ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal3m01 |
|---|---|
| Clone Library Name | barley_pub |
>1A1D_THEMA (Q9WY68) Putative 1-aminocyclopropane-1-carboxylate deaminase (EC| 3.5.99.7) (ACC deaminase) Length = 312 Score = 62.4 bits (150), Expect = 1e-09 Identities = 33/99 (33%), Positives = 59/99 (59%), Gaps = 7/99 (7%) Frame = -3 Query: 654 DYVQGLIDGLQSGLDSHDI-------VSIQNAKGLGYAMNTAEELKFVKDIAAATGIVLD 496 DY G + + SG++ + + + + +G GYA+ ++E+++ +K++A+ GI+LD Sbjct: 212 DYFVGKVKRIISGMEEYGLRVNETVFEVVDDYRGPGYAIPSSEDVEILKEVASIEGIILD 271 Query: 495 PVYSGKGAYAMLKDMAANPSKWNGRKVLFVHTGGLLGLY 379 PVY+ K M+ +M N K VLF+HTGG+ GL+ Sbjct: 272 PVYTAKAFRGMI-EMFRNSEK----NVLFIHTGGIFGLF 305
>1A1D_PYRHO (O57809) Putative 1-aminocyclopropane-1-carboxylate deaminase (EC| 3.5.99.7) (ACC deaminase) Length = 325 Score = 53.9 bits (128), Expect = 4e-07 Identities = 27/72 (37%), Positives = 42/72 (58%) Frame = -3 Query: 567 YAMNTAEELKFVKDIAAATGIVLDPVYSGKGAYAMLKDMAANPSKWNGRKVLFVHTGGLL 388 Y T E + ++ + GI+LDPVY+GK Y ++ D+A G K+LF+HTGG+ Sbjct: 256 YGKITGEVAQIIRKVGTREGIILDPVYTGKAFYGLV-DLARKGEL--GEKILFIHTGGIS 312 Query: 387 GLYDKVDQMSSL 352 G + D++ SL Sbjct: 313 GTFHYGDKLLSL 324
>1A1D_PYRAB (Q9V2L2) Putative 1-aminocyclopropane-1-carboxylate deaminase (EC| 3.5.99.7) (ACC deaminase) Length = 330 Score = 52.0 bits (123), Expect = 2e-06 Identities = 27/72 (37%), Positives = 40/72 (55%) Frame = -3 Query: 567 YAMNTAEELKFVKDIAAATGIVLDPVYSGKGAYAMLKDMAANPSKWNGRKVLFVHTGGLL 388 Y E K +K + G++LDPVY+GK Y ++ D+A G VLF+HTGGL Sbjct: 260 YGKIVKEVAKLIKSVGTMEGLLLDPVYTGKAFYGLM-DLAKKGDL--GESVLFIHTGGLP 316 Query: 387 GLYDKVDQMSSL 352 G++ ++M L Sbjct: 317 GIFHYGEEMLEL 328
>1A1D_PYRFU (Q8U4R3) Putative 1-aminocyclopropane-1-carboxylate deaminase (EC| 3.5.99.7) (ACC deaminase) Length = 329 Score = 50.4 bits (119), Expect = 5e-06 Identities = 26/71 (36%), Positives = 41/71 (57%) Frame = -3 Query: 567 YAMNTAEELKFVKDIAAATGIVLDPVYSGKGAYAMLKDMAANPSKWNGRKVLFVHTGGLL 388 Y T E + ++ + G++LDPVY+GK Y +L D+A G K+LF+HTGG+ Sbjct: 260 YGKITREVAETIRLVGTKEGVILDPVYTGKAFYGLL-DLAKKGEL--GEKILFIHTGGIS 316 Query: 387 GLYDKVDQMSS 355 G + D++ S Sbjct: 317 GTFHYGDKILS 327
>DCYD_SHIFL (P59330) D-cysteine desulfhydrase (EC 4.4.1.15)| Length = 327 Score = 45.8 bits (107), Expect = 1e-04 Identities = 24/64 (37%), Positives = 37/64 (57%) Frame = -3 Query: 570 GYAMNTAEELKFVKDIAAATGIVLDPVYSGKGAYAMLKDMAANPSKWNGRKVLFVHTGGL 391 GY + E ++ VK +A GI+LDPVY+GK ++ ++ K G +LF+HTGG Sbjct: 259 GYGVPNDEGMEAVKLLARLEGILLDPVYTGKAMAGLIDGISQKRFKDEG-PILFIHTGGA 317 Query: 390 LGLY 379 L+ Sbjct: 318 PALF 321
