ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal3n20
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK070194.1| Oryza sativa (japonica cultivar-group) cDNA clon... 202 1e-48
2dbj|AK069848.1| Oryza sativa (japonica cultivar-group) cDNA clon... 202 1e-48
3dbj|AK119626.1| Oryza sativa (japonica cultivar-group) cDNA clon... 145 2e-31
4dbj|AK106744.1| Oryza sativa (japonica cultivar-group) cDNA clon... 145 2e-31
5ref|NM_191091.1| Oryza sativa (japonica cultivar-group), predic... 121 3e-24
6dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 121 3e-24
7dbj|AP003255.3| Oryza sativa (japonica cultivar-group) genomic D... 121 3e-24
8dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 103 7e-19
9gb|AC137619.3| Oryza sativa (japonica cultivar-group) chromosome... 103 7e-19
10gb|BC108459.1| Xenopus laevis cDNA clone MGC:130731 IMAGE:798333... 42 2.1
11ref|NM_120277.3| Arabidopsis thaliana auxin:hydrogen symporter A... 42 2.1
12gb|AE009156.1| Agrobacterium tumefaciens str. C58 circular chrom... 42 2.1
13emb|AL162508.1|ATT7H20 Arabidopsis thaliana DNA chromosome 5, BA... 42 2.1
14gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome 42 2.1
15emb|BX829737.1|CNS0A1BL Arabidopsis thaliana Full-length cDNA Co... 42 2.1
16emb|BX829574.1|CNS0A1GI Arabidopsis thaliana Full-length cDNA Co... 42 2.1
17emb|BX832768.1|CNS0A11R Arabidopsis thaliana Full-length cDNA Co... 42 2.1
18gb|BT002925.1| Arabidopsis thaliana clone RAFL15-04-F05 (R20115)... 42 2.1
19dbj|AB025608.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 42 2.1
20gb|AC098738.2| Mus musculus BAC clone RP23-122F7 from 8, complet... 40 8.3
21gb|AC091624.3| Canis familiaris clone RP81-117B1, complete sequence 40 8.3
22emb|AL596179.3| Human DNA sequence from clone RP11-49A12 on chro... 40 8.3
23gb|AC160970.7| Mus musculus BAC clone RP24-492D11 from chromosom... 40 8.3
24gb|AC106777.2| Homo sapiens chromosome 5 clone RP11-326M11, comp... 40 8.3
25gb|AC117207.5| Mus musculus BAC clone RP23-278A7 from 8, complet... 40 8.3
26emb|AL929247.5| Zebrafish DNA sequence from clone CH211-152J7 in... 40 8.3
27dbj|AP006428.1| Lotus japonicus genomic DNA, chromosome 5, clone... 40 8.3 
>dbj|AK070194.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023041H12, full
            insert sequence
          Length = 1930

 Score =  202 bits (102), Expect = 1e-48
 Identities = 229/270 (84%), Gaps = 1/270 (0%)
 Strand = Plus / Minus

                                                                        
Query: 342  ttagaagagcaacgtcaagtagaaaataatccaccccgccatggagaacactgcaaaaat 401
            ||||||||| ||  |||| || ||||||||||| || |||||||||||||| ||||| ||
Sbjct: 1496 ttagaagagtaagctcaaatacaaaataatccatcctgccatggagaacacagcaaagat 1437

                                                                        
Query: 402  gtgcacccagaacaagatcgcggctgattctttcccgcaccctcttaggttggcaacggc 461
            |||||||||||||||||| || || |||||||| || || || || ||||| ||||| ||
Sbjct: 1436 gtgcacccagaacaagatagcagcagattcttttccacagcccctcaggtttgcaacagc 1377

                                                                        
Query: 462  acctgagagcacttgaggtgggcatcgagtgctgcagtagtaggacaaacttgaacattt 521
            |||||| |||||  || |||||||| || ||||||||||| | |||||||||||||||||
Sbjct: 1376 acctgacagcaca-gatgtgggcatagaatgctgcagtagcaagacaaacttgaacattt 1318

