ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbaal3m21 |
|---|---|
| Clone Library Name | barley_pub |
>RBS_HORVU (Q40004) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 174 Score = 48.9 bits (115), Expect = 4e-06 Identities = 21/22 (95%), Positives = 21/22 (95%) Frame = -3 Query: 66 VSNGGXIRCMQVWPIEGIKKFE 1 VSNGG IRCMQVWPIEGIKKFE Sbjct: 38 VSNGGRIRCMQVWPIEGIKKFE 59
>RBS1_WHEAT (P00871) Ribulose bisphosphate carboxylase small chain PWS4.3,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit PWS4.3) Length = 174 Score = 48.9 bits (115), Expect = 4e-06 Identities = 21/22 (95%), Positives = 21/22 (95%) Frame = -3 Query: 66 VSNGGXIRCMQVWPIEGIKKFE 1 VSNGG IRCMQVWPIEGIKKFE Sbjct: 38 VSNGGRIRCMQVWPIEGIKKFE 59
>RBS_AEGTA (Q38793) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 175 Score = 48.9 bits (115), Expect = 4e-06 Identities = 21/22 (95%), Positives = 21/22 (95%) Frame = -3 Query: 66 VSNGGXIRCMQVWPIEGIKKFE 1 VSNGG IRCMQVWPIEGIKKFE Sbjct: 39 VSNGGRIRCMQVWPIEGIKKFE 60
>RBS3_ORYSA (P18567) Ribulose bisphosphate carboxylase small chain C,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit C) Length = 175 Score = 48.9 bits (115), Expect = 4e-06 Identities = 21/22 (95%), Positives = 21/22 (95%) Frame = -3 Query: 66 VSNGGXIRCMQVWPIEGIKKFE 1 VSNGG IRCMQVWPIEGIKKFE Sbjct: 39 VSNGGRIRCMQVWPIEGIKKFE 60
>RBS2_WHEAT (P26667) Ribulose bisphosphate carboxylase small chain PW9,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit PW9) Length = 175 Score = 48.9 bits (115), Expect = 4e-06 Identities = 21/22 (95%), Positives = 21/22 (95%) Frame = -3 Query: 66 VSNGGXIRCMQVWPIEGIKKFE 1 VSNGG IRCMQVWPIEGIKKFE Sbjct: 39 VSNGGRIRCMQVWPIEGIKKFE 60
>RBS1_ORYSA (P05347) Ribulose bisphosphate carboxylase small chain,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 172 Score = 43.9 bits (102), Expect = 1e-04 Identities = 18/20 (90%), Positives = 19/20 (95%) Frame = -3 Query: 60 NGGXIRCMQVWPIEGIKKFE 1 +GG IRCMQVWPIEGIKKFE Sbjct: 39 HGGRIRCMQVWPIEGIKKFE 58
>RBS_MUSAC (O24045) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 180 Score = 43.5 bits (101), Expect = 2e-04 Identities = 16/21 (76%), Positives = 20/21 (95%) Frame = -3 Query: 63 SNGGXIRCMQVWPIEGIKKFE 1 SNGG ++CM+VWPIEG+KKFE Sbjct: 51 SNGGRVQCMKVWPIEGVKKFE 71
>RBS2_ORYSA (P18566) Ribulose bisphosphate carboxylase small chain A,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit A) Length = 175 Score = 43.5 bits (101), Expect = 2e-04 Identities = 19/22 (86%), Positives = 20/22 (90%) Frame = -3 Query: 66 VSNGGXIRCMQVWPIEGIKKFE 1 VSNGG I+ MQVWPIEGIKKFE Sbjct: 39 VSNGGRIKFMQVWPIEGIKKFE 60
>RBS_MAIZE (P05348) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 170 Score = 41.6 bits (96), Expect = 7e-04 Identities = 18/22 (81%), Positives = 18/22 (81%) Frame = -3 Query: 66 VSNGGXIRCMQVWPIEGIKKFE 1 VSNGG IRCMQVWP G KKFE Sbjct: 39 VSNGGRIRCMQVWPAYGNKKFE 60
>RBS_SACHY (Q41373) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 168 Score = 41.6 bits (96), Expect = 7e-04 Identities = 18/22 (81%), Positives = 18/22 (81%) Frame = -3 Query: 66 VSNGGXIRCMQVWPIEGIKKFE 1 VSNGG IRCMQVWP G KKFE Sbjct: 38 VSNGGRIRCMQVWPAYGNKKFE 59
>RBS6_LEMGI (P19312) Ribulose bisphosphate carboxylase small chain SSU5B,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit SSU5B) Length = 177 Score = 41.2 bits (95), Expect = 8e-04 Identities = 16/21 (76%), Positives = 18/21 (85%) Frame = -3 Query: 63 SNGGXIRCMQVWPIEGIKKFE 1 SNGG + CMQVWP EG+KKFE Sbjct: 50 SNGGRVSCMQVWPPEGLKKFE 70
