ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal3m24
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_185071.1| Oryza sativa (japonica cultivar-group), mRNA 400 e-108
2gb|BT018892.1| Zea mays clone EL01T0206C07.d mRNA sequence 363 4e-97
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 281 1e-72
4gb|AC093713.6| Oryza sativa chromosome 3 BAC OSJNBa0094F01 genom... 281 1e-72
5dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 281 1e-72
6dbj|AK067956.1| Oryza sativa (japonica cultivar-group) cDNA clon... 226 7e-56
7dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 198 1e-47
8dbj|AP003800.3| Oryza sativa (japonica cultivar-group) genomic D... 198 1e-47
9dbj|AP006681.1| Lotus japonicus genomic DNA, chromosome 1, clone... 50 0.008
10gb|AC079957.5| Mus musculus strain C57BL6/J chromosome 6 clone R... 44 0.52
11emb|X99260.1|BB103G Bacteriophage B103 genomic sequence 44 0.52
12emb|BX897699.1| Bartonella henselae strain Houston-1, complete g... 44 0.52
13gb|AC183539.2| Pan troglodytes BAC clone CH251-340H7 from chromo... 42 2.1
14ref|XM_418827.1| PREDICTED: Gallus gallus similar to KIAA0342 pr... 42 2.1
15gb|AC123037.4| Mus musculus BAC clone RP24-527F14 from chromosom... 42 2.1
16gb|AC118022.12| Mus musculus chromosome 15, clone RP23-459I23, c... 42 2.1
17emb|AL645846.12| Mouse DNA sequence from clone RP23-244C22 on ch... 42 2.1
18gb|AC091565.10| Homo sapiens chromosome 15, clone RP11-228M15, c... 42 2.1
19gb|AC020644.7| Homo sapiens chromosome 10 clone RP11-552O21, com... 42 2.1
20gb|AC018980.10| Homo sapiens chromosome 10 clone RP11-476F14, co... 42 2.1
21gb|AF168681.1| Homo sapiens CRIM1 protein gene, partial cds; and... 42 2.1
22gb|AC138649.2| Homo sapiens chromosome 15, clone RP11-1180F24, c... 42 2.1
23gb|AC007378.4| Homo sapiens BAC clone RP11-78I14 from 2, complet... 42 2.1
24gb|AC055876.16| Homo sapiens chromosome 15, clone RP11-578F21, c... 42 2.1
25gb|AC125159.4| Mus musculus BAC clone RP24-394C23 from 6, comple... 42 2.1
26ref|NM_129441.2| Arabidopsis thaliana ATP binding / GTP binding ... 40 8.1
27gb|BT017853.1| Zea mays clone EL01N0511C02.c mRNA sequence 40 8.1
28gb|AE017346.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 8.1
29gb|AE017354.1| Legionella pneumophila subsp. pneumophila str. Ph... 40 8.1
30ref|XM_425424.1| PREDICTED: Gallus gallus similar to extracellul... 40 8.1
31ref|XM_591829.2| PREDICTED: Bos taurus similar to CG3764-PA (LOC... 40 8.1
32gb|BT012402.1| Arabidopsis thaliana At2g38850 mRNA, complete cds 40 8.1
33gb|BT012131.1| Arabidopsis thaliana At2g38850 mRNA, complete cds 40 8.1
34ref|XM_883751.1| Candida albicans SC5314 hypothetical protein (C... 40 8.1
35ref|XM_716236.1| Candida albicans SC5314 hypothetical protein (C... 40 8.1
36gb|AC121970.2| Mus musculus BAC clone RP24-275B23 from 1, comple... 40 8.1
37gb|AY422215.1| Erwinia amylovora strain UTRJ2 plasmid pEU30 comp... 40 8.1
38ref|XM_721623.1| Plasmodium yoelii yoelii str. 17XNL erythrocyte... 40 8.1
39gb|AC003090.1| Homo sapiens BAC clone CTA-241I2 from 7, complete... 40 8.1
40gb|AC004957.1| Homo sapiens PAC clone RP5-1093O17 from 7, comple... 40 8.1
41emb|AL356266.9| Human DNA sequence from clone RP11-347N5 on chro... 40 8.1
42emb|CR628337.1| Legionella pneumophila str. Lens complete genome 40 8.1
43emb|CR628336.1| Legionella pneumophila str. Paris complete genome 40 8.1
44emb|AL022104.2|SPBC16H5 S.pombe chromosome II cosmid c16H5 40 8.1
45ref|NM_001021847.1| Schizosaccharomyces pombe 972h- hypothetical... 40 8.1
46emb|BX648247.1|HSM808395 Homo sapiens mRNA; cDNA DKFZp686P15108 ... 40 8.1
47gb|AY104326.1| Zea mays PCO064465 mRNA sequence 40 8.1
48gb|AE000666.1| Methanothermobacter thermautotrophicus str. Delta... 40 8.1
49gb|AF090441.1|AF090441 Gallus gallus extracellular reelin (Reln)... 40 8.1
50dbj|AP006852.1| Candida albicans genomic DNA, chromosome 7, comp... 40 8.1 
>ref|NM_185071.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2122

