ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal3m04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mR... 1076 0.0
2gb|AY206372.1| Triticum aestivum ribulose-1,5-bisphosphate carbo... 858 0.0
3gb|BC029790.1| Homo sapiens, clone IMAGE:5192697, mRNA 858 0.0
4gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5... 650 0.0
5gb|AY312574.1| Deschampsia antarctica Rubisco activase beta form... 646 0.0
6gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mR... 620 e-174
7emb|AJ635203.1| Triticum durum ssp. durum partial mRNA for putat... 507 e-140
8gb|AY312573.1| Deschampsia antarctica Rubisco activase alpha for... 424 e-115
9dbj|AK104332.1| Oryza sativa (japonica cultivar-group) cDNA clon... 135 2e-28
10dbj|AK064986.1| Oryza sativa (japonica cultivar-group) cDNA clon... 135 2e-28
11dbj|AK060847.1| Oryza sativa (japonica cultivar-group) cDNA clon... 135 2e-28
12dbj|AK060841.1| Oryza sativa (japonica cultivar-group) cDNA clon... 135 2e-28
13dbj|AB034748.1| Oryza sativa OsrcaA2 mRNA for RuBisCO activase s... 135 2e-28
14gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome... 133 8e-28
15gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome... 133 8e-28
16gb|U74321.1|OSU74321 Oryza sativa ribulose-1,5-bisphosphate carb... 133 8e-28
17dbj|AB110180.1| Oryza sativa (japonica cultivar-group) mRNA for ... 133 8e-28
18dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 133 8e-28
19gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 133 8e-28
20dbj|AB034698.1| Oryza sativa OsrcaA1 mRNA for RuBisCO activase l... 133 8e-28
21gb|AF338238.1|AF338238 Zantedeschia aethiopica rubisco activase ... 125 2e-25
22gb|AF349638.1|AF349638 Oryza sativa ribulose-1,5-bisphosphate ca... 123 7e-25
23dbj|AK119513.1| Oryza sativa (japonica cultivar-group) cDNA clon... 123 7e-25
24gb|DQ359157.1| Oryza sativa (japonica cultivar-group) chloroplas... 121 3e-24
25gb|AF338237.1|AF338237 Zantedeschia aethiopica rubisco activase ... 119 1e-23
26gb|AF338240.1|AF338240 Zantedeschia aethiopica rubisco activase ... 103 7e-19
27gb|AF251264.1|AF251264 Triticum aestivum ribulose bisphosphate c... 103 7e-19
28gb|DQ023668.1| Oryza sativa (indica cultivar-group) cultivar Tet... 101 3e-18
29gb|AF338239.1|AF338239 Zantedeschia aethiopica rubisco activase ... 98 4e-17
30gb|AF305876.2| Zea mays ribulose 1,5-bisphosphate carboxylase/ox... 96 2e-16
31gb|AF084478.3| Zea mays ribulose-1,5-bisphosphate carboxylase/ox... 96 2e-16
32gb|AY110044.1| Zea mays CL1146_1 mRNA sequence 96 2e-16
33gb|M55448.1|BLYRCAB Hordeum vulgare rubisco activase (RcaB) mRNA... 82 3e-12
34emb|X60093.1|BPNIR1 B.pendula mRNA for nitrite reductase 80 1e-11
35dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 78 4e-11
36dbj|AP005592.2| Oryza sativa (japonica cultivar-group) genomic D... 78 4e-11
37gb|AF329934.1|AF329934 Gossypium hirsutum ribulose-1,5-bisphosph... 56 1e-04
38emb|Z21794.1|MDRBSCACA M.domestica ribulose-1,5-bisphosphate car... 56 1e-04
39gb|AY461703.1| Chlamydomonas reinhardtii rubisco activase (Rca) ... 48 0.036
40gb|M62962.1|CRERBCOA C.reinhardtii ribulose 1,5-bisphosphate car... 48 0.036
41gb|BT012795.1| Lycopersicon esculentum clone 113794R, mRNA sequence 46 0.14
42gb|AY312576.1| Larrea tridentata Rubisco activase beta form prec... 44 0.56
43gb|AC114810.4| Homo sapiens BAC clone RP11-1293J14 from 2, compl... 44 0.56
44emb|BX000451.4| Zebrafish DNA sequence from clone CH211-30E10, c... 44 0.56
45gb|AC138278.9| Mus musculus chromosome 8, clone RP23-378E4, comp... 42 2.2
46gb|AC139338.3| Homo sapiens 3 BAC RP11-449O23 (Roswell Park Canc... 42 2.2
47emb|AL645587.9| Mouse DNA sequence from clone RP23-171O15 on chr... 42 2.2
48gb|AC161354.2| Mus musculus chromosome 8, clone RP23-373C4, comp... 42 2.2
49dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
50gb|AF532116.1| Mus musculus strain 129/SvJ BAC clone citb585c7 f... 42 2.2
51gb|AC011308.8| Homo sapiens BAC clone RP11-522N18 from 2, comple... 42 2.2
52gb|AC144525.3| Homo sapiens BAC clone CTC-833E13 from 2, complet... 42 2.2
53emb|Y10657.1|CLRCAGENE C.littorale rca gene 42 2.2
54gb|AC007625.2|AC007625 Genomic sequence of Homo sapiens clone 23... 42 2.2
55gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 2.2
56emb|AL731748.3|CNS08C7X Oryza sativa chromosome 12, . BAC OSJNBa... 42 2.2
57gb|AC164586.7| Mus musculus chromosome 8, clone RP24-258B3, comp... 42 2.2
58gb|AC003067.59| Mus musculus Chromosome 16 BAC Clone tbx3 Synten... 40 8.7
59gb|U60105.1| Bos taurus large conductance calcium-activated pota... 40 8.7
60gb|AF414359.1|AF414356S4 Mus musculus thioredoxin reductase (Trx... 40 8.7
61gb|AY312575.1| Larrea tridentata Rubisco activase alpha form pre... 40 8.7
62gb|AC133488.30| Mus musculus strain C57BL/6J clone rp23-432e14, ... 40 8.7
63ref|XM_765396.1| Giardia lamblia ATCC 50803 heat shock protein (... 40 8.7
64ref|XM_751239.1| Ustilago maydis 521 hypothetical protein (UM001... 40 8.7
65gb|AC019210.7| Homo sapiens BAC clone RP11-449G3 from 7, complet... 40 8.7
66gb|AC011228.9| Homo sapiens BAC clone GS1-18A18 from 7, complete... 40 8.7
67gb|AC140953.1| Pan troglodytes BAC clone RP43-37K18 from 7, comp... 40 8.7
68gb|AF026000.2| Sus scrofa calcium-activated potassium channel al... 40 8.7
69emb|AL049563.4|HS68D15 Human DNA sequence from clone RP1-68D15 o... 40 8.7
70gb|AC161351.3| Mus musculus chromosome 15, clone RP24-142I15, co... 40 8.7
71emb|Z14979.1|NTRCAJQ11 N.tabacum Rca gene for ribulose bisphosph... 40 8.7
72ref|NM_174680.2| Bos taurus potassium large conductance calcium-... 40 8.7
73gb|AE011750.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 8.7
74dbj|AP007170.1| Aspergillus oryzae RIB40 genomic DNA, SC138 40 8.7
75gb|AC003066.18| Mus musculus Chromosome 16 BAC Clone tbx1 Synten... 40 8.7
76gb|AY033474.1| Bos taurus BK potassium ion channel isoform C mRN... 40 8.7
77gb|AY033473.1| Bos taurus BK potassium ion channel isoform B mRN... 40 8.7
78gb|AY033472.1| Bos taurus BK potassium ion channel isoform A mRN... 40 8.7
79emb|BX000985.18| Zebrafish DNA sequence from clone DKEY-13M3 in ... 40 8.7
80gb|AC102845.9| Mus musculus chromosome 15, clone RP24-389O7, com... 40 8.7
81gb|AC093634.3| Homo sapiens BAC clone RP11-168E14 from 4, comple... 40 8.7
82ref|NM_214219.1| Sus scrofa calcium-activated potassium channel ... 40 8.7
83ref|XM_222660.3| PREDICTED: Rattus norvegicus leiomodin 1 (smoot... 40 8.7
84gb|AC133487.14| Mus musculus strain C57BL/6J clone rp23-285e22, ... 40 8.7
85emb|BX548013.3| Mouse DNA sequence from clone RP23-452C18 on chr... 40 8.7
86gb|AC091764.35| Mus musculus strain C57BL/6J chromosome 10 clone... 40 8.7 
>gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mRNA, complete cds
          Length = 1709

 Score = 1076 bits (543), Expect = 0.0
 Identities = 598/607 (98%), Gaps = 7/607 (1%)
 Strand = Plus / Minus

                                                                        
Query: 34   tatttagagatatattaacaaaacatgcccagcaatcgcttggatgcgatgcggacttag 93
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1684 tatttagagatatattaacaaaacatgcccagcaatcgcttggatgcgatgcggacttag 1625

                                                                        
Query: 94   -gtaggtaaaacatcagatattaaaagtggcatgcttaaaaggtgtaaaggcagctgccg 152
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1624 tgtaggtaaaacatcagatattaaaagtggcatgcttaaaaggtgtaaaggcagctgccg 1565

                                                                        
Query: 153  t-cgtcgctccttgccgttgggtcgtagttcttggcattttggtcggtgcaaccttccgg 211
            | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1564 ttcgtcgctccttgccgttgggtcgtagttcttggcattttggtcggtgcaaccttccgg 1505

                                                                        
Query: 212  ca-cgggcaaagtaccttgctgtgctcctttacctcctcctatgcagcaagagatggtgg 270
            || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1504 catcgggcaaagtaccttgctgtgctcctttacctcctcctatgcagcaagagatggtgg 1445

                                                                        
Query: 271  gtgt-gtatggagaattttctaaccgtagaaggaaccagtcttcatcgcatcctggttag 329
            |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1444 gtgttgtatggagaattttctaaccgtagaaggaaccagtcttcatcgcatcctggttag 1385

                                                                        
Query: 330  catcacccagagctgcctggctcatgtaggtgtcagcaagctgcacacgcttgacattgt 389
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1384 catcacccagagctgcctggctcatgtaggtgtcagcaagctgcacacgcttgacattgt 1325

                                                                        
Query: 390  cctgctcctggacgagcatgtgcccgtactctagcagcttctcgactgtcatctttggct 449
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1324 cctgctcctggacgagcatgtgcccgtactctagcagcttctcgactgtcatctttggct 1265

                                                                        
Query: 450  gctcgaaggtcacgggcccgtcccgcgagttcaccagcctcttgccaatgttctcgattc 509
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1264 gctcgaaggtcacgggcccgtcccgcgagttcaccagcctcttgccaatgttctcgattc 1205

                                                                        
Query: 510  cggtagagccgacccacttgcgcacctcattcgtcgtacacccgagcacgcagagcaccg 569
            ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1204 cggtagagccgacccacttgcgcacctca-tcgtcgtacacccgagcacgcagagcaccg 1146

                                                                        
Query: 570  aaaaagtcaatggattgtcctgggaaaggtgtcgacgatcttgacgacagnactcgtcac 629
            |||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||
Sbjct: 1145 aaaaagtcaatggattgtcctggg-aaggtgtcgacgatctttacgacag-actcgtcac 1088

                   
Query: 630  tgacatt 636
             ||||||
Sbjct: 1087 agacatt 1081
to top
>gb|AY206372.1| Triticum aestivum ribulose-1,5-bisphosphate carboxylase activase
           precursor RNA, partial cds; nuclear gene for chloroplast
           product
          Length = 850

 Score =  858 bits (433), Expect = 0.0
 Identities = 563/600 (93%), Gaps = 10/600 (1%)
 Strand = Plus / Minus

                                                                       
Query: 43  atatattaacaaaacatgcccagcaatcgcttggatgcgatgcgg-acttaggta----- 96
           ||||||||||||||||||||||||||||||||||||||||||||| |||||||||     
Sbjct: 746 atatattaacaaaacatgcccagcaatcgcttggatgcgatgcggtacttaggtacaaag 687

