ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal4c22
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_792787.1| PREDICTED: Strongylocentrotus purpuratus simila... 44 0.52
2emb|AL606607.3|OSJN00068 Oryza sativa genomic DNA, chromosome 4,... 44 0.52
3dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.52
4dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.52
5dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.52
6dbj|AP007254.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.52
7dbj|AP006584.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.52
8dbj|AP006525.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.52
9gb|AC122405.4| Mus musculus BAC clone RP24-119O6 from chromosome... 42 2.1
10ref|XM_759369.1| Theileria parva strain Muguga chromosome 4 hypo... 42 2.1
11gb|AC150786.21| Medicago truncatula clone mth2-170o9, complete s... 42 2.1
12emb|AL356269.10| Human DNA sequence from clone RP11-420J12 on ch... 42 2.1
13gb|AC079414.6| Homo sapiens chromosome 16 clone RP11-358L22, com... 42 2.1
14gb|AC009044.3|AC009044 Homo sapiens chromosome 16 clone RP11-190... 42 2.1
15dbj|AP005860.2| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
16emb|AL929452.9| Mouse DNA sequence from clone RP23-345L15 on chr... 42 2.1
17gb|U51244.1|U51244 Homo sapiens BAC clone 1D9 from 2p21, complet... 42 2.1
18ref|XM_588438.2| PREDICTED: Bos taurus similar to TRAF2 and NCK ... 40 8.2
19gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 8.2
20gb|AC133333.5| Oryza sativa chromosome 3 BAC OJ1785_A05 genomic ... 40 8.2
21emb|CT010515.8| M.truncatula DNA sequence from clone MTH2-146B21... 40 8.2
22ref|XM_568826.1| Cryptococcus neoformans var. neoformans JEC21 t... 40 8.2
23gb|AC148347.13| Medicago truncatula clone mth2-26g24, complete s... 40 8.2
24gb|AC153125.10| Medicago truncatula clone mth2-74f16, complete s... 40 8.2
25gb|AC148291.22| Medicago truncatula clone mth2-14n3, complete se... 40 8.2
26gb|AC140550.31| Medicago truncatula clone mth2-54a24, complete s... 40 8.2
27gb|AC150205.5| Medicago truncatula clone mth2-72l17, complete se... 40 8.2
28gb|AC127019.29| Medicago truncatula clone mth2-31b1, complete se... 40 8.2
29emb|AL121827.34|HSA261N11 Human DNA sequence from clone RP11-261... 40 8.2
30gb|AE017342.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 8.2
31gb|DQ093071.1| Homo sapiens cholinergic receptor, nicotinic, alp... 40 8.2
32gb|AC151673.24| Medicago truncatula clone mth2-2k12, complete se... 40 8.2
33gb|AC148525.14| Medicago truncatula clone mth2-24i13, complete s... 40 8.2
34gb|AF083031.2|AF083031 Guillardia theta nucleomorph chromosome 3... 40 8.2
35gb|AC135958.2| Oryza sativa chromosome 3 BAC OSJNBa0059E14 genom... 40 8.2
36emb|AL113886.1|CNS01B7Q Botrytis cinerea strain T4 cDNA library 40 8.2
37dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.2
38dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.2
39dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.2
40gb|AC009499.4| Homo sapiens BAC clone RP11-510D10 from 2, comple... 40 8.2
41gb|AC073066.5| Homo sapiens BAC clone RP11-149P12 from 2, comple... 40 8.2
42dbj|AP003273.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.2
43dbj|AP002901.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.2
44dbj|AP005782.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.2
45dbj|AP005802.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.2
46dbj|AP004070.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.2
47emb|CT030245.8| M.truncatula DNA sequence from clone MTH2-59B18 ... 40 8.2
48emb|CR956402.15| M.truncatula DNA sequence from clone MTH2-50J5 ... 40 8.2 
>ref|XM_792787.1| PREDICTED: Strongylocentrotus purpuratus similar to inositol
            1,4,5-triphosphate receptor, type 1 (LOC593307), partial
            mRNA
          Length = 1932

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 507  gctgttgccatggaggatgaag 528
            ||||||||||||||||||||||
Sbjct: 1309 gctgttgccatggaggatgaag 1330



 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 507  gctgttgccatggaggatgaag 528
            ||||||||||||||||||||||
Sbjct: 1195 gctgttgccatggaggatgaag 1216
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>emb|AL606607.3|OSJN00068 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0065L13,
             complete sequence
          Length = 103039