 Score =  400 bits (202), Expect = e-108
 Identities = 423/498 (84%), Gaps = 1/498 (0%)
 Strand = Plus / Minus

                                                                        
Query: 99   cggctgccacgtttccttctagcaaagcaacgccagtaaaaaagccaaaacaatagcaat 158
            |||||||| ||||| |||||| | || || |||||||||| |||||||||  | |  |||
Sbjct: 1751 cggctgccccgttttcttctaccgaaacatcgccagtaaagaagccaaaaagacaataat 1692

                                                                        
Query: 159  agcgatatggggatcgcccatctgtccagatcgagaagtggactgtacacgatggtttcc 218
            |  |  |||||||||||||||||||||||||||||||  || || || ||||| ||||||
Sbjct: 1691 acggcaatggggatcgcccatctgtccagatcgagaatggggctatatacgatagtttcc 1632

                                                                        
Query: 219  caggaagaaacgatgatgtgccaggctggattatagtacaacgattccgctgaccagaac 278
            || ||||| || ||||||||||| ||||||||||||||||| || || ||||||||||||
Sbjct: 1631 cacgaagagacaatgatgtgccaagctggattatagtacaatgactctgctgaccagaac 1572

                                                                        
Query: 279  attctcgtataagtttctaggaagatgaacatcacccaagcagcaatttcaagtaaaaag 338
            || ||||| || || || |||||||||||||||||||| ||| |||| ||||||||||||
Sbjct: 1571 atcctcgtgtacgtctccaggaagatgaacatcacccaggcaacaatctcaagtaaaaag 1512

                                                                        
Query: 339  aacttgatgacaaagcgcccaagcacgaccatgaccagagcgaaggtcaccaaccaattg 398
            ||||||||||||||||||||||  || |||||||| || | |||||| ||||||||||||
Sbjct: 1511 aacttgatgacaaagcgcccaataaccaccatgactagggagaaggttaccaaccaattg 1452

                                                                        
Query: 399  aagagtttgttattgtactccttgatgaaaagagcacgagatttgaggagcatctttgac 458
            ||||| |||||||||||||||||||| |||||||||||||| ||||  ||||||||||||
Sbjct: 1451 aagagcttgttattgtactccttgataaaaagagcacgagacttgacaagcatctttgac 1392

                                                                        
Query: 459  atcctatgctcgtatctttcccttgcaggccccacgcattctgttacaaacgtccgattg 518
            || ||  ||||||| |||||| ||||||| ||||| |||||  |||||||  | ||||||
Sbjct: 1391 attctgcgctcgtagctttcctttgcagggcccacacattcccttacaaaacttcgattg 1332

                                                                        
Query: 519  cagtnnnnnnnnncctgcattgaactttgccatggaaggaagtttcaagacctgaaggtg 578
            ||||         |||||||||||||||||||||||||| || |||||||| ||||||||
Sbjct: 1331 cagt-gaaaaaaccctgcattgaactttgccatggaagggagcttcaagacttgaaggtg 1273

                              
Query: 579  atccatttgatcttcaca 596
             ||||||| |||||||||
Sbjct: 1272 gtccattttatcttcaca 1255
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>gb|BT018892.1| Zea mays clone EL01T0206C07.d mRNA sequence
          Length = 1944

 Score =  363 bits (183), Expect = 4e-97
 Identities = 261/287 (90%)
 Strand = Plus / Minus

                                                                        
Query: 174  gcccatctgtccagatcgagaagtggactgtacacgatggtttcccaggaagaaacgatg 233
            ||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||| |||
Sbjct: 1529 gcccatctgtccagatcaagaattgggctgtacacgatggtttcccaggaagaaacaatg 1470

                                                                        
Query: 234  atgtgccaggctggattatagtacaacgattccgctgaccagaacattctcgtataagtt 293
            |||||||| |||||||||||||||| ||||||||||||||||||||||||||| || || 
Sbjct: 1469 atgtgccaagctggattatagtacagcgattccgctgaccagaacattctcgtgtacgtc 1410