>DCYD_ECOLI (P76316) D-cysteine desulfhydrase (EC 4.4.1.15)| Length = 327 Score = 45.8 bits (107), Expect = 1e-04 Identities = 24/64 (37%), Positives = 37/64 (57%) Frame = -3 Query: 570 GYAMNTAEELKFVKDIAAATGIVLDPVYSGKGAYAMLKDMAANPSKWNGRKVLFVHTGGL 391 GY + E ++ VK +A GI+LDPVY+GK ++ ++ K G +LF+HTGG Sbjct: 259 GYGVPNDEGMEAVKLLARLEGILLDPVYTGKAMAGLIDGISQKRFKDEG-PILFIHTGGA 317 Query: 390 LGLY 379 L+ Sbjct: 318 PALF 321
>DCYD_ECOL6 (P59329) D-cysteine desulfhydrase (EC 4.4.1.15)| Length = 327 Score = 45.8 bits (107), Expect = 1e-04 Identities = 24/64 (37%), Positives = 37/64 (57%) Frame = -3 Query: 570 GYAMNTAEELKFVKDIAAATGIVLDPVYSGKGAYAMLKDMAANPSKWNGRKVLFVHTGGL 391 GY + E ++ VK +A GI+LDPVY+GK ++ ++ K G +LF+HTGG Sbjct: 259 GYGVPNDEGMEAVKLLARLEGILLDPVYTGKAMAGLIDGISQKRFKDEG-PILFIHTGGA 317 Query: 390 LGLY 379 L+ Sbjct: 318 PALF 321
>DCYD_ECO57 (Q8XBC7) D-cysteine desulfhydrase (EC 4.4.1.15)| Length = 327 Score = 45.8 bits (107), Expect = 1e-04 Identities = 24/64 (37%), Positives = 37/64 (57%) Frame = -3 Query: 570 GYAMNTAEELKFVKDIAAATGIVLDPVYSGKGAYAMLKDMAANPSKWNGRKVLFVHTGGL 391 GY + E ++ VK +A GI+LDPVY+GK ++ ++ K G +LF+HTGG Sbjct: 259 GYGVPNDEGMEAVKLLARLEGILLDPVYTGKAMAGLIDGISQKRFKDEG-PILFIHTGGA 317 Query: 390 LGLY 379 L+ Sbjct: 318 PALF 321
>1A1D_PSEUD (Q00740) 1-aminocyclopropane-1-carboxylate deaminase (EC 3.5.99.7)| (ACC deaminase) (ACCD) Length = 338 Score = 43.9 bits (102), Expect = 4e-04 Identities = 25/83 (30%), Positives = 41/83 (49%) Frame = -3 Query: 630 GLQSGLDSHDIVSIQNAKGLGYAMNTAEELKFVKDIAAATGIVLDPVYSGKGAYAMLKDM 451 GL+ + D+V + G Y + L+ ++ A G++ DPVY GK + M+ +M Sbjct: 247 GLERDIMRADVVLDERFAGPEYGLPNEGTLEAIRLCARTEGMLTDPVYEGKSMHGMI-EM 305 Query: 450 AANPSKWNGRKVLFVHTGGLLGL 382 N G +VL+ H GG+ L Sbjct: 306 VRNGEFPEGSRVLYAHLGGVPAL 328
>DCYD_SALTY (Q8ZNT7) D-cysteine desulfhydrase (EC 4.4.1.15)| Length = 327 Score = 42.4 bits (98), Expect = 0.001 Identities = 21/64 (32%), Positives = 37/64 (57%) Frame = -3 Query: 570 GYAMNTAEELKFVKDIAAATGIVLDPVYSGKGAYAMLKDMAANPSKWNGRKVLFVHTGGL 391 GY + ++ VK +A+ G++LDPVY+GK ++ ++ +G +LF+HTGG Sbjct: 259 GYGVPNDAGMEAVKLLASLEGVLLDPVYTGKAMAGLIDGISQKRFNDDG-PILFIHTGGA 317 Query: 390 LGLY 379 L+ Sbjct: 318 PALF 321
>DCYD_YERPE (Q8ZF73) D-cysteine desulfhydrase (EC 4.4.1.15)| Length = 330 Score = 42.4 bits (98), Expect = 0.001 Identities = 25/63 (39%), Positives = 34/63 (53%) Frame = -3 Query: 567 YAMNTAEELKFVKDIAAATGIVLDPVYSGKGAYAMLKDMAANPSKWNGRKVLFVHTGGLL 388 Y M E + +K +A GI+LDPVY+GK A A L D + +LF+HTGG Sbjct: 263 YGMPNEEGIAAIKLLARLEGILLDPVYTGK-AMAGLLDGIEQQKFCDKGPILFIHTGGAP 321 Query: 387 GLY 379 L+ Sbjct: 322 ALF 324
