ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal3m21 |
|---|---|
| Clone Library Name | barley_pub |
>gb|U43493.1|HVU43493 Hordeum vulgare ribulose-1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 816 Score = 129 bits (65), Expect = 9e-28 Identities = 67/68 (98%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctgcatgcacctgatncttccaccgtt 60 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 200 ctcgaacttcttgatgccctcgatgggccacacctgcatgcacctgatccttccaccgtt 141 Query: 61 gctgacgc 68 |||||||| Sbjct: 140 gctgacgc 133
>emb|X00235.1|TARUB2 Wheat mRNA fragment for small subunit precursor of RuBPCase (EC 4.1.1.39 ribulosebisphosphate carboxylase) clones 234 and 406 Length = 743 Score = 129 bits (65), Expect = 9e-28 Identities = 67/68 (98%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctgcatgcacctgatncttccaccgtt 60 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 145 ctcgaacttcttgatgccctcgatgggccacacctgcatgcacctgatccttccaccgtt 86 Query: 61 gctgacgc 68 |||||||| Sbjct: 85 gctgacgc 78
>emb|AJ131738.1|SCE131738 Secale cereale mRNA for hypothetical protein, clone 9 Length = 875 Score = 129 bits (65), Expect = 9e-28 Identities = 67/68 (98%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctgcatgcacctgatncttccaccgtt 60 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 266 ctcgaacttcttgatgccctcgatgggccacacctgcatgcacctgatccttccaccgtt 207 Query: 61 gctgacgc 68 |||||||| Sbjct: 206 gctgacgc 199
>emb|X83095.1|ASRBCSSS A.squarrosa mRNA for ribulose-1,5-bisphosphate carboxylase/oxygenase, small subunit Length = 837 Score = 121 bits (61), Expect = 2e-25 Identities = 66/68 (97%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctgcatgcacctgatncttccaccgtt 60 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 226 ctcgaacttcttgataccctcgatgggccacacctgcatgcacctgatccttccaccgtt 167 Query: 61 gctgacgc 68 |||||||| Sbjct: 166 gctgacgc 159
>gb|AF192777.1|AF192777 Avena clauda clone Cl9 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 111 bits (56), Expect = 2e-22 Identities = 64/67 (95%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctgcatgcacctgatncttccaccgtt 60 ||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||| Sbjct: 165 ctcgaacttcttgatgccctcaatcggccacacctgcatgcacctgatccttccaccgtt 106 Query: 61 gctgacg 67 ||||||| Sbjct: 105 gctgacg 99
>gb|AF192780.1|AF192780 Avena maroccana clone Ma7 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 105 bits (53), Expect = 1e-20 Identities = 64/68 (94%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctgcatgcacctgatncttccaccgtt 60 ||||||||||||||||||||| || ||||||||||||||||||||||| ||||| ||||| Sbjct: 165 ctcgaacttcttgatgccctcaattggccacacctgcatgcacctgatccttccgccgtt 106 Query: 61 gctgacgc 68 |||||||| Sbjct: 105 gctgacgc 98
>gb|AF192775.1|AF192775 Avena strigosa clone Str5 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 105 bits (53), Expect = 1e-20 Identities = 64/68 (94%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctgcatgcacctgatncttccaccgtt 60 ||||||||||||||||||||| || ||||||||||||||||||||||| ||||| ||||| Sbjct: 165 ctcgaacttcttgatgccctcaatcggccacacctgcatgcacctgatccttccgccgtt 106 Query: 61 gctgacgc 68 |||||||| Sbjct: 105 gctgacgc 98
>gb|AF192774.1|AF192774 Avena strigosa clone Str3 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 105 bits (53), Expect = 1e-20 Identities = 64/68 (94%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctgcatgcacctgatncttccaccgtt 60 ||||||||||||||||||||| || ||||||||||||||||||||||| ||||| ||||| Sbjct: 165 ctcgaacttcttgatgccctcaatcggccacacctgcatgcacctgatccttccgccgtt 106 Query: 61 gctgacgc 68 |||||||| Sbjct: 105 gctgacgc 98
>gb|AF097361.1|AF097361 Avena clauda ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 105 bits (53), Expect = 1e-20 Identities = 64/68 (94%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctgcatgcacctgatncttccaccgtt 60 ||||||||||||||||||||| || ||||||||||||||||| ||||| ||||||||||| Sbjct: 165 ctcgaacttcttgatgccctcaatcggccacacctgcatgcatctgattcttccaccgtt 106 Query: 61 gctgacgc 68 |||||||| Sbjct: 105 gctgacgc 98
>gb|AF097360.1|AF097360 Avena strigosa ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 105 bits (53), Expect = 1e-20 Identities = 64/68 (94%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctgcatgcacctgatncttccaccgtt 60 ||||||||||||||||||||| || ||||||||||||||||||||||| ||||| ||||| Sbjct: 165 ctcgaacttcttgatgccctcaatcggccacacctgcatgcacctgatccttccgccgtt 106 Query: 61 gctgacgc 68 |||||||| Sbjct: 105 gctgacgc 98
>emb|AJ635206.1| Triticum durum ssp. durum partial mRNA for putative rubisco small subunit (rbcS gene) Length = 518 Score = 105 bits (53), Expect = 1e-20 Identities = 64/68 (94%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctgcatgcacctgatncttccaccgtt 60 ||||||||||||||||||||| || ||||||||||||||||||||||| ||||| ||||| Sbjct: 170 ctcgaacttcttgatgccctcaatcggccacacctgcatgcacctgatccttccgccgtt 111 Query: 61 gctgacgc 68 |||||||| Sbjct: 110 gctgacgc 103
>gb|AF104250.1|AF104250 Avena maroccana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 105 bits (53), Expect = 1e-20 Identities = 64/68 (94%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctgcatgcacctgatncttccaccgtt 60 ||||||||||||||||||||| || ||||||||||||||||||||||| ||||| ||||| Sbjct: 165 ctcgaacttcttgatgccctcaattggccacacctgcatgcacctgatccttccgccgtt 106 Query: 61 gctgacgc 68 |||||||| Sbjct: 105 gctgacgc 98
>emb|AJ131737.1|SCE131737 Secale cereale mRNA for hypothetical protein, clone 5 Length = 845 Score = 97.6 bits (49), Expect = 3e-18 Identities = 63/68 (92%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctgcatgcacctgatncttccaccgtt 60 ||||||||||||||||||||| || ||||||||||||||||| ||||| ||||| ||||| Sbjct: 247 ctcgaacttcttgatgccctcaattggccacacctgcatgcatctgatccttccgccgtt 188 Query: 61 gctgacgc 68 |||||||| Sbjct: 187 gctgacgc 180
>gb|AF192779.1|AF192779 Avena maroccana clone Ma4 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 97.6 bits (49), Expect = 3e-18 Identities = 63/68 (92%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctgcatgcacctgatncttccaccgtt 60 ||||||||||||||||||||| || ||||||||||||||||| | ||| ||||||||||| Sbjct: 165 ctcgaacttcttgatgccctcaatcggccacacctgcatgcatcggattcttccaccgtt 106 Query: 61 gctgacgc 68 |||||||| Sbjct: 105 gctgacgc 98
>gb|AF192776.1|AF192776 Avena clauda clone Cl5 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 97.6 bits (49), Expect = 3e-18 Identities = 63/68 (92%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctgcatgcacctgatncttccaccgtt 60 ||||||||||||||||||||| || ||||||||||||||||| | ||| ||||||||||| Sbjct: 165 ctcgaacttcttgatgccctcaatcggccacacctgcatgcatcggattcttccaccgtt 106 Query: 61 gctgacgc 68 |||||||| Sbjct: 105 gctgacgc 98
>gb|AF192773.1|AF192773 Avena agadiriana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 97.6 bits (49), Expect = 3e-18 Identities = 63/68 (92%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctgcatgcacctgatncttccaccgtt 60 ||||||||||||||||||||| || ||||||||||||||||| | ||| ||||||||||| Sbjct: 165 ctcgaacttcttgatgccctcaatcggccacacctgcatgcatcggattcttccaccgtt 106 Query: 61 gctgacgc 68 |||||||| Sbjct: 105 gctgacgc 98
>gb|AF097359.1|AF097359 Avena agadiriana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 97.6 bits (49), Expect = 3e-18 Identities = 63/68 (92%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctgcatgcacctgatncttccaccgtt 60 ||||||||||||||||||||| || ||||||||||||||||| | ||| ||||||||||| Sbjct: 165 ctcgaacttcttgatgccctcaatcggccacacctgcatgcatcggattcttccaccgtt 106 Query: 61 gctgacgc 68 |||||||| Sbjct: 105 gctgacgc 98
>gb|AF104249.1|AF104249 Avena vaviloviana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 97.6 bits (49), Expect = 3e-18 Identities = 63/68 (92%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctgcatgcacctgatncttccaccgtt 60 ||||||||||||||||||||| || ||||||||||||||||| | ||| ||||||||||| Sbjct: 165 ctcgaacttcttgatgccctcaataggccacacctgcatgcatcggattcttccaccgtt 106 Query: 61 gctgacgc 68 |||||||| Sbjct: 105 gctgacgc 98
