>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 300     gcatcgatttcgatccgaag 319
               ||||||||||||||||||||
Sbjct: 2482112 gcatcgatttcgatccgaag 2482093

>gb|AC149762.2| Bos taurus  BAC CH240-123C23 (Children's Hospital Oakland Research
              Institute Bovine BAC Library (male)) complete sequence
          Length = 187366

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 276    ccagcttgaggtgctcaaga 295
              ||||||||||||||||||||
Sbjct: 132286 ccagcttgaggtgctcaaga 132305

>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 300     gcatcgatttcgatccgaag 319
               ||||||||||||||||||||
Sbjct: 3703502 gcatcgatttcgatccgaag 3703521

>gb|DQ404379.1| Haemophilus sp. COAD165 RecA (recA) gene, partial cds
          Length = 426

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 230 cagatgattcaggccagaaaattt 253
           ||||||||||||||| ||||||||
Sbjct: 97  cagatgattcaggcccgaaaattt 74

>gb|DQ404378.1| Haemophilus sp. COAD036 RecA (recA) gene, partial cds
          Length = 426

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 230 cagatgattcaggccagaaaattt 253
           ||||||||||||||| ||||||||
Sbjct: 97  cagatgattcaggcccgaaaattt 74

>gb|AY386264.1| Orf virus strain OV-SA00, complete genome
          Length = 139962

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 19    ttggacgcacagtctgtttt 38
             ||||||||||||||||||||
Sbjct: 78445 ttggacgcacagtctgtttt 78464

>gb|AY386263.1| Orf virus strain OV-IA82, complete genome
          Length = 137241

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 19    ttggacgcacagtctgtttt 38
             ||||||||||||||||||||
Sbjct: 77310 ttggacgcacagtctgtttt 77329

>emb|CT005239.3| Pan troglodytes chromosome X clone PTB-125H24 map Xq28, complete sequence
          Length = 262483

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 206    aagcaagacttccttgaccc 225
              ||||||||||||||||||||
Sbjct: 154641 aagcaagacttccttgaccc 154660

>gb|AC111155.11| Homo sapiens chromosome 17, clone CTD-2327L2, complete sequence
          Length = 32601

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 225  ccaaacagatgattcaggcc 244
            ||||||||||||||||||||
Sbjct: 8078 ccaaacagatgattcaggcc 8097

>emb|AL391139.19| Human DNA sequence from clone RP11-353K22 on chromosome X Contains the
             gene for a novel GTPase and two CpG islands, complete
             sequence
          Length = 128899

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 206   aagcaagacttccttgaccc 225
             ||||||||||||||||||||
Sbjct: 48689 aagcaagacttccttgaccc 48670

>emb|AL355273.30| Human DNA sequence from clone RP11-714M16 on chromosome 10 Contains the
             3' end of the GPRK5 gene for G protein-coupled receptor
             kinase 5 (GRK5) and the RGS10 gene for regulator of
             G-protein signalling 10, complete sequence
          Length = 153108

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 509   cccaggtccagcttcgtgagcttg 532
             |||||| |||||||||||||||||
Sbjct: 72098 cccagggccagcttcgtgagcttg 72121

>gb|AC131386.2| Homo sapiens chromosome 5 clone CTD-3179P9, complete sequence
          Length = 169076

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 390  ctcctccacaattttcagca 409
            ||||||||||||||||||||
Sbjct: 8748 ctcctccacaattttcagca 8729

>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 300     gcatcgatttcgatccgaag 319
               ||||||||||||||||||||
Sbjct: 3443815 gcatcgatttcgatccgaag 3443834

>emb|AJ585319.1| Haemophilus haemolyticus partial recA gene for recombinase A,
           strain HK676
          Length = 447

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 230 cagatgattcaggccagaaaattt 253
           ||||||||||||||| ||||||||
Sbjct: 103 cagatgattcaggcccgaaaattt 80

>emb|AJ585318.1| Haemophilus haemolyticus partial recA gene for recombinase A,
           strain HK386
          Length = 447

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 230 cagatgattcaggccagaaaattt 253
           ||||||||||||||| ||||||||
Sbjct: 103 cagatgattcaggcccgaaaattt 80

>gb|AC113344.2| Homo sapiens chromosome 5 clone CTD-2382P15, complete sequence
          Length = 128990

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 390   ctcctccacaattttcagca 409
             ||||||||||||||||||||
Sbjct: 88778 ctcctccacaattttcagca 88759

>dbj|AP007150.1| Aspergillus oryzae RIB40 genomic DNA, SC009
          Length = 1913118

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 439     aagtcgcagaatacgaagct 458
               ||||||||||||||||||||
Sbjct: 1445337 aagtcgcagaatacgaagct 1445318

>gb|AC011921.14| Homo sapiens chromosome 17, clone RP11-15E18, complete sequence
          Length = 153922

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 225    ccaaacagatgattcaggcc 244
              ||||||||||||||||||||
Sbjct: 149654 ccaaacagatgattcaggcc 149673

>gb|AC004840.4| Homo sapiens PAC clone RP4-607J2 from 7, complete sequence
          Length = 149397

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 500   gcagccattcccaggtccagcttc 523
             ||||||||||||| ||||||||||
Sbjct: 40812 gcagccattcccaagtccagcttc 40789

>gb|DQ184476.1| Orf virus strain NZ2, complete genome
          Length = 137820

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 19    ttggacgcacagtctgtttt 38
             ||||||||||||||||||||
Sbjct: 77682 ttggacgcacagtctgtttt 77701

>gb|AY027530.1| Burkholderia pseudomallei paraquat-inducible protein (LPW206-207)
            gene, complete cds
          Length = 1662

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 300  gcatcgatttcgatccgaag 319
            ||||||||||||||||||||
Sbjct: 1031 gcatcgatttcgatccgaag 1050

>dbj|AP003783.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-598K3, complete
              sequence
          Length = 172763

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 467    ctagcaaggtgctccatgtc 486
              ||||||||||||||||||||
Sbjct: 156603 ctagcaaggtgctccatgtc 156622

>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 300     gcatcgatttcgatccgaag 319
               ||||||||||||||||||||
Sbjct: 1417613 gcatcgatttcgatccgaag 1417594

>emb|CR352262.23| Zebrafish DNA sequence from clone DKEY-39F23 in linkage group 24,
              complete sequence
          Length = 223466

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 630    caagcaatcttcattgtccttgtc 653
              ||||||| ||||||||||||||||
Sbjct: 128404 caagcaaacttcattgtccttgtc 128381

>gb|AC142106.4| Mus musculus BAC clone RP24-180L10 from 1, complete sequence
          Length = 194634

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 386    tcctctcctccacaattttc 405
              ||||||||||||||||||||
Sbjct: 152669 tcctctcctccacaattttc 152650

>gb|AC140367.3| Mus musculus BAC clone RP24-226L19 from 1, complete sequence
          Length = 183563

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 386    tcctctcctccacaattttc 405
              ||||||||||||||||||||
Sbjct: 167824 tcctctcctccacaattttc 167843

>gb|AC090940.2| Homo sapiens chromosome 3 clone RP11-167P17 map 3p, complete sequence
          Length = 170293

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 26    cacagtctgttttgctagtt 45
             ||||||||||||||||||||
Sbjct: 73069 cacagtctgttttgctagtt 73050


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,498,864
Number of Sequences: 3902068
Number of extensions: 4498864
Number of successful extensions: 79788
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 79672
Number of HSP's gapped (non-prelim): 116
length of query: 664
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 641
effective length of database: 17,143,297,704
effective search space: 10988853828264
effective search space used: 10988853828264
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)