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 141   gtaatactccctttatttcaaaatac 166
             ||||||||||||| ||||||||||||
Sbjct: 58729 gtaatactcccttcatttcaaaatac 58754
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 141      gtaatactccctttatttcaaaatac 166
                ||||||||||||| ||||||||||||
Sbjct: 25481236 gtaatactcccttcatttcaaaatac 25481261
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 144      atactccctttatttcaaaata 165
                ||||||||||||||||||||||
Sbjct: 19962474 atactccctttatttcaaaata 19962453



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 471     gagcagcatatgaacatgata 491
               |||||||||||||||||||||
Sbjct: 1091177 gagcagcatatgaacatgata 1091157



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 143     aatactccctttatttcaaaatac 166
               |||||||||| |||||||||||||
Sbjct: 8588879 aatactccctctatttcaaaatac 8588902
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 207      cgacaagtattttagaacggat 228
                ||||||||||||||||||||||
Sbjct: 10411200 cgacaagtattttagaacggat 10411221
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>dbj|AP007254.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9,
             fosmid clone:OSJNOa211K08
          Length = 41043

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 144   atactccctttatttcaaaata 165
             ||||||||||||||||||||||
Sbjct: 19113 atactccctttatttcaaaata 19092
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>dbj|AP006584.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:B1197G05
          Length = 130823

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 207    cgacaagtattttagaacggat 228
              ||||||||||||||||||||||
Sbjct: 118737 cgacaagtattttagaacggat 118758
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>dbj|AP006525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0498F03
          Length = 54025

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 144   atactccctttatttcaaaata 165
             ||||||||||||||||||||||
Sbjct: 36622 atactccctttatttcaaaata 36601
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>gb|AC122405.4| Mus musculus BAC clone RP24-119O6 from chromosome 12, complete sequence
          Length = 196285

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 176    taccatgacaagtatttttgt 196
              |||||||||||||||||||||
Sbjct: 149294 taccatgacaagtatttttgt 149314
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>ref|XM_759369.1| Theileria parva strain Muguga chromosome 4 hypothetical protein
            (TP04_0825) partial mRNA
          Length = 3177

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 99   tgtaatgataaaccttttgag 119
            |||||||||||||||||||||
Sbjct: 1384 tgtaatgataaaccttttgag 1404
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>gb|AC150786.21| Medicago truncatula clone mth2-170o9, complete sequence
          Length = 142649

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 142    taatactccctttatttcaaaatac 166
              |||||||||||| ||||||||||||
Sbjct: 134738 taatactcccttcatttcaaaatac 134714
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>emb|AL356269.10| Human DNA sequence from clone RP11-420J12 on chromosome 13, complete
             sequence
          Length = 141895

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 413   cctctctccctgttgttttccctcc 437
             |||||||||||||||||||| ||||
Sbjct: 38986 cctctctccctgttgttttctctcc 39010
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>gb|AC079414.6| Homo sapiens chromosome 16 clone RP11-358L22, complete sequence
          Length = 167015

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 81    gtgtaatagtagcttgcttgtaatg 105
             |||||||||||||||||| ||||||
Sbjct: 50535 gtgtaatagtagcttgctggtaatg 50511
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>gb|AC009044.3|AC009044 Homo sapiens chromosome 16 clone RP11-190D6, complete sequence
          Length = 167195

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 81     gtgtaatagtagcttgcttgtaatg 105
              |||||||||||||||||| ||||||
Sbjct: 132425 gtgtaatagtagcttgctggtaatg 132401
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>dbj|AP005860.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OJ1134_E08
          Length = 153002

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 471    gagcagcatatgaacatgata 491
              |||||||||||||||||||||
Sbjct: 128870 gagcagcatatgaacatgata 128850
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>emb|AL929452.9| Mouse DNA sequence from clone RP23-345L15 on chromosome X, complete
             sequence
          Length = 221920

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 31    agagagccctagaagatatat 51
             |||||||||||||||||||||
Sbjct: 53724 agagagccctagaagatatat 53744
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>gb|U51244.1|U51244 Homo sapiens BAC clone 1D9 from 2p21, complete sequence
          Length = 67571

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 461   gcatggcagggagcagcatat 481
             |||||||||||||||||||||
Sbjct: 65248 gcatggcagggagcagcatat 65268
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>ref|XM_588438.2| PREDICTED: Bos taurus similar to TRAF2 and NCK interacting kinase
           (LOC539627), mRNA
          Length = 5942

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 516 atggaggatgaagaggaaga 535
           ||||||||||||||||||||
Sbjct: 247 atggaggatgaagaggaaga 266
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 142      taatactccctttatttcaaaatacttg 169
                ||||||||||||| ||||||| ||||||
Sbjct: 33396684 taatactccctttgtttcaaattacttg 33396657