>gb|AF096617.1|AF096617 Avena sterilis subsp. ludoviciana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, partial cds Length = 504 Score = 97.6 bits (49), Expect = 3e-18 Identities = 63/68 (92%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctgcatgcacctgatncttccaccgtt 60 ||||||||||||||||||||| || ||||||||||||||||| | ||| ||||||||||| Sbjct: 165 ctcgaacttcttgatgccctcaataggccacacctgcatgcatcggattcttccaccgtt 106 Query: 61 gctgacgc 68 |||||||| Sbjct: 105 gctgacgc 98
>gb|AF192778.1|AF192778 Avena sterilis subsp. ludoviciana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 89.7 bits (45), Expect = 8e-16 Identities = 62/68 (91%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctgcatgcacctgatncttccaccgtt 60 |||||| |||||||||||||| || ||||||||||||||||| | ||| ||||||||||| Sbjct: 165 ctcgaatttcttgatgccctcaataggccacacctgcatgcatcggattcttccaccgtt 106 Query: 61 gctgacgc 68 |||||||| Sbjct: 105 gctgacgc 98
>gb|M37477.1|WHTRUBIAB T.aestivum ribulose-1,5-bisphosphate carboxylase/oxygenase (RUBISCO) gene, complete cds Length = 779 Score = 89.7 bits (45), Expect = 8e-16 Identities = 62/68 (91%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctgcatgcacctgatncttccaccgtt 60 ||||||||||||||||||||| || ||||||||||||||||| ||||| ||||| || || Sbjct: 237 ctcgaacttcttgatgccctcaattggccacacctgcatgcatctgatccttccgccatt 178 Query: 61 gctgacgc 68 |||||||| Sbjct: 177 gctgacgc 170
>gb|AY445627.1| Oryza sativa (japonica cultivar-group) ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit mRNA, complete cds; chloroplast Length = 860 Score = 87.7 bits (44), Expect = 3e-15 Identities = 61/67 (91%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctgcatgcacctgatncttccaccgtt 60 ||||||||||||||||||||| || |||||||||||||||||| |||| ||||| || || Sbjct: 231 ctcgaacttcttgatgccctcaattggccacacctgcatgcacttgatccttccgccatt 172 Query: 61 gctgacg 67 ||||||| Sbjct: 171 gctgacg 165
>dbj|AK121444.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023141B14, full insert sequence Length = 984 Score = 87.7 bits (44), Expect = 3e-15 Identities = 61/67 (91%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctgcatgcacctgatncttccaccgtt 60 ||||||||||||||||||||| || ||||||||||||||||||||||| || || || || Sbjct: 390 ctcgaacttcttgatgccctcaatcggccacacctgcatgcacctgatcctgccgccatt 331 Query: 61 gctgacg 67 ||||||| Sbjct: 330 gctgacg 324
>dbj|AK119219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-F11, full insert sequence Length = 828 Score = 87.7 bits (44), Expect = 3e-15 Identities = 61/67 (91%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctgcatgcacctgatncttccaccgtt 60 ||||||||||||||||||||| || ||||||||||||||||||||||| || || || || Sbjct: 236 ctcgaacttcttgatgccctcaatcggccacacctgcatgcacctgatcctgccgccatt 177 Query: 61 gctgacg 67 ||||||| Sbjct: 176 gctgacg 170
>dbj|AK070556.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062J10, full insert sequence Length = 2409 Score = 87.7 bits (44), Expect = 3e-15 Identities = 61/67 (91%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctgcatgcacctgatncttccaccgtt 60 ||||||||||||||||||||| || ||||||||||||||||||||||| || || || || Sbjct: 237 ctcgaacttcttgatgccctcaatcggccacacctgcatgcacctgatcctgccgccatt 178 Query: 61 gctgacg 67 ||||||| Sbjct: 177 gctgacg 171
>dbj|AK068555.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013156H12, full insert sequence Length = 899 Score = 87.7 bits (44), Expect = 3e-15 Identities = 61/67 (91%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctgcatgcacctgatncttccaccgtt 60 ||||||||||||||||||||| || |||||||||||||||||| |||| ||||| || || Sbjct: 248 ctcgaacttcttgatgccctcaattggccacacctgcatgcacttgatccttccgccatt 189 Query: 61 gctgacg 67 ||||||| Sbjct: 188 gctgacg 182
>dbj|AK061611.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-F07, full insert sequence Length = 830 Score = 87.7 bits (44), Expect = 3e-15 Identities = 61/67 (91%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctgcatgcacctgatncttccaccgtt 60 ||||||||||||||||||||| || ||||||||||||||||||||||| || || || || Sbjct: 239 ctcgaacttcttgatgccctcaatcggccacacctgcatgcacctgatcctgccgccatt 180 Query: 61 gctgacg 67 ||||||| Sbjct: 179 gctgacg 173
>gb|AF052305.1|AF052305 Oryza sativa ribulose 1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 835 Score = 87.7 bits (44), Expect = 3e-15 Identities = 61/67 (91%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctgcatgcacctgatncttccaccgtt 60 ||||||||||||||||||||| || ||||||||||||||||||||||| || || || || Sbjct: 225 ctcgaacttcttgatgccctcaatcggccacacctgcatgcacctgatcctgccgccatt 166 Query: 61 gctgacg 67 ||||||| Sbjct: 165 gctgacg 159
>gb|AF017364.1|AF017364 Oryza sativa ribulose 1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 854 Score = 87.7 bits (44), Expect = 3e-15 Identities = 61/67 (91%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctgcatgcacctgatncttccaccgtt 60 ||||||||||||||||||||| || ||||||||||||||||||||||| || || || || Sbjct: 262 ctcgaacttcttgatgccctcaatcggccacacctgcatgcacctgatcctgccgccatt 203 Query: 61 gctgacg 67 ||||||| Sbjct: 202 gctgacg 196
>gb|AF017363.1|AF017363 Oryza sativa ribulose 1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 918 Score = 87.7 bits (44), Expect = 3e-15 Identities = 61/67 (91%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctgcatgcacctgatncttccaccgtt 60 ||||||||||||||||||||| || |||||||||||||||||| |||| ||||| || || Sbjct: 232 ctcgaacttcttgatgccctcaattggccacacctgcatgcacttgatccttccgccatt 173 Query: 61 gctgacg 67 ||||||| Sbjct: 172 gctgacg 166
>gb|L22155.1|RICCPRBCLA Oryza sativum mitochondrial ribulose bisphosphate carboxylase/oxygenase (rbcS) mRNA, complete cds Length = 808 Score = 87.7 bits (44), Expect = 3e-15 Identities = 61/67 (91%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctgcatgcacctgatncttccaccgtt 60 ||||||||||||||||||||| || ||||||||||||||||||||||| || || || || Sbjct: 214 ctcgaacttcttgatgccctcaatcggccacacctgcatgcacctgatcctgccgccatt 155 Query: 61 gctgacg 67 ||||||| Sbjct: 154 gctgacg 148
>dbj|D00643.1|RICRUBPC1 Oryza sativa (japonica cultivar-group) mRNA for the small subunit of ribulose-1,5-bisphosphate carboxylase, complete cds, clone pOSSS1139 Length = 830 Score = 87.7 bits (44), Expect = 3e-15 Identities = 61/67 (91%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctgcatgcacctgatncttccaccgtt 60 ||||||||||||||||||||| || ||||||||||||||||||||||| || || || || Sbjct: 234 ctcgaacttcttgatgccctcaatcggccacacctgcatgcacctgatcctgccgccatt 175 Query: 61 gctgacg 67 ||||||| Sbjct: 174 gctgacg 168
>dbj|AK099574.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013036G21, full insert sequence Length = 947 Score = 81.8 bits (41), Expect = 2e-13 Identities = 58/64 (90%) Strand = Plus / Minus Query: 5 aacttcttgatgccctcgatgggccacacctgcatgcacctgatncttccaccgttgctg 64 |||||||||||||| || || |||||||||||||| || ||||| ||||||||||||||| Sbjct: 244 aacttcttgatgccttcaatcggccacacctgcatacagctgatccttccaccgttgctg 185 Query: 65 acgc 68 |||| Sbjct: 184 acgc 181
>dbj|AK070257.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023042N11, full insert sequence Length = 845 Score = 79.8 bits (40), Expect = 8e-13 Identities = 60/67 (89%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctgcatgcacctgatncttccaccgtt 60 |||||||||||| |||||||| || ||||||||||||||||| ||||| ||||| || || Sbjct: 244 ctcgaacttcttaatgccctcaatcggccacacctgcatgcatctgatccttccgccatt 185 Query: 61 gctgacg 67 ||||||| Sbjct: 184 gctgacg 178
>dbj|AK068266.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149A10, full insert sequence Length = 1999 Score = 79.8 bits (40), Expect = 8e-13 Identities = 60/67 (89%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctgcatgcacctgatncttccaccgtt 60 |||||||||||| |||||||| || ||||||||||||||||| ||||| ||||| || || Sbjct: 246 ctcgaacttcttaatgccctcaatcggccacacctgcatgcatctgatccttccgccatt 187 Query: 61 gctgacg 67 ||||||| Sbjct: 186 gctgacg 180
