ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal3m04 |
|---|---|
| Clone Library Name | barley_pub |
>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,| chloroplast precursor (RuBisCO activase A) (RA A) Length = 464 Score = 167 bits (424), Expect(4) = 2e-67 Identities = 82/83 (98%), Positives = 83/83 (100%) Frame = -1 Query: 540 NEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD 361 +EVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD Sbjct: 345 DEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD 404 Query: 360 TYMSQAALGDANQDAMKTGSFYG 292 TYMSQAALGDANQDAMKTGSFYG Sbjct: 405 TYMSQAALGDANQDAMKTGSFYG 427 Score = 86.3 bits (212), Expect(4) = 2e-67 Identities = 38/38 (100%), Positives = 38/38 (100%) Frame = -3 Query: 244 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 131 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF Sbjct: 427 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 464 Score = 42.0 bits (97), Expect(4) = 2e-67 Identities = 18/19 (94%), Positives = 19/19 (100%) Frame = -3 Query: 595 FPGQSIDFFGALRARVYDE 539 FPGQSIDFFGALRARVYD+ Sbjct: 327 FPGQSIDFFGALRARVYDD 345 Score = 21.9 bits (45), Expect(4) = 2e-67 Identities = 9/9 (100%), Positives = 9/9 (100%) Frame = -2 Query: 617 VVKIVDTFP 591 VVKIVDTFP Sbjct: 320 VVKIVDTFP 328
>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,| chloroplast precursor (RuBisCO activase 1) (RA 1) (RubisCO activase alpha form) Length = 476 Score = 130 bits (327), Expect(4) = 2e-49 Identities = 60/83 (72%), Positives = 73/83 (87%) Frame = -1 Query: 540 NEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD 361 +EVRKWV G++ IGK+LVNS++GP +FEQPKMT++KLL YG MLVQEQ+NVKRVQLAD Sbjct: 355 DEVRKWVSEVGVDTIGKKLVNSKEGPPSFEQPKMTIDKLLGYGGMLVQEQENVKRVQLAD 414 Query: 360 TYMSQAALGDANQDAMKTGSFYG 292 YMS+AALGDAN DA+K G+FYG Sbjct: 415 KYMSEAALGDANNDAIKRGTFYG 437 Score = 66.6 bits (161), Expect(4) = 2e-49 Identities = 30/40 (75%), Positives = 33/40 (82%), Gaps = 1/40 (2%) Frame = -3 Query: 247 GGKGAQQ-GTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 131 GG+ AQQ G +PVPEGCTD A NYDPTARSDDGSC+Y F Sbjct: 437 GGQAAQQVGNVPVPEGCTDPQATNYDPTARSDDGSCVYKF 476 Score = 39.3 bits (90), Expect(4) = 2e-49 Identities = 17/19 (89%), Positives = 18/19 (94%) Frame = -3 Query: 595 FPGQSIDFFGALRARVYDE 539 FPGQSIDFFGALRARVY + Sbjct: 337 FPGQSIDFFGALRARVYHD 355 Score = 20.8 bits (42), Expect(4) = 2e-49 Identities = 7/9 (77%), Positives = 9/9 (100%) Frame = -2 Query: 617 VVKIVDTFP 591 +VK+VDTFP Sbjct: 330 IVKLVDTFP 338