                                                                        
Query: 294  tctaggaagatgaacatcacccaagcagcaatttcaagtaaaaagaacttgatgacaaag 353
            ||||||||||||||||||||||| || || ||||||||||  ||||||||||||||||||
Sbjct: 1409 tctaggaagatgaacatcacccaggcggcgatttcaagtaggaagaacttgatgacaaag 1350

                                                                        
Query: 354  cgcccaagcacgaccatgaccagagcgaaggtcaccaaccaattgaagagtttgttattg 413
            ||||| |  || |||||||||| || ||||||||||||||||||||| || |||||||||
Sbjct: 1349 cgcccgatgaccaccatgaccaaagagaaggtcaccaaccaattgaaaagcttgttattg 1290

                                                           
Query: 414  tactccttgatgaaaagagcacgagatttgaggagcatctttgacat 460
            |||||||||||||||||||||||||| |||   ||||||||||||||
Sbjct: 1289 tactccttgatgaaaagagcacgagacttggcaagcatctttgacat 1243



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 60/65 (92%)
 Strand = Plus / Minus

                                                                        
Query: 532  cctgcattgaactttgccatggaaggaagtttcaagacctgaaggtgatccatttgatct 591
            ||||||||||| |||||||| ||||||||||||||||| |||||||||||||| | ||||
Sbjct: 1172 cctgcattgaattttgccatcgaaggaagtttcaagacttgaaggtgatccatcttatct 1113

                 
Query: 592  tcaca 596
            |||||
Sbjct: 1112 tcaca 1108
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  281 bits (142), Expect = 1e-72
 Identities = 241/274 (87%)
 Strand = Plus / Minus

                                                                            
Query: 180      ctgtccagatcgagaagtggactgtacacgatggtttcccaggaagaaacgatgatgtgc 239
                ||||||||||||||||  || || || ||||| |||||||| ||||| || |||||||||
Sbjct: 32882585 ctgtccagatcgagaatggggctatatacgatagtttcccacgaagagacaatgatgtgc 32882526

                                                                            
Query: 240      caggctggattatagtacaacgattccgctgaccagaacattctcgtataagtttctagg 299
                || ||||||||||||||||| || || |||||||||||||| ||||| || || || |||
Sbjct: 32882525 caagctggattatagtacaatgactctgctgaccagaacatcctcgtgtacgtctccagg 32882466

                                                                            
Query: 300      aagatgaacatcacccaagcagcaatttcaagtaaaaagaacttgatgacaaagcgccca 359
                ||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||
Sbjct: 32882465 aagatgaacatcacccaggcaacaatctcaagtaaaaagaacttgatgacaaagcgccca 32882406

                                                                            
Query: 360      agcacgaccatgaccagagcgaaggtcaccaaccaattgaagagtttgttattgtactcc 419
                |  || |||||||| || | |||||| ||||||||||||||||| |||||||||||||||
Sbjct: 32882405 ataaccaccatgactagggagaaggttaccaaccaattgaagagcttgttattgtactcc 32882346

                                                  
Query: 420      ttgatgaaaagagcacgagatttgaggagcatct 453
                ||||| |||||||||||||| ||||  |||||||
Sbjct: 32882345 ttgataaaaagagcacgagacttgacaagcatct 32882312



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 60/65 (92%)
 Strand = Plus / Minus

                                                                            
Query: 532      cctgcattgaactttgccatggaaggaagtttcaagacctgaaggtgatccatttgatct 591
                |||||||||||||||||||||||||| || |||||||| |||||||| ||||||| ||||
Sbjct: 32881721 cctgcattgaactttgccatggaagggagcttcaagacttgaaggtggtccattttatct 32881662

                     
Query: 592      tcaca 596
                |||||
Sbjct: 32881661 tcaca 32881657
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>gb|AC093713.6| Oryza sativa chromosome 3 BAC OSJNBa0094F01 genomic sequence, complete
              sequence
          Length = 151479

 Score =  281 bits (142), Expect = 1e-72
 Identities = 241/274 (87%)
 Strand = Plus / Plus

                                                                          
Query: 180    ctgtccagatcgagaagtggactgtacacgatggtttcccaggaagaaacgatgatgtgc 239
              ||||||||||||||||  || || || ||||| |||||||| ||||| || |||||||||
Sbjct: 107590 ctgtccagatcgagaatggggctatatacgatagtttcccacgaagagacaatgatgtgc 107649