>dbj|D00644.1|RICRUBPC2 Oryza sativa (japonica cultivar-group) mRNA for the small subunit of ribulose-1,5-bisphosphate carboxylase, complete cds, clone pOSSS2106 Length = 895 Score = 79.8 bits (40), Expect = 8e-13 Identities = 60/67 (89%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctgcatgcacctgatncttccaccgtt 60 ||||||||||||||||||||| || ||||||||||||||| || |||| ||||| || || Sbjct: 246 ctcgaacttcttgatgccctcaattggccacacctgcatgaacttgatccttccgccatt 187 Query: 61 gctgacg 67 ||||||| Sbjct: 186 gctgacg 180
>dbj|AB042066.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:p9-1 Length = 739 Score = 75.8 bits (38), Expect = 1e-11 Identities = 38/38 (100%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctgca 38 |||||||||||||||||||||||||||||||||||||| Sbjct: 391 ctcgaacttcttgatgccctcgatgggccacacctgca 354 Score = 67.9 bits (34), Expect = 3e-09 Identities = 36/37 (97%) Strand = Plus / Minus Query: 32 acctgcatgcacctgatncttccaccgttgctgacgc 68 ||||||||||||||||| ||||||||||||||||||| Sbjct: 149 acctgcatgcacctgatccttccaccgttgctgacgc 113
>dbj|AB042064.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:p2-1 Length = 653 Score = 67.9 bits (34), Expect = 3e-09 Identities = 37/38 (97%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctgca 38 |||||||||||| ||||||||||||||||||||||||| Sbjct: 305 ctcgaacttcttaatgccctcgatgggccacacctgca 268 Score = 60.0 bits (30), Expect = 7e-07 Identities = 35/37 (94%) Strand = Plus / Minus Query: 32 acctgcatgcacctgatncttccaccgttgctgacgc 68 |||||||||| |||||| ||||||||||||||||||| Sbjct: 149 acctgcatgcgcctgatccttccaccgttgctgacgc 113
>emb|X06535.1|ZMRUBSSU Maize mRNA for ribulose-1,5-bisphosphate carboxylase small subunit (RuBPC; EC 4.1.1.39) Length = 830 Score = 63.9 bits (32), Expect = 5e-08 Identities = 58/67 (86%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctgcatgcacctgatncttccaccgtt 60 ||||||||||||| |||| | | ||||||||||||||||||| ||| ||||| ||||| Sbjct: 245 ctcgaacttcttgttgccgtaggccggccacacctgcatgcaccggatccttccgccgtt 186 Query: 61 gctgacg 67 ||||||| Sbjct: 185 gctgacg 179
>gb|AY103730.1| Zea mays PCO095823 mRNA sequence Length = 1172 Score = 63.9 bits (32), Expect = 5e-08 Identities = 58/67 (86%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctgcatgcacctgatncttccaccgtt 60 ||||||||||||| |||| | | ||||||||||||||||||| ||| ||||| ||||| Sbjct: 365 ctcgaacttcttgttgccgtaggccggccacacctgcatgcaccggatccttccgccgtt 306 Query: 61 gctgacg 67 ||||||| Sbjct: 305 gctgacg 299
>dbj|D00170.1|MZEPCSSU Zea mays mRNA for ribulose 1,5-bisphosphate carboxylase small subunit, complete cds Length = 830 Score = 63.9 bits (32), Expect = 5e-08 Identities = 58/67 (86%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctgcatgcacctgatncttccaccgtt 60 ||||||||||||| |||| | | ||||||||||||||||||| ||| ||||| ||||| Sbjct: 245 ctcgaacttcttgttgccgtaggccggccacacctgcatgcaccggatccttccgccgtt 186 Query: 61 gctgacg 67 ||||||| Sbjct: 185 gctgacg 179
>dbj|AB020939.1| Triticum timopheevii subsp. armeniacum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Ara-A Length = 604 Score = 63.9 bits (32), Expect = 5e-08 Identities = 38/40 (95%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctgcatg 40 ||||||||||||||||||||| || ||||||||||||||| Sbjct: 272 ctcgaacttcttgatgccctcaatcggccacacctgcatg 233 Score = 52.0 bits (26), Expect = 2e-04 Identities = 34/37 (91%) Strand = Plus / Minus Query: 32 acctgcatgcacctgatncttccaccgttgctgacgc 68 ||||||||||||||||| ||||| || |||||||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgacgc 99
>gb|AF202648.1|AF202648 Avena maroccana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 620 Score = 60.0 bits (30), Expect = 7e-07 Identities = 35/37 (94%) Strand = Plus / Minus Query: 32 acctgcatgcacctgatncttccaccgttgctgacgc 68 ||||||||||||||||| ||||| ||||||||||||| Sbjct: 134 acctgcatgcacctgatccttccgccgttgctgacgc 98 Score = 56.0 bits (28), Expect = 1e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctg 36 ||||||||||||||||||||| || ||||||||||| Sbjct: 281 ctcgaacttcttgatgccctcaattggccacacctg 246
>gb|AF202647.1|AF202647 Avena agadiriana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 593 Score = 60.0 bits (30), Expect = 7e-07 Identities = 35/37 (94%) Strand = Plus / Minus Query: 32 acctgcatgcacctgatncttccaccgttgctgacgc 68 ||||||||||| ||||| ||||||||||||||||||| Sbjct: 134 acctgcatgcatctgattcttccaccgttgctgacgc 98 Score = 48.1 bits (24), Expect = 0.003 Identities = 33/36 (91%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctg 36 ||||||||||||||||||||| || ||||| ||||| Sbjct: 254 ctcgaacttcttgatgccctcaatcggccatacctg 219
>gb|AF202646.1|AF202646 Avena clauda clone ClG4 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 586 Score = 60.0 bits (30), Expect = 7e-07 Identities = 35/37 (94%) Strand = Plus / Minus Query: 32 acctgcatgcacctgatncttccaccgttgctgacgc 68 ||||||||||| ||||| ||||||||||||||||||| Sbjct: 134 acctgcatgcatctgatccttccaccgttgctgacgc 98 Score = 54.0 bits (27), Expect = 4e-05 Identities = 33/35 (94%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacct 35 ||||||||||||||||||||| || |||||||||| Sbjct: 247 ctcgaacttcttgatgccctcaatcggccacacct 213
>gb|AF202645.1|AF202645 Avena clauda clone ClG2 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 600 Score = 60.0 bits (30), Expect = 7e-07 Identities = 35/37 (94%) Strand = Plus / Minus Query: 32 acctgcatgcacctgatncttccaccgttgctgacgc 68 ||||||||||| ||||| ||||||||||||||||||| Sbjct: 134 acctgcatgcatctgattcttccaccgttgctgacgc 98 Score = 48.1 bits (24), Expect = 0.003 Identities = 33/36 (91%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctg 36 ||||||||||||||||||||| | ||||||||||| Sbjct: 261 ctcgaacttcttgatgccctcagtcggccacacctg 226
>gb|AF200303.1|AF200303 Avena clauda ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, nuclear gene encoding chloroplast protein, partial cds Length = 594 Score = 60.0 bits (30), Expect = 7e-07 Identities = 35/37 (94%) Strand = Plus / Minus Query: 32 acctgcatgcacctgatncttccaccgttgctgacgc 68 ||||||||||||||||| ||||| ||||||||||||| Sbjct: 134 acctgcatgcacctgatccttccgccgttgctgacgc 98 Score = 56.0 bits (28), Expect = 1e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctg 36 ||||||||||||||||||||| || ||||||||||| Sbjct: 255 ctcgaacttcttgatgccctcaattggccacacctg 220
>gb|M37328.1|WHTRUBIAA T.aestivum ribulose-1,5-bisphosphate carboxylase/oxygenase (RUBISCO) gene, exons 1 and 2 Length = 2205 Score = 60.0 bits (30), Expect = 7e-07 Identities = 35/37 (94%) Strand = Plus / Minus Query: 32 acctgcatgcacctgatncttccaccgttgctgacgc 68 ||||||||||||||||| ||||| ||||||||||||| Sbjct: 841 acctgcatgcacctgatccttccgccgttgctgacgc 805 Score = 48.1 bits (24), Expect = 0.003 Identities = 30/32 (93%) Strand = Plus / Minus Query: 5 aacttcttgatgccctcgatgggccacacctg 36 ||||||||||||||||| || ||||||||||| Sbjct: 1157 aacttcttgatgccctcaattggccacacctg 1126
>dbj|AB042068.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:p13-1 Length = 985 Score = 60.0 bits (30), Expect = 7e-07 Identities = 35/37 (94%) Strand = Plus / Minus Query: 32 acctgcatgcacctgatncttccaccgttgctgacgc 68 ||||||||||||||||| ||||| ||||||||||||| Sbjct: 149 acctgcatgcacctgatccttccgccgttgctgacgc 113 Score = 56.0 bits (28), Expect = 1e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctg 36 ||||||||||||||||||||| || ||||||||||| Sbjct: 637 ctcgaacttcttgatgccctcaatcggccacacctg 602
>dbj|AB020945.1| Avena sativa DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Ave-A Length = 590 Score = 58.0 bits (29), Expect = 3e-06 Identities = 34/36 (94%) Strand = Plus / Minus Query: 32 acctgcatgcacctgatncttccaccgttgctgacg 67 ||||||||||| ||||| |||||||||||||||||| Sbjct: 135 acctgcatgcatctgatccttccaccgttgctgacg 100 Score = 56.0 bits (28), Expect = 1e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctg 36 ||||||||||||||||||||| || ||||||||||| Sbjct: 258 ctcgaacttcttgatgccctcaatcggccacacctg 223