>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 474 Score = 127 bits (318), Expect(3) = 2e-49 Identities = 61/83 (73%), Positives = 73/83 (87%) Frame = -1 Query: 540 NEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD 361 +EVRK+V S G+E IGKRLVNSR+GP FEQP+MT EKL+EYG+MLV EQ+NVKRVQLA+ Sbjct: 355 DEVRKFVESLGVEKIGKRLVNSREGPPVFEQPEMTYEKLMEYGNMLVMEQENVKRVQLAE 414 Query: 360 TYMSQAALGDANQDAMKTGSFYG 292 TY+SQAALGDAN DA+ G+FYG Sbjct: 415 TYLSQAALGDANADAIGRGTFYG 437 Score = 67.8 bits (164), Expect(3) = 2e-49 Identities = 29/38 (76%), Positives = 33/38 (86%) Frame = -3 Query: 244 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 131 GKGAQQ LPVPEGCTD A+N+DPTARSDDG+C+Y F Sbjct: 437 GKGAQQVNLPVPEGCTDPVAENFDPTARSDDGTCVYNF 474 Score = 42.0 bits (97), Expect(3) = 2e-49 Identities = 18/19 (94%), Positives = 19/19 (100%) Frame = -3 Query: 595 FPGQSIDFFGALRARVYDE 539 FPGQSIDFFGALRARVYD+ Sbjct: 337 FPGQSIDFFGALRARVYDD 355
>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 472 Score = 131 bits (330), Expect(3) = 7e-49 Identities = 59/83 (71%), Positives = 75/83 (90%) Frame = -1 Query: 540 NEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD 361 +EVRKWV S G++N+GK+LVNS+DGP FEQP+MT++KL+EYG+MLVQEQ+NVKRVQLAD Sbjct: 353 DEVRKWVNSVGVDNVGKKLVNSKDGPPVFEQPEMTLQKLMEYGNMLVQEQENVKRVQLAD 412 Query: 360 TYMSQAALGDANQDAMKTGSFYG 292 YMS AALGDAN+DA+ G+F+G Sbjct: 413 QYMSSAALGDANKDAIDRGTFFG 435 Score = 63.9 bits (154), Expect(3) = 7e-49 Identities = 28/36 (77%), Positives = 30/36 (83%) Frame = -3 Query: 244 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLY 137 GK AQQ +LPV +GCTD AKNYDPTARSDDGSC Y Sbjct: 435 GKAAQQVSLPVAQGCTDPEAKNYDPTARSDDGSCTY 470 Score = 39.3 bits (90), Expect(3) = 7e-49 Identities = 17/19 (89%), Positives = 18/19 (94%) Frame = -3 Query: 595 FPGQSIDFFGALRARVYDE 539 FPGQSIDFFGALRARVY + Sbjct: 335 FPGQSIDFFGALRARVYHD 353
>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,| chloroplast precursor (RuBisCO activase B) (RA B) Length = 425 Score = 143 bits (361), Expect(2) = 2e-40 Identities = 66/83 (79%), Positives = 76/83 (91%) Frame = -1 Query: 540 NEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD 361 +EVRKWVG G+ENI KRLVNSR+GP TF+QPKMT+EKL+EYGHMLVQEQ+NVKRVQLAD Sbjct: 342 DEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLAD 401 Query: 360 TYMSQAALGDANQDAMKTGSFYG 292 Y+S+AALG AN DAMKTG+FYG Sbjct: 402 KYLSEAALGQANDDAMKTGAFYG 424 Score = 42.0 bits (97), Expect(2) = 2e-40 Identities = 18/19 (94%), Positives = 19/19 (100%) Frame = -3 Query: 595 FPGQSIDFFGALRARVYDE 539 FPGQSIDFFGALRARVYD+ Sbjct: 324 FPGQSIDFFGALRARVYDD 342
>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 432 Score = 142 bits (359), Expect(2) = 4e-40 Identities = 66/83 (79%), Positives = 77/83 (92%) Frame = -1 Query: 540 NEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD 361 +EVRKWV TG+ENIGKRLVNSR+GP FEQPKMT+EKL+EYG+MLV+EQ+NVKRVQLA+ Sbjct: 345 DEVRKWVSDTGVENIGKRLVNSREGPPEFEQPKMTIEKLIEYGYMLVKEQENVKRVQLAE 404 Query: 360 TYMSQAALGDANQDAMKTGSFYG 292 Y+S+AALGDAN DAMKTGSFYG Sbjct: 405 QYLSEAALGDANSDAMKTGSFYG 427 Score = 42.0 bits (97), Expect(2) = 4e-40 Identities = 18/19 (94%), Positives = 19/19 (100%) Frame = -3 Query: 595 FPGQSIDFFGALRARVYDE 539 FPGQSIDFFGALRARVYD+ Sbjct: 327 FPGQSIDFFGALRARVYDD 345