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 143      aatactccctttatttcaaaatac 166
                |||||||||| |||||||||||||
Sbjct: 21304808 aatactccctctatttcaaaatac 21304831
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>gb|AC133333.5| Oryza sativa chromosome 3 BAC OJ1785_A05 genomic sequence, complete
              sequence
          Length = 174910

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 143    aatactccctttatttcaaaatac 166
              |||||||||| |||||||||||||
Sbjct: 160723 aatactccctctatttcaaaatac 160746
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>emb|CT010515.8| M.truncatula DNA sequence from clone MTH2-146B21 on chromosome 3,
              complete sequence
          Length = 130617

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 323    gttgggaagaggctgctgca 342
              ||||||||||||||||||||
Sbjct: 125675 gttgggaagaggctgctgca 125656
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>ref|XM_568826.1| Cryptococcus neoformans var. neoformans JEC21 tubulin binding protein
            (CNB01560) partial mRNA
          Length = 6369

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 544  ttctccacgatcttctcaac 563
            ||||||||||||||||||||
Sbjct: 3260 ttctccacgatcttctcaac 3241
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>gb|AC148347.13| Medicago truncatula clone mth2-26g24, complete sequence
          Length = 114712

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 323    gttgggaagaggctgctgca 342
              ||||||||||||||||||||
Sbjct: 107091 gttgggaagaggctgctgca 107110



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 323    gttgggaagaggctgctgca 342
              ||||||||||||||||||||
Sbjct: 101976 gttgggaagaggctgctgca 101995



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 323    gttgggaagaggctgctgca 342
              ||||||||||||||||||||
Sbjct: 101881 gttgggaagaggctgctgca 101900
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>gb|AC153125.10| Medicago truncatula clone mth2-74f16, complete sequence
          Length = 128458

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 323   gttgggaagaggctgctgca 342
             ||||||||||||||||||||
Sbjct: 82261 gttgggaagaggctgctgca 82242
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>gb|AC148291.22| Medicago truncatula clone mth2-14n3, complete sequence
          Length = 138853

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 323  gttgggaagaggctgctgca 342
            ||||||||||||||||||||
Sbjct: 1963 gttgggaagaggctgctgca 1982
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>gb|AC140550.31| Medicago truncatula clone mth2-54a24, complete sequence
          Length = 129388

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 233    agtactaatactaattggagtgct 256
              |||||||||||||||| |||||||
Sbjct: 129022 agtactaatactaattagagtgct 129045
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>gb|AC150205.5| Medicago truncatula clone mth2-72l17, complete sequence
          Length = 130555

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 323   gttgggaagaggctgctgca 342
             ||||||||||||||||||||
Sbjct: 18616 gttgggaagaggctgctgca 18597
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>gb|AC127019.29| Medicago truncatula clone mth2-31b1, complete sequence
          Length = 122810

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 323   gttgggaagaggctgctgca 342
             ||||||||||||||||||||
Sbjct: 30538 gttgggaagaggctgctgca 30519



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 323   gttgggaagaggctgctgca 342
             ||||||||||||||||||||
Sbjct: 25423 gttgggaagaggctgctgca 25404
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>emb|AL121827.34|HSA261N11 Human DNA sequence from clone RP11-261N11 on chromosome 20, complete
              sequence
          Length = 184223

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 324    ttgggaagaggctgctgcag 343
              ||||||||||||||||||||
Sbjct: 118997 ttgggaagaggctgctgcag 119016
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>gb|AE017342.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 2, complete
              sequence
          Length = 1632307

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 544    ttctccacgatcttctcaac 563
              ||||||||||||||||||||
Sbjct: 464085 ttctccacgatcttctcaac 464066
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>gb|DQ093071.1| Homo sapiens cholinergic receptor, nicotinic, alpha polypeptide 4
             (CHRNA4) gene, complete cds
          Length = 20632

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 324   ttgggaagaggctgctgcag 343
             ||||||||||||||||||||
Sbjct: 13865 ttgggaagaggctgctgcag 13846
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>gb|AC151673.24| Medicago truncatula clone mth2-2k12, complete sequence
          Length = 125859

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 323   gttgggaagaggctgctgca 342
             ||||||||||||||||||||
Sbjct: 50520 gttgggaagaggctgctgca 50501
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>gb|AC148525.14| Medicago truncatula clone mth2-24i13, complete sequence
          Length = 94953

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 323   gttgggaagaggctgctgca 342
             ||||||||||||||||||||
Sbjct: 64844 gttgggaagaggctgctgca 64825



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 323   gttgggaagaggctgctgca 342
             ||||||||||||||||||||
Sbjct: 64749 gttgggaagaggctgctgca 64730



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 323   gttgggaagaggctgctgca 342
             ||||||||||||||||||||
Sbjct: 59634 gttgggaagaggctgctgca 59615
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>gb|AF083031.2|AF083031 Guillardia theta nucleomorph chromosome 3, complete sequence
          Length = 174133