>RBS5_LEMGI (P19311) Ribulose bisphosphate carboxylase small chain SSU5A,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit SSU5A) Length = 177 Score = 41.2 bits (95), Expect = 8e-04 Identities = 16/21 (76%), Positives = 18/21 (85%) Frame = -3 Query: 63 SNGGXIRCMQVWPIEGIKKFE 1 SNGG + CMQVWP EG+KKFE Sbjct: 50 SNGGRVSCMQVWPPEGLKKFE 70
>RBS4_LEMGI (P19310) Ribulose bisphosphate carboxylase small chain SSU40B,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit SSU40B) Length = 177 Score = 41.2 bits (95), Expect = 8e-04 Identities = 16/21 (76%), Positives = 18/21 (85%) Frame = -3 Query: 63 SNGGXIRCMQVWPIEGIKKFE 1 SNGG + CMQVWP EG+KKFE Sbjct: 50 SNGGRVSCMQVWPPEGLKKFE 70
>RBS2_LEMGI (P19308) Ribulose bisphosphate carboxylase small chain SSU26,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit SSU26) Length = 177 Score = 41.2 bits (95), Expect = 8e-04 Identities = 16/21 (76%), Positives = 18/21 (85%) Frame = -3 Query: 63 SNGGXIRCMQVWPIEGIKKFE 1 SNGG + CMQVWP EG+KKFE Sbjct: 50 SNGGKVSCMQVWPPEGLKKFE 70
>RBS5_FRIAG (O22645) Ribulose bisphosphate carboxylase small chain 5,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 5) Length = 179 Score = 40.4 bits (93), Expect = 0.001 Identities = 15/21 (71%), Positives = 19/21 (90%) Frame = -3 Query: 63 SNGGXIRCMQVWPIEGIKKFE 1 SNGG ++CM+VWPI G+KKFE Sbjct: 52 SNGGRVQCMKVWPIVGLKKFE 72
>RBS3_FRIAG (O22573) Ribulose bisphosphate carboxylase small chain 3,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 3) Length = 179 Score = 40.4 bits (93), Expect = 0.001 Identities = 15/21 (71%), Positives = 19/21 (90%) Frame = -3 Query: 63 SNGGXIRCMQVWPIEGIKKFE 1 SNGG ++CM+VWPI G+KKFE Sbjct: 52 SNGGRVQCMKVWPIVGLKKFE 72
>RBS2_FRIAG (O22572) Ribulose bisphosphate carboxylase small chain 2,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 2) Length = 179 Score = 40.4 bits (93), Expect = 0.001 Identities = 15/21 (71%), Positives = 19/21 (90%) Frame = -3 Query: 63 SNGGXIRCMQVWPIEGIKKFE 1 SNGG ++CM+VWPI G+KKFE Sbjct: 52 SNGGRVQCMKVWPIVGLKKFE 72
>RBS1_FRIAG (O24634) Ribulose bisphosphate carboxylase small chain 1/4,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 1/4) Length = 179 Score = 40.4 bits (93), Expect = 0.001 Identities = 15/21 (71%), Positives = 19/21 (90%) Frame = -3 Query: 63 SNGGXIRCMQVWPIEGIKKFE 1 SNGG ++CM+VWPI G+KKFE Sbjct: 52 SNGGRVQCMKVWPIVGLKKFE 72
>RBS3_LEMGI (P19309) Ribulose bisphosphate carboxylase small chain SSU40A,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit SSU40A) Length = 177 Score = 39.7 bits (91), Expect = 0.002 Identities = 15/20 (75%), Positives = 17/20 (85%) Frame = -3 Query: 60 NGGXIRCMQVWPIEGIKKFE 1 NGG + CMQVWP EG+KKFE Sbjct: 51 NGGRVSCMQVWPPEGLKKFE 70
>RBS1_LEMGI (P00872) Ribulose bisphosphate carboxylase small chain SSU1,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit SSU1) Length = 173 Score = 39.3 bits (90), Expect = 0.003 Identities = 15/21 (71%), Positives = 18/21 (85%) Frame = -3 Query: 63 SNGGXIRCMQVWPIEGIKKFE 1 S+GG + CMQVWP EG+KKFE Sbjct: 46 SSGGRVSCMQVWPPEGLKKFE 66
>RBS_BETVE (Q96542) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 182 Score = 38.9 bits (89), Expect = 0.004 Identities = 15/21 (71%), Positives = 18/21 (85%) Frame = -3 Query: 63 SNGGXIRCMQVWPIEGIKKFE 1 SNGG ++CMQVWP G+KKFE Sbjct: 52 SNGGRVQCMQVWPPLGLKKFE 72