>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 437 Score = 137 bits (344), Expect(3) = 2e-38 Identities = 62/83 (74%), Positives = 76/83 (91%) Frame = -1 Query: 540 NEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD 361 +EVRKW+ G+++IGK+LVNS++GP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLAD Sbjct: 355 DEVRKWITGVGVDSIGKKLVNSKEGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLAD 414 Query: 360 TYMSQAALGDANQDAMKTGSFYG 292 Y+S+AALGDAN DAM TG+FYG Sbjct: 415 KYLSEAALGDANSDAMNTGTFYG 437 Score = 42.0 bits (97), Expect(3) = 2e-38 Identities = 18/19 (94%), Positives = 19/19 (100%) Frame = -3 Query: 595 FPGQSIDFFGALRARVYDE 539 FPGQSIDFFGALRARVYD+ Sbjct: 337 FPGQSIDFFGALRARVYDD 355 Score = 20.8 bits (42), Expect(3) = 2e-38 Identities = 7/9 (77%), Positives = 9/9 (100%) Frame = -2 Query: 617 VVKIVDTFP 591 +VK+VDTFP Sbjct: 330 IVKLVDTFP 338
>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 433 Score = 134 bits (338), Expect(2) = 1e-37 Identities = 60/82 (73%), Positives = 76/82 (92%) Frame = -1 Query: 540 NEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD 361 +EVR+WV TG+ENI ++LVNS++GP TFEQPK+T+EKLLEYGHMLV EQ+NVKRVQLAD Sbjct: 351 DEVRRWVSETGVENIARKLVNSKEGPPTFEQPKITIEKLLEYGHMLVAEQENVKRVQLAD 410 Query: 360 TYMSQAALGDANQDAMKTGSFY 295 Y+++AALG+AN+DAMKTGSF+ Sbjct: 411 KYLNEAALGEANEDAMKTGSFF 432 Score = 42.0 bits (97), Expect(2) = 1e-37 Identities = 18/19 (94%), Positives = 19/19 (100%) Frame = -3 Query: 595 FPGQSIDFFGALRARVYDE 539 FPGQSIDFFGALRARVYD+ Sbjct: 333 FPGQSIDFFGALRARVYDD 351
>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,| chloroplast precursor (RuBisCO activase 2) (RA 2) (RubisCO activase beta form) Length = 435 Score = 130 bits (327), Expect(2) = 2e-36 Identities = 59/81 (72%), Positives = 74/81 (91%) Frame = -1 Query: 540 NEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD 361 +EVRKWV G++ IGK+LVNS++GP TFEQPKMT++KLL+YG+MLV+EQ+NVKRVQLAD Sbjct: 355 DEVRKWVSEVGVDTIGKKLVNSKEGPPTFEQPKMTIDKLLQYGNMLVEEQENVKRVQLAD 414 Query: 360 TYMSQAALGDANQDAMKTGSF 298 YMS+AALGDANQDA+K G+F Sbjct: 415 KYMSEAALGDANQDAIKRGTF 435 Score = 42.0 bits (97), Expect(2) = 2e-36 Identities = 18/19 (94%), Positives = 19/19 (100%) Frame = -3 Query: 595 FPGQSIDFFGALRARVYDE 539 FPGQSIDFFGALRARVYD+ Sbjct: 337 FPGQSIDFFGALRARVYDD 355
>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,| chloroplast precursor (RuBisCO activase 2) (RA 2) Length = 439 Score = 129 bits (324), Expect(3) = 2e-36 Identities = 62/81 (76%), Positives = 72/81 (88%) Frame = -1 Query: 540 NEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD 361 +EVRKWV TGIE IG +L+NS DGP TFEQPKMTVEKLLEYG+MLVQEQ+NVKRVQLA+ Sbjct: 359 DEVRKWVSGTGIEAIGDKLLNSFDGPPTFEQPKMTVEKLLEYGNMLVQEQENVKRVQLAE 418 Query: 360 TYMSQAALGDANQDAMKTGSF 298 TY+ +AALGDAN DA+ TG+F Sbjct: 419 TYLKEAALGDANADAINTGNF 439 Score = 42.0 bits (97), Expect(3) = 2e-36 Identities = 18/19 (94%), Positives = 19/19 (100%) Frame = -3 Query: 595 FPGQSIDFFGALRARVYDE 539 FPGQSIDFFGALRARVYD+ Sbjct: 341 FPGQSIDFFGALRARVYDD 359 Score = 21.6 bits (44), Expect(3) = 2e-36 Identities = 8/9 (88%), Positives = 9/9 (100%) Frame = -2 Query: 617 VVKIVDTFP 591 V+KIVDTFP Sbjct: 334 VIKIVDTFP 342