                                                                        
Query: 522  tgtcatctttgggaatgaaaccgagtttgtcaactagcatgacgatgccaaccccggcaa 581
            |||||||||| ||||||||||| ||||| ||||| | ||  | |||||||||||| ||||
Sbjct: 1317 tgtcatctttaggaatgaaaccaagtttatcaaccaacacaatgatgccaaccccagcaa 1258

                                          
Query: 582  ttggaaccaagatcagacgtgcaaagataa 611
              ||||||||||| || |||||||| ||||
Sbjct: 1257 gaggaaccaagatgagccgtgcaaaaataa 1228
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>dbj|AK069848.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023034N13, full
            insert sequence
          Length = 1975

 Score =  202 bits (102), Expect = 1e-48
 Identities = 229/270 (84%), Gaps = 1/270 (0%)
 Strand = Plus / Minus

                                                                        
Query: 342  ttagaagagcaacgtcaagtagaaaataatccaccccgccatggagaacactgcaaaaat 401
            ||||||||| ||  |||| || ||||||||||| || |||||||||||||| ||||| ||
Sbjct: 1472 ttagaagagtaagctcaaatacaaaataatccatcctgccatggagaacacagcaaagat 1413

                                                                        
Query: 402  gtgcacccagaacaagatcgcggctgattctttcccgcaccctcttaggttggcaacggc 461
            |||||||||||||||||| || || |||||||| || || || || ||||| ||||| ||
Sbjct: 1412 gtgcacccagaacaagatagcagcagattcttttccacagcccctcaggtttgcaacagc 1353

                                                                        
Query: 462  acctgagagcacttgaggtgggcatcgagtgctgcagtagtaggacaaacttgaacattt 521
            |||||| |||||  || |||||||| || ||||||||||| | |||||||||||||||||
Sbjct: 1352 acctgacagcaca-gatgtgggcatagaatgctgcagtagcaagacaaacttgaacattt 1294

                                                                        
Query: 522  tgtcatctttgggaatgaaaccgagtttgtcaactagcatgacgatgccaaccccggcaa 581
            |||||||||| ||||||||||| ||||| ||||| | ||  | |||||||||||| ||||
Sbjct: 1293 tgtcatctttaggaatgaaaccaagtttatcaaccaacacaatgatgccaaccccagcaa 1234

                                          
Query: 582  ttggaaccaagatcagacgtgcaaagataa 611
              ||||||||||| || |||||||| ||||
Sbjct: 1233 gaggaaccaagatgagccgtgcaaaaataa 1204
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>dbj|AK119626.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-H11, full
            insert sequence
          Length = 1737

 Score =  145 bits (73), Expect = 2e-31
 Identities = 203/245 (82%), Gaps = 1/245 (0%)
 Strand = Plus / Minus

                                                                        
Query: 367  ataatccaccccgccatggagaacactgcaaaaatgtgcacccagaacaagatcgcggct 426
            |||||||| || ||||||||||| || |||||||||||||||||||||||||| || |||
Sbjct: 1451 ataatccatcctgccatggagaagacagcaaaaatgtgcacccagaacaagattgcagct 1392

                                                                        
Query: 427  gattctttcccgcaccctcttaggttggcaacggcacctgagagcacttgaggtgggcat 486
            ||||| || || || ||||||||||| ||||| |||||||| || ||  || ||||||||
Sbjct: 1391 gattccttgccacaacctcttaggtttgcaacagcacctgatagtac-cgatgtgggcat 1333

                                                                        
Query: 487  cgagtgctgcagtagtaggacaaacttgaacattttgtcatctttgggaatgaaaccgag 546
             |||||||||||||  ||||| ||||||||||| |||||  |||| ||||| || || ||
Sbjct: 1332 agagtgctgcagtaacaggacgaacttgaacatcttgtctccttttggaataaatccaag 1273