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 94    ttgcttgtaatgataaacct 113
             ||||||||||||||||||||
Sbjct: 28252 ttgcttgtaatgataaacct 28271
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>gb|AC135958.2| Oryza sativa chromosome 3 BAC OSJNBa0059E14 genomic sequence, complete
              sequence
          Length = 154555

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 142    taatactccctttatttcaaaatacttg 169
              ||||||||||||| ||||||| ||||||
Sbjct: 101427 taatactccctttgtttcaaattacttg 101454
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>emb|AL113886.1|CNS01B7Q Botrytis cinerea strain T4 cDNA library
          Length = 720

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 541 ccattctccacgatcttctc 560
           ||||||||||||||||||||
Sbjct: 620 ccattctccacgatcttctc 639
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 142      taatactccctttatttcaaaatacttg 169
                ||||||||||||| ||||||| ||||||
Sbjct: 33487194 taatactccctttgtttcaaattacttg 33487167



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 143      aatactccctttatttcaaaatac 166
                |||||||||| |||||||||||||
Sbjct: 21297837 aatactccctctatttcaaaatac 21297860
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 206     acgacaagtattttagaacggata 229
               |||||||||||||||| |||||||
Sbjct: 7500052 acgacaagtattttaggacggata 7500029
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 142      taatactccctttatttcaaaata 165
                ||||||||||| ||||||||||||
Sbjct: 29441113 taatactccctctatttcaaaata 29441090
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>gb|AC009499.4| Homo sapiens BAC clone RP11-510D10 from 2, complete sequence
          Length = 176570

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 105   gataaaccttttgagactcc 124
             ||||||||||||||||||||
Sbjct: 63381 gataaaccttttgagactcc 63400
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>gb|AC073066.5| Homo sapiens BAC clone RP11-149P12 from 2, complete sequence
          Length = 169286

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 291    gtatttcatacataaaccaa 310
              ||||||||||||||||||||
Sbjct: 140817 gtatttcatacataaaccaa 140836
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>dbj|AP003273.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0510F09
          Length = 138277

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 142    taatactccctttatttcaaaata 165
              ||||||||||| ||||||||||||
Sbjct: 136175 taatactccctctatttcaaaata 136152
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>dbj|AP002901.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0456F08
          Length = 156850

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 142  taatactccctttatttcaaaata 165
            ||||||||||| ||||||||||||
Sbjct: 7387 taatactccctctatttcaaaata 7364
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>dbj|AP005782.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBb0079G12
          Length = 139796

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 143    aatactccctttatttcaaaatac 166
              |||||||||| |||||||||||||
Sbjct: 110089 aatactccctctatttcaaaatac 110112
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>dbj|AP005802.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0057D11
          Length = 190790

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 143   aatactccctttatttcaaaatac 166
             |||||||||| |||||||||||||
Sbjct: 18675 aatactccctctatttcaaaatac 18698
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>dbj|AP004070.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1705_E12
          Length = 191416

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 206   acgacaagtattttagaacggata 229
             |||||||||||||||| |||||||
Sbjct: 93758 acgacaagtattttaggacggata 93735
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>emb|CT030245.8| M.truncatula DNA sequence from clone MTH2-59B18 on chromosome 3, complete
              sequence
          Length = 128436

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 323    gttgggaagaggctgctgca 342
              ||||||||||||||||||||
Sbjct: 119600 gttgggaagaggctgctgca 119581



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 323    gttgggaagaggctgctgca 342
              ||||||||||||||||||||
Sbjct: 114485 gttgggaagaggctgctgca 114466



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 323   gttgggaagaggctgctgca 342
             ||||||||||||||||||||
Sbjct: 32842 gttgggaagaggctgctgca 32823



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 323   gttgggaagaggctgctgca 342
             ||||||||||||||||||||
Sbjct: 27729 gttgggaagaggctgctgca 27710
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>emb|CR956402.15| M.truncatula DNA sequence from clone MTH2-50J5 on chromosome 3, complete
              sequence
          Length = 142361

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 323    gttgggaagaggctgctgca 342
              ||||||||||||||||||||
Sbjct: 103741 gttgggaagaggctgctgca 103722



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 323   gttgggaagaggctgctgca 342
             ||||||||||||||||||||
Sbjct: 98607 gttgggaagaggctgctgca 98588


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,576,074
Number of Sequences: 3902068
Number of extensions: 5576074
Number of successful extensions: 124390
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 123801
Number of HSP's gapped (non-prelim): 589
length of query: 599
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 576
effective length of database: 17,143,297,704
effective search space: 9874539477504
effective search space used: 9874539477504
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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