>RBS_PYRPY (P24007) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 183 Score = 38.9 bits (89), Expect = 0.004 Identities = 15/21 (71%), Positives = 18/21 (85%) Frame = -3 Query: 63 SNGGXIRCMQVWPIEGIKKFE 1 SNGG ++CMQVWP G+KKFE Sbjct: 53 SNGGRVQCMQVWPPLGLKKFE 73
>RBS_MALSP (Q02980) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 183 Score = 38.9 bits (89), Expect = 0.004 Identities = 15/21 (71%), Positives = 18/21 (85%) Frame = -3 Query: 63 SNGGXIRCMQVWPIEGIKKFE 1 SNGG ++CMQVWP G+KKFE Sbjct: 53 SNGGRVQCMQVWPPLGLKKFE 73
>RBS_GLYTO (Q42822) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 178 Score = 38.5 bits (88), Expect = 0.006 Identities = 15/21 (71%), Positives = 17/21 (80%) Frame = -3 Query: 63 SNGGXIRCMQVWPIEGIKKFE 1 SNGG ++CMQVWP G KKFE Sbjct: 48 SNGGRVQCMQVWPTTGKKKFE 68
>RBS_GLYTA (Q42823) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 178 Score = 38.5 bits (88), Expect = 0.006 Identities = 15/21 (71%), Positives = 17/21 (80%) Frame = -3 Query: 63 SNGGXIRCMQVWPIEGIKKFE 1 SNGG ++CMQVWP G KKFE Sbjct: 48 SNGGRVQCMQVWPTTGKKKFE 68
>RBS4_MESCR (Q08184) Ribulose bisphosphate carboxylase small chain 4,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 4) Length = 183 Score = 38.5 bits (88), Expect = 0.006 Identities = 15/21 (71%), Positives = 18/21 (85%) Frame = -3 Query: 63 SNGGXIRCMQVWPIEGIKKFE 1 SNGG ++CMQVWP G+KKFE Sbjct: 51 SNGGRVQCMQVWPPLGMKKFE 71
>RBS_MANES (Q42915) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 182 Score = 37.7 bits (86), Expect = 0.009 Identities = 14/21 (66%), Positives = 18/21 (85%) Frame = -3 Query: 63 SNGGXIRCMQVWPIEGIKKFE 1 SNGG ++CM+VWP G+KKFE Sbjct: 52 SNGGKVQCMKVWPTLGMKKFE 72
>RBS_ZANAE (O48550) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 178 Score = 37.7 bits (86), Expect = 0.009 Identities = 16/21 (76%), Positives = 17/21 (80%) Frame = -3 Query: 63 SNGGXIRCMQVWPIEGIKKFE 1 SNG +RCMQVWP EG KKFE Sbjct: 49 SNGLRVRCMQVWPPEGKKKFE 69
>RBS2_AMAHP (Q9XGX5) Ribulose bisphosphate carboxylase small chain 2,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 2) Length = 184 Score = 37.4 bits (85), Expect = 0.012 Identities = 15/21 (71%), Positives = 17/21 (80%) Frame = -3 Query: 63 SNGGXIRCMQVWPIEGIKKFE 1 SNGG ++CMQVWP G KKFE Sbjct: 53 SNGGRVQCMQVWPPVGKKKFE 73
>RBS4_SOYBN (P12468) Ribulose bisphosphate carboxylase small chain 4,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 4) Length = 178 Score = 37.4 bits (85), Expect = 0.012 Identities = 15/21 (71%), Positives = 17/21 (80%) Frame = -3 Query: 63 SNGGXIRCMQVWPIEGIKKFE 1 SNGG ++CMQVWP G KKFE Sbjct: 48 SNGGRVQCMQVWPPVGKKKFE 68
>RBS1_AMAHP (Q42516) Ribulose bisphosphate carboxylase small chain 1,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 1) Length = 183 Score = 37.4 bits (85), Expect = 0.012 Identities = 15/21 (71%), Positives = 17/21 (80%) Frame = -3 Query: 63 SNGGXIRCMQVWPIEGIKKFE 1 SNGG ++CMQVWP G KKFE Sbjct: 52 SNGGRVQCMQVWPPVGKKKFE 72
>RBS3_PEA (P07689) Ribulose bisphosphate carboxylase small chain 3A,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 3A) Length = 180 Score = 37.4 bits (85), Expect = 0.012 Identities = 15/21 (71%), Positives = 17/21 (80%) Frame = -3 Query: 63 SNGGXIRCMQVWPIEGIKKFE 1 SNGG ++CMQVWP G KKFE Sbjct: 50 SNGGRVKCMQVWPPIGKKKFE 70
>RBS3_AMAHP (Q9XGX4) Ribulose bisphosphate carboxylase small chain 3,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 3) Length = 180 Score = 37.4 bits (85), Expect = 0.012 Identities = 15/21 (71%), Positives = 17/21 (80%) Frame = -3 Query: 63 SNGGXIRCMQVWPIEGIKKFE 1 SNGG ++CMQVWP G KKFE Sbjct: 50 SNGGRVQCMQVWPPVGKKKFE 70