>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,| chloroplast precursor (RuBisCO activase 1) (RA 1) Length = 442 Score = 129 bits (324), Expect(2) = 4e-36 Identities = 61/82 (74%), Positives = 71/82 (86%) Frame = -1 Query: 540 NEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD 361 +EVRKWV TGIE IG +L+NS DGP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLAD Sbjct: 359 DEVRKWVSGTGIEKIGDKLLNSFDGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLAD 418 Query: 360 TYMSQAALGDANQDAMKTGSFY 295 Y+ +AALGDAN DA+ GSF+ Sbjct: 419 KYLKEAALGDANADAINNGSFF 440 Score = 42.0 bits (97), Expect(2) = 4e-36 Identities = 18/19 (94%), Positives = 19/19 (100%) Frame = -3 Query: 595 FPGQSIDFFGALRARVYDE 539 FPGQSIDFFGALRARVYD+ Sbjct: 341 FPGQSIDFFGALRARVYDD 359
>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 459 Score = 129 bits (323), Expect(2) = 5e-36 Identities = 61/79 (77%), Positives = 72/79 (91%) Frame = -1 Query: 540 NEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD 361 +EVRKWV TGIE IG++L+NSRDGP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLA+ Sbjct: 354 DEVRKWVSGTGIELIGEKLLNSRDGPPTFEQPKMTLEKLLEYGNMLVQEQENVKRVQLAE 413 Query: 360 TYMSQAALGDANQDAMKTG 304 TY+ +AALGDAN DA+ TG Sbjct: 414 TYLKEAALGDANADAINTG 432 Score = 42.0 bits (97), Expect(2) = 5e-36 Identities = 18/19 (94%), Positives = 19/19 (100%) Frame = -3 Query: 595 FPGQSIDFFGALRARVYDE 539 FPGQSIDFFGALRARVYD+ Sbjct: 336 FPGQSIDFFGALRARVYDD 354
>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 439 Score = 122 bits (307), Expect(2) = 4e-34 Identities = 53/82 (64%), Positives = 75/82 (91%) Frame = -1 Query: 540 NEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD 361 +EVRKW+ G++ GK+LVNS++GP TF+QPKM+++KLL+YG+MLVQEQ+NVKRVQLAD Sbjct: 357 DEVRKWISGVGVDATGKKLVNSKEGPPTFDQPKMSLDKLLQYGNMLVQEQENVKRVQLAD 416 Query: 360 TYMSQAALGDANQDAMKTGSFY 295 Y+++AALG+AN+DA+K+GSF+ Sbjct: 417 KYLNEAALGNANEDAIKSGSFF 438 Score = 42.0 bits (97), Expect(2) = 4e-34 Identities = 18/19 (94%), Positives = 19/19 (100%) Frame = -3 Query: 595 FPGQSIDFFGALRARVYDE 539 FPGQSIDFFGALRARVYD+ Sbjct: 339 FPGQSIDFFGALRARVYDD 357
>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 441 Score = 122 bits (305), Expect(2) = 3e-33 Identities = 53/82 (64%), Positives = 74/82 (90%) Frame = -1 Query: 540 NEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLAD 361 +EVRKW+ G++++GK+LVNS++GP TF+QPKMT++KLL Y MLVQEQ+NVKRVQLAD Sbjct: 359 DEVRKWISGVGVDSVGKKLVNSKEGPPTFDQPKMTLDKLLLYASMLVQEQENVKRVQLAD 418 Query: 360 TYMSQAALGDANQDAMKTGSFY 295 Y+++AALG+AN+DA+K+GSF+ Sbjct: 419 QYLNEAALGNANEDAIKSGSFF 440 Score = 39.7 bits (91), Expect(2) = 3e-33 Identities = 17/18 (94%), Positives = 18/18 (100%) Frame = -3 Query: 592 PGQSIDFFGALRARVYDE 539 PGQSIDFFGALRARVYD+ Sbjct: 342 PGQSIDFFGALRARVYDD 359
