%), Positives = 34/65 (52%) Frame = -3 Query: 568 PSPGAEVATFDIVGPVCESADFLGKDRELPTPDKGAGLVVHDAGAYCMSMASTYNLKMRP 389 P P + + I GP C+ D + + ELP G ++ + GAY ++ AST+N RP Sbjct: 345 PKPDEKFYSSSIWGPTCDGLDRIVERFELPELQVGDWMLFENMGAYTVAAASTFNGFQRP 404 Query: 388 AEYWV 374 Y+V Sbjct: 405 TLYYV 409
>DCOR_HUMAN (P11926) Ornithine decarboxylase (EC 4.1.1.17) (ODC)| Length = 461 Score = 41.6 bits (96), Expect = 0.002 Identities = 21/65 (32%), Positives = 34/65 (52%) Frame = -3 Query: 568 PSPGAEVATFDIVGPVCESADFLGKDRELPTPDKGAGLVVHDAGAYCMSMASTYNLKMRP 389 P P + + I GP C+ D + + +LP G ++ + GAY ++ AST+N RP Sbjct: 344 PKPDEKYYSSSIWGPTCDGLDRIVERCDLPEMHVGDWMLFENMGAYTVAAASTFNGFQRP 403 Query: 388 AEYWV 374 Y+V Sbjct: 404 TIYYV 408
>DCOR_CRIGR (P14019) Ornithine decarboxylase (EC 4.1.1.17) (ODC)| Length = 455 Score = 41.2 bits (95), Expect = 0.002 Identities = 21/65 (32%), Positives = 34/65 (52%) Frame = -3 Query: 568 PSPGAEVATFDIVGPVCESADFLGKDRELPTPDKGAGLVVHDAGAYCMSMASTYNLKMRP 389 P P + + I GP C+ D + + LP G ++ + GAY ++ AST+N RP Sbjct: 338 PKPDEKYYSSSIWGPTCDGLDRIVERCNLPEMHVGDWMLFENMGAYTVAAASTFNGFQRP 397 Query: 388 AEYWV 374 + Y+V Sbjct: 398 SIYYV 402
>DCOR_BOVIN (P27117) Ornithine decarboxylase (EC 4.1.1.17) (ODC)| Length = 461 Score = 40.8 bits (94), Expect = 0.003 Identities = 21/65 (32%), Positives = 33/65 (50%) Frame = -3 Query: 568 PSPGAEVATFDIVGPVCESADFLGKDRELPTPDKGAGLVVHDAGAYCMSMASTYNLKMRP 389 P P + + I GP C+ D + + LP G ++ + GAY ++ AST+N RP Sbjct: 344 PKPDEKYYSSSIWGPTCDGLDRIVERCNLPEMHVGDWMLFENMGAYTVAAASTFNGFQRP 403 Query: 388 AEYWV 374 Y+V Sbjct: 404 TIYYV 408
>DCOR_RAT (P09057) Ornithine decarboxylase (EC 4.1.1.17) (ODC)| Length = 461 Score = 40.0 bits (92), Expect = 0.006 Identities = 21/65 (32%), Positives = 33/65 (50%) Frame = -3 Query: 568 PSPGAEVATFDIVGPVCESADFLGKDRELPTPDKGAGLVVHDAGAYCMSMASTYNLKMRP 389 P P + + I GP C+ D + + LP G ++ + GAY ++ AST+N RP Sbjct: 344 PKPDEKYYSSSIWGPTCDGLDRIVERCSLPEMHVGDWMLFENMGAYTVAAASTFNGFQRP 403 Query: 388 AEYWV 374 Y+V Sbjct: 404 NIYYV 408
>DCOR_MUSPA (P27119) Ornithine decarboxylase (EC 4.1.1.17) (ODC)| Length = 461 Score = 40.0 bits (92), Expect = 0.006 Identities = 21/65 (32%), Positives = 33/65 (50%) Frame = -3 Query: 568 PSPGAEVATFDIVGPVCESADFLGKDRELPTPDKGAGLVVHDAGAYCMSMASTYNLKMRP 389 P P + + I GP C+ D + + LP G ++ + GAY ++ AST+N RP Sbjct: 344 PKPDEKYYSSSIWGPTCDGLDRIVERCNLPEMHVGDWMLFENMGAYTVAAASTFNGFQRP 403 Query: 388 AEYWV 374 Y+V Sbjct: 404 NIYYV 408
>DCOR_MOUSE (P00860) Ornithine decarboxylase (EC 4.1.1.17) (ODC)| Length = 461 Score = 40.0 bits (92), Expect = 0.006 Identities = 21/65 (32%), Positives = 33/65 (50%) Frame = -3 Query: 568 PSPGAEVATFDIVGPVCESADFLGKDRELPTPDKGAGLVVHDAGAYCMSMASTYNLKMRP 389 P P + + I GP C+ D + + LP G ++ + GAY ++ AST+N RP Sbjct: 344 PKPDEKYYSSSIWGPTCDGLDRIVERCNLPEMHVGDWMLFENMGAYTVAAASTFNGFQRP 403 Query: 388 AEYWV 374 Y+V Sbjct: 404 NIYYV 408