                                                                       
Query: 97  ggtaaaacatcagatattaaaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgt 156
           | |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||
Sbjct: 686 gataaaacatcagatattaaat-tggcatgcttaaaaggtgtaaaggcagctgccgtcgt 628

                                                                       
Query: 157 cgctccttgccgttgggtcgtagttcttggcattttggtcggtgcaaccttccggcacgg 216
           | ||||| |||||||||||| ||||||||||| | ||||||||||| ||| |||| || |
Sbjct: 627 cactcctcgccgttgggtcgaagttcttggcagtctggtcggtgcatcctgccggtacag 568

                                                                       
Query: 217 gcaaagtaccttgctgtgctcctttacctcctcctatgcagcaagagatggtgggtgtgt 276
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 gcaaagtaccttgctgtgcccctttacctcctcctatgcagcaagagatggtgggtgtgt 508

                                                                       
Query: 277 atggagaattttctaaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacc 336
           ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 507 atggagaatgttctaaccgtagaaggtaccagtcttcatcgcatcctggttagcatcacc 448

                                                                       
Query: 337 cagagctgcctggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctc 396
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 cagagctgcctggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctc 388

                                                                       
Query: 397 ctggacgagcatgtgcccgtactctagcagcttctcgactgtcatctttggctgctcgaa 456
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct: 387 ctggacgagcatgtgcccgtactctagcagcttctccactgtcatctttggctgctcaaa 328

                                                                       
Query: 457 ggtcacgggcccgtcccgcgagttcaccagcctcttgccaatgttctcgattccggtaga 516
           |||||| || ||||||||||||||||||||| ||||||||||||||||||| ||||||||
Sbjct: 327 ggtcactggtccgtcccgcgagttcaccagcttcttgccaatgttctcgataccggtaga 268

                                                                       
Query: 517 gccgacccacttgcgcacctcattcgtcgtacacccgagcacgcagagcaccgaaaaagt 576
           |   |||||||||||||||||  |||||||||||||||||||||||||||||||||||||
Sbjct: 267 ggtcacccacttgcgcacctc-gtcgtcgtacacccgagcacgcagagcaccgaaaaagt 209

                                                                       
Query: 577 caatggattgtcctgggaaaggtgtcgacgatcttgacgacagnactcgtcactgacatt 636
           | ||||||||||||||| ||||||||||||||||||||||| | ||||||| ||||||||
Sbjct: 208 cgatggattgtcctggg-aaggtgtcgacgatcttgacgac-ggactcgtcgctgacatt 151
to top
>gb|BC029790.1| Homo sapiens, clone IMAGE:5192697, mRNA
          Length = 1643

 Score =  858 bits (433), Expect = 0.0
 Identities = 563/600 (93%), Gaps = 10/600 (1%)
 Strand = Plus / Minus

                                                                        
Query: 43   atatattaacaaaacatgcccagcaatcgcttggatgcgatgcgg-acttaggta----- 96
            ||||||||||||||||||||||||||||||||||||||||||||| |||||||||     
Sbjct: 1596 atatattaacaaaacatgcccagcaatcgcttggatgcgatgcggtacttaggtacaaag 1537

                                                                        
Query: 97   ggtaaaacatcagatattaaaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgt 156
            | |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||
Sbjct: 1536 gataaaacatcagatattaaat-tggcatgcttaaaaggtgtaaaggcagctgccgtcgt 1478

                                                                        
Query: 157  cgctccttgccgttgggtcgtagttcttggcattttggtcggtgcaaccttccggcacgg 216
            | ||||| |||||||||||| ||||||||||| | ||||||||||| ||| |||| || |
Sbjct: 1477 cactcctcgccgttgggtcgaagttcttggcagtctggtcggtgcatcctgccggtacag 1418

                                                                        
Query: 217  gcaaagtaccttgctgtgctcctttacctcctcctatgcagcaagagatggtgggtgtgt 276
            ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1417 gcaaagtaccttgctgtgcccctttacctcctcctatgcagcaagagatggtgggtgtgt 1358

                                                                        
Query: 277  atggagaattttctaaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacc 336
            ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1357 atggagaatgttctaaccgtagaaggtaccagtcttcatcgcatcctggttagcatcacc 1298

                                                                        
Query: 337  cagagctgcctggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctc 396
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1297 cagagctgcctggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctc 1238

                                                                        
Query: 397  ctggacgagcatgtgcccgtactctagcagcttctcgactgtcatctttggctgctcgaa 456
            |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct: 1237 ctggacgagcatgtgcccgtactctagcagcttctccactgtcatctttggctgctcaaa 1178

                                                                        
Query: 457  ggtcacgggcccgtcccgcgagttcaccagcctcttgccaatgttctcgattccggtaga 516
            |||||| || ||||||||||||||||||||| ||||||||||||||||||| ||||||||
Sbjct: 1177 ggtcactggtccgtcccgcgagttcaccagcttcttgccaatgttctcgataccggtaga 1118

                                                                        
Query: 517  gccgacccacttgcgcacctcattcgtcgtacacccgagcacgcagagcaccgaaaaagt 576
            |   |||||||||||||||||  |||||||||||||||||||||||||||||||||||||
Sbjct: 1117 ggtcacccacttgcgcacctc-gtcgtcgtacacccgagcacgcagagcaccgaaaaagt 1059

                                                                        
Query: 577  caatggattgtcctgggaaaggtgtcgacgatcttgacgacagnactcgtcactgacatt 636
            | ||||||||||||||| ||||||||||||||||||||||| | ||||||| ||||||||
Sbjct: 1058 cgatggattgtcctggg-aaggtgtcgacgatcttgacgac-ggactcgtcgctgacatt 1001
to top
>gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5-bisphosphate carboxylase
            activase (RcaB) gene, complete cds; and ribulose
            1,5-bisphosphate carboxylase activase  (RcaA) gene,
            alternatively spliced, complete cds
          Length = 8766

 Score =  650 bits (328), Expect = 0.0
 Identities = 335/336 (99%), Gaps = 1/336 (0%)
 Strand = Plus / Minus

                                                                        
Query: 242  acctcctcctatgcagcaagagatggtgggtgtgtatggagaattttctaaccgtagaag 301
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7355 acctcctcctatgcagcaagagatggtgggtgtgtatggagaattttctaaccgtagaag 7296

                                                                        
Query: 302  gaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatgtaggtg 361
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7295 gaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatgtaggtg 7236

                                                                        
Query: 362  tcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactct 421
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7235 tcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactct 7176

                                                                        
Query: 422  agcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtcccgcgagttc 481
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7175 agcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtcccgcgagttc 7116

                                                                        
Query: 482  accagcctcttgccaatgttctcgattccggtagagccgacccacttgcgcacctcattc 541
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 7115 accagcctcttgccaatgttctcgattccggtagagccgacccacttgcgcacctca-tc 7057

                                                
Query: 542  gtcgtacacccgagcacgcagagcaccgaaaaagtc 577
            ||||||||||||||||||||||||||||||||||||
Sbjct: 7056 gtcgtacacccgagcacgcagagcaccgaaaaagtc 7021



 Score =  452 bits (228), Expect = e-124
 Identities = 245/248 (98%), Gaps = 2/248 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    gtgtattggtctttgccaa-tgggtatact-aatatatttagagatatattaacaaaaca 58
            ||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||
Sbjct: 7770 gtgtattggtctttgccaaatgggtatacacaatatatttagagatatattaacaaaaca 7711

                                                                        
Query: 59   tgcccagcaatcgcttggatgcgatgcggacttaggtaggtaaaacatcagatattaaaa 118
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7710 tgcccagcaatcgcttggatgcgatgcggacttaggtaggtaaaacatcagatattaaaa 7651

                                                                        
Query: 119  gtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgta 178
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7650 gtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgta 7591

                                                                        
Query: 179  gttcttggcattttggtcggtgcaaccttccggcacgggcaaagtaccttgctgtgctcc 238
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7590 gttcttggcattttggtcggtgcaaccttccggcacgggcaaagtaccttgctgtgctcc 7531

                    
Query: 239  tttacctc 246
            ||||||||
Sbjct: 7530 tttacctc 7523



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 58/60 (96%), Gaps = 2/60 (3%)
 Strand = Plus / Minus

                                                                        
Query: 577  caatggattgtcctgggaaaggtgtcgacgatcttgacgacagnactcgtcactgacatt 636
            ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 6880 caatggattgtcctgggaa-ggtgtcgacgatcttgacgacag-actcgtcactgacatt 6823



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 77/89 (86%)
 Strand = Plus / Minus

                                                                        
Query: 368  agctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagc 427
            ||||||||||||||||| || |||||||||||||| |||||||| |||||||| |  |||
Sbjct: 3961 agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagc 3902

                                         
Query: 428  ttctcgactgtcatctttggctgctcgaa 456
            ||||| |  |||||||| ||||| |||||
Sbjct: 3901 ttctctatggtcatcttgggctggtcgaa 3873



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 59/67 (88%), Gaps = 1/67 (1%)
 Strand = Plus / Minus

                                                                        
Query: 517  gccgacccacttgcgcacctcattcgtcgtacacccgagcacgcagagcaccgaaaaagt 576
            |||||||||||||||||||||  |||||||||||||| || ||||| || ||||| ||||
Sbjct: 3812 gccgacccacttgcgcacctc-gtcgtcgtacacccgtgcccgcagcgcgccgaagaagt 3754

                   
Query: 577  caatgga 583
            | |||||
Sbjct: 3753 cgatgga 3747
to top
>gb|AY312574.1| Deschampsia antarctica Rubisco activase beta form precursor (RCA2)
            mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1646

 Score =  646 bits (326), Expect = 0.0
 Identities = 525/584 (89%), Gaps = 12/584 (2%)
 Strand = Plus / Minus

                                                                        
Query: 57   catgcccagcaatcgcttggatgcgatgcgga-cttaggtag-----gtaaaacatcaga 110
            ||||||||||| ||||||| |||||||||||  ||||||||      || ||||||||||
Sbjct: 1593 catgcccagcagtcgcttgtatgcgatgcggtgcttaggtacaaagagtgaaacatcaga 1534

                                                                        
Query: 111  -tattaaaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgt 169
             || | |||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 1533 ataattaaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgcggt 1474

                                                                        
Query: 170  tgggtcgtagttcttggcattttggtcggtgcaaccttccggcacgggcaaagtaccttg 229
            ||||||| ||||||||||||   ||||||| |||||||||||||| |||||||| |||||
Sbjct: 1473 tgggtcgaagttcttggcatcccggtcggtacaaccttccggcacaggcaaagtgccttg 1414

                                                                        
Query: 230  ctgtgctcctttacctcctcctatgcagcaagagatggtgggtgtgtatggagaattttc 289
             ||||||||||||||||||||||||||||||||||||||||||||  ||| ||| | |||
Sbjct: 1413 ttgtgctcctttacctcctcctatgcagcaagagatggtgggtgt--atgaagagtgttc 1356

                                                                        
Query: 290  taaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctgg 349
            |||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||
Sbjct: 1355 taaccgtagaaggaaccagtcttcatggcatccttgttcgcatcacccagagctgcctgg 1296

                                                                        
Query: 350  ctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatg 409
            |||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1295 ctcatgtaagtgtccgcaagctgcacacgcttgacattgtcctgctcctggacaagcatg 1236

                                                                        
Query: 410  tgcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccg 469
            || |||||||| |||| |||||| || |||||||| |||||||||||||| ||||| |||
Sbjct: 1235 tggccgtactccagcaacttctccaccgtcatcttgggctgctcgaaggtgacgggtccg 1176

                                                                        
Query: 470  tcccgcgagttcaccagcctcttgccaatgttctcgattccggtagagccgacccacttg 529
            |||||||||||||||||||||||||| |||||||| |||||||| ||    |||||||||
Sbjct: 1175 tcccgcgagttcaccagcctcttgccgatgttctcaattccggtggacgacacccacttg 1116

                                                                        
Query: 530  cgcacctcattcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatggattgtcc 589
            |||||||||  ||||||||||||||||||||||||||||||| ||||| ||||| |||||
Sbjct: 1115 cgcacctca-acgtcgtacacccgagcacgcagagcaccgaagaagtcgatggactgtcc 1057