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 56.0 bits (28), Expect = 1e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctg 36 ||||||||||||||||||||| || ||||||||||| Sbjct: 11261963 ctcgaacttcttgatgccctcaattggccacacctg 11261928 Score = 54.0 bits (27), Expect = 4e-05 Identities = 33/35 (94%) Strand = Plus / Plus Query: 1 ctcgaacttcttgatgccctcgatgggccacacct 35 ||||||||||||||||||||| || |||||||||| Sbjct: 10080118 ctcgaacttcttgatgccctcaatcggccacacct 10080152 Score = 52.0 bits (26), Expect = 2e-04 Identities = 34/37 (91%) Strand = Plus / Minus Query: 32 acctgcatgcacctgatncttccaccgttgctgacgc 68 |||||||| || ||||| ||||||||||||||||||| Sbjct: 11276478 acctgcatacagctgatccttccaccgttgctgacgc 11276442 Score = 48.1 bits (24), Expect = 0.003 Identities = 33/36 (91%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctg 36 |||||||||||| |||||||| || ||||||||||| Sbjct: 11319773 ctcgaacttcttaatgccctcaatcggccacacctg 11319738 Score = 42.1 bits (21), Expect = 0.17 Identities = 32/36 (88%) Strand = Plus / Minus Query: 32 acctgcatgcacctgatncttccaccgttgctgacg 67 ||||||||||| ||||| ||||| || ||||||||| Sbjct: 11319639 acctgcatgcatctgatccttccgccattgctgacg 11319604 Score = 42.1 bits (21), Expect = 0.17 Identities = 30/33 (90%) Strand = Plus / Minus Query: 5 aacttcttgatgccctcgatgggccacacctgc 37 |||||||||||||| || || |||||||||||| Sbjct: 11276622 aacttcttgatgccttcaatcggccacacctgc 11276590 Score = 42.1 bits (21), Expect = 0.17 Identities = 32/36 (88%) Strand = Plus / Minus Query: 32 acctgcatgcacctgatncttccaccgttgctgacg 67 |||||||||||| |||| ||||| || ||||||||| Sbjct: 11261821 acctgcatgcacttgatccttccgccattgctgacg 11261786 Score = 42.1 bits (21), Expect = 0.17 Identities = 32/36 (88%) Strand = Plus / Plus Query: 32 acctgcatgcacctgatncttccaccgttgctgacg 67 ||||||||||||||||| || || || ||||||||| Sbjct: 10080252 acctgcatgcacctgatcctgccgccattgctgacg 10080287 Score = 38.2 bits (19), Expect = 2.6 Identities = 27/30 (90%) Strand = Plus / Minus Query: 32 acctgcatgcacctgatncttccaccgttg 61 |||||||||||| |||| ||||| |||||| Sbjct: 11264859 acctgcatgcacttgatccttccgccgttg 11264830
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 56.0 bits (28), Expect = 1e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctg 36 ||||||||||||||||||||| || ||||||||||| Sbjct: 11261634 ctcgaacttcttgatgccctcaattggccacacctg 11261599 Score = 54.0 bits (27), Expect = 4e-05 Identities = 33/35 (94%) Strand = Plus / Plus Query: 1 ctcgaacttcttgatgccctcgatgggccacacct 35 ||||||||||||||||||||| || |||||||||| Sbjct: 10080003 ctcgaacttcttgatgccctcaatcggccacacct 10080037 Score = 52.0 bits (26), Expect = 2e-04 Identities = 34/37 (91%) Strand = Plus / Minus Query: 32 acctgcatgcacctgatncttccaccgttgctgacgc 68 |||||||| || ||||| ||||||||||||||||||| Sbjct: 11276149 acctgcatacagctgatccttccaccgttgctgacgc 11276113 Score = 48.1 bits (24), Expect = 0.003 Identities = 33/36 (91%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctg 36 |||||||||||| |||||||| || ||||||||||| Sbjct: 11319444 ctcgaacttcttaatgccctcaatcggccacacctg 11319409 Score = 42.1 bits (21), Expect = 0.17 Identities = 32/36 (88%) Strand = Plus / Minus Query: 32 acctgcatgcacctgatncttccaccgttgctgacg 67 ||||||||||| ||||| ||||| || ||||||||| Sbjct: 11319310 acctgcatgcatctgatccttccgccattgctgacg 11319275 Score = 42.1 bits (21), Expect = 0.17 Identities = 30/33 (90%) Strand = Plus / Minus Query: 5 aacttcttgatgccctcgatgggccacacctgc 37 |||||||||||||| || || |||||||||||| Sbjct: 11276293 aacttcttgatgccttcaatcggccacacctgc 11276261 Score = 42.1 bits (21), Expect = 0.17 Identities = 32/36 (88%) Strand = Plus / Minus Query: 32 acctgcatgcacctgatncttccaccgttgctgacg 67 |||||||||||| |||| ||||| || ||||||||| Sbjct: 11261492 acctgcatgcacttgatccttccgccattgctgacg 11261457 Score = 42.1 bits (21), Expect = 0.17 Identities = 32/36 (88%) Strand = Plus / Plus Query: 32 acctgcatgcacctgatncttccaccgttgctgacg 67 ||||||||||||||||| || || || ||||||||| Sbjct: 10080137 acctgcatgcacctgatcctgccgccattgctgacg 10080172 Score = 38.2 bits (19), Expect = 2.6 Identities = 27/30 (90%) Strand = Plus / Minus Query: 32 acctgcatgcacctgatncttccaccgttg 61 |||||||||||| |||| ||||| |||||| Sbjct: 11264530 acctgcatgcacttgatccttccgccgttg 11264501
>emb|BX119951.3|CNS09S4U Oryza sativa chromosome 12, . BAC OJ1523_A01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 127267 Score = 56.0 bits (28), Expect = 1e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctg 36 ||||||||||||||||||||| || ||||||||||| Sbjct: 110091 ctcgaacttcttgatgccctcaattggccacacctg 110126 Score = 52.0 bits (26), Expect = 2e-04 Identities = 34/37 (91%) Strand = Plus / Plus Query: 32 acctgcatgcacctgatncttccaccgttgctgacgc 68 |||||||| || ||||| ||||||||||||||||||| Sbjct: 95576 acctgcatacagctgatccttccaccgttgctgacgc 95612 Score = 48.1 bits (24), Expect = 0.003 Identities = 33/36 (91%) Strand = Plus / Plus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctg 36 |||||||||||| |||||||| || ||||||||||| Sbjct: 52281 ctcgaacttcttaatgccctcaatcggccacacctg 52316 Score = 42.1 bits (21), Expect = 0.17 Identities = 32/36 (88%) Strand = Plus / Plus Query: 32 acctgcatgcacctgatncttccaccgttgctgacg 67 |||||||||||| |||| ||||| || ||||||||| Sbjct: 110233 acctgcatgcacttgatccttccgccattgctgacg 110268 Score = 42.1 bits (21), Expect = 0.17 Identities = 30/33 (90%) Strand = Plus / Plus Query: 5 aacttcttgatgccctcgatgggccacacctgc 37 |||||||||||||| || || |||||||||||| Sbjct: 95432 aacttcttgatgccttcaatcggccacacctgc 95464 Score = 42.1 bits (21), Expect = 0.17 Identities = 32/36 (88%) Strand = Plus / Plus Query: 32 acctgcatgcacctgatncttccaccgttgctgacg 67 ||||||||||| ||||| ||||| || ||||||||| Sbjct: 52415 acctgcatgcatctgatccttccgccattgctgacg 52450 Score = 38.2 bits (19), Expect = 2.6 Identities = 27/30 (90%) Strand = Plus / Plus Query: 32 acctgcatgcacctgatncttccaccgttg 61 |||||||||||| |||| ||||| |||||| Sbjct: 107195 acctgcatgcacttgatccttccgccgttg 107224
>dbj|AB020959.1| Secale cereale DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sec-B Length = 789 Score = 56.0 bits (28), Expect = 1e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctg 36 ||||||||||||||||||||| || ||||||||||| Sbjct: 457 ctcgaacttcttgatgccctcaattggccacacctg 422 Score = 52.0 bits (26), Expect = 2e-04 Identities = 34/37 (91%) Strand = Plus / Minus Query: 32 acctgcatgcacctgatncttccaccgttgctgacgc 68 ||||||||||||||||| ||||| || |||||||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgacgc 99
>dbj|AB020958.1| Triticum aestivum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone CS-B2 Length = 781 Score = 56.0 bits (28), Expect = 1e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctg 36 ||||||||||||||||||||| || ||||||||||| Sbjct: 449 ctcgaacttcttgatgccctcaattggccacacctg 414 Score = 52.0 bits (26), Expect = 2e-04 Identities = 34/37 (91%) Strand = Plus / Minus Query: 32 acctgcatgcacctgatncttccaccgttgctgacgc 68 ||||||||||||||||| ||||| || |||||||||| Sbjct: 135 acctgcatgcacctgatccttcccccattgctgacgc 99
>dbj|AB020955.1| Triticum timopheevii subsp. armeniacum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Ara-B Length = 787 Score = 56.0 bits (28), Expect = 1e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctg 36 ||||||||||||||||||||| || ||||||||||| Sbjct: 455 ctcgaacttcttgatgccctcaattggccacacctg 420 Score = 52.0 bits (26), Expect = 2e-04 Identities = 34/37 (91%) Strand = Plus / Minus Query: 32 acctgcatgcacctgatncttccaccgttgctgacgc 68 ||||||||||||||||| ||||| || |||||||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgacgc 99
>dbj|AB020954.1| Triticum urartu DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Ura-B Length = 787 Score = 56.0 bits (28), Expect = 1e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctg 36 ||||||||||||||||||||| || ||||||||||| Sbjct: 455 ctcgaacttcttgatgccctcaattggccacacctg 420 Score = 52.0 bits (26), Expect = 2e-04 Identities = 34/37 (91%) Strand = Plus / Minus Query: 32 acctgcatgcacctgatncttccaccgttgctgacgc 68 ||||||||||||||||| ||||| || |||||||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgacgc 99