>RBS2_PEA (P00869) Ribulose bisphosphate carboxylase small chain 3C,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 3C) (PSS15) Length = 180 Score = 37.4 bits (85), Expect = 0.012 Identities = 15/21 (71%), Positives = 17/21 (80%) Frame = -3 Query: 63 SNGGXIRCMQVWPIEGIKKFE 1 SNGG ++CMQVWP G KKFE Sbjct: 50 SNGGRVKCMQVWPPIGKKKFE 70
>RBS_MEDSA (O65194) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 180 Score = 37.0 bits (84), Expect = 0.016 Identities = 15/21 (71%), Positives = 16/21 (76%) Frame = -3 Query: 63 SNGGXIRCMQVWPIEGIKKFE 1 SNGG + CMQVWP G KKFE Sbjct: 50 SNGGRVNCMQVWPPVGKKKFE 70
>RBS2_MESCR (Q04450) Ribulose bisphosphate carboxylase small chain 2,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 2) Length = 180 Score = 37.0 bits (84), Expect = 0.016 Identities = 15/21 (71%), Positives = 17/21 (80%) Frame = -3 Query: 63 SNGGXIRCMQVWPIEGIKKFE 1 SNGG ++CMQVWP G KKFE Sbjct: 48 SNGGRVQCMQVWPPLGKKKFE 68
>RBS6_MESCR (Q08186) Ribulose bisphosphate carboxylase small chain 6,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 6) Length = 186 Score = 37.0 bits (84), Expect = 0.016 Identities = 15/21 (71%), Positives = 17/21 (80%) Frame = -3 Query: 63 SNGGXIRCMQVWPIEGIKKFE 1 SNGG ++CMQVWP G KKFE Sbjct: 54 SNGGKVQCMQVWPPLGKKKFE 74
>RBS_GOSHI (P31333) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 182 Score = 37.0 bits (84), Expect = 0.016 Identities = 15/21 (71%), Positives = 17/21 (80%) Frame = -3 Query: 63 SNGGXIRCMQVWPIEGIKKFE 1 SNGG ++CMQVWP G KKFE Sbjct: 52 SNGGRVQCMQVWPPLGKKKFE 72
>RBS1_SOYBN (P00865) Ribulose bisphosphate carboxylase small chain 1,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 1) Length = 178 Score = 37.0 bits (84), Expect = 0.016 Identities = 15/21 (71%), Positives = 17/21 (80%) Frame = -3 Query: 63 SNGGXIRCMQVWPIEGIKKFE 1 SNGG ++CMQVWP G KKFE Sbjct: 48 SNGGRVQCMQVWPPIGKKKFE 68
>RBS3_MESCR (Q08183) Ribulose bisphosphate carboxylase small chain 3,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 3) Length = 183 Score = 37.0 bits (84), Expect = 0.016 Identities = 15/21 (71%), Positives = 17/21 (80%) Frame = -3 Query: 63 SNGGXIRCMQVWPIEGIKKFE 1 SNGG ++CMQVWP G KKFE Sbjct: 51 SNGGRVQCMQVWPPLGKKKFE 71
>RBS3_SOLTU (P32764) Ribulose bisphosphate carboxylase small chain 3,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 3) Length = 181 Score = 36.6 bits (83), Expect = 0.021 Identities = 14/21 (66%), Positives = 17/21 (80%) Frame = -3 Query: 63 SNGGXIRCMQVWPIEGIKKFE 1 SNGG +RCMQVWP +KK+E Sbjct: 51 SNGGRVRCMQVWPPINMKKYE 71
>RBS1_SOLTU (P26574) Ribulose bisphosphate carboxylase small chain 1,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 1) Length = 181 Score = 36.6 bits (83), Expect = 0.021 Identities = 14/21 (66%), Positives = 17/21 (80%) Frame = -3 Query: 63 SNGGXIRCMQVWPIEGIKKFE 1 SNGG +RCMQVWP +KK+E Sbjct: 51 SNGGRVRCMQVWPPINMKKYE 71
>RBS1_LYCES (P08706) Ribulose bisphosphate carboxylase small chain 1,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 1) (LESS17) Length = 181 Score = 36.6 bits (83), Expect = 0.021 Identities = 14/21 (66%), Positives = 17/21 (80%) Frame = -3 Query: 63 SNGGXIRCMQVWPIEGIKKFE 1 SNGG +RCMQVWP +KK+E Sbjct: 51 SNGGRVRCMQVWPPINMKKYE 71
>RBS1_BRANA (P05346) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 181 Score = 36.6 bits (83), Expect = 0.021 Identities = 15/22 (68%), Positives = 17/22 (77%) Frame = -3 Query: 66 VSNGGXIRCMQVWPIEGIKKFE 1 VSNGG + CM+VWP G KKFE Sbjct: 47 VSNGGRVSCMKVWPPVGKKKFE 68