                                                                          
Query: 240    caggctggattatagtacaacgattccgctgaccagaacattctcgtataagtttctagg 299
              || ||||||||||||||||| || || |||||||||||||| ||||| || || || |||
Sbjct: 107650 caagctggattatagtacaatgactctgctgaccagaacatcctcgtgtacgtctccagg 107709

                                                                          
Query: 300    aagatgaacatcacccaagcagcaatttcaagtaaaaagaacttgatgacaaagcgccca 359
              ||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||
Sbjct: 107710 aagatgaacatcacccaggcaacaatctcaagtaaaaagaacttgatgacaaagcgccca 107769

                                                                          
Query: 360    agcacgaccatgaccagagcgaaggtcaccaaccaattgaagagtttgttattgtactcc 419
              |  || |||||||| || | |||||| ||||||||||||||||| |||||||||||||||
Sbjct: 107770 ataaccaccatgactagggagaaggttaccaaccaattgaagagcttgttattgtactcc 107829

                                                
Query: 420    ttgatgaaaagagcacgagatttgaggagcatct 453
              ||||| |||||||||||||| ||||  |||||||
Sbjct: 107830 ttgataaaaagagcacgagacttgacaagcatct 107863



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 60/65 (92%)
 Strand = Plus / Plus

                                                                          
Query: 532    cctgcattgaactttgccatggaaggaagtttcaagacctgaaggtgatccatttgatct 591
              |||||||||||||||||||||||||| || |||||||| |||||||| ||||||| ||||
Sbjct: 108454 cctgcattgaactttgccatggaagggagcttcaagacttgaaggtggtccattttatct 108513

                   
Query: 592    tcaca 596
              |||||
Sbjct: 108514 tcaca 108518
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  281 bits (142), Expect = 1e-72
 Identities = 241/274 (87%)
 Strand = Plus / Minus

                                                                            
Query: 180      ctgtccagatcgagaagtggactgtacacgatggtttcccaggaagaaacgatgatgtgc 239
                ||||||||||||||||  || || || ||||| |||||||| ||||| || |||||||||
Sbjct: 32973095 ctgtccagatcgagaatggggctatatacgatagtttcccacgaagagacaatgatgtgc 32973036

                                                                            
Query: 240      caggctggattatagtacaacgattccgctgaccagaacattctcgtataagtttctagg 299
                || ||||||||||||||||| || || |||||||||||||| ||||| || || || |||
Sbjct: 32973035 caagctggattatagtacaatgactctgctgaccagaacatcctcgtgtacgtctccagg 32972976

                                                                            
Query: 300      aagatgaacatcacccaagcagcaatttcaagtaaaaagaacttgatgacaaagcgccca 359
                ||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||
Sbjct: 32972975 aagatgaacatcacccaggcaacaatctcaagtaaaaagaacttgatgacaaagcgccca 32972916

                                                                            
Query: 360      agcacgaccatgaccagagcgaaggtcaccaaccaattgaagagtttgttattgtactcc 419
                |  || |||||||| || | |||||| ||||||||||||||||| |||||||||||||||
Sbjct: 32972915 ataaccaccatgactagggagaaggttaccaaccaattgaagagcttgttattgtactcc 32972856

                                                  
Query: 420      ttgatgaaaagagcacgagatttgaggagcatct 453
                ||||| |||||||||||||| ||||  |||||||
Sbjct: 32972855 ttgataaaaagagcacgagacttgacaagcatct 32972822



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 60/65 (92%)
 Strand = Plus / Minus

                                                                            
Query: 532      cctgcattgaactttgccatggaaggaagtttcaagacctgaaggtgatccatttgatct 591
                |||||||||||||||||||||||||| || |||||||| |||||||| ||||||| ||||
Sbjct: 32972231 cctgcattgaactttgccatggaagggagcttcaagacttgaaggtggtccattttatct 32972172

                     
Query: 592      tcaca 596
                |||||
Sbjct: 32972171 tcaca 32972167
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>dbj|AK067956.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013127B03, full
            insert sequence
          Length = 2380

 Score =  226 bits (114), Expect = 7e-56
 Identities = 273/326 (83%)
 Strand = Plus / Minus

                                                                        
Query: 168  gggatcgcccatctgtccagatcgagaagtggactgtacacgatggtttcccaggaagaa 227
            |||||| |||||||||| | ||| |||| |||  | ||||| ||||||||||| ||||| 
Sbjct: 1883 gggatcacccatctgtcaatatcaagaactgggttatacacaatggtttcccatgaagag 1824