                                                                        
Query: 547  tttgtcaactagcatgacgatgccaaccccggcaattggaaccaagatcagacgtgcaaa 606
             |||||| | |    |||||||||||  || |||||||||||||| ||||  ||||||||
Sbjct: 1272 cttgtcagcaaatgagacgatgccaataccagcaattggaaccaatatcaagcgtgcaaa 1213

                 
Query: 607  gataa 611
             ||||
Sbjct: 1212 tataa 1208
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>dbj|AK106744.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-115-B08, full
            insert sequence
          Length = 1705

 Score =  145 bits (73), Expect = 2e-31
 Identities = 203/245 (82%), Gaps = 1/245 (0%)
 Strand = Plus / Minus

                                                                        
Query: 367  ataatccaccccgccatggagaacactgcaaaaatgtgcacccagaacaagatcgcggct 426
            |||||||| || ||||||||||| || |||||||||||||||||||||||||| || |||
Sbjct: 1416 ataatccatcctgccatggagaagacagcaaaaatgtgcacccagaacaagattgcagct 1357

                                                                        
Query: 427  gattctttcccgcaccctcttaggttggcaacggcacctgagagcacttgaggtgggcat 486
            ||||| || || || ||||||||||| ||||| |||||||| || ||  || ||||||||
Sbjct: 1356 gattccttgccacaacctcttaggtttgcaacagcacctgatagtac-cgatgtgggcat 1298

                                                                        
Query: 487  cgagtgctgcagtagtaggacaaacttgaacattttgtcatctttgggaatgaaaccgag 546
             |||||||||||||  ||||| ||||||||||| |||||  |||| ||||| || || ||
Sbjct: 1297 agagtgctgcagtaacaggacgaacttgaacatcttgtctccttttggaataaatccaag 1238

                                                                        
Query: 547  tttgtcaactagcatgacgatgccaaccccggcaattggaaccaagatcagacgtgcaaa 606
             |||||| | |    |||||||||||  || |||||||||||||| ||||  ||||||||
Sbjct: 1237 cttgtcagcaaatgagacgatgccaataccagcaattggaaccaatatcaagcgtgcaaa 1178

                 
Query: 607  gataa 611
             ||||
Sbjct: 1177 tataa 1173
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>ref|NM_191091.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2475

 Score =  121 bits (61), Expect = 3e-24
 Identities = 115/133 (86%)
 Strand = Plus / Minus

                                                                        
Query: 479  gtgggcatcgagtgctgcagtagtaggacaaacttgaacattttgtcatctttgggaatg 538
            |||||||| || ||||||||||| | ||||||||||||||||||||||||||| ||||||
Sbjct: 1160 gtgggcatagaatgctgcagtagcaagacaaacttgaacattttgtcatctttaggaatg 1101

                                                                        
Query: 539  aaaccgagtttgtcaactagcatgacgatgccaaccccggcaattggaaccaagatcaga 598
            ||||| ||||| ||||| | ||  | |||||||||||| ||||  ||||||||||| || 
Sbjct: 1100 aaaccaagtttatcaaccaacacaatgatgccaaccccagcaagaggaaccaagatgagc 1041

                         
Query: 599  cgtgcaaagataa 611
            |||||||| ||||
Sbjct: 1040 cgtgcaaaaataa 1028
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  121 bits (61), Expect = 3e-24
 Identities = 115/133 (86%)
 Strand = Plus / Minus

                                                                            
Query: 479      gtgggcatcgagtgctgcagtagtaggacaaacttgaacattttgtcatctttgggaatg 538
                |||||||| || ||||||||||| | ||||||||||||||||||||||||||| ||||||
Sbjct: 34831129 gtgggcatagaatgctgcagtagcaagacaaacttgaacattttgtcatctttaggaatg 34831070

                                                                            
Query: 539      aaaccgagtttgtcaactagcatgacgatgccaaccccggcaattggaaccaagatcaga 598
                ||||| ||||| ||||| | ||  | |||||||||||| ||||  ||||||||||| || 
Sbjct: 34831069 aaaccaagtttatcaaccaacacaatgatgccaaccccagcaagaggaaccaagatgagc 34831010