>dbj|AB020953.1| Aegilops squarrosa DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Squ-B Length = 781 Score = 56.0 bits (28), Expect = 1e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctg 36 ||||||||||||||||||||| || ||||||||||| Sbjct: 449 ctcgaacttcttgatgccctcaattggccacacctg 414 Score = 52.0 bits (26), Expect = 2e-04 Identities = 34/37 (91%) Strand = Plus / Minus Query: 32 acctgcatgcacctgatncttccaccgttgctgacgc 68 ||||||||||||||||| ||||| || |||||||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgacgc 99
>dbj|AB020952.1| Aegilops searsii DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sea-B Length = 728 Score = 56.0 bits (28), Expect = 1e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctg 36 ||||||||||||||||||||| || ||||||||||| Sbjct: 396 ctcgaacttcttgatgccctcaattggccacacctg 361 Score = 52.0 bits (26), Expect = 2e-04 Identities = 34/37 (91%) Strand = Plus / Minus Query: 32 acctgcatgcacctgatncttccaccgttgctgacgc 68 ||||||||||||||||| ||||| || |||||||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgacgc 99
>dbj|AB020951.1| Aegilops bicornis DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Bic-B Length = 783 Score = 56.0 bits (28), Expect = 1e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctg 36 ||||||||||||||||||||| || ||||||||||| Sbjct: 456 ctcgaacttcttgatgccctcaattggccacacctg 421 Score = 52.0 bits (26), Expect = 2e-04 Identities = 34/37 (91%) Strand = Plus / Minus Query: 32 acctgcatgcacctgatncttccaccgttgctgacgc 68 ||||||||||||||||| ||||| || |||||||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgacgc 99
>dbj|AB020950.1| Aegilops sharonensis DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sha-B Length = 792 Score = 56.0 bits (28), Expect = 1e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctg 36 ||||||||||||||||||||| || ||||||||||| Sbjct: 460 ctcgaacttcttgatgccctcaattggccacacctg 425
>dbj|AB020949.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Lon-B Length = 792 Score = 56.0 bits (28), Expect = 1e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctg 36 ||||||||||||||||||||| || ||||||||||| Sbjct: 460 ctcgaacttcttgatgccctcaattggccacacctg 425 Score = 52.0 bits (26), Expect = 2e-04 Identities = 34/37 (91%) Strand = Plus / Minus Query: 32 acctgcatgcacctgatncttccaccgttgctgacgc 68 ||||||||||||||||| ||||| || |||||||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgacgc 99
>dbj|AB020947.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe2-B Length = 738 Score = 56.0 bits (28), Expect = 1e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctg 36 ||||||||||||||||||||| || ||||||||||| Sbjct: 440 ctcgaacttcttgatgccctcaatcggccacacctg 405 Score = 52.0 bits (26), Expect = 2e-04 Identities = 34/37 (91%) Strand = Plus / Minus Query: 32 acctgcatgcacctgatncttccaccgttgctgacgc 68 ||||||||||||||||| ||||| || |||||||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgacgc 99
>dbj|AB020946.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe1-B Length = 787 Score = 56.0 bits (28), Expect = 1e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctg 36 ||||||||||||||||||||| || ||||||||||| Sbjct: 455 ctcgaacttcttgatgccctcaatcggccacacctg 420 Score = 52.0 bits (26), Expect = 2e-04 Identities = 34/37 (91%) Strand = Plus / Minus Query: 32 acctgcatgcacctgatncttccaccgttgctgacgc 68 ||||||||||||||||| ||||| || |||||||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgacgc 99
>dbj|AB020944.1| Agropyron intermedium DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Agr-A Length = 604 Score = 56.0 bits (28), Expect = 1e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctg 36 ||||||||||||||||||||| || ||||||||||| Sbjct: 272 ctcgaacttcttgatgccctcaatcggccacacctg 237 Score = 52.0 bits (26), Expect = 2e-04 Identities = 34/37 (91%) Strand = Plus / Minus Query: 32 acctgcatgcacctgatncttccaccgttgctgacgc 68 ||||||||||||||||| ||||| || |||||||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgacgc 99
>dbj|AB020942.1| Secale cereale DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sec-A Length = 591 Score = 56.0 bits (28), Expect = 1e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctg 36 ||||||||||||||||||||| || ||||||||||| Sbjct: 259 ctcgaacttcttgatgccctcaatcggccacacctg 224 Score = 50.1 bits (25), Expect = 7e-04 Identities = 33/36 (91%) Strand = Plus / Minus Query: 32 acctgcatgcacctgatncttccaccgttgctgacg 67 ||||||||||||||||| ||||| || ||||||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgacg 100
>dbj|AB020938.1| Aegilops squarrosa DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Squ-A Length = 607 Score = 56.0 bits (28), Expect = 1e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctg 36 ||||||||||||||||||||| || ||||||||||| Sbjct: 275 ctcgaacttcttgatgccctcaatcggccacacctg 240 Score = 52.0 bits (26), Expect = 2e-04 Identities = 34/37 (91%) Strand = Plus / Minus Query: 32 acctgcatgcacctgatncttccaccgttgctgacgc 68 ||||||||||||||||| ||||| || |||||||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgacgc 99
>dbj|AB020937.1| Aegilops searsii DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sea-A Length = 611 Score = 56.0 bits (28), Expect = 1e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctg 36 ||||||||||||||||||||| || ||||||||||| Sbjct: 279 ctcgaacttcttgatgccctcaatcggccacacctg 244 Score = 52.0 bits (26), Expect = 2e-04 Identities = 34/37 (91%) Strand = Plus / Minus Query: 32 acctgcatgcacctgatncttccaccgttgctgacgc 68 ||||||||||||||||| ||||| || |||||||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgacgc 99
>dbj|AB020931.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe3-A3 Length = 604 Score = 56.0 bits (28), Expect = 1e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctg 36 ||||||||||||||||||||| || ||||||||||| Sbjct: 272 ctcgaacttcttgatgccctcaatcggccacacctg 237 Score = 52.0 bits (26), Expect = 2e-04 Identities = 34/37 (91%) Strand = Plus / Minus Query: 32 acctgcatgcacctgatncttccaccgttgctgacgc 68 ||||||||||||||||| ||||| || |||||||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgacgc 99
>dbj|AB020930.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe3-A2 Length = 604 Score = 56.0 bits (28), Expect = 1e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctg 36 ||||||||||||||||||||| || ||||||||||| Sbjct: 272 ctcgaacttcttgatgccctcaatcggccacacctg 237 Score = 52.0 bits (26), Expect = 2e-04 Identities = 34/37 (91%) Strand = Plus / Minus Query: 32 acctgcatgcacctgatncttccaccgttgctgacgc 68 ||||||||||||||||| ||||| || |||||||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgacgc 99
>dbj|AB020929.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe3-A1 Length = 604 Score = 56.0 bits (28), Expect = 1e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctg 36 ||||||||||||||||||||| || ||||||||||| Sbjct: 272 ctcgaacttcttgatgccctcaatcggccacacctg 237 Score = 52.0 bits (26), Expect = 2e-04 Identities = 34/37 (91%) Strand = Plus / Minus Query: 32 acctgcatgcacctgatncttccaccgttgctgacgc 68 ||||||||||||||||| ||||| || |||||||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgacgc 99
>dbj|AB020928.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe2-A Length = 604 Score = 56.0 bits (28), Expect = 1e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctg 36 ||||||||||||||||||||| || ||||||||||| Sbjct: 272 ctcgaacttcttgatgccctcaatcggccacacctg 237 Score = 52.0 bits (26), Expect = 2e-04 Identities = 34/37 (91%) Strand = Plus / Minus Query: 32 acctgcatgcacctgatncttccaccgttgctgacgc 68 ||||||||||||||||| ||||| || |||||||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgacgc 99