>RBS0_SOLTU (P10647) Ribulose bisphosphate carboxylase small chain C,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit C) Length = 181 Score = 36.6 bits (83), Expect = 0.021 Identities = 14/21 (66%), Positives = 17/21 (80%) Frame = -3 Query: 63 SNGGXIRCMQVWPIEGIKKFE 1 SNGG +RCMQVWP +KK+E Sbjct: 51 SNGGRVRCMQVWPPINMKKYE 71
>RBS_STELP (Q41351) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 180 Score = 36.6 bits (83), Expect = 0.021 Identities = 14/21 (66%), Positives = 17/21 (80%) Frame = -3 Query: 63 SNGGXIRCMQVWPIEGIKKFE 1 SNGG +RCMQVWP +KK+E Sbjct: 50 SNGGRVRCMQVWPPINMKKYE 70
>RBSC_SOLTU (P26577) Ribulose bisphosphate carboxylase small chain 2C,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 2C) Length = 180 Score = 36.6 bits (83), Expect = 0.021 Identities = 14/21 (66%), Positives = 17/21 (80%) Frame = -3 Query: 63 SNGGXIRCMQVWPIEGIKKFE 1 SNGG +RCMQVWP +KK+E Sbjct: 50 SNGGRVRCMQVWPPINMKKYE 70
>RBSB_SOLTU (P26576) Ribulose bisphosphate carboxylase small chain 2B,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 2B) Length = 180 Score = 36.6 bits (83), Expect = 0.021 Identities = 14/21 (66%), Positives = 17/21 (80%) Frame = -3 Query: 63 SNGGXIRCMQVWPIEGIKKFE 1 SNGG +RCMQVWP +KK+E Sbjct: 50 SNGGRVRCMQVWPPINMKKYE 70
>RBSA_SOLTU (P26575) Ribulose bisphosphate carboxylase small chain 2A,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 2A) Length = 180 Score = 36.6 bits (83), Expect = 0.021 Identities = 14/21 (66%), Positives = 17/21 (80%) Frame = -3 Query: 63 SNGGXIRCMQVWPIEGIKKFE 1 SNGG +RCMQVWP +KK+E Sbjct: 50 SNGGRVRCMQVWPPINMKKYE 70
>RBS1A_ARATH (P10795) Ribulose bisphosphate carboxylase small chain 1A,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 1A) Length = 180 Score = 36.6 bits (83), Expect = 0.021 Identities = 15/21 (71%), Positives = 16/21 (76%) Frame = -3 Query: 63 SNGGXIRCMQVWPIEGIKKFE 1 SNGG + CMQVWP G KKFE Sbjct: 48 SNGGRVNCMQVWPPIGKKKFE 68
>RBS2_PETHY (P04715) Ribulose bisphosphate carboxylase small chain SSU11A,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit SSU11A) Length = 180 Score = 36.2 bits (82), Expect = 0.027 Identities = 14/21 (66%), Positives = 17/21 (80%) Frame = -3 Query: 63 SNGGXIRCMQVWPIEGIKKFE 1 SNGG ++CMQVWP G KK+E Sbjct: 50 SNGGRVQCMQVWPPYGKKKYE 70
>RBS1_PETHY (P04714) Ribulose bisphosphate carboxylase small chain SSU8,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit SSU8) Length = 180 Score = 36.2 bits (82), Expect = 0.027 Identities = 14/21 (66%), Positives = 17/21 (80%) Frame = -3 Query: 63 SNGGXIRCMQVWPIEGIKKFE 1 SNGG ++CMQVWP G KK+E Sbjct: 50 SNGGRVQCMQVWPPYGKKKYE 70
>RBS_HELAN (P08705) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 178 Score = 36.2 bits (82), Expect = 0.027 Identities = 13/21 (61%), Positives = 18/21 (85%) Frame = -3 Query: 63 SNGGXIRCMQVWPIEGIKKFE 1 SNGG ++CM+VWP G+KK+E Sbjct: 48 SNGGRVQCMKVWPPLGLKKYE 68
>RBS_PINTH (P10053) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 171 Score = 36.2 bits (82), Expect = 0.027 Identities = 15/21 (71%), Positives = 16/21 (76%) Frame = -3 Query: 63 SNGGXIRCMQVWPIEGIKKFE 1 SNGG +RCMQVWP G KFE Sbjct: 44 SNGGRVRCMQVWPPFGNPKFE 64
>RBS_SILPR (P18960) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 177 Score = 36.2 bits (82), Expect = 0.027 Identities = 13/21 (61%), Positives = 16/21 (76%) Frame = -3 Query: 63 SNGGXIRCMQVWPIEGIKKFE 1 +NGG + CMQVWP +KKFE Sbjct: 49 TNGGRVNCMQVWPPRNLKKFE 69