>DCOR_CAEEL (P41931) Ornithine decarboxylase (EC 4.1.1.17) (ODC)| Length = 422 Score = 37.7 bits (86), Expect = 0.027 Identities = 20/64 (31%), Positives = 32/64 (50%) Frame = -3 Query: 535 IVGPVCESADFLGKDRELPTPDKGAGLVVHDAGAYCMSMASTYNLKMRPAEYWVEDDGSI 356 I GP C+S D + + +P + G L D GAY ++ A+T+N +P +V + Sbjct: 354 IWGPTCDSLDLVEDKKLMPKMNVGEWLYYPDMGAYTLAAATTFNGFSKPVPMYVMSEEMW 413 Query: 355 VKIR 344 IR Sbjct: 414 ESIR 417
>DCOR2_XENLA (Q9I8S4) Ornithine decarboxylase 2 (EC 4.1.1.17) (ODC 2) (xODC2)| Length = 456 Score = 37.4 bits (85), Expect = 0.036 Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 1/64 (1%) Frame = -3 Query: 568 PSPGAEVATFDIVGPVCESADFLGKDRELPTPDKGAGLVVHDAGAYCMSMASTYN-LKMR 392 PSP + T + GP C+ D + + +LP G L+ + GAY ++ +S +N + Sbjct: 341 PSPDQPLYTSSLWGPTCDGLDQIAERVQLPELHVGDWLLFENMGAYTIAASSNFNGFQQS 400 Query: 391 PAEY 380 P Y Sbjct: 401 PVHY 404
>DCOR_CHICK (P27118) Ornithine decarboxylase (EC 4.1.1.17) (ODC) (Fragment)| Length = 450 Score = 36.6 bits (83), Expect = 0.061 Identities = 19/65 (29%), Positives = 32/65 (49%) Frame = -3 Query: 568 PSPGAEVATFDIVGPVCESADFLGKDRELPTPDKGAGLVVHDAGAYCMSMASTYNLKMRP 389 P P + I GP C+ D + + +P G ++ + GAY ++ AST+N RP Sbjct: 334 PKPDDGCYSCSIWGPTCDGLDRIVERCNMPELQVGDWILFENMGAYTVAAASTFNGFQRP 393 Query: 388 AEYWV 374 ++V Sbjct: 394 TIHYV 398
>DCOR_PANRE (P49725) Ornithine decarboxylase (EC 4.1.1.17) (ODC)| Length = 435 Score = 36.6 bits (83), Expect = 0.061 Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 3/63 (4%) Frame = -3 Query: 529 GPVCESADFLGKDRELPTPDKGAGLVVHDAGAYCMSMASTYNLKMRPAEYWVEDD---GS 359 GP C+ D + + +P +G L D GAY AST+N +P Y+ D+ GS Sbjct: 365 GPTCDGLDQVEESSVMPRLYEGDWLYYPDMGAYTSVAASTFNGFDKPKTYYFIDEATLGS 424 Query: 358 IVK 350 IV+ Sbjct: 425 IVR 427
>DCOR1_DROME (P40807) Ornithine decarboxylase 1 (EC 4.1.1.17) (ODC)| Length = 394 Score = 36.2 bits (82), Expect = 0.080 Identities = 17/44 (38%), Positives = 26/44 (59%) Frame = -3 Query: 535 IVGPVCESADFLGKDRELPTPDKGAGLVVHDAGAYCMSMASTYN 404 I GP C++ D + +D LP ++G L + GAY M +AS +N Sbjct: 338 IWGPSCDALDKISEDLHLPNLNRGDLLGFRNMGAYTMPIASAFN 381
>DCOR_TRYBB (P07805) Ornithine decarboxylase (EC 4.1.1.17) (ODC)| Length = 423 Score = 35.8 bits (81), Expect = 0.10 Identities = 19/65 (29%), Positives = 30/65 (46%) Frame = -3 Query: 568 PSPGAEVATFDIVGPVCESADFLGKDRELPTPDKGAGLVVHDAGAYCMSMASTYNLKMRP 389 P P ++ + GP C+ D + + LP G L+ D GAY + S++N P Sbjct: 342 PIPNEKLYPSSVWGPTCDGLDQIVERYYLPEMQVGEWLLFEDMGAYTVVGTSSFNGFQSP 401 Query: 388 AEYWV 374 Y+V Sbjct: 402 TIYYV 406