                                                                        
Query: 228  acgatgatgtgccaggctggattatagtacaacgattccgctgaccagaacattctcgta 287
            ||||| |||||||||   ||||| ||||||||| |||| |  |||||||| | |||||| 
Sbjct: 1823 acgatcatgtgccagatgggattgtagtacaacaattctgacgaccagaataatctcgtg 1764

                                                                        
Query: 288  taagtttctaggaagatgaacatcacccaagcagcaatttcaagtaaaaagaacttgatg 347
            || || |||| ||||||||| |||||||| ||||||| ||| ||||||||||||||||| 
Sbjct: 1763 tatgtctctaagaagatgaatatcacccatgcagcaacttcgagtaaaaagaacttgatc 1704

                                                                        
Query: 348  acaaagcgcccaagcacgaccatgaccagagcgaaggtcaccaaccaattgaagagtttg 407
            ||||||||| ||| ||| | ||||||||  | ||| ||||||| ||||||||| ||||||
Sbjct: 1703 acaaagcgcgcaatcacaatcatgaccaaggagaacgtcaccagccaattgaatagtttg 1644

                                                                        
Query: 408  ttattgtactccttgatgaaaagagcacgagatttgaggagcatctttgacatcctatgc 467
            || |||||||||||||||||||||||||||||  |   ||||||||||||||||||| | 
Sbjct: 1643 ttgttgtactccttgatgaaaagagcacgagaccttgcgagcatctttgacatcctacgt 1584

                                      
Query: 468  tcgtatctttcccttgcaggccccac 493
            || || |||||| | |||||||||||
Sbjct: 1583 tcatagctttccttggcaggccccac 1558
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score =  198 bits (100), Expect = 1e-47
 Identities = 202/236 (85%)
 Strand = Plus / Minus

                                                                           
Query: 204     tacacgatggtttcccaggaagaaacgatgatgtgccaggctggattatagtacaacgat 263
               ||||| ||||||||||| ||||| ||||| |||||||||   ||||| ||||||||| ||
Sbjct: 4350350 tacacaatggtttcccatgaagagacgatcatgtgccagatgggattgtagtacaacaat 4350291

                                                                           
Query: 264     tccgctgaccagaacattctcgtataagtttctaggaagatgaacatcacccaagcagca 323
               || |  |||||||| | |||||| || || |||| ||||||||| |||||||| ||||||
Sbjct: 4350290 tctgacgaccagaataatctcgtgtatgtctctaagaagatgaatatcacccatgcagca 4350231

                                                                           
Query: 324     atttcaagtaaaaagaacttgatgacaaagcgcccaagcacgaccatgaccagagcgaag 383
               | ||| ||||||||||||||||| ||||||||| ||| ||| | ||||||||  | ||| 
Sbjct: 4350230 acttcgagtaaaaagaacttgatcacaaagcgcgcaatcacaatcatgaccaaggagaac 4350171

                                                                       
Query: 384     gtcaccaaccaattgaagagtttgttattgtactccttgatgaaaagagcacgaga 439
               ||||||| ||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 4350170 gtcaccagccaattgaatagtttgttgttgtactccttgatgaaaagagcacgaga 4350115
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>dbj|AP003800.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1014_E09
          Length = 184624

 Score =  198 bits (100), Expect = 1e-47
 Identities = 202/236 (85%)
 Strand = Plus / Minus

                                                                          
Query: 204    tacacgatggtttcccaggaagaaacgatgatgtgccaggctggattatagtacaacgat 263
              ||||| ||||||||||| ||||| ||||| |||||||||   ||||| ||||||||| ||
Sbjct: 171404 tacacaatggtttcccatgaagagacgatcatgtgccagatgggattgtagtacaacaat 171345

                                                                          
Query: 264    tccgctgaccagaacattctcgtataagtttctaggaagatgaacatcacccaagcagca 323
              || |  |||||||| | |||||| || || |||| ||||||||| |||||||| ||||||
Sbjct: 171344 tctgacgaccagaataatctcgtgtatgtctctaagaagatgaatatcacccatgcagca 171285

                                                                          
Query: 324    atttcaagtaaaaagaacttgatgacaaagcgcccaagcacgaccatgaccagagcgaag 383
              | ||| ||||||||||||||||| ||||||||| ||| ||| | ||||||||  | ||| 
Sbjct: 171284 acttcgagtaaaaagaacttgatcacaaagcgcgcaatcacaatcatgaccaaggagaac 171225

