| Clone Name | rbaal3n18 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | YS76_CAEEL (Q09619) Hypothetical protein ZK892.6 | 31 | 3.0 | 2 | MCSP_RAT (Q64298) Sperm mitochondrial-associated cysteine-rich p... | 30 | 6.7 |
|---|
>YS76_CAEEL (Q09619) Hypothetical protein ZK892.6| Length = 237 Score = 30.8 bits (68), Expect = 3.0 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = -2 Query: 373 NLNGEHFSFHFSQLTHPIYELRPKTC 296 NLN H H +THPI++ R TC Sbjct: 212 NLNINHQESHLQDVTHPIFKKRSSTC 237
>MCSP_RAT (Q64298) Sperm mitochondrial-associated cysteine-rich protein| Length = 145 Score = 29.6 bits (65), Expect = 6.7 Identities = 13/33 (39%), Positives = 15/33 (45%) Frame = +2 Query: 470 LRESPICSKGKLCTLPSVNCTSAVCDCRMSLNC 568 L++SP C K C S CT VC C C Sbjct: 29 LQKSPCCPKSPCCPPKSPCCTPKVCPCPTPCPC 61 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 87,573,820 Number of Sequences: 219361 Number of extensions: 1839263 Number of successful extensions: 4180 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 4021 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4179 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5101629520 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)