                                                        
Query: 590  tgggaaaggtgtcgacgatcttgacgacagnactcgtcactgac 633
            |||| || |||||||||||||||||||||| ||||||| |||||
Sbjct: 1056 tggg-aangtgtcgacgatcttgacgacag-actcgtcgctgac 1015
to top
>gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mRNA, 3' end
          Length = 1394

 Score =  620 bits (313), Expect = e-174
 Identities = 340/345 (98%), Gaps = 3/345 (0%)
 Strand = Plus / Minus

                                                                        
Query: 292  accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 351
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1167 accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 1108

                                                                        
Query: 352  catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 411
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1107 catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 1048

                                                                        
Query: 412  cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 471
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1047 cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 988

                                                                        
Query: 472  ccgcgagttcaccagcctcttgccaatgttctcgattccggtagagccgacccacttgcg 531
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 987  ccgcgagttcaccagcctcttgccaatgttctcgattccggtagagccgacccacttgcg 928

                                                                        
Query: 532  cacctcattcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatggattgtcctg 591
            ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 927  cacctca-tcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatggattgtcctg 869

                                                         
Query: 592  ggaaaggtgtcgacgatcttgacgacagnactcgtcactgacatt 636
            || ||||||||||||||||| ||||||| ||||||||| ||||||
Sbjct: 868  gg-aaggtgtcgacgatctttacgacag-actcgtcacagacatt 826



 Score =  428 bits (216), Expect = e-117
 Identities = 226/228 (99%), Gaps = 1/228 (0%)
 Strand = Plus / Minus

                                                                        
Query: 18   aatgggtatact-aatatatttagagatatattaacaaaacatgcccagcaatcgcttgg 76
            |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1392 aatgggtatacacaatatatttagagatatattaacaaaacatgcccagcaatcgcttgg 1333

                                                                        
Query: 77   atgcgatgcggacttaggtaggtaaaacatcagatattaaaagtggcatgcttaaaaggt 136
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1332 atgcgatgcggacttaggtaggtaaaacatcagatattaaaagtggcatgcttaaaaggt 1273

                                                                        
Query: 137  gtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttggtc 196
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1272 gtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttggtc 1213

                                                            
Query: 197  ggtgcaaccttccggcacgggcaaagtaccttgctgtgctcctttacc 244
            ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1212 ggtgcaaccttccggcacgggcaaagtaccttgctgtgctcctttacc 1165
to top
>emb|AJ635203.1| Triticum durum ssp. durum partial mRNA for putative rubisco
           activase (rba1 gene)
          Length = 321

 Score =  507 bits (256), Expect = e-140
 Identities = 296/308 (96%), Gaps = 1/308 (0%)
 Strand = Plus / Minus

                                                                       
Query: 270 ggtgtgtatggagaattttctaaccgtagaaggaaccagtcttcatcgcatcctggttag 329
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 ggtgtgtatggagaatgttctaaccgtagaaggaaccagtcttcatcgcatcctggttag 249

                                                                       
Query: 330 catcacccagagctgcctggctcatgtaggtgtcagcaagctgcacacgcttgacattgt 389
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 catcacccagagctgcctggctcatgtaggtgtcagcaagctgcacacgcttgacattgt 189

                                                                       
Query: 390 cctgctcctggacgagcatgtgcccgtactctagcagcttctcgactgtcatctttggct 449
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 cctgctcctggacgagcatgtgcccgtactctagcagcttctcgactgtcatctttggct 129

                                                                       
Query: 450 gctcgaaggtcacgggcccgtcccgcgagttcaccagcctcttgccaatgttctcgattc 509
           |||| |||||||| || ||||||||||||||||| ||| ||||||||||||||||||| |
Sbjct: 128 gctcaaaggtcactggtccgtcccgcgagttcacaagcttcttgccaatgttctcgatac 69

                                                                       
Query: 510 cggtagagccgacccacttgcgcacctcattcgtcgtacacccgagcacgcagagcaccg 569
           ||||||||   |||||||||||||||||  ||||||||||||||||||||||||||||||
Sbjct: 68  cggtagaggtcacccacttgcgcacctc-gtcgtcgtacacccgagcacgcagagcaccg 10

                   
Query: 570 aaaaagtc 577
           ||||||||
Sbjct: 9   aaaaagtc 2
to top
>gb|AY312573.1| Deschampsia antarctica Rubisco activase alpha form precursor (RCA1)
            mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1616

 Score =  424 bits (214), Expect = e-115
 Identities = 313/342 (91%), Gaps = 3/342 (0%)
 Strand = Plus / Minus

                                                                        
Query: 292  accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 351
            |||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||||
Sbjct: 1363 accgtagaaggaaccagtcttcatggcatccttgttcgcatcacccagagctgcctggct 1304

                                                                        
Query: 352  catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 411
            |||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1303 catgtaagtgtccgcaagctgcacacgcttgacattgtcctgctcctggacaagcatgtg 1244

                                                                        
Query: 412  cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 471
             |||||||| |||| |||||| || |||||||| |||||||||||||| ||||| |||||
Sbjct: 1243 gccgtactccagcaacttctccaccgtcatcttgggctgctcgaaggtgacgggtccgtc 1184

                                                                        
Query: 472  ccgcgagttcaccagcctcttgccaatgttctcgattccggtagagccgacccacttgcg 531
            |||||||||||||||||||||||| |||||||| |||||||| ||    |||||||||||
Sbjct: 1183 ccgcgagttcaccagcctcttgccgatgttctcaattccggtggacgacacccacttgcg 1124

                                                                        
Query: 532  cacctcattcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatggattgtcctg 591
            ||||||  |||||||||||||||||||||||||||||||| ||||| ||||| |||||||
Sbjct: 1123 cacctc-gtcgtcgtacacccgagcacgcagagcaccgaagaagtcgatggactgtcctg 1065

                                                      
Query: 592  ggaaaggtgtcgacgatcttgacgacagnactcgtcactgac 633
            || ||||||||||||||||||||||||| ||||||| |||||
Sbjct: 1064 gg-aaggtgtcgacgatcttgacgacag-actcgtcgctgac 1025



 Score =  176 bits (89), Expect = 6e-41
 Identities = 119/129 (92%)
 Strand = Plus / Minus

                                                                        
Query: 116  aaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtc 175
            |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 1489 aaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgcggttgggtc 1430

                                                                        
Query: 176  gtagttcttggcattttggtcggtgcaaccttccggcacgggcaaagtaccttgctgtgc 235
            | ||||||||||||   ||||||| |||||||||||||| |||||||| ||||| |||||
Sbjct: 1429 gaagttcttggcatcccggtcggtacaaccttccggcacaggcaaagtgccttgttgtgc 1370

                     
Query: 236  tcctttacc 244
            |||||||||
Sbjct: 1369 tcctttacc 1361
to top
>dbj|AK104332.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-F04, full
            insert sequence
          Length = 1682

 Score =  135 bits (68), Expect = 2e-28
 Identities = 115/130 (88%), Gaps = 3/130 (2%)
 Strand = Plus / Minus

                                                                        
Query: 125  tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 184
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1514 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1455

                                                                        
Query: 185  ggcattttggtcggtgcaaccttccggcacgggcaaagtac---cttgctgtgctccttt 241
            ||||    |||||||||||||||||||||| ||||   |||   ||||||||||||||| 
Sbjct: 1454 ggcaacagggtcggtgcaaccttccggcacaggcaggttacctgcttgctgtgctccttg 1395

                      
Query: 242  acctcctcct 251
             |||||||||
Sbjct: 1394 ccctcctcct 1385



 Score =  123 bits (62), Expect = 7e-25
 Identities = 176/214 (82%)
 Strand = Plus / Minus

                                                                        
Query: 291  aaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggc 350
            ||||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| ||
Sbjct: 1310 aaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgc 1251

                                                                        
Query: 351  tcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgt 410
            ||| |||    ||||| ||||||||||||||||| || ||||||||||  || |||||||
Sbjct: 1250 tcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgt 1191

                                                                        
Query: 411  gcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgt 470
              |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || |
Sbjct: 1190 atccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccct 1131

                                              
Query: 471  cccgcgagttcaccagcctcttgccaatgttctc 504
            ||| ||||||||||||||||||||||||||||||
Sbjct: 1130 ccctcgagttcaccagcctcttgccaatgttctc 1097



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 83/96 (86%), Gaps = 2/96 (2%)
 Strand = Plus / Minus

                                                                        
Query: 521  acccacttgcgcacctcattcgtcgtacacccgagcacgcagagcaccgaaaaagtcaat 580
            ||||||||||||||||| | ||||||| || || ||||| ||||| ||||| || || ||
Sbjct: 1080 acccacttgcgcacctcgt-cgtcgtaaacacgggcacgaagagcgccgaagaaatcgat 1022

                                                
Query: 581  ggattgtcctgggaaaggtgtcgacgatcttgacga 616
            |||||| |||||||| | ||||||||||||||||||
Sbjct: 1021 ggattggcctgggaa-gctgtcgacgatcttgacga 987
to top
>dbj|AK064986.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001C24, full
            insert sequence
          Length = 1680

 Score =  135 bits (68), Expect = 2e-28
 Identities = 115/130 (88%), Gaps = 3/130 (2%)
 Strand = Plus / Minus

                                                                        
Query: 125  tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 184
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1552 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1493

                                                                        
Query: 185  ggcattttggtcggtgcaaccttccggcacgggcaaagtac---cttgctgtgctccttt 241
            ||||    |||||||||||||||||||||| ||||   |||   ||||||||||||||| 
Sbjct: 1492 ggcaacagggtcggtgcaaccttccggcacaggcaggttacctgcttgctgtgctccttg 1433

                      
Query: 242  acctcctcct 251
             |||||||||
Sbjct: 1432 ccctcctcct 1423



 Score =  123 bits (62), Expect = 7e-25
 Identities = 176/214 (82%)
 Strand = Plus / Minus

                                                                        
Query: 291  aaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggc 350
            ||||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| ||
Sbjct: 1348 aaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgc 1289

                                                                        
Query: 351  tcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgt 410
            ||| |||    ||||| ||||||||||||||||| || ||||||||||  || |||||||
Sbjct: 1288 tcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgt 1229

                                                                        
Query: 411  gcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgt 470
              |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || |
Sbjct: 1228 atccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccct 1169

                                              
Query: 471  cccgcgagttcaccagcctcttgccaatgttctc 504
            ||| ||||||||||||||||||||||||||||||
Sbjct: 1168 ccctcgagttcaccagcctcttgccaatgttctc 1135



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 83/96 (86%), Gaps = 2/96 (2%)
 Strand = Plus / Minus

                                                                        
Query: 521  acccacttgcgcacctcattcgtcgtacacccgagcacgcagagcaccgaaaaagtcaat 580
            ||||||||||||||||| | ||||||| || || ||||| ||||| ||||| || || ||
Sbjct: 1118 acccacttgcgcacctcgt-cgtcgtaaacacgggcacgaagagcgccgaagaaatcgat 1060

                                                
Query: 581  ggattgtcctgggaaaggtgtcgacgatcttgacga 616
            |||||| |||||||| | ||||||||||||||||||
Sbjct: 1059 ggattggcctgggaa-gctgtcgacgatcttgacga 1025
to top
>dbj|AK060847.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E04, full
            insert sequence
          Length = 1691

 Score =  135 bits (68), Expect = 2e-28
 Identities = 115/130 (88%), Gaps = 3/130 (2%)
 Strand = Plus / Minus

                                                                        
Query: 125  tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 184
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1551 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1492

                                                                        
Query: 185  ggcattttggtcggtgcaaccttccggcacgggcaaagtac---cttgctgtgctccttt 241
            ||||    |||||||||||||||||||||| ||||   |||   ||||||||||||||| 
Sbjct: 1491 ggcaacagggtcggtgcaaccttccggcacaggcaggttacctgcttgctgtgctccttg 1432

                      
Query: 242  acctcctcct 251
             |||||||||
Sbjct: 1431 ccctcctcct 1422



 Score =  123 bits (62), Expect = 7e-25
 Identities = 176/214 (82%)
 Strand = Plus / Minus