>RBS_LACSA (Q40250) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 181 Score = 36.2 bits (82), Expect = 0.027 Identities = 13/21 (61%), Positives = 18/21 (85%) Frame = -3 Query: 63 SNGGXIRCMQVWPIEGIKKFE 1 SNGG ++CM+VWP G+KK+E Sbjct: 50 SNGGRVQCMKVWPPIGLKKYE 70
>RBS_FAGCR (O22077) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 182 Score = 35.8 bits (81), Expect = 0.036 Identities = 13/21 (61%), Positives = 18/21 (85%) Frame = -3 Query: 63 SNGGXIRCMQVWPIEGIKKFE 1 SNGG ++CM+VWP G++KFE Sbjct: 52 SNGGRVQCMKVWPPLGLQKFE 72
>RBS1_MESCR (P16032) Ribulose bisphosphate carboxylase small chain 1,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 1) Length = 182 Score = 35.8 bits (81), Expect = 0.036 Identities = 14/21 (66%), Positives = 17/21 (80%) Frame = -3 Query: 63 SNGGXIRCMQVWPIEGIKKFE 1 +NGG ++CMQVWP G KKFE Sbjct: 50 TNGGRVQCMQVWPPLGKKKFE 70
>RBS2_BRANA (P27985) Ribulose bisphosphate carboxylase small chain F1,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit F1) Length = 181 Score = 35.0 bits (79), Expect = 0.061 Identities = 14/21 (66%), Positives = 16/21 (76%) Frame = -3 Query: 63 SNGGXIRCMQVWPIEGIKKFE 1 SNGG + CM+VWP G KKFE Sbjct: 48 SNGGRVSCMKVWPPVGKKKFE 68
>RBS2_SPIOL (Q43832) Ribulose bisphosphate carboxylase small chain 2,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 2) Length = 180 Score = 35.0 bits (79), Expect = 0.061 Identities = 11/21 (52%), Positives = 18/21 (85%) Frame = -3 Query: 63 SNGGXIRCMQVWPIEGIKKFE 1 SNGG ++CM+VWP + +K++E Sbjct: 50 SNGGRVQCMKVWPTQNMKRYE 70
>RBS_FLATR (P07089) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 173 Score = 34.7 bits (78), Expect = 0.079 Identities = 13/21 (61%), Positives = 17/21 (80%) Frame = -3 Query: 63 SNGGXIRCMQVWPIEGIKKFE 1 SNGG ++CM+VWP G KK+E Sbjct: 43 SNGGRVQCMKVWPPVGKKKYE 63
>RBS_RAPSA (P08135) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 181 Score = 34.7 bits (78), Expect = 0.079 Identities = 14/21 (66%), Positives = 16/21 (76%) Frame = -3 Query: 63 SNGGXIRCMQVWPIEGIKKFE 1 SNGG + CM+VWP G KKFE Sbjct: 48 SNGGRVSCMKVWPPIGKKKFE 68
>RBS3B_ARATH (P10798) Ribulose bisphosphate carboxylase small chain 3B,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 3B) Length = 181 Score = 34.7 bits (78), Expect = 0.079 Identities = 14/21 (66%), Positives = 16/21 (76%) Frame = -3 Query: 63 SNGGXIRCMQVWPIEGIKKFE 1 SNGG + CM+VWP G KKFE Sbjct: 48 SNGGRVSCMKVWPPIGKKKFE 68
>RBS2B_ARATH (P10797) Ribulose bisphosphate carboxylase small chain 2B,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 2B) Length = 181 Score = 34.7 bits (78), Expect = 0.079 Identities = 14/21 (66%), Positives = 16/21 (76%) Frame = -3 Query: 63 SNGGXIRCMQVWPIEGIKKFE 1 SNGG + CM+VWP G KKFE Sbjct: 48 SNGGRVSCMKVWPPIGKKKFE 68
>RBS1B_ARATH (P10796) Ribulose bisphosphate carboxylase small chain 1B,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 1B) Length = 181 Score = 34.7 bits (78), Expect = 0.079 Identities = 14/21 (66%), Positives = 16/21 (76%) Frame = -3 Query: 63 SNGGXIRCMQVWPIEGIKKFE 1 SNGG + CM+VWP G KKFE Sbjct: 48 SNGGRVSCMKVWPPIGKKKFE 68
>RBS_TRIRP (P17673) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 178 Score = 34.7 bits (78), Expect = 0.079 Identities = 14/21 (66%), Positives = 15/21 (71%) Frame = -3 Query: 63 SNGGXIRCMQVWPIEGIKKFE 1 SNG + CMQVWP G KKFE Sbjct: 48 SNGSRVNCMQVWPPVGKKKFE 68