>dbj|AB020927.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe1-A1 Length = 604 Score = 56.0 bits (28), Expect = 1e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctg 36 ||||||||||||||||||||| || ||||||||||| Sbjct: 272 ctcgaacttcttgatgccctcaatcggccacacctg 237 Score = 52.0 bits (26), Expect = 2e-04 Identities = 34/37 (91%) Strand = Plus / Minus Query: 32 acctgcatgcacctgatncttccaccgttgctgacgc 68 ||||||||||||||||| ||||| || |||||||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgacgc 99
>dbj|AB020926.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds Length = 604 Score = 56.0 bits (28), Expect = 1e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctg 36 ||||||||||||||||||||| || ||||||||||| Sbjct: 272 ctcgaacttcttgatgccctcaatcggccacacctg 237 Score = 52.0 bits (26), Expect = 2e-04 Identities = 34/37 (91%) Strand = Plus / Minus Query: 32 acctgcatgcacctgatncttccaccgttgctgacgc 68 ||||||||||||||||| ||||| || |||||||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgacgc 99
>dbj|AB020960.1| Bromus catharticus DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Bro-B Length = 784 Score = 56.0 bits (28), Expect = 1e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctg 36 ||||||||||||||||||||| || ||||||||||| Sbjct: 452 ctcgaacttcttgatgccctcaattggccacacctg 417 Score = 52.0 bits (26), Expect = 2e-04 Identities = 34/37 (91%) Strand = Plus / Minus Query: 32 acctgcatgcacctgatncttccaccgttgctgacgc 68 ||||||||||||||||| ||||| ||| ||||||||| Sbjct: 132 acctgcatgcacctgatccttccgccgctgctgacgc 96
>dbj|AB042069.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:6, subclone:16 Length = 5980 Score = 56.0 bits (28), Expect = 1e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctg 36 |||||||||||||||||||||||| ||||| ||||| Sbjct: 3978 ctcgaacttcttgatgccctcgatcggccaaacctg 3943 Score = 56.0 bits (28), Expect = 1e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctg 36 ||||||||||||||||||||| || ||||||||||| Sbjct: 915 ctcgaacttcttgatgccctcaatcggccacacctg 880 Score = 52.0 bits (26), Expect = 2e-04 Identities = 34/37 (91%) Strand = Plus / Minus Query: 32 acctgcatgcacctgatncttccaccgttgctgacgc 68 ||||||||||||||||| ||||| || |||||||||| Sbjct: 771 acctgcatgcacctgatccttccgccattgctgacgc 735
>dbj|AB042065.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase Small subunit, complete cds, clone:p6-1 Length = 638 Score = 56.0 bits (28), Expect = 1e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctg 36 ||||||||||||||||||||| || ||||||||||| Sbjct: 290 ctcgaacttcttgatgccctcaatcggccacacctg 255 Score = 52.0 bits (26), Expect = 2e-04 Identities = 34/37 (91%) Strand = Plus / Minus Query: 32 acctgcatgcacctgatncttccaccgttgctgacgc 68 ||||||||||||||||| ||||| || |||||||||| Sbjct: 146 acctgcatgcacctgatccttccgccattgctgacgc 110
>gb|AY023648.1| Oryza sativa microsatellite MRG5973 containing (TTC)X13, closest to marker S10704, genomic sequence Length = 239 Score = 54.0 bits (27), Expect = 4e-05 Identities = 33/35 (94%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacct 35 ||||||||||||||||||||| || |||||||||| Sbjct: 207 ctcgaacttcttgatgccctcaatcggccacacct 173 Score = 42.1 bits (21), Expect = 0.17 Identities = 32/36 (88%) Strand = Plus / Minus Query: 32 acctgcatgcacctgatncttccaccgttgctgacg 67 ||||||||||||||||| || || || ||||||||| Sbjct: 73 acctgcatgcacctgatcctgccgccattgctgacg 38
>gb|BT012936.1| Lycopersicon esculentum clone 114099R, mRNA sequence Length = 1261 Score = 54.0 bits (27), Expect = 4e-05 Identities = 35/38 (92%) Strand = Plus / Minus Query: 26 ggccacacctgcatgcacctgatncttccaccgttgct 63 ||||||||||||||||| |||| |||||||||||||| Sbjct: 771 ggccacacctgcatgcaactgactcttccaccgttgct 734
>gb|DQ418485.1| Zingiber officinale ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit mRNA, partial cds; chloroplast Length = 367 Score = 54.0 bits (27), Expect = 4e-05 Identities = 39/43 (90%) Strand = Plus / Minus Query: 2 tcgaacttcttgatgccctcgatgggccacacctgcatgcacc 44 ||||||||||| | |||||||| ||||||||||||||||||| Sbjct: 214 tcgaacttcttcttcccctcgatcggccacacctgcatgcacc 172
>emb|X07515.1|OSRBCS Rice rbcS gene for ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit (EC 4.1.1.39) Length = 1110 Score = 54.0 bits (27), Expect = 4e-05 Identities = 33/35 (94%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacct 35 ||||||||||||||||||||| || |||||||||| Sbjct: 526 ctcgaacttcttgatgccctcaatcggccacacct 492
>emb|AL731739.4|CNS08C7O Oryza sativa chromosome 12, . BAC OSJNBa0056I18 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145890 Score = 54.0 bits (27), Expect = 4e-05 Identities = 33/35 (94%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacct 35 ||||||||||||||||||||| || |||||||||| Sbjct: 82503 ctcgaacttcttgatgccctcaatcggccacacct 82469 Score = 42.1 bits (21), Expect = 0.17 Identities = 32/36 (88%) Strand = Plus / Minus Query: 32 acctgcatgcacctgatncttccaccgttgctgacg 67 ||||||||||||||||| || || || ||||||||| Sbjct: 82369 acctgcatgcacctgatcctgccgccattgctgacg 82334
>dbj|AB020957.1| Triticum aestivum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone CS-B1 Length = 787 Score = 54.0 bits (27), Expect = 4e-05 Identities = 33/35 (94%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacct 35 ||||||||||||||||||||| || |||||||||| Sbjct: 455 ctcgaacttcttgatgccctcaattggccacacct 421 Score = 52.0 bits (26), Expect = 2e-04 Identities = 34/37 (91%) Strand = Plus / Minus Query: 32 acctgcatgcacctgatncttccaccgttgctgacgc 68 ||||||||||||||||| ||||| || |||||||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgacgc 99
>dbj|AB020956.1| Triticum turgidum subsp. dicoccoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Dic-B Length = 787 Score = 54.0 bits (27), Expect = 4e-05 Identities = 33/35 (94%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacct 35 ||||||||||||||||||||| || |||||||||| Sbjct: 455 ctcgaacttcttgatgccctcaattggccacacct 421 Score = 52.0 bits (26), Expect = 2e-04 Identities = 34/37 (91%) Strand = Plus / Minus Query: 32 acctgcatgcacctgatncttccaccgttgctgacgc 68 ||||||||||||||||| ||||| || |||||||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgacgc 99
>dbj|AB020948.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe3-B Length = 772 Score = 54.0 bits (27), Expect = 4e-05 Identities = 33/35 (94%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacct 35 ||||||||||||||||||||| || |||||||||| Sbjct: 440 ctcgaacttcttgatgccctcaattggccacacct 406 Score = 52.0 bits (26), Expect = 2e-04 Identities = 34/37 (91%) Strand = Plus / Minus Query: 32 acctgcatgcacctgatncttccaccgttgctgacgc 68 ||||||||||||||||| ||||| || |||||||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgacgc 99
>dbj|AB020943.1| Hordeum vulgare DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Hor-A Length = 605 Score = 52.0 bits (26), Expect = 2e-04 Identities = 34/37 (91%) Strand = Plus / Minus Query: 32 acctgcatgcacctgatncttccaccgttgctgacgc 68 ||||||||||||||||| ||||| || |||||||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgacgc 99 Score = 48.1 bits (24), Expect = 0.003 Identities = 33/36 (91%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctg 36 ||||||||||||||| ||||| || ||||||||||| Sbjct: 273 ctcgaacttcttgataccctcaatcggccacacctg 238
>dbj|AB020941.1| Triticum aestivum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone CS-A Length = 605 Score = 52.0 bits (26), Expect = 2e-04 Identities = 34/37 (91%) Strand = Plus / Minus Query: 32 acctgcatgcacctgatncttccaccgttgctgacgc 68 ||||||||||||||||| ||||| || |||||||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgacgc 99 Score = 48.1 bits (24), Expect = 0.003 Identities = 33/36 (91%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctg 36 ||||||||||||||| ||||| || ||||||||||| Sbjct: 273 ctcgaacttcttgataccctcaatcggccacacctg 238