>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 408 Score = 66.6 bits (161), Expect(2) = 2e-17 Identities = 33/66 (50%), Positives = 46/66 (69%) Frame = -1 Query: 534 VRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTY 355 VR+W+ TG++ IG++LVN+R V + M + L++YG LV EQ+NVKRVQLAD Y Sbjct: 330 VRQWITDTGVDKIGQQLVNARQ-KVAMPKVSMDLNVLIKYGKSLVDEQENVKRVQLADAY 388 Query: 354 MSQAAL 337 +S A L Sbjct: 389 LSGAEL 394 Score = 42.0 bits (97), Expect(2) = 2e-17 Identities = 18/19 (94%), Positives = 19/19 (100%) Frame = -3 Query: 595 FPGQSIDFFGALRARVYDE 539 FPGQSIDFFGALRARVYD+ Sbjct: 310 FPGQSIDFFGALRARVYDD 328
>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 413 Score = 87.4 bits (215), Expect(2) = 2e-17 Identities = 39/58 (67%), Positives = 49/58 (84%) Frame = -1 Query: 540 NEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQL 367 +EVRKW G+E IG+ LVNS++ P TF+QPKMT+EKLLEYG+MLV EQ+NVKRV+L Sbjct: 352 DEVRKWAVGVGVERIGRNLVNSKESPPTFDQPKMTIEKLLEYGNMLVMEQENVKRVKL 409 Score = 42.4 bits (98), Expect = 0.001 Identities = 24/43 (55%), Positives = 29/43 (67%), Gaps = 6/43 (13%) Frame = -3 Query: 595 FPGQSIDFFGALRARVYDE------*GAQVGRLYRNREHWQEA 485 FPGQSIDFFGALRARVYD+ G V R+ RN + +E+ Sbjct: 334 FPGQSIDFFGALRARVYDDEVRKWAVGVGVERIGRNLVNSKES 376 Score = 20.8 bits (42), Expect(2) = 2e-17 Identities = 7/9 (77%), Positives = 9/9 (100%) Frame = -2 Query: 617 VVKIVDTFP 591 +VK+VDTFP Sbjct: 327 IVKLVDTFP 335
>RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase activase| (RuBisCO activase) (RA) Length = 415 Score = 52.4 bits (124), Expect(2) = 9e-12 Identities = 22/61 (36%), Positives = 37/61 (60%) Frame = -1 Query: 537 EVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADT 358 ++R ++ G EN+ R+VNS +GP F++P T+ L+E + +V EQ ++ QL D Sbjct: 229 QIRDFIHQVGYENVSLRVVNSLEGPPAFKKPDFTLSHLIESANFMVAEQKRIETSQLVDE 288 Query: 357 Y 355 Y Sbjct: 289 Y 289 Score = 37.0 bits (84), Expect(2) = 9e-12 Identities = 15/19 (78%), Positives = 17/19 (89%) Frame = -3 Query: 595 FPGQSIDFFGALRARVYDE 539 FP QSIDFF ALR+R+YDE Sbjct: 210 FPNQSIDFFSALRSRIYDE 228
>RCA_POPEU (P84562) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast (RuBisCO activase) (RA) (Fragments) Length = 32 Score = 31.2 bits (69), Expect(2) = 0.001 Identities = 13/13 (100%), Positives = 13/13 (100%) Frame = -3 Query: 595 FPGQSIDFFGALR 557 FPGQSIDFFGALR Sbjct: 5 FPGQSIDFFGALR 17 Score = 30.8 bits (68), Expect(2) = 0.001 Identities = 12/16 (75%), Positives = 14/16 (87%) Frame = -1 Query: 474 RDGPVTFEQPKMTVEK 427 R+GP TFEQP MT+EK Sbjct: 17 REGPPTFEQPAMTIEK 32
>RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase activase| (RuBisCO activase) (RA) Length = 414 Score = 34.3 bits (77), Expect = 0.32 Identities = 14/18 (77%), Positives = 16/18 (88%) Frame = -3 Query: 595 FPGQSIDFFGALRARVYD 542 FP QSIDFF ALR+R+YD Sbjct: 210 FPKQSIDFFSALRSRIYD 227