                                                                        
Query: 291  aaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggc 350
            ||||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| ||
Sbjct: 1347 aaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgc 1288

                                                                        
Query: 351  tcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgt 410
            ||| |||    ||||| ||||||||||||||||| || ||||||||||  || |||||||
Sbjct: 1287 tcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgt 1228

                                                                        
Query: 411  gcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgt 470
              |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || |
Sbjct: 1227 atccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccct 1168

                                              
Query: 471  cccgcgagttcaccagcctcttgccaatgttctc 504
            ||| ||||||||||||||||||||||||||||||
Sbjct: 1167 ccctcgagttcaccagcctcttgccaatgttctc 1134



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 83/96 (86%), Gaps = 2/96 (2%)
 Strand = Plus / Minus

                                                                        
Query: 521  acccacttgcgcacctcattcgtcgtacacccgagcacgcagagcaccgaaaaagtcaat 580
            ||||||||||||||||| | ||||||| || || ||||| ||||| ||||| || || ||
Sbjct: 1117 acccacttgcgcacctcgt-cgtcgtaaacacgggcacgaagagcgccgaagaaatcgat 1059

                                                
Query: 581  ggattgtcctgggaaaggtgtcgacgatcttgacga 616
            |||||| |||||||| | ||||||||||||||||||
Sbjct: 1058 ggattggcctgggaa-gctgtcgacgatcttgacga 1024
to top
>dbj|AK060841.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D05, full
            insert sequence
          Length = 1470

 Score =  135 bits (68), Expect = 2e-28
 Identities = 115/130 (88%), Gaps = 3/130 (2%)
 Strand = Plus / Minus

                                                                        
Query: 125  tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 184
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1335 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1276

                                                                        
Query: 185  ggcattttggtcggtgcaaccttccggcacgggcaaagtac---cttgctgtgctccttt 241
            ||||    |||||||||||||||||||||| ||||   |||   ||||||||||||||| 
Sbjct: 1275 ggcaacagggtcggtgcaaccttccggcacaggcaggttacctgcttgctgtgctccttg 1216

                      
Query: 242  acctcctcct 251
             |||||||||
Sbjct: 1215 ccctcctcct 1206



 Score =  123 bits (62), Expect = 7e-25
 Identities = 176/214 (82%)
 Strand = Plus / Minus

                                                                        
Query: 291  aaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggc 350
            ||||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| ||
Sbjct: 1131 aaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgc 1072

                                                                        
Query: 351  tcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgt 410
            ||| |||    ||||| ||||||||||||||||| || ||||||||||  || |||||||
Sbjct: 1071 tcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgt 1012

                                                                        
Query: 411  gcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgt 470
              |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || |
Sbjct: 1011 atccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccct 952

                                              
Query: 471  cccgcgagttcaccagcctcttgccaatgttctc 504
            ||| ||||||||||||||||||||||||||||||
Sbjct: 951  ccctcgagttcaccagcctcttgccaatgttctc 918



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 83/96 (86%), Gaps = 2/96 (2%)
 Strand = Plus / Minus

                                                                       
Query: 521 acccacttgcgcacctcattcgtcgtacacccgagcacgcagagcaccgaaaaagtcaat 580
           ||||||||||||||||| | ||||||| || || ||||| ||||| ||||| || || ||
Sbjct: 901 acccacttgcgcacctcgt-cgtcgtaaacacgggcacgaagagcgccgaagaaatcgat 843

                                               
Query: 581 ggattgtcctgggaaaggtgtcgacgatcttgacga 616
           |||||| |||||||| | ||||||||||||||||||
Sbjct: 842 ggattggcctgggaa-gctgtcgacgatcttgacga 808
to top
>dbj|AB034748.1| Oryza sativa OsrcaA2 mRNA for RuBisCO activase small isoform
            precursor, complete cds
          Length = 1706

 Score =  135 bits (68), Expect = 2e-28
 Identities = 115/130 (88%), Gaps = 3/130 (2%)
 Strand = Plus / Minus

                                                                        
Query: 125  tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 184
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1556 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1497

                                                                        
Query: 185  ggcattttggtcggtgcaaccttccggcacgggcaaagtac---cttgctgtgctccttt 241
            ||||    |||||||||||||||||||||| ||||   |||   ||||||||||||||| 
Sbjct: 1496 ggcaacagggtcggtgcaaccttccggcacaggcaggttacctgcttgctgtgctccttg 1437

                      
Query: 242  acctcctcct 251
             |||||||||
Sbjct: 1436 ccctcctcct 1427



 Score =  123 bits (62), Expect = 7e-25
 Identities = 176/214 (82%)
 Strand = Plus / Minus

                                                                        
Query: 291  aaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggc 350
            ||||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| ||
Sbjct: 1352 aaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgc 1293

                                                                        
Query: 351  tcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgt 410
            ||| |||    ||||| ||||||||||||||||| || ||||||||||  || |||||||
Sbjct: 1292 tcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgt 1233

                                                                        
Query: 411  gcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgt 470
              |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || |
Sbjct: 1232 atccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccct 1173

                                              
Query: 471  cccgcgagttcaccagcctcttgccaatgttctc 504
            ||| ||||||||||||||||||||||||||||||
Sbjct: 1172 ccctcgagttcaccagcctcttgccaatgttctc 1139



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 83/96 (86%), Gaps = 2/96 (2%)
 Strand = Plus / Minus

                                                                        
Query: 521  acccacttgcgcacctcattcgtcgtacacccgagcacgcagagcaccgaaaaagtcaat 580
            ||||||||||||||||| | ||||||| || || ||||| ||||| ||||| || || ||
Sbjct: 1122 acccacttgcgcacctcgt-cgtcgtaaacacgggcacgaagagcgccgaagaaatcgat 1064

                                                
Query: 581  ggattgtcctgggaaaggtgtcgacgatcttgacga 616
            |||||| |||||||| | ||||||||||||||||||
Sbjct: 1063 ggattggcctgggaa-gctgtcgacgatcttgacga 1029
to top
>gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0003C04
              map S10003, complete sequence
          Length = 119238

 Score =  133 bits (67), Expect = 8e-28
 Identities = 88/95 (92%)
 Strand = Plus / Plus

                                                                          
Query: 125    tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 184
              ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 107158 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 107217

                                                 
Query: 185    ggcattttggtcggtgcaaccttccggcacgggca 219
              ||||    |||||||||||||||||||||| ||||
Sbjct: 107218 ggcaacagggtcggtgcaaccttccggcacaggca 107252



 Score =  129 bits (65), Expect = 1e-26
 Identities = 179/217 (82%)
 Strand = Plus / Plus

                                                                          
Query: 288    tctaaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcct 347
              |||||||||||||||||||||||||||| || ||   |||||| ||||| ||||| ||||
Sbjct: 108306 tctaaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcct 108365

                                                                          
Query: 348    ggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagca 407
               ||||| |||    ||||| ||||||||||||||||| || ||||||||||  || ||||
Sbjct: 108366 cgctcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagca 108425

                                                                          
Query: 408    tgtgcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcc 467
              |||  |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || |
Sbjct: 108426 tgtatccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggc 108485

                                                   
Query: 468    cgtcccgcgagttcaccagcctcttgccaatgttctc 504
              | |||| ||||||||||||||||||||||||||||||
Sbjct: 108486 cctccctcgagttcaccagcctcttgccaatgttctc 108522



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 63/75 (84%)
 Strand = Plus / Plus

                                                                          
Query: 143    gcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttggtcggtgca 202
              ||||||||||||||||||||| || || |||||||||||   |||   ||||||||||||
Sbjct: 112053 gcagctgccgtcgtcgctcctggcggtagggtcgtagttggcggcgcgttggtcggtgca 112112

                             
Query: 203    accttccggcacggg 217
               ||  ||||||||||
Sbjct: 112113 tcccgccggcacggg 112127



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 35/38 (92%), Gaps = 1/38 (2%)
 Strand = Plus / Plus

                                                    
Query: 579    atggattgtcctgggaaaggtgtcgacgatcttgacga 616
              |||||||| |||||||| | ||||||||||||||||||
Sbjct: 108688 atggattggcctgggaa-gctgtcgacgatcttgacga 108724



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 476    gagttcaccagcctcttgccaatgttctc 504
              ||||||||||||||| |||| ||||||||
Sbjct: 112324 gagttcaccagcctcctgccgatgttctc 112352
to top
>gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0026K20 map S10559, complete sequence
          Length = 115996

 Score =  133 bits (67), Expect = 8e-28
 Identities = 88/95 (92%)
 Strand = Plus / Plus

                                                                         
Query: 125   tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 184
             ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 29039 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 29098

                                                
Query: 185   ggcattttggtcggtgcaaccttccggcacgggca 219
             ||||    |||||||||||||||||||||| ||||
Sbjct: 29099 ggcaacagggtcggtgcaaccttccggcacaggca 29133



 Score =  129 bits (65), Expect = 1e-26
 Identities = 179/217 (82%)
 Strand = Plus / Plus

                                                                         
Query: 288   tctaaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcct 347
             |||||||||||||||||||||||||||| || ||   |||||| ||||| ||||| ||||
Sbjct: 30183 tctaaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcct 30242

                                                                         
Query: 348   ggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagca 407
              ||||| |||    ||||| ||||||||||||||||| || ||||||||||  || ||||
Sbjct: 30243 cgctcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagca 30302

                                                                         
Query: 408   tgtgcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcc 467
             |||  |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || |
Sbjct: 30303 tgtatccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggc 30362

                                                  
Query: 468   cgtcccgcgagttcaccagcctcttgccaatgttctc 504
             | |||| ||||||||||||||||||||||||||||||
Sbjct: 30363 cctccctcgagttcaccagcctcttgccaatgttctc 30399



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 63/75 (84%)
 Strand = Plus / Plus

                                                                         
Query: 143   gcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttggtcggtgca 202
             ||||||||||||||||||||| || || |||||||||||   |||   ||||||||||||
Sbjct: 33930 gcagctgccgtcgtcgctcctggcggtagggtcgtagttggcggcgcgttggtcggtgca 33989

                            
Query: 203   accttccggcacggg 217
              ||  ||||||||||
Sbjct: 33990 tcccgccggcacggg 34004



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 35/38 (92%), Gaps = 1/38 (2%)
 Strand = Plus / Plus

                                                   
Query: 579   atggattgtcctgggaaaggtgtcgacgatcttgacga 616
             |||||||| |||||||| | ||||||||||||||||||
Sbjct: 30565 atggattggcctgggaa-gctgtcgacgatcttgacga 30601



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 476   gagttcaccagcctcttgccaatgttctc 504
             ||||||||||||||| |||| ||||||||
Sbjct: 34201 gagttcaccagcctcctgccgatgttctc 34229
to top
>gb|U74321.1|OSU74321 Oryza sativa ribulose-1,5-bisphosphate carboxylase/oxygenase activase
            (rca) mRNA, complete cds
          Length = 1675

 Score =  133 bits (67), Expect = 8e-28
 Identities = 88/95 (92%)
 Strand = Plus / Minus

                                                                        
Query: 125  tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 184
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1520 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1461

                                               
Query: 185  ggcattttggtcggtgcaaccttccggcacgggca 219
            ||||    |||||||||||||||||||||| ||||
Sbjct: 1460 ggcaacagggtcggtgcaaccttccggcacaggca 1426



 Score =  123 bits (62), Expect = 7e-25
 Identities = 176/214 (82%)
 Strand = Plus / Minus

                                                                        
Query: 291  aaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggc 350
            ||||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| ||
Sbjct: 1316 aaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgc 1257

                                                                        
Query: 351  tcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgt 410
            ||| |||    ||||| ||||||||||||||||| || ||||||||||  || |||||||
Sbjct: 1256 tcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgt 1197

                                                                        
Query: 411  gcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgt 470
              |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || |
Sbjct: 1196 atccgtactcgatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccct 1137