>dbj|AB020940.1| Triticum turgidum subsp. dicoccoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Dic-A Length = 605 Score = 52.0 bits (26), Expect = 2e-04 Identities = 34/37 (91%) Strand = Plus / Minus Query: 32 acctgcatgcacctgatncttccaccgttgctgacgc 68 ||||||||||||||||| ||||| || |||||||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgacgc 99 Score = 48.1 bits (24), Expect = 0.003 Identities = 33/36 (91%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctg 36 ||||||||||||||| ||||| || ||||||||||| Sbjct: 273 ctcgaacttcttgataccctcaatcggccacacctg 238
>dbj|AB020936.1| Aegilops bicornis DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Bic-A Length = 605 Score = 52.0 bits (26), Expect = 2e-04 Identities = 34/37 (91%) Strand = Plus / Minus Query: 32 acctgcatgcacctgatncttccaccgttgctgacgc 68 ||||||||||||||||| ||||| || |||||||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgacgc 99 Score = 48.1 bits (24), Expect = 0.003 Identities = 33/36 (91%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctg 36 ||||||||||||||| ||||| || ||||||||||| Sbjct: 273 ctcgaacttcttgataccctcaatcggccacacctg 238
>dbj|AB020935.1| Aegilops sharonensis DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sha-A Length = 605 Score = 52.0 bits (26), Expect = 2e-04 Identities = 34/37 (91%) Strand = Plus / Minus Query: 32 acctgcatgcacctgatncttccaccgttgctgacgc 68 ||||||||||||||||| ||||| || |||||||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgacgc 99 Score = 40.1 bits (20), Expect = 0.67 Identities = 32/36 (88%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctg 36 |||||| |||||||| ||||| || ||||||||||| Sbjct: 273 ctcgaatttcttgataccctcaatcggccacacctg 238
>dbj|AB020934.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Lon-A3 Length = 605 Score = 52.0 bits (26), Expect = 2e-04 Identities = 34/37 (91%) Strand = Plus / Minus Query: 32 acctgcatgcacctgatncttccaccgttgctgacgc 68 ||||||||||||||||| ||||| || |||||||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgacgc 99 Score = 48.1 bits (24), Expect = 0.003 Identities = 33/36 (91%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctg 36 ||||||||||||||| ||||| || ||||||||||| Sbjct: 273 ctcgaacttcttgataccctcaatcggccacacctg 238
>dbj|AB020933.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Lon-A2 Length = 605 Score = 52.0 bits (26), Expect = 2e-04 Identities = 34/37 (91%) Strand = Plus / Minus Query: 32 acctgcatgcacctgatncttccaccgttgctgacgc 68 ||||||||||||||||| ||||| || |||||||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgacgc 99 Score = 48.1 bits (24), Expect = 0.003 Identities = 33/36 (91%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctg 36 ||||||||||||||| ||||| || ||||||||||| Sbjct: 273 ctcgaacttcttgataccctcaatcggccacacctg 238
>dbj|AB020932.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Lon-A1 Length = 605 Score = 52.0 bits (26), Expect = 2e-04 Identities = 34/37 (91%) Strand = Plus / Minus Query: 32 acctgcatgcacctgatncttccaccgttgctgacgc 68 ||||||||||||||||| ||||| || |||||||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgacgc 99 Score = 48.1 bits (24), Expect = 0.003 Identities = 33/36 (91%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctg 36 ||||||||||||||| ||||| || ||||||||||| Sbjct: 273 ctcgaacttcttgataccctcaatcggccacacctg 238
>emb|Y00322.1|ZMRBCS Maize rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (EC 4.1.1.39) Length = 1648 Score = 50.1 bits (25), Expect = 7e-04 Identities = 33/36 (91%) Strand = Plus / Minus Query: 32 acctgcatgcacctgatncttccaccgttgctgacg 67 ||||||||||||| ||| ||||| |||||||||||| Sbjct: 639 acctgcatgcaccggatccttccgccgttgctgacg 604
>emb|Y09214.1|ZMRUBSMSU Z.mays rubisco small subunit gene Length = 1274 Score = 50.1 bits (25), Expect = 7e-04 Identities = 33/36 (91%) Strand = Plus / Minus Query: 32 acctgcatgcacctgatncttccaccgttgctgacg 67 ||||||||||||| ||| ||||| |||||||||||| Sbjct: 344 acctgcatgcaccggatccttccgccgttgctgacg 309
>gb|M86717.1|SCFBCS1A Saccharum hybrid cultivar H32-8560 ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit gene, complete cds Length = 2328 Score = 48.1 bits (24), Expect = 0.003 Identities = 32/35 (91%) Strand = Plus / Minus Query: 32 acctgcatgcacctgatncttccaccgttgctgac 66 ||||||||||||| ||| ||||| ||||||||||| Sbjct: 1317 acctgcatgcaccggatccttccgccgttgctgac 1283
>dbj|AB042067.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:p10-1 Length = 629 Score = 48.1 bits (24), Expect = 0.003 Identities = 33/36 (91%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctg 36 ||||||||||||||| ||||| || ||||||||||| Sbjct: 281 ctcgaacttcttgataccctcaatcggccacacctg 246 Score = 40.1 bits (20), Expect = 0.67 Identities = 22/23 (95%) Strand = Plus / Minus Query: 32 acctgcatgcacctgatncttcc 54 ||||||||||||||||| ||||| Sbjct: 143 acctgcatgcacctgatccttcc 121
>emb|X17231.1|LGRBCS5B Lemna gibba rbcS gene SSU5B for small subunit of ribulose bisphosphate carboxylase (EC 4.1.1.39) Length = 800 Score = 44.1 bits (22), Expect = 0.043 Identities = 37/42 (88%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctgcatgca 42 |||||||||||||| |||||| ||||||||||||||||| Sbjct: 210 ctcgaacttcttgaggccctccggcggccacacctgcatgca 169
>emb|X17230.1|LGRBCS5A Lemna gibba rbcS gene SSU5A for small subunit of ribulose bisphosphate carboxylase (EC 4.1.1.39) Length = 858 Score = 44.1 bits (22), Expect = 0.043 Identities = 37/42 (88%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctgcatgca 42 |||||||||||||| |||||| ||||||||||||||||| Sbjct: 210 ctcgaacttcttgaggccctccggcggccacacctgcatgca 169
>emb|AJ419826.1|CAR419826 Coffea arabica mRNA for rubisco small subunit (rbcs1 gene) Length = 934 Score = 42.1 bits (21), Expect = 0.17 Identities = 32/36 (88%) Strand = Plus / Minus Query: 26 ggccacacctgcatgcacctgatncttccaccgttg 61 |||||||||||||||||| || |||||||||||| Sbjct: 238 ggccacacctgcatgcactggactcttccaccgttg 203
>emb|X05986.1|LERBCS3C Tomato rbcS3C gene for ribulose 1,5-biphosp[hate carboxylase/oxygenase small subunit Length = 1341 Score = 42.1 bits (21), Expect = 0.17 Identities = 29/32 (90%) Strand = Plus / Minus Query: 32 acctgcatgcacctgatncttccaccgttgct 63 ||||||||||| |||| |||||||||||||| Sbjct: 476 acctgcatgcaactgactcttccaccgttgct 445
>emb|X05985.1|LERBCS3B Tomato rbcS3B gene for ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit Length = 1054 Score = 42.1 bits (21), Expect = 0.17 Identities = 29/32 (90%) Strand = Plus / Minus Query: 32 acctgcatgcacctgatncttccaccgttgct 63 ||||||||||| |||| |||||||||||||| Sbjct: 459 acctgcatgcaactgactcttccaccgttgct 428
>emb|X05984.1|LERBCS3A Tomato rbcS3A gene for ribulose 1,5-bisphosphate carboxylae/oxygenase small subunit Length = 1520 Score = 42.1 bits (21), Expect = 0.17 Identities = 29/32 (90%) Strand = Plus / Minus Query: 32 acctgcatgcacctgatncttccaccgttgct 63 ||||||||||| |||| |||||||||||||| Sbjct: 556 acctgcatgcaactgactcttccaccgttgct 525
>gb|M13544.1|TOMRBCSC Tomato (L.esculentum) ribulose-1,5-bisphosphate carboxylase/oxygenase (RBCS) small subunit gene, clone Rbcs-3A Length = 1027 Score = 42.1 bits (21), Expect = 0.17 Identities = 29/32 (90%) Strand = Plus / Minus Query: 32 acctgcatgcacctgatncttccaccgttgct 63 ||||||||||| |||| |||||||||||||| Sbjct: 314 acctgcatgcaactgactcttccaccgttgct 283
>gb|M31640.1|CIPRBC Ice plant ribulose-1-5-bisphosphate carboxylase (rbc5) gene, complete cds Length = 776 Score = 42.1 bits (21), Expect = 0.17 Identities = 32/36 (88%) Strand = Plus / Minus Query: 26 ggccacacctgcatgcacctgatncttccaccgttg 61 |||||||||||||||||| || |||||||||||| Sbjct: 221 ggccacacctgcatgcactggactcttccaccgttg 186
>dbj|D11112.1|TOMRBCO Tomato ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit gene, complete cds Length = 4124 Score = 42.1 bits (21), Expect = 0.17 Identities = 29/32 (90%) Strand = Plus / Minus Query: 32 acctgcatgcacctgatncttccaccgttgct 63 ||||||||||| |||| |||||||||||||| Sbjct: 3529 acctgcatgcaactgactcttccaccgttgct 3498