                             
Query: 599      cgtgcaaagataa 611
                |||||||| ||||
Sbjct: 34831009 cgtgcaaaaataa 34830997



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 106/125 (84%)
 Strand = Plus / Minus

                                                                            
Query: 342      ttagaagagcaacgtcaagtagaaaataatccaccccgccatggagaacactgcaaaaat 401
                ||||||||| ||  |||| || ||||||||||| || |||||||||||||| ||||| ||
Sbjct: 34831454 ttagaagagtaagctcaaatacaaaataatccatcctgccatggagaacacagcaaagat 34831395

                                                                            
Query: 402      gtgcacccagaacaagatcgcggctgattctttcccgcaccctcttaggttggcaacggc 461
                |||||||||||||||||| || || |||||||| || || || || ||||| ||||| ||
Sbjct: 34831394 gtgcacccagaacaagatagcagcagattcttttccacagcccctcaggtttgcaacagc 34831335

                     
Query: 462      acctg 466
                |||||
Sbjct: 34831334 acctg 34831330
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>dbj|AP003255.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0454H12
          Length = 161004

 Score =  121 bits (61), Expect = 3e-24
 Identities = 115/133 (86%)
 Strand = Plus / Minus

                                                                         
Query: 479   gtgggcatcgagtgctgcagtagtaggacaaacttgaacattttgtcatctttgggaatg 538
             |||||||| || ||||||||||| | ||||||||||||||||||||||||||| ||||||
Sbjct: 90301 gtgggcatagaatgctgcagtagcaagacaaacttgaacattttgtcatctttaggaatg 90242

                                                                         
Query: 539   aaaccgagtttgtcaactagcatgacgatgccaaccccggcaattggaaccaagatcaga 598
             ||||| ||||| ||||| | ||  | |||||||||||| ||||  ||||||||||| || 
Sbjct: 90241 aaaccaagtttatcaaccaacacaatgatgccaaccccagcaagaggaaccaagatgagc 90182

                          
Query: 599   cgtgcaaagataa 611
             |||||||| ||||
Sbjct: 90181 cgtgcaaaaataa 90169



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 106/125 (84%)
 Strand = Plus / Minus

                                                                         
Query: 342   ttagaagagcaacgtcaagtagaaaataatccaccccgccatggagaacactgcaaaaat 401
             ||||||||| ||  |||| || ||||||||||| || |||||||||||||| ||||| ||
Sbjct: 90626 ttagaagagtaagctcaaatacaaaataatccatcctgccatggagaacacagcaaagat 90567

                                                                         
Query: 402   gtgcacccagaacaagatcgcggctgattctttcccgcaccctcttaggttggcaacggc 461
             |||||||||||||||||| || || |||||||| || || || || ||||| ||||| ||
Sbjct: 90566 gtgcacccagaacaagatagcagcagattcttttccacagcccctcaggtttgcaacagc 90507

                  
Query: 462   acctg 466
             |||||
Sbjct: 90506 acctg 90502
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  103 bits (52), Expect = 7e-19
 Identities = 88/100 (88%)
 Strand = Plus / Plus

                                                                            
Query: 367      ataatccaccccgccatggagaacactgcaaaaatgtgcacccagaacaagatcgcggct 426
                |||||||| || ||||||||||| || |||||||||||||||||||||||||| || |||
Sbjct: 23552940 ataatccatcctgccatggagaagacagcaaaaatgtgcacccagaacaagattgcagct 23552999

                                                        
Query: 427      gattctttcccgcaccctcttaggttggcaacggcacctg 466
                ||||| || || || ||||||||||| ||||| |||||||
Sbjct: 23553000 gattccttgccacaacctcttaggtttgcaacagcacctg 23553039



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 108/133 (81%)
 Strand = Plus / Plus