>RBS1_FLAPR (Q39743) Ribulose bisphosphate carboxylase small chain 1,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 1) Length = 173 Score = 34.3 bits (77), Expect = 0.10 Identities = 13/21 (61%), Positives = 17/21 (80%) Frame = -3 Query: 63 SNGGXIRCMQVWPIEGIKKFE 1 SNGG ++CM+VWP G KK+E Sbjct: 43 SNGGRVQCMKVWPPLGKKKYE 63
>RBS1_PEA (P00868) Ribulose bisphosphate carboxylase small chain,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit) (PSSU1) (Fragment) Length = 136 Score = 34.3 bits (77), Expect = 0.10 Identities = 14/21 (66%), Positives = 16/21 (76%) Frame = -3 Query: 63 SNGGXIRCMQVWPIEGIKKFE 1 SNG ++CMQVWP G KKFE Sbjct: 6 SNGERVKCMQVWPPIGKKKFE 26
>RBS4_FLAPR (Q39746) Ribulose bisphosphate carboxylase small chain 4,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 4) Length = 178 Score = 34.3 bits (77), Expect = 0.10 Identities = 13/21 (61%), Positives = 17/21 (80%) Frame = -3 Query: 63 SNGGXIRCMQVWPIEGIKKFE 1 SNGG ++CM+VWP G KK+E Sbjct: 48 SNGGRVQCMKVWPPLGKKKYE 68
>RBS3B_LYCES (P05349) Ribulose bisphosphate carboxylase small chain 3B,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 3B) Length = 180 Score = 34.3 bits (77), Expect = 0.10 Identities = 13/21 (61%), Positives = 16/21 (76%) Frame = -3 Query: 63 SNGGXIRCMQVWPIEGIKKFE 1 SNGG + CMQVWP +KK+E Sbjct: 50 SNGGRVSCMQVWPPINMKKYE 70
>RBS3A_LYCES (P07180) Ribulose bisphosphate carboxylase small chain 3A/3C,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 3A/3C) Length = 180 Score = 34.3 bits (77), Expect = 0.10 Identities = 13/21 (61%), Positives = 16/21 (76%) Frame = -3 Query: 63 SNGGXIRCMQVWPIEGIKKFE 1 SNGG + CMQVWP +KK+E Sbjct: 50 SNGGRVSCMQVWPPINMKKYE 70
>RBS2A_LYCES (P07179) Ribulose bisphosphate carboxylase small chain 2A,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 2A) (LESS 5) Length = 180 Score = 34.3 bits (77), Expect = 0.10 Identities = 13/21 (61%), Positives = 16/21 (76%) Frame = -3 Query: 63 SNGGXIRCMQVWPIEGIKKFE 1 SNGG + CMQVWP +KK+E Sbjct: 50 SNGGRVSCMQVWPPINMKKYE 70
>RBS_LARLA (P16031) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 189 Score = 34.3 bits (77), Expect = 0.10 Identities = 14/21 (66%), Positives = 15/21 (71%) Frame = -3 Query: 63 SNGGXIRCMQVWPIEGIKKFE 1 SNG +RCMQVWP KKFE Sbjct: 60 SNGSRVRCMQVWPPYANKKFE 80
>RBS_CUCSA (P08474) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 189 Score = 33.9 bits (76), Expect = 0.14 Identities = 12/21 (57%), Positives = 17/21 (80%) Frame = -3 Query: 63 SNGGXIRCMQVWPIEGIKKFE 1 SN G ++CM+VWP G++KFE Sbjct: 52 SNAGKVQCMKVWPPLGLRKFE 72
>RBS_HEVBR (P29684) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 183 Score = 33.9 bits (76), Expect = 0.14 Identities = 13/21 (61%), Positives = 16/21 (76%) Frame = -3 Query: 63 SNGGXIRCMQVWPIEGIKKFE 1 SNGG ++CMQVWP G K +E Sbjct: 52 SNGGRVQCMQVWPPRGKKFYE 72
>RBS2_NICSY (P22433) Ribulose bisphosphate carboxylase small chain S41,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit S41) Length = 181 Score = 33.5 bits (75), Expect = 0.18 Identities = 13/21 (61%), Positives = 16/21 (76%) Frame = -3 Query: 63 SNGGXIRCMQVWPIEGIKKFE 1 SNGG ++CMQVWP KK+E Sbjct: 51 SNGGRVQCMQVWPPINKKKYE 71
>RBS_TOBAC (P69249) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) (TSSU3-8) Length = 180 Score = 33.5 bits (75), Expect = 0.18 Identities = 13/21 (61%), Positives = 16/21 (76%) Frame = -3 Query: 63 SNGGXIRCMQVWPIEGIKKFE 1 SNGG ++CMQVWP KK+E Sbjct: 50 SNGGRVQCMQVWPPINKKKYE 70