                                              
Query: 471  cccgcgagttcaccagcctcttgccaatgttctc 504
            ||| ||||||||||||||||||||||||||||||
Sbjct: 1136 ccctcgagttcaccagcctcttgccaatgttctc 1103



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 83/96 (86%), Gaps = 2/96 (2%)
 Strand = Plus / Minus

                                                                        
Query: 521  acccacttgcgcacctcattcgtcgtacacccgagcacgcagagcaccgaaaaagtcaat 580
            ||||||||||||||||| | ||||||| || || ||||| ||||| ||||| || || ||
Sbjct: 1086 acccacttgcgcacctcgt-cgtcgtaaacacgggcacgaagagcgccgaagaaatcgat 1028

                                                
Query: 581  ggattgtcctgggaaaggtgtcgacgatcttgacga 616
            |||||| |||||||| | ||||||||||||||||||
Sbjct: 1027 ggattggcctgggaa-gctgtcgacgatcttgacga 993
to top
>dbj|AB110180.1| Oryza sativa (japonica cultivar-group) mRNA for ribulose-bisphosphate
            carboxylase activase large isoform precursor protein,
            complete cds, clone: 13YPR038
          Length = 1558

 Score =  133 bits (67), Expect = 8e-28
 Identities = 88/95 (92%)
 Strand = Plus / Minus

                                                                        
Query: 125  tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 184
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1430 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1371

                                               
Query: 185  ggcattttggtcggtgcaaccttccggcacgggca 219
            ||||    |||||||||||||||||||||| ||||
Sbjct: 1370 ggcaacagggtcggtgcaaccttccggcacaggca 1336



 Score =  119 bits (60), Expect = 1e-23
 Identities = 174/212 (82%)
 Strand = Plus / Minus

                                                                        
Query: 293  ccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctc 352
            ||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| ||||
Sbjct: 1309 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 1250

                                                                        
Query: 353  atgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgc 412
            | |||    ||||| ||||||||||||||||| || ||||||||||  || |||||||  
Sbjct: 1249 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 1190

                                                                        
Query: 413  ccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtcc 472
            |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || |||
Sbjct: 1189 ccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctcc 1130

                                            
Query: 473  cgcgagttcaccagcctcttgccaatgttctc 504
            | ||||||||||||||||||||||||||||||
Sbjct: 1129 ctcgagttcaccagcctcttgccaatgttctc 1098



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 83/96 (86%), Gaps = 2/96 (2%)
 Strand = Plus / Minus

                                                                        
Query: 521  acccacttgcgcacctcattcgtcgtacacccgagcacgcagagcaccgaaaaagtcaat 580
            ||||||||||||||||| | ||||||| || || ||||| ||||| ||||| || || ||
Sbjct: 1081 acccacttgcgcacctcgt-cgtcgtaaacacgggcacgaagagcgccgaagaaatcgat 1023

                                                
Query: 581  ggattgtcctgggaaaggtgtcgacgatcttgacga 616
            |||||| |||||||| | ||||||||||||||||||
Sbjct: 1022 ggattggcctgggaa-gctgtcgacgatcttgacga 988
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  133 bits (67), Expect = 8e-28
 Identities = 88/95 (92%)
 Strand = Plus / Plus

                                                                            
Query: 125      tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 184
                ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 28302301 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 28302360

                                                   
Query: 185      ggcattttggtcggtgcaaccttccggcacgggca 219
                ||||    |||||||||||||||||||||| ||||
Sbjct: 28302361 ggcaacagggtcggtgcaaccttccggcacaggca 28302395



 Score =  129 bits (65), Expect = 1e-26
 Identities = 179/217 (82%)
 Strand = Plus / Plus

                                                                            
Query: 288      tctaaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcct 347
                |||||||||||||||||||||||||||| || ||   |||||| ||||| ||||| ||||
Sbjct: 28303445 tctaaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcct 28303504

                                                                            
Query: 348      ggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagca 407
                 ||||| |||    ||||| ||||||||||||||||| || ||||||||||  || ||||
Sbjct: 28303505 cgctcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagca 28303564

                                                                            
Query: 408      tgtgcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcc 467
                |||  |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || |
Sbjct: 28303565 tgtatccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggc 28303624

                                                     
Query: 468      cgtcccgcgagttcaccagcctcttgccaatgttctc 504
                | |||| ||||||||||||||||||||||||||||||
Sbjct: 28303625 cctccctcgagttcaccagcctcttgccaatgttctc 28303661



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 63/75 (84%)
 Strand = Plus / Plus

                                                                            
Query: 143      gcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttggtcggtgca 202
                ||||||||||||||||||||| || || |||||||||||   |||   ||||||||||||
Sbjct: 28307192 gcagctgccgtcgtcgctcctggcggtagggtcgtagttggcggcgcgttggtcggtgca 28307251

                               
Query: 203      accttccggcacggg 217
                 ||  ||||||||||
Sbjct: 28307252 tcccgccggcacggg 28307266



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 35/38 (92%), Gaps = 1/38 (2%)
 Strand = Plus / Plus

                                                      
Query: 579      atggattgtcctgggaaaggtgtcgacgatcttgacga 616
                |||||||| |||||||| | ||||||||||||||||||
Sbjct: 28303827 atggattggcctgggaa-gctgtcgacgatcttgacga 28303863



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 476      gagttcaccagcctcttgccaatgttctc 504
                ||||||||||||||| |||| ||||||||
Sbjct: 28307463 gagttcaccagcctcctgccgatgttctc 28307491
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  133 bits (67), Expect = 8e-28
 Identities = 88/95 (92%)
 Strand = Plus / Plus

                                                                            
Query: 125      tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 184
                ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 28284750 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 28284809

                                                   
Query: 185      ggcattttggtcggtgcaaccttccggcacgggca 219
                ||||    |||||||||||||||||||||| ||||
Sbjct: 28284810 ggcaacagggtcggtgcaaccttccggcacaggca 28284844



 Score =  129 bits (65), Expect = 1e-26
 Identities = 179/217 (82%)
 Strand = Plus / Plus

                                                                            
Query: 288      tctaaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcct 347
                |||||||||||||||||||||||||||| || ||   |||||| ||||| ||||| ||||
Sbjct: 28285894 tctaaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcct 28285953

                                                                            
Query: 348      ggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagca 407
                 ||||| |||    ||||| ||||||||||||||||| || ||||||||||  || ||||
Sbjct: 28285954 cgctcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagca 28286013

                                                                            
Query: 408      tgtgcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcc 467
                |||  |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || |
Sbjct: 28286014 tgtatccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggc 28286073

                                                     
Query: 468      cgtcccgcgagttcaccagcctcttgccaatgttctc 504
                | |||| ||||||||||||||||||||||||||||||
Sbjct: 28286074 cctccctcgagttcaccagcctcttgccaatgttctc 28286110



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 63/75 (84%)
 Strand = Plus / Plus

                                                                            
Query: 143      gcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttggtcggtgca 202
                ||||||||||||||||||||| || || |||||||||||   |||   ||||||||||||
Sbjct: 28289641 gcagctgccgtcgtcgctcctggcggtagggtcgtagttggcggcgcgttggtcggtgca 28289700

                               
Query: 203      accttccggcacggg 217
                 ||  ||||||||||
Sbjct: 28289701 tcccgccggcacggg 28289715



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 35/38 (92%), Gaps = 1/38 (2%)
 Strand = Plus / Plus

                                                      
Query: 579      atggattgtcctgggaaaggtgtcgacgatcttgacga 616
                |||||||| |||||||| | ||||||||||||||||||
Sbjct: 28286276 atggattggcctgggaa-gctgtcgacgatcttgacga 28286312



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 476      gagttcaccagcctcttgccaatgttctc 504
                ||||||||||||||| |||| ||||||||
Sbjct: 28289912 gagttcaccagcctcctgccgatgttctc 28289940
to top
>dbj|AB034698.1| Oryza sativa OsrcaA1 mRNA for RuBisCO activase large isoform
            precursor, complete cds
          Length = 1623

 Score =  133 bits (67), Expect = 8e-28
 Identities = 88/95 (92%)
 Strand = Plus / Minus

                                                                        
Query: 125  tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 184
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1465 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1406

                                               
Query: 185  ggcattttggtcggtgcaaccttccggcacgggca 219
            ||||    |||||||||||||||||||||| ||||
Sbjct: 1405 ggcaacagggtcggtgcaaccttccggcacaggca 1371



 Score =  119 bits (60), Expect = 1e-23
 Identities = 174/212 (82%)
 Strand = Plus / Minus

                                                                        
Query: 293  ccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctc 352
            ||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| ||||
Sbjct: 1344 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 1285

                                                                        
Query: 353  atgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgc 412
            | |||    ||||| ||||||||||||||||| || ||||||||||  || |||||||  
Sbjct: 1284 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 1225

                                                                        
Query: 413  ccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtcc 472
            |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || |||
Sbjct: 1224 ccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctcc 1165

                                            
Query: 473  cgcgagttcaccagcctcttgccaatgttctc 504
            | ||||||||||||||||||||||||||||||
Sbjct: 1164 ctcgagttcaccagcctcttgccaatgttctc 1133



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 83/96 (86%), Gaps = 2/96 (2%)
 Strand = Plus / Minus

                                                                        
Query: 521  acccacttgcgcacctcattcgtcgtacacccgagcacgcagagcaccgaaaaagtcaat 580
            ||||||||||||||||| | ||||||| || || ||||| ||||| ||||| || || ||
Sbjct: 1116 acccacttgcgcacctcgt-cgtcgtaaacacgggcacgaagagcgccgaagaaatcgat 1058

                                                
Query: 581  ggattgtcctgggaaaggtgtcgacgatcttgacga 616
            |||||| |||||||| | ||||||||||||||||||
Sbjct: 1057 ggattggcctgggaa-gctgtcgacgatcttgacga 1023
to top
>gb|AF338238.1|AF338238 Zantedeschia aethiopica rubisco activase (rca2) mRNA, partial cds
          Length = 1436

 Score =  125 bits (63), Expect = 2e-25
 Identities = 171/207 (82%)
 Strand = Plus / Minus

                                                                        
Query: 289  ctaaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctg 348
            |||||| |||||||| |||||||| ||||| ||||| || || ||||| |||||||||| 
Sbjct: 1007 ctaaccatagaaggatccagtcttgatcgcgtcctgattggcgtcaccaagagctgcctc 948

                                                                        
Query: 349  gctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcat 408
            ||||| |||  |||| || |||||||| | ||| || || ||||||||||| || |||||
Sbjct: 947  gctcaggtacttgtcggccagctgcaccctcttcacgttctcctgctcctgcaccagcat 888

                                                                        
Query: 409  gtgcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggccc 468
            ||  |||||||| |||||||| || |  |||||||| |||||| |||| |||   |||||
Sbjct: 887  gttgccgtactccagcagcttgtccagggtcatcttgggctgcgcgaacgtcggcggccc 828

                                       
Query: 469  gtcccgcgagttcaccagcctcttgcc 495
             ||| ||||||||||||||||||||||
Sbjct: 827  ctccagcgagttcaccagcctcttgcc 801



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 64/74 (86%)
 Strand = Plus / Minus

                                                                        
Query: 135  gtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttgg 194
            ||||| ||||||||||| ||||||||||| ||||| |||||| ||||  |||||||  ||
Sbjct: 1149 gtgtacaggcagctgccatcgtcgctcctggccgtcgggtcgaagttggtggcattccgg 1090

                          
Query: 195  tcggtgcaaccttc 208
            ||||| ||||||||
Sbjct: 1089 tcggtacaaccttc 1076



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 49/55 (89%), Gaps = 1/55 (1%)
 Strand = Plus / Minus

                                                                  
Query: 564 gcaccgaaaaagtcaatggattgtcctgggaaaggtgtcgacgatcttgacgaca 618
           |||||||| |||||||||||||| || ||| ||||||||||||| ||||| ||||
Sbjct: 733 gcaccgaagaagtcaatggattggcc-ggggaaggtgtcgacgagcttgatgaca 680
to top
>gb|AF349638.1|AF349638 Oryza sativa ribulose-1,5-bisphosphate carboxylase activase mRNA,
           partial cds; nuclear gene for chloroplast product
          Length = 651