>DCOR_SCHPO (Q9UQW9) Ornithine decarboxylase (EC 4.1.1.17) (ODC)| Length = 432 Score = 35.4 bits (80), Expect = 0.14 Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 1/45 (2%) Frame = -3 Query: 535 IVGPVCESADFLGKDRELPTP-DKGAGLVVHDAGAYCMSMASTYN 404 I GP C+S D + D LP + G + DAGAY ++ AS +N Sbjct: 372 IWGPTCDSLDVIANDAHLPYELNVGDWIYFEDAGAYTVAAASCFN 416
>DCOR_LEIDO (P27116) Ornithine decarboxylase (EC 4.1.1.17) (ODC)| Length = 707 Score = 33.1 bits (74), Expect = 0.68 Identities = 16/44 (36%), Positives = 23/44 (52%) Frame = -3 Query: 535 IVGPVCESADFLGKDRELPTPDKGAGLVVHDAGAYCMSMASTYN 404 I GP C+S D + K + P G L+V D G+Y + A +N Sbjct: 629 IFGPTCDSMDCILKKQPFPEMKLGDWLLVPDMGSYTTAAAGFFN 672
>DCOR_DATST (P50134) Ornithine decarboxylase (EC 4.1.1.17) (ODC)| Length = 431 Score = 31.6 bits (70), Expect = 2.0 Identities = 14/52 (26%), Positives = 26/52 (50%) Frame = -3 Query: 559 GAEVATFDIVGPVCESADFLGKDRELPTPDKGAGLVVHDAGAYCMSMASTYN 404 G++ + GP C++ D + +D +LP L+ + GAY + S +N Sbjct: 363 GSKTFPSTVFGPTCDALDTVLRDYQLPELQVNDWLIFPNMGAYTKAAGSNFN 414
>MEGF8_MOUSE (P60882) Multiple epidermal growth factor-like domains 8 (EGF-like| domain-containing protein 4) (Multiple EGF-like domain protein 4) Length = 2330 Score = 30.8 bits (68), Expect = 3.4 Identities = 15/39 (38%), Positives = 19/39 (48%) Frame = +1 Query: 397 SSGCRSKPCSCSRLLRHGQPNQLPCQALEAPCLCQGNLQ 513 S GCR PC C+ HG P + C L C CQ + + Sbjct: 746 SGGCR--PCQCNG---HGDPRRGHCDNLTGLCFCQDHTE 779
>MEGF8_HUMAN (Q7Z7M0) Multiple epidermal growth factor-like domains 8 (EGF-like| domain-containing protein 4) (Multiple EGF-like domain protein 4) Length = 2386 Score = 30.8 bits (68), Expect = 3.4 Identities = 15/39 (38%), Positives = 19/39 (48%) Frame = +1 Query: 397 SSGCRSKPCSCSRLLRHGQPNQLPCQALEAPCLCQGNLQ 513 S GCR PC C+ HG P + C L C CQ + + Sbjct: 746 SRGCR--PCQCNG---HGDPRRGHCDNLSGLCFCQDHTE 779
>ACCO3_CUCME (P54847) 1-aminocyclopropane-1-carboxylate oxidase 3 (EC 1.14.17.4)| (ACC oxidase 3) (Ethylene-forming enzyme) (EFE) Length = 320 Score = 29.3 bits (64), Expect = 9.8 Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 4/47 (8%) Frame = -3 Query: 427 MSMASTYN----LKMRPAEYWVEDDGSIVKIRHGETFDDYMKFFDGL 299 MS+AS YN + PA VE + K+ FDDYMK + GL Sbjct: 246 MSIASFYNPGNDAVIYPAPALVEGEQEKTKLYPKFVFDDYMKLYVGL 292 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 90,140,588 Number of Sequences: 219361 Number of extensions: 1948557 Number of successful extensions: 4524 Number of sequences better than 10.0: 52 Number of HSP's better than 10.0 without gapping: 4346 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4491 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5653129581 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