>RBS8_NICPL (P26573) Ribulose bisphosphate carboxylase small chain 8B,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 8B) Length = 180 Score = 33.5 bits (75), Expect = 0.18 Identities = 13/21 (61%), Positives = 16/21 (76%) Frame = -3 Query: 63 SNGGXIRCMQVWPIEGIKKFE 1 SNGG ++CMQVWP KK+E Sbjct: 50 SNGGRVQCMQVWPPINKKKYE 70
>RBS1_NICSY (P69250) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 180 Score = 33.5 bits (75), Expect = 0.18 Identities = 13/21 (61%), Positives = 16/21 (76%) Frame = -3 Query: 63 SNGGXIRCMQVWPIEGIKKFE 1 SNGG ++CMQVWP KK+E Sbjct: 50 SNGGRVQCMQVWPPINKKKYE 70
>RBS7_FLAPR (Q39749) Ribulose bisphosphate carboxylase small chain 7,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 7) Length = 173 Score = 33.1 bits (74), Expect = 0.23 Identities = 12/21 (57%), Positives = 17/21 (80%) Frame = -3 Query: 63 SNGGXIRCMQVWPIEGIKKFE 1 SNGG ++CM+VWP G K++E Sbjct: 43 SNGGRVQCMKVWPPLGKKRYE 63
>RBS5_FLAPR (Q39747) Ribulose bisphosphate carboxylase small chain 5,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 5) Length = 173 Score = 33.1 bits (74), Expect = 0.23 Identities = 12/21 (57%), Positives = 17/21 (80%) Frame = -3 Query: 63 SNGGXIRCMQVWPIEGIKKFE 1 SNGG ++CM+VWP G K++E Sbjct: 43 SNGGRVQCMKVWPPLGKKRYE 63
>RBS3_FLAPR (Q39745) Ribulose bisphosphate carboxylase small chain 3,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 3) Length = 173 Score = 33.1 bits (74), Expect = 0.23 Identities = 12/21 (57%), Positives = 17/21 (80%) Frame = -3 Query: 63 SNGGXIRCMQVWPIEGIKKFE 1 SNGG ++CM+VWP G K++E Sbjct: 43 SNGGRVQCMKVWPPLGKKRYE 63
>RBS2_FLAPR (Q39744) Ribulose bisphosphate carboxylase small chain 2,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 2) Length = 178 Score = 33.1 bits (74), Expect = 0.23 Identities = 12/21 (57%), Positives = 17/21 (80%) Frame = -3 Query: 63 SNGGXIRCMQVWPIEGIKKFE 1 SNGG ++CM+VWP G K++E Sbjct: 48 SNGGRVQCMKVWPPLGKKRYE 68
>RBS6_FLAPR (Q39748) Ribulose bisphosphate carboxylase small chain 6,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 6) Length = 173 Score = 32.3 bits (72), Expect = 0.39 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = -3 Query: 63 SNGGXIRCMQVWPIEGIKKF 4 SNGG ++CM+VWP G KK+ Sbjct: 43 SNGGRVQCMKVWPPLGKKKY 62
>RBS5_MESCR (Q08185) Ribulose bisphosphate carboxylase small chain 5,| chloroplast precursor (EC 4.1.1.39) (RuBisCO small subunit 5) Length = 182 Score = 32.0 bits (71), Expect = 0.52 Identities = 14/21 (66%), Positives = 17/21 (80%) Frame = -3 Query: 63 SNGGXIRCMQVWPIEGIKKFE 1 SNGG ++CM VWP G+KKFE Sbjct: 51 SNGGRVQCM-VWPPLGMKKFE 70
>RBS_CAPAN (O65349) Ribulose bisphosphate carboxylase small chain, chloroplast| precursor (EC 4.1.1.39) (RuBisCO small subunit) Length = 187 Score = 30.4 bits (67), Expect = 1.5 Identities = 12/21 (57%), Positives = 14/21 (66%) Frame = -3 Query: 63 SNGGXIRCMQVWPIEGIKKFE 1 SNGG + CM VWP KK+E Sbjct: 50 SNGGRVECMLVWPPINKKKYE 70 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.314 0.138 0.408 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 10,305,527 Number of Sequences: 219361 Number of extensions: 54566 Number of successful extensions: 215 Number of sequences better than 10.0: 86 Number of HSP's better than 10.0 without gapping: 214 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 215 length of database: 80,573,946 effective HSP length: 0 effective length of database: 80,573,946 effective search space used: 1933774704 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits)