                                                                      
Query: 384    gtcaccaaccaattgaagagtttgttattgtactccttgatgaaaagagcacgaga 439
              ||||||| ||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 171224 gtcaccagccaattgaatagtttgttgttgtactccttgatgaaaagagcacgaga 171169
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>dbj|AP006681.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT45D03, TM0375b,
             complete sequence
          Length = 61653

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                         
Query: 357   ccaagcacgaccatgaccagagcgaaggtcaccaaccaattgaagagtttgttattgtac 416
             |||| ||| ||||||||||| | ||||| ||||||||||||||| ||  |||  ||||||
Sbjct: 17813 ccaatcactaccatgaccagggagaaggccaccaaccaattgaaaagcctgtggttgtac 17872

                  
Query: 417   tcctt 421
             |||||
Sbjct: 17873 tcctt 17877
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>gb|AC079957.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-144I17, complete
             sequence
          Length = 196474

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 412   tgtactccttgatgaaaagagc 433
             ||||||||||||||||||||||
Sbjct: 48447 tgtactccttgatgaaaagagc 48426
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>emb|X99260.1|BB103G Bacteriophage B103 genomic sequence
          Length = 18630

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 245   tggattatagtacaacgattcc 266
             ||||||||||||||||||||||
Sbjct: 15996 tggattatagtacaacgattcc 15975
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>emb|BX897699.1| Bartonella henselae strain Houston-1, complete genome
          Length = 1931047

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 132     cagtaaaaaagccaaaacaata 153
               ||||||||||||||||||||||
Sbjct: 1367299 cagtaaaaaagccaaaacaata 1367320
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>gb|AC183539.2| Pan troglodytes BAC clone CH251-340H7 from chromosome 15, complete
              sequence
          Length = 155024

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 323    aatttcaagtaaaaagaactt 343
              |||||||||||||||||||||
Sbjct: 143162 aatttcaagtaaaaagaactt 143182
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>ref|XM_418827.1| PREDICTED: Gallus gallus similar to KIAA0342 protein (LOC420728),
            mRNA
          Length = 12717

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 14   ctccctgcagaaacaaagcct 34
            |||||||||||||||||||||
Sbjct: 7537 ctccctgcagaaacaaagcct 7517
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>gb|AC123037.4| Mus musculus BAC clone RP24-527F14 from chromosome 6, complete sequence
          Length = 137122

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 568    acctgaaggtgatccatttga 588
              |||||||||||||||||||||
Sbjct: 135747 acctgaaggtgatccatttga 135767
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>gb|AC118022.12| Mus musculus chromosome 15, clone RP23-459I23, complete sequence
          Length = 190653

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 44    tgatcttgggcgattggagttcttg 68
             ||||||||||| |||||||||||||
Sbjct: 83384 tgatcttgggccattggagttcttg 83408
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>emb|AL645846.12| Mouse DNA sequence from clone RP23-244C22 on chromosome 11 Contains a
              novel gene, the Tob1 gene for transducer of ErbB-2.1, the
              gene for a novel protein (AY100450) (WFIKKN-like growth and
              differentiation factor-associated serum protein 1) (Gasp1),
              a novel gene, the gene for a novel protein (3300001P08Rik)
              (Luc7a) and one CpG island, complete sequence
          Length = 188962

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 557    gaagtttcaagacctgaaggtgatc 581
              ||||||||||| |||||||||||||
Sbjct: 137445 gaagtttcaaggcctgaaggtgatc 137469
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>gb|AC091565.10| Homo sapiens chromosome 15, clone RP11-228M15, complete sequence
          Length = 180741

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 323 aatttcaagtaaaaagaactt 343
           |||||||||||||||||||||
Sbjct: 539 aatttcaagtaaaaagaactt 559
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>gb|AC020644.7| Homo sapiens chromosome 10 clone RP11-552O21, complete sequence
          Length = 197720

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 429   agagcacgagatttgaggagcatct 453
             |||||||||| ||||||||||||||
Sbjct: 84532 agagcacgagttttgaggagcatct 84556
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>gb|AC018980.10| Homo sapiens chromosome 10 clone RP11-476F14, complete sequence
          Length = 197709

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 429   agagcacgagatttgaggagcatct 453
             |||||||||| ||||||||||||||
Sbjct: 84530 agagcacgagttttgaggagcatct 84554
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>gb|AF168681.1| Homo sapiens CRIM1 protein gene, partial cds; and FEZ2 gene, partial
             sequence
          Length = 236303

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 367   ccatgaccagagcgaaggtca 387
             |||||||||||||||||||||
Sbjct: 87218 ccatgaccagagcgaaggtca 87238
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>gb|AC138649.2| Homo sapiens chromosome 15, clone RP11-1180F24, complete sequence
          Length = 151800