 Score =  123 bits (62), Expect = 7e-25
 Identities = 176/214 (82%)
 Strand = Plus / Minus

                                                                       
Query: 291 aaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggc 350
           ||||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| ||
Sbjct: 565 aaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgc 506

                                                                       
Query: 351 tcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgt 410
           ||| |||    ||||| ||||||||||||||||| || ||||||||||  || |||||||
Sbjct: 505 tcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgt 446

                                                                       
Query: 411 gcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgt 470
             |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || |
Sbjct: 445 atccgtactcgatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccct 386

                                             
Query: 471 cccgcgagttcaccagcctcttgccaatgttctc 504
           ||| ||||||||||||||||||||||||||||||
Sbjct: 385 ccctcgagttcaccagcctcttgccaatgttctc 352



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 83/96 (86%), Gaps = 2/96 (2%)
 Strand = Plus / Minus

                                                                       
Query: 521 acccacttgcgcacctcattcgtcgtacacccgagcacgcagagcaccgaaaaagtcaat 580
           ||||||||||||||||| | ||||||| || || ||||| ||||| ||||| || || ||
Sbjct: 335 acccacttgcgcacctcgt-cgtcgtaaacacgggcacgaagagcgccgaagaaatcgat 277

                                               
Query: 581 ggattgtcctgggaaaggtgtcgacgatcttgacga 616
           |||||| |||||||| | ||||||||||||||||||
Sbjct: 276 ggattggcctgggaa-gctgtcgacgatcttgacga 242
to top
>dbj|AK119513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-F01, full
            insert sequence
          Length = 1721

 Score =  123 bits (62), Expect = 7e-25
 Identities = 176/214 (82%)
 Strand = Plus / Minus

                                                                        
Query: 291  aaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggc 350
            ||||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| ||
Sbjct: 1359 aaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgc 1300

                                                                        
Query: 351  tcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgt 410
            ||| |||    ||||| ||||||||||||||||| || ||||||||||  || |||||||
Sbjct: 1299 tcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgt 1240

                                                                        
Query: 411  gcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgt 470
              |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || |
Sbjct: 1239 atccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccct 1180

                                              
Query: 471  cccgcgagttcaccagcctcttgccaatgttctc 504
            ||| ||||||||||||||||||||||||||||||
Sbjct: 1179 ccctcgagttcaccagcctcttgccaatgttctc 1146



 Score =  119 bits (60), Expect = 1e-23
 Identities = 114/130 (87%), Gaps = 4/130 (3%)
 Strand = Plus / Minus

                                                                        
Query: 125  tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 184
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||
Sbjct: 1562 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcg-aattctt 1504

                                                                        
Query: 185  ggcattttggtcggtgcaaccttccggcacgggcaaagtac---cttgctgtgctccttt 241
            ||||    |||||||||||||||||||||| ||||   |||   ||||||||||||||| 
Sbjct: 1503 ggcaacagggtcggtgcaaccttccggcacaggcaggttacctgcttgctgtgctccttg 1444

                      
Query: 242  acctcctcct 251
             |||||||||
Sbjct: 1443 ccctcctcct 1434



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 83/96 (86%), Gaps = 2/96 (2%)
 Strand = Plus / Minus

                                                                        
Query: 521  acccacttgcgcacctcattcgtcgtacacccgagcacgcagagcaccgaaaaagtcaat 580
            ||||||||||||||||| | ||||||| || || ||||| ||||| ||||| || || ||
Sbjct: 1129 acccacttgcgcacctcgt-cgtcgtaaacacgggcacgaagagcgccgaagaaatcgat 1071

                                                
Query: 581  ggattgtcctgggaaaggtgtcgacgatcttgacga 616
            |||||| |||||||| | ||||||||||||||||||
Sbjct: 1070 ggattggcctgggaa-gctgtcgacgatcttgacga 1036
to top
>gb|DQ359157.1| Oryza sativa (japonica cultivar-group) chloroplast RuBisCO small
           isoform precursor, mRNA, partial cds; nuclear gene for
           chloroplast product
          Length = 93

 Score =  121 bits (61), Expect = 3e-24
 Identities = 82/89 (92%)
 Strand = Plus / Minus

                                                                       
Query: 131 aaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcatt 190
           ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||  
Sbjct: 93  aaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttcttggcaac 34

                                        
Query: 191 ttggtcggtgcaaccttccggcacgggca 219
             |||||||||||||||||||||| ||||
Sbjct: 33  agggtcggtgcaaccttccggcacaggca 5
to top
>gb|AF338237.1|AF338237 Zantedeschia aethiopica rubisco activase (rca1) mRNA, partial cds
          Length = 1597

 Score =  119 bits (60), Expect = 1e-23
 Identities = 165/200 (82%)
 Strand = Plus / Minus

                                                                        
Query: 296  tagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatg 355
            |||||||| |||||||| ||||| ||||| || || ||||| |||||||||| ||||| |
Sbjct: 1194 tagaaggatccagtcttgatcgcgtcctgattggcgtcaccaagagctgcctcgctcagg 1135

                                                                        
Query: 356  taggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccg 415
            ||  |||| || |||||||| | ||| || || ||||||||||| || |||||||  |||
Sbjct: 1134 tacttgtcggccagctgcaccctcttcacgttctcctgctcctgcaccagcatgttgccg 1075

                                                                        
Query: 416  tactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtcccgc 475
            ||||| |||||||| || |  |||||||| |||||| |||| |||   ||||| ||| ||
Sbjct: 1074 tactccagcagcttgtccagggtcatcttgggctgcgcgaacgtcggcggcccctccagc 1015

                                
Query: 476  gagttcaccagcctcttgcc 495
            ||||||||||||||||||||
Sbjct: 1014 gagttcaccagcctcttgcc 995



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 64/74 (86%)
 Strand = Plus / Minus

                                                                        
Query: 135  gtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttgg 194
            ||||| ||||||||||| ||||||||||| ||||| |||||| ||||  |||||||  ||
Sbjct: 1305 gtgtacaggcagctgccatcgtcgctcctggccgtcgggtcgaagttggtggcattccgg 1246

                          
Query: 195  tcggtgcaaccttc 208
            ||||| ||||||||
Sbjct: 1245 tcggtacaaccttc 1232



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 49/55 (89%), Gaps = 1/55 (1%)
 Strand = Plus / Minus

                                                                  
Query: 564 gcaccgaaaaagtcaatggattgtcctgggaaaggtgtcgacgatcttgacgaca 618
           |||||||| |||||||||||||| || ||| ||||||||||||| ||||| ||||
Sbjct: 927 gcaccgaagaagtcaatggattggcc-ggggaaggtgtcgacgagcttgatgaca 874
to top
>gb|AF338240.1|AF338240 Zantedeschia aethiopica rubisco activase (rca4) mRNA, partial cds
          Length = 1674

 Score =  103 bits (52), Expect = 7e-19
 Identities = 166/204 (81%)
 Strand = Plus / Minus

                                                                        
Query: 289  ctaaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctg 348
            |||||| |||||||| |||||||| ||||| ||||| || || ||||| |||||||||| 
Sbjct: 1308 ctaaccatagaaggatccagtcttgatcgcgtcctgattggcgtcaccaagagctgcctc 1249

                                                                        
Query: 349  gctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcat 408
            ||||| |||  |||| || |||||||| | ||| || || ||||| ||||| || |||||
Sbjct: 1248 gctcaggtacttgtcggccagctgcaccctcttcacgttctcctgttcctgcaccagcat 1189

                                                                        
Query: 409  gtgcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggccc 468
             |  |||||||| |||||||| || |  |||||||| |||||| |||| |||   |||||
Sbjct: 1188 attgccgtactccagcagcttgtccagggtcatcttgggctgcgcgaacgtcggcggccc 1129

                                    
Query: 469  gtcccgcgagttcaccagcctctt 492
             ||| |||||||||||||||||||
Sbjct: 1128 ctccagcgagttcaccagcctctt 1105



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 64/74 (86%)
 Strand = Plus / Minus

                                                                        
Query: 135  gtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttgg 194
            ||||| ||||||||||| ||||||||||| ||||| |||||| ||||  |||||||  ||
Sbjct: 1450 gtgtacaggcagctgccatcgtcgctcctggccgtcgggtcgaagttggtggcattccgg 1391

                          
Query: 195  tcggtgcaaccttc 208
            ||||| ||||||||
Sbjct: 1390 tcggtacaaccttc 1377



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 49/55 (89%), Gaps = 1/55 (1%)
 Strand = Plus / Minus

                                                                   
Query: 564  gcaccgaaaaagtcaatggattgtcctgggaaaggtgtcgacgatcttgacgaca 618
            |||||||| |||||||||||||| || ||| ||||||||||||| ||||| ||||
Sbjct: 1034 gcaccgaagaagtcaatggattggcc-ggggaaggtgtcgacgagcttgatgaca 981
to top
>gb|AF251264.1|AF251264 Triticum aestivum ribulose bisphosphate carboxylase activase B (RcaB)
            mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1525

 Score =  103 bits (52), Expect = 7e-19
 Identities = 176/216 (81%), Gaps = 1/216 (0%)
 Strand = Plus / Minus

                                                                        
Query: 368  agctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagc 427
            |||||||| ||||| || || |||||||||||||| |||||||| |||||||| |  |||
Sbjct: 1242 agctgcacgcgcttcacgttctcctgctcctggaccagcatgtggccgtactccatgagc 1183

                                                                        
Query: 428  ttctcgactgtcatctttggctgctcgaaggtcacgggcccgtcccgcgagttcaccagc 487
            |||||||  |||||||| ||||| ||||| |||   ||||| ||||  ||||| || |||
Sbjct: 1182 ttctcgatggtcatcttgggctggtcgaacgtcggcggcccctccctggagttgacgagc 1123

                                                                        
Query: 488  ctcttgccaatgttctcgattccggtagagccgacccacttgcgcacctcattcgtcgta 547
            | ||||   ||||||||||  ||| |   |||||||||||||||||||||  ||||||||
Sbjct: 1122 cgcttggagatgttctcgacgccgatctcgccgacccacttgcgcacctc-gtcgtcgta 1064

                                                
Query: 548  cacccgagcacgcagagcaccgaaaaagtcaatgga 583
            |||||| || ||||| || ||||| ||||| |||||
Sbjct: 1063 cacccgcgcccgcagcgcgccgaagaagtcgatgga 1028
to top
>gb|DQ023668.1| Oryza sativa (indica cultivar-group) cultivar Tetep genomic
           sequence
          Length = 234

 Score =  101 bits (51), Expect = 3e-18
 Identities = 84/95 (88%)
 Strand = Plus / Minus

                                                                       
Query: 125 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 184
           |||||||||| | |||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 135 tgcttaaaagttttaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 76

                                              
Query: 185 ggcattttggtcggtgcaaccttccggcacgggca 219
           ||||    ||||||  |||||||||||||| ||||
Sbjct: 75  ggcaacagggtcgggtcaaccttccggcacaggca 41
to top
>gb|AF338239.1|AF338239 Zantedeschia aethiopica rubisco activase (rca3) mRNA, partial cds
          Length = 1494

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 160/197 (81%)
 Strand = Plus / Minus

                                                                        
Query: 296  tagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatg 355
            |||||||| |||||||| ||||| ||||| || || ||||| |||||||||| ||||| |
Sbjct: 1164 tagaaggatccagtcttgatcgcgtcctgattggcgtcaccaagagctgcctcgctcagg 1105

                                                                        
Query: 356  taggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccg 415
            ||  |||| || |||||||| | ||| || || ||||| ||||| || ||||| |  |||
Sbjct: 1104 tacttgtcggccagctgcaccctcttcacgttctcctgttcctgcaccagcatattgccg 1045

                                                                        
Query: 416  tactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtcccgc 475
            ||||| |||||||| || |  |||||||| |||||| |||| |||   ||||| ||| ||
Sbjct: 1044 tactccagcagcttgtccagggtcatcttgggctgcgcgaacgtcggcggcccctccagc 985

                             
Query: 476  gagttcaccagcctctt 492
            |||||||||||||||||
Sbjct: 984  gagttcaccagcctctt 968



