| Clone Name | rbaal4c02 |
|---|---|
| Clone Library Name | barley_pub |
>FOG_DROME (P40795) Protein folded gastrulation precursor [Contains: Protein| folded gastrulation; G protein-coupled receptor ligand] Length = 730 Score = 34.3 bits (77), Expect = 0.087 Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 3/61 (4%) Frame = +3 Query: 48 FHLGDITYLFTNNTTAPYSPSKRTSSDA---EQVPLEDNGDDLQTNSLSGTGYEGDDAVH 218 FH ++ TTA PS T D +P DN D+L TN++ G G + DD H Sbjct: 467 FHYQHFVEDESSTTTATPEPSSSTPGDPIEQSDMPASDN-DNLMTNTIGGRGDDDDDGGH 525 Query: 219 E 221 + Sbjct: 526 K 526
>YRS7_CAEEL (Q10003) Hypothetical protein T05H10.7| Length = 796 Score = 28.9 bits (63), Expect = 3.7 Identities = 13/42 (30%), Positives = 27/42 (64%), Gaps = 2/42 (4%) Frame = +3 Query: 81 NNTTAPYSPSKRTSSDAEQVPLEDNGDDLQ--TNSLSGTGYE 200 NNT+ P+S ++ ++ LE+N DD++ ++ L+ TG++ Sbjct: 747 NNTSPPHSAKLTRNAQSDSALLEENEDDVEHLSDKLNITGFQ 788
>Y442_RICTY (Q68WS4) UPF0082 protein RT0442| Length = 252 Score = 28.5 bits (62), Expect = 4.8 Identities = 14/58 (24%), Positives = 28/58 (48%) Frame = +3 Query: 57 GDITYLFTNNTTAPYSPSKRTSSDAEQVPLEDNGDDLQTNSLSGTGYEGDDAVHELLG 230 G + YLF + Y + ++ D + +E G+D+ +N + T Y + ++ LG Sbjct: 129 GSVNYLFNHCGVIQYPINIASNEDIFEAAIEAGGNDIISNDFAHTIYTDIENFYKALG 186
>VSX2_ORYLA (Q9I9A3) Visual system homeobox 2 (Transcription factor VSX2)| Length = 393 Score = 28.1 bits (61), Expect = 6.3 Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 6/62 (9%) Frame = +3 Query: 78 TNNTTAPYSPSKRTSSDAEQVPLEDNG------DDLQTNSLSGTGYEGDDAVHELLGVVA 239 T AP PS + S D E +G ++++ NS++ + + ++LG V+ Sbjct: 303 TAKCDAPQQPSAQRSEDVEAEEKRSDGKSTISKEEMRENSIAALRAKAQEHSAKVLGTVS 362 Query: 240 PG 245 PG Sbjct: 363 PG 364
>PPBD_BACSU (P42251) Alkaline phosphatase D precursor (EC 3.1.3.1) (APaseD)| Length = 556 Score = 28.1 bits (61), Expect = 6.3 Identities = 14/37 (37%), Positives = 20/37 (54%) Frame = +3 Query: 42 LEFHLGDITYLFTNNTTAPYSPSKRTSSDAEQVPLED 152 L FHLGD Y + N + + RT + AE + L+D Sbjct: 201 LVFHLGDYIYEYGPNEYVSKTGNVRTHNSAEIITLQD 237
>CN140_RAT (Q6AYP4) Protein C14orf140 homolog| Length = 525 Score = 28.1 bits (61), Expect = 6.3 Identities = 12/17 (70%), Positives = 14/17 (82%) Frame = +3 Query: 141 PLEDNGDDLQTNSLSGT 191 P ED GD+LQ +SLSGT Sbjct: 348 PAEDLGDELQASSLSGT 364
>DCL4_ARATH (P84634) Dicer-like protein 4 (EC 3.1.26.-)| Length = 1589 Score = 28.1 bits (61), Expect = 6.3 Identities = 12/33 (36%), Positives = 13/33 (39%) Frame = -3 Query: 201 LHSRCLIESWSADHLHCLREEPALHHCLFAYWV 103 LH C+ W H C EE H F Y V Sbjct: 1513 LHETCVANCWKPPHFECCEEEGPGHLKSFVYKV 1545
>HPPD_DAUCA (O23920) 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)| (4HPPD) (HPD) (HPPDase) (4-hydroxyphenylpyruvic acid oxidase) Length = 442 Score = 27.7 bits (60), Expect = 8.2 Identities = 17/45 (37%), Positives = 21/45 (46%) Frame = +3 Query: 90 TAPYSPSKRTSSDAEQVPLEDNGDDLQTNSLSGTGYEGDDAVHEL 224 TAPYSPS TSS + +P S S +G+ A H L Sbjct: 99 TAPYSPSTTTSSGSAAIP-----------SFSASGFHSFAAKHGL 132 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 27,815,334 Number of Sequences: 219361 Number of extensions: 436177 Number of successful extensions: 1481 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 1459 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1481 length of database: 80,573,946 effective HSP length: 58 effective length of database: 67,851,008 effective search space used: 1628424192 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)