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 323   aatttcaagtaaaaagaactt 343
             |||||||||||||||||||||
Sbjct: 72895 aatttcaagtaaaaagaactt 72875
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>gb|AC007378.4| Homo sapiens BAC clone RP11-78I14 from 2, complete sequence
          Length = 179357

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 367   ccatgaccagagcgaaggtca 387
             |||||||||||||||||||||
Sbjct: 91944 ccatgaccagagcgaaggtca 91924
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>gb|AC055876.16| Homo sapiens chromosome 15, clone RP11-578F21, complete sequence
          Length = 192533

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 323    aatttcaagtaaaaagaactt 343
              |||||||||||||||||||||
Sbjct: 104588 aatttcaagtaaaaagaactt 104568
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>gb|AC125159.4| Mus musculus BAC clone RP24-394C23 from 6, complete sequence
          Length = 190966

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 568   acctgaaggtgatccatttga 588
             |||||||||||||||||||||
Sbjct: 44404 acctgaaggtgatccatttga 44424
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>ref|NM_129441.2| Arabidopsis thaliana ATP binding / GTP binding / GTPase AT2G38840
            mRNA, complete cds
          Length = 2281

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                    
Query: 171  atcgcccatctgtccagatcgagaagtggactgtacacga 210
            ||||||||||||||||  |||||||  ||||| |||||||
Sbjct: 1907 atcgcccatctgtccaagtcgagaacaggactatacacga 1868
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>gb|BT017853.1| Zea mays clone EL01N0511C02.c mRNA sequence
          Length = 882

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 428 aagagcacgagatttgagga 447
           ||||||||||||||||||||
Sbjct: 60  aagagcacgagatttgagga 79
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>gb|AE017346.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 6, complete
               sequence
          Length = 1438950

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 339     aacttgatgacaaagcgccc 358
               ||||||||||||||||||||
Sbjct: 1137092 aacttgatgacaaagcgccc 1137111
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>gb|AE017354.1| Legionella pneumophila subsp. pneumophila str. Philadelphia 1, complete
              genome
          Length = 3397754

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 130    gccagtaaaaaagccaaaacaata 153
              |||| |||||||||||||||||||
Sbjct: 812050 gccaataaaaaagccaaaacaata 812027
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>ref|XM_425424.1| PREDICTED: Gallus gallus similar to extracellular reelin (LOC427850),
            mRNA
          Length = 12363

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 304  tgaacatcacccaagcagca 323
            ||||||||||||||||||||
Sbjct: 7896 tgaacatcacccaagcagca 7915
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>ref|XM_591829.2| PREDICTED: Bos taurus similar to CG3764-PA (LOC514041), mRNA
          Length = 3006

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 365  gaccatgaccagagcgaagg 384
            ||||||||||||||||||||
Sbjct: 2479 gaccatgaccagagcgaagg 2498
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>gb|BT012402.1| Arabidopsis thaliana At2g38850 mRNA, complete cds
          Length = 546

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 171 atcgcccatctgtccagatcgagaagtggactgtacacga 210
           ||||||||||||||||  |||||||  ||||| |||||||
Sbjct: 413 atcgcccatctgtccaagtcgagaacaggactatacacga 374
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>gb|BT012131.1| Arabidopsis thaliana At2g38850 mRNA, complete cds
          Length = 939

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 171 atcgcccatctgtccagatcgagaagtggactgtacacga 210
           ||||||||||||||||  |||||||  ||||| |||||||
Sbjct: 465 atcgcccatctgtccaagtcgagaacaggactatacacga 426
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>ref|XM_883751.1| Candida albicans SC5314 hypothetical protein (CaJ7.0262) partial
           mRNA
          Length = 1710

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 147 aacaatagcaatagcgatat 166
           ||||||||||||||||||||
Sbjct: 529 aacaatagcaatagcgatat 548
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>ref|XM_716236.1| Candida albicans SC5314 hypothetical protein (CaO19.6488) partial
           mRNA
          Length = 1710

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 147 aacaatagcaatagcgatat 166
           ||||||||||||||||||||
Sbjct: 529 aacaatagcaatagcgatat 548
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>gb|AC121970.2| Mus musculus BAC clone RP24-275B23 from 1, complete sequence
          Length = 179612

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 140   aagccaaaacaatagcaata 159
             ||||||||||||||||||||
Sbjct: 39905 aagccaaaacaatagcaata 39924
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>gb|AY422215.1| Erwinia amylovora strain UTRJ2 plasmid pEU30 complete sequence
          Length = 30314