>dbj|AB067656.1| Oryza sativa (japonica cultivar-group) OsrbcS gene for small subunit of ribulose-1,5-bisphosphate carboxylase, promoter region and partial cds Length = 1815 Score = 42.1 bits (21), Expect = 0.17 Identities = 32/36 (88%) Strand = Plus / Minus Query: 32 acctgcatgcacctgatncttccaccgttgctgacg 67 ||||||||||||||||| || || || ||||||||| Sbjct: 1699 acctgcatgcacctgatcctgccgccattgctgacg 1664
>gb|AF034479.1| Zantedeschia aethiopica ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 968 Score = 40.1 bits (20), Expect = 0.67 Identities = 38/44 (86%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacctgcatgcacc 44 |||||||||||| ||||||| ||||||||||||||||||| Sbjct: 247 ctcgaacttcttcttgccctccggcggccacacctgcatgcacc 204
>gb|BT013023.1| Lycopersicon esculentum clone 114270R, mRNA sequence Length = 1097 Score = 38.2 bits (19), Expect = 2.6 Identities = 33/38 (86%) Strand = Plus / Minus Query: 26 ggccacacctgcatgcacctgatncttccaccgttgct 63 ||||||||||||||||| || | |||||||| ||||| Sbjct: 546 ggccacacctgcatgcagctaactcttccaccattgct 509
>emb|AL121958.6|HSDJ71H19 Human DNA sequence from clone RP1-71H19 on chromosome 6 Contains part of the PRIM2A gene for primase polypeptide 2A (58kD) and a novel gene, complete sequence Length = 138411 Score = 38.2 bits (19), Expect = 2.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 29 cacacctgcatgcacctga 47 ||||||||||||||||||| Sbjct: 78129 cacacctgcatgcacctga 78147
>gb|AC183417.2| Pan troglodytes BAC clone CH251-173K9 from chromosome 6, complete sequence Length = 158234 Score = 38.2 bits (19), Expect = 2.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 29 cacacctgcatgcacctga 47 ||||||||||||||||||| Sbjct: 40445 cacacctgcatgcacctga 40463
>gb|AC182461.3| Pan troglodytes BAC clone CH251-673H10 from chromosome 6, complete sequence Length = 188415 Score = 38.2 bits (19), Expect = 2.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 29 cacacctgcatgcacctga 47 ||||||||||||||||||| Sbjct: 27970 cacacctgcatgcacctga 27952
>ref|NM_167358.1| Drosophila melanogaster Inositol 1,4,5-triphosphate kinase 2 CG1630-RB, transcript variant B (IP3K2), mRNA Length = 2816 Score = 38.2 bits (19), Expect = 2.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 7 cttcttgatgccctcgatg 25 ||||||||||||||||||| Sbjct: 1787 cttcttgatgccctcgatg 1769
>ref|NM_132647.1| Drosophila melanogaster Inositol 1,4,5-triphosphate kinase 2 CG1630-RA, transcript variant A (IP3K2), mRNA Length = 2695 Score = 38.2 bits (19), Expect = 2.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 7 cttcttgatgccctcgatg 25 ||||||||||||||||||| Sbjct: 1666 cttcttgatgccctcgatg 1648
>gb|AY084158.1| Drosophila melanogaster RE35745 full insert cDNA Length = 2694 Score = 38.2 bits (19), Expect = 2.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 7 cttcttgatgccctcgatg 25 ||||||||||||||||||| Sbjct: 1666 cttcttgatgccctcgatg 1648
>gb|AC001228.1|HSAC001228 244Kb Contig from Human Chromosome 11p15.5 spanning D11S1 through D11S25, complete sequence Length = 244254 Score = 38.2 bits (19), Expect = 2.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 23 atgggccacacctgcatgc 41 ||||||||||||||||||| Sbjct: 145084 atgggccacacctgcatgc 145102
>gb|M25613.1|PEARUBP2 Pisum sativum ribulose 1,5 bisphosphate carboxylase (RuBP) mRNA, partial cds Length = 674 Score = 38.2 bits (19), Expect = 2.6 Identities = 33/38 (86%) Strand = Plus / Minus Query: 26 ggccacacctgcatgcacctgatncttccaccgttgct 63 |||||||||||||||||| | | |||||||| ||||| Sbjct: 62 ggccacacctgcatgcactttactcttccaccattgct 25
>gb|AC131971.9| Homo sapiens chromosome 11, clone CTC-343N3, complete sequence Length = 176226 Score = 38.2 bits (19), Expect = 2.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 23 atgggccacacctgcatgc 41 ||||||||||||||||||| Sbjct: 130593 atgggccacacctgcatgc 130575
>dbj|AK109003.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-153-H01, full insert sequence Length = 1188 Score = 38.2 bits (19), Expect = 2.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 aacttcttgatgccctcga 23 ||||||||||||||||||| Sbjct: 250 aacttcttgatgccctcga 232
>gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome Length = 4096345 Score = 38.2 bits (19), Expect = 2.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 aacttcttgatgccctcga 23 ||||||||||||||||||| Sbjct: 3271277 aacttcttgatgccctcga 3271259
>gb|AF039014.1|AF039014 Fritillaria agrestis clone TA8 ribulose 1,5 bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 592 Score = 38.2 bits (19), Expect = 2.6 Identities = 31/35 (88%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacct 35 |||||||||||| | ||| ||||||||||||||| Sbjct: 278 ctcgaacttcttcaaccccacgatgggccacacct 244
>gb|AF039011.1|AF039011 Fritillaria agrestis clone TA22 ribulose 1,5 bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 591 Score = 38.2 bits (19), Expect = 2.6 Identities = 31/35 (88%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacct 35 |||||||||||| | ||| ||||||||||||||| Sbjct: 277 ctcgaacttcttcaaccccacgatgggccacacct 243
>gb|AF039008.1|AF039008 Fritillaria agrestis clone TA15 ribulose 1,5 bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 592 Score = 38.2 bits (19), Expect = 2.6 Identities = 31/35 (88%) Strand = Plus / Minus Query: 1 ctcgaacttcttgatgccctcgatgggccacacct 35 |||||||||||| | ||| ||||||||||||||| Sbjct: 278 ctcgaacttcttcaaccccacgatgggccacacct 244
>gb|U51281.1|HSU51281 Human chromosome 11 cosmid cSRL-87f11 Length = 37972 Score = 38.2 bits (19), Expect = 2.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 23 atgggccacacctgcatgc 41 ||||||||||||||||||| Sbjct: 17880 atgggccacacctgcatgc 17862
>gb|L26605.1|SLARBCS Stellaria longipes ribulose-1,5-bisphosphate carboxylase/oxygenase (rbcS) mRNA, complete cds Length = 723 Score = 38.2 bits (19), Expect = 2.6 Identities = 33/38 (86%) Strand = Plus / Minus Query: 26 ggccacacctgcatgcacctgatncttccaccgttgct 63 ||||||||||||||||| |||| | |||||| ||||| Sbjct: 217 ggccacacctgcatgcatctgactcgtccaccattgct 180
>gb|M15236.1|TOMRBCSE Tomato RuBP carboxylase small subunit LESS5 mRNA Length = 742 Score = 38.2 bits (19), Expect = 2.6 Identities = 33/38 (86%) Strand = Plus / Minus Query: 26 ggccacacctgcatgcacctgatncttccaccgttgct 63 ||||||||||||||||| || | |||||||| ||||| Sbjct: 212 ggccacacctgcatgcagctaactcttccaccattgct 175
>gb|M13543.1|TOMRBCSB Tomato (L.esculentum) ribulose-1,5-bisphosphate carboxylase/oxygenase (RBCS) small subunit mRNA, clone Rbcs-2A Length = 599 Score = 38.2 bits (19), Expect = 2.6 Identities = 33/38 (86%) Strand = Plus / Minus Query: 26 ggccacacctgcatgcacctgatncttccaccgttgct 63 ||||||||||||||||| || | |||||||| ||||| Sbjct: 199 ggccacacctgcatgcagctaactcttccaccattgct 162
>gb|J03613.1|POTRBCS Potato (S.tuberosum) ribulose bisphosphate carboxylase (rbcS) mRNA, complete cds Length = 546 Score = 38.2 bits (19), Expect = 2.6 Identities = 33/38 (86%) Strand = Plus / Minus Query: 26 ggccacacctgcatgcacctgatncttccaccgttgct 63 ||||||||||||||||| || | | |||||||||||| Sbjct: 188 ggccacacctgcatgcatctaacacgtccaccgttgct 151
>gb|J01257.1|PEARUBPA Pea (P.sativum) ribulose 1,5-bisphosphate carboxylase small subunit mRNA, clone pSS15 Length = 619 Score = 38.2 bits (19), Expect = 2.6 Identities = 33/38 (86%) Strand = Plus / Minus Query: 26 ggccacacctgcatgcacctgatncttccaccgttgct 63 |||||||||||||||||| | | |||||||| ||||| Sbjct: 113 ggccacacctgcatgcactttactcttccaccattgct 76 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 357,399 Number of Sequences: 3902068 Number of extensions: 357399 Number of successful extensions: 21836 Number of sequences better than 10.0: 129 Number of HSP's better than 10.0 without gapping: 126 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 21602 Number of HSP's gapped (non-prelim): 230 length of query: 68 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 47 effective length of database: 17,151,101,840 effective search space: 806101786480 effective search space used: 806101786480 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)