                                                                            
Query: 479      gtgggcatcgagtgctgcagtagtaggacaaacttgaacattttgtcatctttgggaatg 538
                |||||||| |||||||||||||  ||||| ||||||||||| |||||  |||| ||||| 
Sbjct: 23553154 gtgggcatagagtgctgcagtaacaggacgaacttgaacatcttgtctccttttggaata 23553213

                                                                            
Query: 539      aaaccgagtttgtcaactagcatgacgatgccaaccccggcaattggaaccaagatcaga 598
                || || || |||||| | |    |||||||||||  || |||||||||||||| ||||  
Sbjct: 23553214 aatccaagcttgtcagcaaatgagacgatgccaataccagcaattggaaccaatatcaag 23553273

                             
Query: 599      cgtgcaaagataa 611
                |||||||| ||||
Sbjct: 23553274 cgtgcaaatataa 23553286
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>gb|AC137619.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0095J22, complete sequence
          Length = 151730

 Score =  103 bits (52), Expect = 7e-19
 Identities = 88/100 (88%)
 Strand = Plus / Plus

                                                                         
Query: 367   ataatccaccccgccatggagaacactgcaaaaatgtgcacccagaacaagatcgcggct 426
             |||||||| || ||||||||||| || |||||||||||||||||||||||||| || |||
Sbjct: 90112 ataatccatcctgccatggagaagacagcaaaaatgtgcacccagaacaagattgcagct 90171

                                                     
Query: 427   gattctttcccgcaccctcttaggttggcaacggcacctg 466
             ||||| || || || ||||||||||| ||||| |||||||
Sbjct: 90172 gattccttgccacaacctcttaggtttgcaacagcacctg 90211



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 108/133 (81%)
 Strand = Plus / Plus

                                                                         
Query: 479   gtgggcatcgagtgctgcagtagtaggacaaacttgaacattttgtcatctttgggaatg 538
             |||||||| |||||||||||||  ||||| ||||||||||| |||||  |||| ||||| 
Sbjct: 90326 gtgggcatagagtgctgcagtaacaggacgaacttgaacatcttgtctccttttggaata 90385

                                                                         
Query: 539   aaaccgagtttgtcaactagcatgacgatgccaaccccggcaattggaaccaagatcaga 598
             || || || |||||| | |    |||||||||||  || |||||||||||||| ||||  
Sbjct: 90386 aatccaagcttgtcagcaaatgagacgatgccaataccagcaattggaaccaatatcaag 90445

                          
Query: 599   cgtgcaaagataa 611
             |||||||| ||||
Sbjct: 90446 cgtgcaaatataa 90458
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>gb|BC108459.1| Xenopus laevis cDNA clone MGC:130731 IMAGE:7983334, complete cds
          Length = 1620

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 515  aacattttgtcatctttggga 535
            |||||||||||||||||||||
Sbjct: 1526 aacattttgtcatctttggga 1546
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>ref|NM_120277.3| Arabidopsis thaliana auxin:hydrogen symporter AT5G01990 mRNA,
            complete cds
          Length = 1749

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 442  cctcttaggttggcaacggcacctgagagcact 474
            ||||| ||||||||||| || ||||||||||||
Sbjct: 1507 cctctaaggttggcaacagctcctgagagcact 1475
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>gb|AE009156.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 182
            of 256 of the complete sequence
          Length = 11936

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 404  gcacccagaacaagatcgcggctga 428
            ||||||||||| |||||||||||||
Sbjct: 8823 gcacccagaaccagatcgcggctga 8799
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>emb|AL162508.1|ATT7H20 Arabidopsis thaliana DNA chromosome 5, BAC clone T7H20 (ESSA project)
          Length = 87581

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                             
Query: 442  cctcttaggttggcaacggcacctgagagcact 474
            ||||| ||||||||||| || ||||||||||||
Sbjct: 8486 cctctaaggttggcaacagctcctgagagcact 8518
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>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome
          Length = 2841581

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 404     gcacccagaacaagatcgcggctga 428
               ||||||||||| |||||||||||||
Sbjct: 2015774 gcacccagaaccagatcgcggctga 2015750
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>emb|BX829737.1|CNS0A1BL Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB32ZB10 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1483

