>ACINU_MOUSE (Q9JIX8) Apoptotic chromatin condensation inducer in the nucleus|
            (Acinus)
          Length = 1338

 Score = 46.6 bits (109), Expect = 4e-05
 Identities = 23/53 (43%), Positives = 36/53 (67%), Gaps = 2/53 (3%)
 Frame = -1

Query: 271  AREKLPPTPKKA--EPPVVTLDDLFRKTQSSPRIYYLPLSDEEVSARLAAQGK 119
            ++EK     +KA  EPP   LDDLFRKT+++P IY+LPL++ ++  + A Q +
Sbjct: 1190 SKEKKSEKKEKAQEEPPAKLLDDLFRKTKAAPCIYWLPLTESQIVQKEAEQAE 1242

>ACINU_HUMAN (Q9UKV3) Apoptotic chromatin condensation inducer in the nucleus|
            (Acinus)
          Length = 1341

 Score = 46.6 bits (109), Expect = 4e-05
 Identities = 23/53 (43%), Positives = 36/53 (67%), Gaps = 2/53 (3%)
 Frame = -1

Query: 271  AREKLPPTPKKA--EPPVVTLDDLFRKTQSSPRIYYLPLSDEEVSARLAAQGK 119
            ++EK     +KA  EPP   LDDLFRKT+++P IY+LPL+D ++  + A + +
Sbjct: 1191 SKEKKSEKKEKAQEEPPAKLLDDLFRKTKAAPCIYWLPLTDSQIVQKEAERAE 1243

>YI32_AGRT7 (P05679) Insertion element IS136 hypothetical 21.2 kDa protein|
          Length = 194

 Score = 32.3 bits (72), Expect = 0.72
 Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
 Frame = -1

Query: 283 PAGSAREKLPPTPKKAEPPVVTLDDLFRKTQSSPRIYYLPLSDEEVSARLAAQGKAN*CP 104
           P  S      PTP + +PPV +L +  +  + +PR+ +LP S      R  A  KAN  P
Sbjct: 70  PPSSCDRACAPTPGR-DPPVSSLPNSRQPARQNPRLQHLPRS------RACATDKANWAP 122

Query: 103 H--ASGTCIFCKDWFYLL*DC 47
              ASG       +  LL DC
Sbjct: 123 RMTASGRRYRLAGFKTLLNDC 143

>KRA93_HUMAN (Q9BYQ3) Keratin-associated protein 9-3 (Keratin-associated protein|
           9.3) (Ultrahigh sulfur keratin-associated protein 9.3)
          Length = 159

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 5/56 (8%)
 Frame = -3

Query: 368 SKCALPSCCYTK-----GATTASSTPCEASYI*SSRICKGEAPTHPKEGRTSCCDT 216
           S C  P+CC T        TT SSTPC       S  C  +   HP   + +CC T
Sbjct: 6   SPCCQPTCCRTTCWQPTTVTTCSSTPCCQPSCCVSSCC--QPCCHPTCCQNTCCRT 59

>KRA59_HUMAN (P26371) Keratin-associated protein 5-9 (Keratin-associated protein|
           5.9) (Ultrahigh sulfur keratin-associated protein 5.9)
           (Keratin, cuticle, ultrahigh sulfur 1) (Keratin, ultra
           high-sulfur matrix protein A) (UHS keratin A) (UHS KerA)
          Length = 169

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 18/64 (28%), Positives = 25/64 (39%), Gaps = 1/64 (1%)
 Frame = -3

Query: 404 TKGGSFSARSGESKCALPSCCYTKGATTASSTPCEASYI*SSRICKGEAPTHPKEGR-TS 228
           +KGG  S    +  C  P CC +   ++     C   Y      CK   P     GR +S
Sbjct: 68  SKGGCGSCGCSQCSCCKPCCCSSGCGSSCCQCSCCKPYCSQCSCCK---PCCSSSGRGSS 124

Query: 227 CCDT 216
           CC +
Sbjct: 125 CCQS 128

>KRA42_HUMAN (Q9BYR5) Keratin-associated protein 4-2 (Keratin-associated protein|
           4.2) (Ultrahigh sulfur keratin-associated protein 4.2)
          Length = 136

 Score = 29.3 bits (64), Expect = 6.1
 Identities = 19/57 (33%), Positives = 23/57 (40%), Gaps = 8/57 (14%)
 Frame = -3

Query: 362 CALPSCCYTKGATTASSTPCEASYI*SS--------RICKGEAPTHPKEGRTSCCDT 216
           C  PSCC T   T   +T C  S   SS         +C       P  G+T+CC T
Sbjct: 60  CCSPSCCQT---TCCRTTCCRPSCCVSSCFRPQCCQSVCCQPTCCRPSCGQTTCCRT 113

>SHAN2_HUMAN (Q9UPX8) SH3 and multiple ankyrin repeat domains protein 2 (Shank2)|
          Length = 1253

 Score = 28.9 bits (63), Expect = 7.9
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -1

Query: 286 DPAGSAREKLPPTPKKAEPPVVTL 215
           DP  +AR+K PP PK+A    +TL
Sbjct: 135 DPDDTARKKAPPPPKRAPTTALTL 158

>SHAN2_RAT (Q9QX74) SH3 and multiple ankyrin repeat domains protein 2 (Shank2)|
           (Proline-rich synapse-associated protein 1) (ProSAP1)
           (Cortactin-binding protein 1) (CortBP1)
           (GKAP/SAPAP-interacting protein) (SPANK-3)
          Length = 1474

 Score = 28.9 bits (63), Expect = 7.9
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -1

Query: 286 DPAGSAREKLPPTPKKAEPPVVTL 215
           DP  +AR+K PP PK+A    +TL
Sbjct: 346 DPDDTARKKAPPPPKRAPTTALTL 369

>KRA45_HUMAN (Q9BYR2) Keratin-associated protein 4-5 (Keratin-associated protein|
           4.5) (Ultrahigh sulfur keratin-associated protein 4.5)
          Length = 186

 Score = 28.9 bits (63), Expect = 7.9
 Identities = 18/60 (30%), Positives = 21/60 (35%), Gaps = 2/60 (3%)
 Frame = -3

Query: 395 GSFSARS--GESKCALPSCCYTKGATTASSTPCEASYI*SSRICKGEAPTHPKEGRTSCC 222
           GS S+    G   C  PSCC T    T    P          +C      HP    +SCC
Sbjct: 7   GSVSSEQSCGLENCCCPSCCQTTCCRTTCCRPSCCKPQCCQSVCYQPTCCHPSCCISSCC 66


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,890,748
Number of Sequences: 219361
Number of extensions: 1314471
Number of successful extensions: 4317
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3979
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4303
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3523384522
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)