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 207   acgatggtttcccaggaaga 226
             ||||||||||||||||||||
Sbjct: 25308 acgatggtttcccaggaaga 25327
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>ref|XM_721623.1| Plasmodium yoelii yoelii str. 17XNL erythrocyte membrane protein
           (PY06125) partial mRNA
          Length = 4998

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 147 aacaatagcaatagcgatat 166
           ||||||||||||||||||||
Sbjct: 481 aacaatagcaatagcgatat 500



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 147 aacaatagcaatagcgatat 166
           ||||||||||||||||||||
Sbjct: 193 aacaatagcaatagcgatat 212
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>gb|AC003090.1| Homo sapiens BAC clone CTA-241I2 from 7, complete sequence
          Length = 94255

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 551   tggaaggaagtttcaagacc 570
             ||||||||||||||||||||
Sbjct: 28412 tggaaggaagtttcaagacc 28431
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>gb|AC004957.1| Homo sapiens PAC clone RP5-1093O17 from 7, complete sequence
          Length = 160687

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 59     ggagttcttgtgagagttct 78
              ||||||||||||||||||||
Sbjct: 126794 ggagttcttgtgagagttct 126813
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>emb|AL356266.9| Human DNA sequence from clone RP11-347N5 on chromosome 13 Contains a
             ribosomal protein L39 (RPL39) pseudogene and the 3' end of
             a novel gene, complete sequence
          Length = 105247

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 321   gcaatttcaagtaaaaagaa 340
             ||||||||||||||||||||
Sbjct: 84586 gcaatttcaagtaaaaagaa 84567
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>emb|CR628337.1| Legionella pneumophila str. Lens complete genome
          Length = 3345687

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 130    gccagtaaaaaagccaaaacaata 153
              |||| |||||||||||||||||||
Sbjct: 885140 gccaataaaaaagccaaaacaata 885117
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>emb|CR628336.1| Legionella pneumophila str. Paris complete genome
          Length = 3503610

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 130    gccagtaaaaaagccaaaacaata 153
              |||| |||||||||||||||||||
Sbjct: 904551 gccaataaaaaagccaaaacaata 904528
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>emb|AL022104.2|SPBC16H5 S.pombe chromosome II cosmid c16H5
          Length = 35660

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 420   ttgatgaaaagagcacgaga 439
             ||||||||||||||||||||
Sbjct: 16087 ttgatgaaaagagcacgaga 16068
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>ref|NM_001021847.1| Schizosaccharomyces pombe 972h- hypothetical protein
           (SPBC16H5.08c), partial mRNA
          Length = 1857

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 420 ttgatgaaaagagcacgaga 439
           ||||||||||||||||||||
Sbjct: 713 ttgatgaaaagagcacgaga 694
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>emb|BX648247.1|HSM808395 Homo sapiens mRNA; cDNA DKFZp686P15108 (from clone DKFZp686P15108)
          Length = 7737

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 551  tggaaggaagtttcaagacc 570
            ||||||||||||||||||||
Sbjct: 3502 tggaaggaagtttcaagacc 3483
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>gb|AY104326.1| Zea mays PCO064465 mRNA sequence
          Length = 879

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 428 aagagcacgagatttgagga 447
           ||||||||||||||||||||
Sbjct: 176 aagagcacgagatttgagga 195
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>gb|AE000666.1| Methanothermobacter thermautotrophicus str. Delta H, complete genome
          Length = 1751377

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 25      aacaaagcctgtgatcgtct 44
               ||||||||||||||||||||
Sbjct: 1729104 aacaaagcctgtgatcgtct 1729085
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>gb|AF090441.1|AF090441 Gallus gallus extracellular reelin (Reln) mRNA, partial cds
          Length = 10634

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 304  tgaacatcacccaagcagca 323
            ||||||||||||||||||||
Sbjct: 5461 tgaacatcacccaagcagca 5480
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>dbj|AP006852.1| Candida albicans genomic DNA, chromosome 7, complete sequence
          Length = 949626

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 147    aacaatagcaatagcgatat 166
              ||||||||||||||||||||
Sbjct: 489828 aacaatagcaatagcgatat 489847


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,344,651
Number of Sequences: 3902068
Number of extensions: 5344651
Number of successful extensions: 96861
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 96533
Number of HSP's gapped (non-prelim): 327
length of query: 596
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 573
effective length of database: 17,143,297,704
effective search space: 9823109584392
effective search space used: 9823109584392
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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