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 442  cctcttaggttggcaacggcacctgagagcact 474
            ||||| ||||||||||| || ||||||||||||
Sbjct: 1255 cctctaaggttggcaacagctcctgagagcact 1223
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>emb|BX829574.1|CNS0A1GI Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB22ZB07 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1509

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 442  cctcttaggttggcaacggcacctgagagcact 474
            ||||| ||||||||||| || ||||||||||||
Sbjct: 1277 cctctaaggttggcaacagctcctgagagcact 1245
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>emb|BX832768.1|CNS0A11R Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH9ZF09 of Hormone Treated Callus of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1471

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 442  cctcttaggttggcaacggcacctgagagcact 474
            ||||| ||||||||||| || ||||||||||||
Sbjct: 1229 cctctaaggttggcaacagctcctgagagcact 1197
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>gb|BT002925.1| Arabidopsis thaliana clone RAFL15-04-F05 (R20115) At5g01990 mRNA,
            complete sequence
          Length = 1468

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 442  cctcttaggttggcaacggcacctgagagcact 474
            ||||| ||||||||||| || ||||||||||||
Sbjct: 1242 cctctaaggttggcaacagctcctgagagcact 1210
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>dbj|AB025608.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K14B15
          Length = 83689

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 291 tgttttctcatggtatctact 311
           |||||||||||||||||||||
Sbjct: 249 tgttttctcatggtatctact 269
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>gb|AC098738.2| Mus musculus BAC clone RP23-122F7 from 8, complete sequence
          Length = 216974

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 83     taataatatgggcaggcaca 102
              ||||||||||||||||||||
Sbjct: 215764 taataatatgggcaggcaca 215745
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>gb|AC091624.3| Canis familiaris clone RP81-117B1, complete sequence
          Length = 174712

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 504  ggacaaacttgaacattttg 523
            ||||||||||||||||||||
Sbjct: 8185 ggacaaacttgaacattttg 8166
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>emb|AL596179.3| Human DNA sequence from clone RP11-49A12 on chromosome 6, complete
              sequence
          Length = 169159

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 280    atcttcttccatgttttctc 299
              ||||||||||||||||||||
Sbjct: 109878 atcttcttccatgttttctc 109859
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>gb|AC160970.7| Mus musculus BAC clone RP24-492D11 from chromosome 10, complete
             sequence
          Length = 205283

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 174   acaaagatgggtacgaggaa 193
             ||||||||||||||||||||
Sbjct: 89458 acaaagatgggtacgaggaa 89477
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>gb|AC106777.2| Homo sapiens chromosome 5 clone RP11-326M11, complete sequence
          Length = 161720

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 83    taataatatgggcaggcaca 102
             ||||||||||||||||||||
Sbjct: 51602 taataatatgggcaggcaca 51621
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>gb|AC117207.5| Mus musculus BAC clone RP23-278A7 from 8, complete sequence
          Length = 198927

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 83   taataatatgggcaggcaca 102
            ||||||||||||||||||||
Sbjct: 8254 taataatatgggcaggcaca 8235
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>emb|AL929247.5| Zebrafish DNA sequence from clone CH211-152J7 in linkage group 3,
             complete sequence
          Length = 145564

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 508   aaacttgaacattttgtcatcttt 531
             ||||||||||||| ||||||||||
Sbjct: 21836 aaacttgaacattctgtcatcttt 21859
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>dbj|AP006428.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT04J15, TM0321,
             complete sequence
          Length = 127049

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 349   agcaacgtcaagtagaaaat 368
             ||||||||||||||||||||
Sbjct: 80088 agcaacgtcaagtagaaaat 80107


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,107,052
Number of Sequences: 3902068
Number of extensions: 5107052
Number of successful extensions: 95899
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 95755
Number of HSP's gapped (non-prelim): 140
length of query: 611
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 588
effective length of database: 17,143,297,704
effective search space: 10080259049952
effective search space used: 10080259049952
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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