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 64/74 (86%)
 Strand = Plus / Minus

                                                                        
Query: 135  gtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttgg 194
            ||||| ||||||||||| ||||||||||| ||||| |||||| ||||  |||||||  ||
Sbjct: 1275 gtgtacaggcagctgccatcgtcgctcctggccgtcgggtcgaagttggtggcattccgg 1216

                          
Query: 195  tcggtgcaaccttc 208
            ||||| ||||||||
Sbjct: 1215 tcggtacaaccttc 1202



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 49/55 (89%), Gaps = 1/55 (1%)
 Strand = Plus / Minus

                                                                  
Query: 564 gcaccgaaaaagtcaatggattgtcctgggaaaggtgtcgacgatcttgacgaca 618
           |||||||| |||||||||||||| || ||| ||||||||||||| ||||| ||||
Sbjct: 897 gcaccgaagaagtcaatggattggcc-ggggaaggtgtcgacgagcttgatgaca 844
to top
>gb|AF305876.2| Zea mays ribulose 1,5-bisphosphate carboxylase/oxygenase activase
           precursor, mRNA, partial cds
          Length = 1336

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 132/160 (82%)
 Strand = Plus / Minus

                                                                       
Query: 297 agaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatgt 356
           ||||||| ||||||||||| || |||| ||| || ||||| ||||| |||| | | | ||
Sbjct: 919 agaaggagccagtcttcatggcgtcctcgttggcttcaccaagagcagcctcgttgaggt 860

                                                                       
Query: 357 aggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgt 416
           |  ||||||||||||||||||||||||| || |||||||||   || |||||||| ||||
Sbjct: 859 acttgtcagcaagctgcacacgcttgacgttctcctgctccgccaccagcatgtgtccgt 800

                                                   
Query: 417 actctagcagcttctcgactgtcatctttggctgctcgaa 456
           |||| |  ||||||||||  || ||||| |||||||||||
Sbjct: 799 actccaagagcttctcgatcgttatcttgggctgctcgaa 760
to top
>gb|AF084478.3| Zea mays ribulose-1,5-bisphosphate carboxylase/oxygenase activase
            precursor (rca1) mRNA, complete cds
          Length = 1424

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 132/160 (82%)
 Strand = Plus / Minus

                                                                        
Query: 297  agaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatgt 356
            ||||||| ||||||||||| || |||| ||| || ||||| ||||| |||| | | | ||
Sbjct: 1314 agaaggagccagtcttcatggcgtcctcgttggcttcaccaagagcagcctcgttgaggt 1255

                                                                        
Query: 357  aggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgt 416
            |  ||||||||||||||||||||||||| || |||||||||   || |||||||| ||||
Sbjct: 1254 acttgtcagcaagctgcacacgcttgacgttctcctgctccgccaccagcatgtgtccgt 1195

                                                    
Query: 417  actctagcagcttctcgactgtcatctttggctgctcgaa 456
            |||| |  ||||||||||  || ||||| |||||||||||
Sbjct: 1194 actccaagagcttctcgatcgttatcttgggctgctcgaa 1155
to top
>gb|AY110044.1| Zea mays CL1146_1 mRNA sequence
          Length = 1750

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 132/160 (82%)
 Strand = Plus / Minus

                                                                        
Query: 297  agaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatgt 356
            ||||||| ||||||||||| || |||| ||| || ||||| ||||| |||| | | | ||
Sbjct: 1314 agaaggagccagtcttcatggcgtcctcgttggcttcaccaagagcagcctcgttgaggt 1255

                                                                        
Query: 357  aggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgt 416
            |  ||||||||||||||||||||||||| || |||||||||   || |||||||| ||||
Sbjct: 1254 acttgtcagcaagctgcacacgcttgacgttctcctgctccgccaccagcatgtgtccgt 1195

                                                    
Query: 417  actctagcagcttctcgactgtcatctttggctgctcgaa 456
            |||| |  ||||||||||  || ||||| |||||||||||
Sbjct: 1194 actccaagagcttctcgatcgttatcttgggctgctcgaa 1155
to top
>gb|M55448.1|BLYRCAB Hordeum vulgare rubisco activase (RcaB) mRNA, complete cds
          Length = 1656

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 77/89 (86%)
 Strand = Plus / Minus

                                                                        
Query: 368  agctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagc 427
            ||||||||||||||||| || |||||||||||||| |||||||| |||||||| |  |||
Sbjct: 1392 agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagc 1333

                                         
Query: 428  ttctcgactgtcatctttggctgctcgaa 456
            ||||| |  |||||||| ||||| |||||
Sbjct: 1332 ttctctatggtcatcttgggctggtcgaa 1304



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 59/67 (88%), Gaps = 1/67 (1%)
 Strand = Plus / Minus

                                                                        
Query: 517  gccgacccacttgcgcacctcattcgtcgtacacccgagcacgcagagcaccgaaaaagt 576
            |||||||||||||||||||||  |||||||||||||| || ||||| || ||||| ||||
Sbjct: 1243 gccgacccacttgcgcacctc-gtcgtcgtacacccgtgcccgcagcgcgccgaagaagt 1185

                   
Query: 577  caatgga 583
            | |||||
Sbjct: 1184 cgatgga 1178
to top
>emb|X60093.1|BPNIR1 B.pendula mRNA for nitrite reductase
          Length = 2472

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 97/116 (83%)
 Strand = Plus / Minus

                                                                       
Query: 314 atcgcatcctggttagcatcacccagagctgcctggctcatgtaggtgtcagcaagctgc 373
           |||| ||||| ||| ||||| || |||||||| ||||||| ||| ||||| || || || 
Sbjct: 118 atcgaatcctcgtttgcatctccaagagctgcttggctcaagtacgtgtctgccagttga 59

                                                                   
Query: 374 acacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagctt 429
           || | ||| |||||||||||||||||||| |||||||  || ||||||||||||||
Sbjct: 58  actctcttcacattgtcctgctcctggacaagcatgtttccatactctagcagctt 3
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 81/95 (85%)
 Strand = Plus / Minus

                                                                           
Query: 125     tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 184
               |||||| ||||||||||||||| ||| ||||| |||| | |||||||||||  |||| ||
Sbjct: 4541413 tgcttagaaggtgtaaaggcagatgctgtcgttgctcatcgccgttgggtcaaagttgtt 4541354

                                                  
Query: 185     ggcattttggtcggtgcaaccttccggcacgggca 219
               ||||    |||||||||||||||||||||| ||||
Sbjct: 4541353 ggcaacagggtcggtgcaaccttccggcacaggca 4541319
to top
>dbj|AP005592.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0638A12
          Length = 140731

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 81/95 (85%)
 Strand = Plus / Minus

                                                                         
Query: 125   tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 184
             |||||| ||||||||||||||| ||| ||||| |||| | |||||||||||  |||| ||
Sbjct: 84787 tgcttagaaggtgtaaaggcagatgctgtcgttgctcatcgccgttgggtcaaagttgtt 84728

                                                
Query: 185   ggcattttggtcggtgcaaccttccggcacgggca 219
             ||||    |||||||||||||||||||||| ||||
Sbjct: 84727 ggcaacagggtcggtgcaaccttccggcacaggca 84693
to top
>gb|AF329934.1|AF329934 Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase
            activase 1 mRNA, complete cds
          Length = 1559

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                
Query: 560  cagagcaccgaaaaagtcaatggattgtcctgggaa 595
            ||||||||||||||||||||||||||| || |||||
Sbjct: 1113 cagagcaccgaaaaagtcaatggattggcccgggaa 1078
to top
>emb|Z21794.1|MDRBSCACA M.domestica ribulose-1,5-bisphosphate carboxylase/oxygenase activase
            mRNA
          Length = 1853

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 106/132 (80%)
 Strand = Plus / Minus

                                                                        
Query: 325  gttagcatcacccagagctgcctggctcatgtaggtgtcagcaagctgcacacgcttgac 384
            |||||||||||| ||||| |||| ||||| |||  | ||||| |  || || | ||| ||
Sbjct: 1363 gttagcatcaccaagagcagcctcgctcaagtacttatcagccaattgaactctcttcac 1304

                                                                        
Query: 385  attgtcctgctcctggacgagcatgtgcccgtactctagcagcttctcgactgtcatctt 444
            ||| || ||||| ||||| |||||||  |||||||| || ||||| ||||  ||||||||
Sbjct: 1303 attctcttgctcttggacaagcatgtttccgtactcgaggagcttttcgatagtcatctt 1244

                        
Query: 445  tggctgctcgaa 456
             |||||||||||
Sbjct: 1243 cggctgctcgaa 1232
to top
>gb|AY461703.1| Chlamydomonas reinhardtii rubisco activase (Rca) gene, complete cds
          Length = 4500

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                        
Query: 540  tcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatgga 583
            ||||||||||| || |||||||| || ||||| |||||||||||
Sbjct: 2723 tcgtcgtacacgcgggcacgcagggcgccgaagaagtcaatgga 2680
to top
>gb|M62962.1|CRERBCOA C.reinhardtii ribulose 1,5-bisphosphate carboxylase/oxygenase
            activase mRNA, complete cds
          Length = 1693

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                        
Query: 540  tcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatgga 583
            ||||||||||| || |||||||| || ||||| |||||||||||
Sbjct: 1033 tcgtcgtacacgcgggcacgcagggcgccgaagaagtcaatgga 990
to top
>gb|BT012795.1| Lycopersicon esculentum clone 113794R, mRNA sequence
          Length = 1519

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 48/55 (87%), Gaps = 1/55 (1%)
 Strand = Plus / Minus

                                                                   
Query: 560  cagagcaccgaaaaagtcaatggattgtcctgggaaaggtgtcgacgatcttgac 614
            |||||||||||| || ||||| |||||||| ||| ||| | ||||||||||||||
Sbjct: 1126 cagagcaccgaagaaatcaatagattgtccaggg-aagctatcgacgatcttgac 1073
to top
>gb|AY312576.1| Larrea tridentata Rubisco activase beta form precursor (RCA2) mRNA,
            complete cds; nuclear gene for chloroplast product
          Length = 1694

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                              
Query: 317  gcatcctggttagcatcacccagagctgcctggctcatgtaggtgtcagc 366
            |||||||||||||||||||| || || ||||  ||||||||  |||||||
Sbjct: 1355 gcatcctggttagcatcaccaagggcagcctcactcatgtacttgtcagc 1306
to top
>gb|AC114810.4| Homo sapiens BAC clone RP11-1293J14 from 2, complete sequence
          Length = 119249

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 330   catcacccagagctgcctggct 351
             ||||||||||||||||||||||
Sbjct: 51275 catcacccagagctgcctggct 51254
to top
>emb|BX000451.4| Zebrafish DNA sequence from clone CH211-30E10, complete sequence
          Length = 153155

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 30    aatatatttagagatatattaa 51
             ||||||||||||||||||||||
Sbjct: 67942 aatatatttagagatatattaa 67963
to top
>gb|AC138278.9| Mus musculus chromosome 8, clone RP23-378E4, complete sequence
          Length = 177245

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 32    tatatttagagatatattaac 52
             |||||||||||||||||||||
Sbjct: 12315 tatatttagagatatattaac 12335
to top
>gb|AC139338.3| Homo sapiens 3 BAC RP11-449O23 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 166149

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 25    atactaatatatttagagatatatt 49
             |||| ||||||||||||||||||||
Sbjct: 30449 atacaaatatatttagagatatatt 30473
to top
>emb|AL645587.9| Mouse DNA sequence from clone RP23-171O15 on chromosome 13 Contains
             part of a novel gene, complete sequence
          Length = 150986

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 26    tactaatatatttagagatat 46
             |||||||||||||||||||||
Sbjct: 20639 tactaatatatttagagatat 20659
to top
>gb|AC161354.2| Mus musculus chromosome 8, clone RP23-373C4, complete sequence
          Length = 98660