>EF1A2_XENLA (P17507) Elongation factor 1-alpha, oocyte form (EF-1-alpha-O)| (EF-1AO) (42S p48) Length = 461 Score = 31.6 bits (70), Expect = 2.1 Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 8/78 (10%) Frame = -1 Query: 462 VTFEQPKMTVE-KLLEYGHMLVQEQ-------DNVKRVQLADTYMSQAALGDANQDAMKT 307 VTF +T E K +E H +QE NVK + + D A N M+ Sbjct: 278 VTFAPSNVTTEVKSVEMHHEALQEALPGDNVGFNVKNISVKDIRRGNVAGDSKNDPPMQA 337 Query: 306 GSFYG*KILHTHPPSLAA 253 GSF I+ HP ++A Sbjct: 338 GSFTAQVIILNHPGQISA 355
>LRC24_MOUSE (Q8BHA1) Leucine-rich repeat-containing protein 24 precursor| Length = 521 Score = 30.8 bits (68), Expect = 3.5 Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 6/66 (9%) Frame = -1 Query: 597 LSQDNPLTFSVLCVLGCTTNEVR-----KWVGSTGIENIGKRLVNSRDGPVT-FEQPKMT 436 +S++ S L VL T N R W+GS I+ G+RL++SRD +T E P++ Sbjct: 193 ISKEALQPLSSLQVLRLTENPWRCDCALHWLGSW-IKEGGRRLLSSRDKKITCAEPPRLA 251 Query: 435 VEKLLE 418 ++ LLE Sbjct: 252 LQSLLE 257
>TAL_AQUAE (O66520) Probable transaldolase (EC 2.2.1.2)| Length = 217 Score = 30.0 bits (66), Expect = 6.0 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 2/59 (3%) Frame = -1 Query: 552 GCTTNEVRKWVGSTG--IENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNV 382 G TTN + TG + + K ++ DGPV+ E + E ++ G ML + +NV Sbjct: 24 GVTTNPTL--ISKTGRPFKEVVKEILELVDGPVSLETVSLDAEGMIREGRMLAELGENV 80
>GP116_HUMAN (Q8IZF2) Probable G-protein coupled receptor 116 precursor| Length = 1346 Score = 30.0 bits (66), Expect = 6.0 Identities = 14/35 (40%), Positives = 21/35 (60%) Frame = +2 Query: 359 VSASCTRLTLSCSWTSMCPYSSSFSTVIFGCSKVT 463 + +SC+R TL T CP SS +TVI+ C ++ Sbjct: 420 IDSSCSRYTLKADGTQ-CPSGSSGTTVIYTCEFIS 453
>EF1A_ONCVO (P27592) Elongation factor 1-alpha (EF-1-alpha)| Length = 464 Score = 30.0 bits (66), Expect = 6.0 Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 8/78 (10%) Frame = -1 Query: 462 VTFEQPKMTVE-KLLEYGHMLVQEQ-------DNVKRVQLADTYMSQAALGDANQDAMKT 307 VTF +T E K +E H +QE NVK + + D A N A +T Sbjct: 278 VTFAPQNLTTEVKSVEMHHEALQEALPGDNVGFNVKNISIKDIRRGSVASDSKNDPAKET 337 Query: 306 GSFYG*KILHTHPPSLAA 253 F I+ HP ++A Sbjct: 338 KMFTAQVIIMNHPGQISA 355
>ESR2_SPAAU (Q9W6M2) Estrogen receptor beta (ER-beta)| Length = 559 Score = 29.6 bits (65), Expect = 7.9 Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 6/55 (10%) Frame = +1 Query: 472 PRVHQPLANVL------DSGRADPLAHLIRRTPEHAEHRKSQWIVLGKVSTILTT 618 P VHQ L+ L G PL HL R P+H + +S W+ L + +LT+ Sbjct: 76 PSVHQTLSPSLFWPSHGHVGTTLPLHHLQAR-PQHGQAVQSPWVELSPLDNVLTS 129 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 90,488,511 Number of Sequences: 219361 Number of extensions: 1855442 Number of successful extensions: 5607 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 5396 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5605 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5938641176 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