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 32    tatatttagagatatattaac 52
             |||||||||||||||||||||
Sbjct: 66387 tatatttagagatatattaac 66367
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 101     aaacatcagatattaaaagtg 121
               |||||||||||||||||||||
Sbjct: 3040440 aaacatcagatattaaaagtg 3040420
to top
>gb|AF532116.1| Mus musculus strain 129/SvJ BAC clone citb585c7 from the MHC region,
              complete sequence
          Length = 192871

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 26     tactaatatatttagagatat 46
              |||||||||||||||||||||
Sbjct: 183825 tactaatatatttagagatat 183845
to top
>gb|AC011308.8| Homo sapiens BAC clone RP11-522N18 from 2, complete sequence
          Length = 124740

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 578   aatggattgtcctgggaaagg 598
             |||||||||||||||||||||
Sbjct: 54523 aatggattgtcctgggaaagg 54543
to top
>gb|AC144525.3| Homo sapiens BAC clone CTC-833E13 from 2, complete sequence
          Length = 75381

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 252   atgcagcaagagatggtgggt 272
             |||||||||||||||||||||
Sbjct: 63530 atgcagcaagagatggtgggt 63550
to top
>emb|Y10657.1|CLRCAGENE C.littorale rca gene
          Length = 2513

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 368  agctgcacacgcttgacattgtcctgctc 396
            |||||||| ||||||||||| ||||||||
Sbjct: 2133 agctgcacgcgcttgacattctcctgctc 2105
to top
>gb|AC007625.2|AC007625 Genomic sequence of Homo sapiens clone 2314F2 from chromosome 18,
             complete sequence
          Length = 174701

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 25    atactaatatatttagagatatatt 49
             |||| ||||||||||||||||||||
Sbjct: 62509 atacaaatatatttagagatatatt 62485
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 101     aaacatcagatattaaaagtg 121
               |||||||||||||||||||||
Sbjct: 3040385 aaacatcagatattaaaagtg 3040365
to top
>emb|AL731748.3|CNS08C7X Oryza sativa chromosome 12, . BAC OSJNBa0095K18 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 159711

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 101    aaacatcagatattaaaagtg 121
              |||||||||||||||||||||
Sbjct: 114403 aaacatcagatattaaaagtg 114423
to top
>gb|AC164586.7| Mus musculus chromosome 8, clone RP24-258B3, complete sequence
          Length = 105452

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 32   tatatttagagatatattaac 52
            |||||||||||||||||||||
Sbjct: 6217 tatatttagagatatattaac 6197
to top
>gb|AC003067.59| Mus musculus Chromosome 16 BAC Clone tbx3 Syntenic To Homo sapiens
             22q11.2 DGCR Region, complete sequence
          Length = 262062

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 237   cctttacctcctcctatgca 256
             ||||||||||||||||||||
Sbjct: 46359 cctttacctcctcctatgca 46378
to top
>gb|U60105.1| Bos taurus large conductance calcium-activated potassium channel
            alpha subunit mRNA, partial cds
          Length = 3448

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 330  catcacccagagctgcctggctca 353
            |||| |||||||||||||||||||
Sbjct: 1542 catcgcccagagctgcctggctca 1565
to top
>gb|AF414359.1|AF414356S4 Mus musculus thioredoxin reductase (Trxr2) gene, exons 12 through 18,
            and complete cds
          Length = 16432

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 237  cctttacctcctcctatgca 256
            ||||||||||||||||||||
Sbjct: 1637 cctttacctcctcctatgca 1656
to top
>gb|AY312575.1| Larrea tridentata Rubisco activase alpha form precursor (RCA1) mRNA,
            complete cds; nuclear gene for chloroplast product
          Length = 1724

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 68/84 (80%)
 Strand = Plus / Minus

                                                                        
Query: 326  ttagcatcacccagagctgcctggctcatgtaggtgtcagcaagctgcacacgcttgaca 385
            ||||||||||| ||||| |||| |  ||||||  ||||||| |  || || | |||||| 
Sbjct: 1346 ttagcatcaccaagagcagcctcggacatgtatttgtcagctaattgaactctcttgacg 1287

                                    
Query: 386  ttgtcctgctcctggacgagcatg 409
            || |||||||||||||| ||||||
Sbjct: 1286 ttctcctgctcctggacaagcatg 1263
to top
>gb|AC133488.30| Mus musculus strain C57BL/6J clone rp23-432e14, complete sequence
          Length = 202128

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 237   cctttacctcctcctatgca 256
             ||||||||||||||||||||
Sbjct: 32945 cctttacctcctcctatgca 32964
to top
>ref|XM_765396.1| Giardia lamblia ATCC 50803 heat shock protein (hsp70) partial mRNA
          Length = 3732

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 8    ggtctttgccaatgggtata 27
            ||||||||||||||||||||
Sbjct: 2247 ggtctttgccaatgggtata 2266
to top
>ref|XM_751239.1| Ustilago maydis 521 hypothetical protein (UM00185.1) partial mRNA
          Length = 531

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 361 gtcagcaagctgcacacgct 380
           ||||||||||||||||||||
Sbjct: 242 gtcagcaagctgcacacgct 223
to top
>gb|AC019210.7| Homo sapiens BAC clone RP11-449G3 from 7, complete sequence
          Length = 177402

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 106    tcagatattaaaagtggcat 125
              ||||||||||||||||||||
Sbjct: 141058 tcagatattaaaagtggcat 141077
to top
>gb|AC011228.9| Homo sapiens BAC clone GS1-18A18 from 7, complete sequence
          Length = 163782

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 106    tcagatattaaaagtggcat 125
              ||||||||||||||||||||
Sbjct: 142564 tcagatattaaaagtggcat 142583
to top
>gb|AC140953.1| Pan troglodytes BAC clone RP43-37K18 from 7, complete sequence
          Length = 204813

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 106   tcagatattaaaagtggcat 125
             ||||||||||||||||||||
Sbjct: 95930 tcagatattaaaagtggcat 95911
to top
>gb|AF026000.2| Sus scrofa calcium-activated potassium channel alpha subunit mRNA,
            complete cds
          Length = 3459

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 330  catcacccagagctgcctggctca 353
            |||| |||||||||||||||||||
Sbjct: 1596 catcgcccagagctgcctggctca 1619
to top
>emb|AL049563.4|HS68D15 Human DNA sequence from clone RP1-68D15 on chromosome X Contains the
            3' end of a novel gene (FLJ23018) and the 3' end of the
            TRPC5 gene for transient receptor potential cation
            channel subfamily C member 5, complete sequence
          Length = 113028

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 27   actaatatatttagagatat 46
            ||||||||||||||||||||
Sbjct: 7687 actaatatatttagagatat 7706
to top
>gb|AC161351.3| Mus musculus chromosome 15, clone RP24-142I15, complete sequence
          Length = 161308

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 380    ttgacattgtcctgctcctg 399
              ||||||||||||||||||||
Sbjct: 126438 ttgacattgtcctgctcctg 126419
to top
>emb|Z14979.1|NTRCAJQ11 N.tabacum Rca gene for ribulose bisphosphate carboxyase activase
           (pJQ11)
          Length = 883

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 564 gcaccgaaaaagtcaatggattgtcctgggaa 595
           |||||||||||||| || |||||||| |||||
Sbjct: 345 gcaccgaaaaagtcgatagattgtccagggaa 314
to top
>ref|NM_174680.2| Bos taurus potassium large conductance calcium-activated channel,
            subfamily M, alpha member 1 (KCNMA1), mRNA
          Length = 6183

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 330  catcacccagagctgcctggctca 353
            |||| |||||||||||||||||||
Sbjct: 1912 catcgcccagagctgcctggctca 1935
to top
>gb|AE011750.1| Xanthomonas axonopodis pv. citri str. 306,  section 128 of 469 of the
            complete genome
          Length = 11388

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 134  ggtgtaaaggcagctgccgtcgtcgctc 161
            |||||| |||| ||||||||||||||||
Sbjct: 5160 ggtgtacaggctgctgccgtcgtcgctc 5133
to top
>dbj|AP007170.1| Aspergillus oryzae RIB40 genomic DNA, SC138
          Length = 504369

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 54    aaacatgcccagcaatcgcttgga 77
             |||||||||||||||||| |||||
Sbjct: 41692 aaacatgcccagcaatcgattgga 41715
to top
>gb|AC003066.18| Mus musculus Chromosome 16 BAC Clone tbx1 Syntenic To Homo sapiens
             22q11.2 DGCR Region, complete sequence
          Length = 176974

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 237   cctttacctcctcctatgca 256
             ||||||||||||||||||||
Sbjct: 34662 cctttacctcctcctatgca 34681
to top
>gb|AY033474.1| Bos taurus BK potassium ion channel isoform C mRNA, partial cds,
            alternatively spliced
          Length = 3430

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 330  catcacccagagctgcctggctca 353
            |||| |||||||||||||||||||
Sbjct: 1636 catcgcccagagctgcctggctca 1659
to top
>gb|AY033473.1| Bos taurus BK potassium ion channel isoform B mRNA, complete cds,
            alternatively spliced
          Length = 4490

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 330  catcacccagagctgcctggctca 353
            |||| |||||||||||||||||||
Sbjct: 2003 catcgcccagagctgcctggctca 2026
to top
>gb|AY033472.1| Bos taurus BK potassium ion channel isoform A mRNA, complete cds,
            alternatively spliced
          Length = 6183

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 330  catcacccagagctgcctggctca 353
            |||| |||||||||||||||||||
Sbjct: 1912 catcgcccagagctgcctggctca 1935
to top
>emb|BX000985.18| Zebrafish DNA sequence from clone DKEY-13M3 in linkage group 15,
             complete sequence
          Length = 134752

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 120   tggcatgcttaaaaggtgta 139
             ||||||||||||||||||||
Sbjct: 78235 tggcatgcttaaaaggtgta 78254
to top
>gb|AC102845.9| Mus musculus chromosome 15, clone RP24-389O7, complete sequence
          Length = 125424

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 380    ttgacattgtcctgctcctg 399
              ||||||||||||||||||||
Sbjct: 106960 ttgacattgtcctgctcctg 106979
to top
>gb|AC093634.3| Homo sapiens BAC clone RP11-168E14 from 4, complete sequence
          Length = 82529

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 24   tatactaatatatttagagatatattaa 51
            |||| ||||||||||||| |||||||||
Sbjct: 9678 tatattaatatatttagaaatatattaa 9705
to top
>ref|NM_214219.1| Sus scrofa calcium-activated potassium channel alpha subunit
            (KCNMA1), mRNA
          Length = 3459

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 330  catcacccagagctgcctggctca 353
            |||| |||||||||||||||||||
Sbjct: 1596 catcgcccagagctgcctggctca 1619
to top
>ref|XM_222660.3| PREDICTED: Rattus norvegicus leiomodin 1 (smooth muscle)
           (predicted) (Lmod1_predicted), mRNA
          Length = 1920

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 226 cttgctgtgctcctttacctcctc 249
           ||||||| ||||||||||||||||
Sbjct: 648 cttgctgggctcctttacctcctc 625
to top
>gb|AC133487.14| Mus musculus strain C57BL/6J clone rp23-285e22, complete sequence
          Length = 158595

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 237   cctttacctcctcctatgca 256
             ||||||||||||||||||||
Sbjct: 27755 cctttacctcctcctatgca 27736
to top
>emb|BX548013.3| Mouse DNA sequence from clone RP23-452C18 on chromosome X, complete
             sequence
          Length = 14756

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 29    taatatatttagagatatat 48
             ||||||||||||||||||||
Sbjct: 10253 taatatatttagagatatat 10234
to top
>gb|AC091764.35| Mus musculus strain C57BL/6J chromosome 10 clone rp23-202b12, complete
              sequence
          Length = 230848

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 105    atcagatattaaaagtggcatgct 128
              ||||||||||||||||| ||||||
Sbjct: 127875 atcagatattaaaagtgccatgct 127852


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,545,904
Number of Sequences: 3902068
Number of extensions: 4545904
Number of successful extensions: 88209
Number of sequences better than 10.0: 86
Number of HSP's better than 10.0 without gapping: 85
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 87795
Number of HSP's gapped (non-prelim): 329
length of query: 636
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 613
effective length of database: 17,143,297,704
effective search space: 10508841492552
effective search space used: 10508841492552
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top