>1A1D_PSESM (Q87YW7) 1-aminocyclopropane-1-carboxylate deaminase (EC 3.5.99.7)| (ACC deaminase) (ACCD) Length = 338 Score = 41.2 bits (95), Expect = 0.003 Identities = 22/62 (35%), Positives = 32/62 (51%) Frame = -3 Query: 567 YAMNTAEELKFVKDIAAATGIVLDPVYSGKGAYAMLKDMAANPSKWNGRKVLFVHTGGLL 388 Y + L+ ++ A G++ DPVY GK + M+ DM N G KVL+ H GG+ Sbjct: 268 YGLPNDGTLEAIRLCARLEGVLTDPVYEGKSMHGMI-DMVRNGEFPEGSKVLYAHLGGVP 326 Query: 387 GL 382 L Sbjct: 327 AL 328
>DCYD_SALTI (Q8Z5S9) D-cysteine desulfhydrase (EC 4.4.1.15)| Length = 327 Score = 41.2 bits (95), Expect = 0.003 Identities = 21/64 (32%), Positives = 36/64 (56%) Frame = -3 Query: 570 GYAMNTAEELKFVKDIAAATGIVLDPVYSGKGAYAMLKDMAANPSKWNGRKVLFVHTGGL 391 GY + ++ VK +A G++LDPVY+GK ++ ++ +G +LF+HTGG Sbjct: 259 GYGVPNDAGMEAVKLLANLEGVLLDPVYTGKAMAGLIDGISQKRFNDDG-PILFIHTGGA 317 Query: 390 LGLY 379 L+ Sbjct: 318 PALF 321
>1A1D_BURPS (Q63KN7) 1-aminocyclopropane-1-carboxylate deaminase (EC 3.5.99.7)| (ACC deaminase) (ACCD) Length = 338 Score = 40.4 bits (93), Expect = 0.005 Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 2/86 (2%) Frame = -3 Query: 633 DGLQSGLD--SHDIVSIQNAKGLGYAMNTAEELKFVKDIAAATGIVLDPVYSGKGAYAML 460 D ++ G D S D+V + G Y + L+ ++ A G++ DPVY GK + M+ Sbjct: 244 DRVELGRDITSADVVLDERFGGPEYGLPNEGTLEAIRLCAKLEGVLTDPVYEGKSMHGMI 303 Query: 459 KDMAANPSKWNGRKVLFVHTGGLLGL 382 + + G KVL+ H GG+ L Sbjct: 304 EKVRLGEFP-AGSKVLYAHLGGVPAL 328
>1A1D_BURMA (Q62CE3) 1-aminocyclopropane-1-carboxylate deaminase (EC 3.5.99.7)| (ACC deaminase) (ACCD) Length = 338 Score = 40.4 bits (93), Expect = 0.005 Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 2/86 (2%) Frame = -3 Query: 633 DGLQSGLD--SHDIVSIQNAKGLGYAMNTAEELKFVKDIAAATGIVLDPVYSGKGAYAML 460 D ++ G D S D+V + G Y + L+ ++ A G++ DPVY GK + M+ Sbjct: 244 DRVELGRDITSADVVLDERFGGPEYGLPNEGTLEAIRLCAKLEGVLTDPVYEGKSMHGMI 303 Query: 459 KDMAANPSKWNGRKVLFVHTGGLLGL 382 + + G KVL+ H GG+ L Sbjct: 304 EKVRLGEFP-AGSKVLYAHLGGVPAL 328
>1A1D_SCHPO (Q9URX3) Probable 1-aminocyclopropane-1-carboxylate deaminase (EC| 3.5.99.7) (ACC deaminase) (ACCD) Length = 338 Score = 38.5 bits (88), Expect = 0.018 Identities = 22/79 (27%), Positives = 35/79 (44%) Frame = -3 Query: 630 GLQSGLDSHDIVSIQNAKGLGYAMNTAEELKFVKDIAAATGIVLDPVYSGKGAYAMLKDM 451 GL+ L D+ Y + ++ +K A G++ DPVY GK ++ + Sbjct: 247 GLEKELTESDVNIDTRFAHPAYGIPNEGTIEAIKLCGATEGVLTDPVYEGKSMQGLI-HL 305 Query: 450 AANPSKWNGRKVLFVHTGG 394 N G KVL++H GG Sbjct: 306 VRNNEIAEGSKVLYIHLGG 324
>1A1D_RHILO (Q98AM7) 1-aminocyclopropane-1-carboxylate deaminase (EC 3.5.99.7)| (ACC deaminase) (ACCD) Length = 337 Score = 37.7 bits (86), Expect = 0.030 Identities = 22/78 (28%), Positives = 38/78 (48%) Frame = -3 Query: 627 LQSGLDSHDIVSIQNAKGLGYAMNTAEELKFVKDIAAATGIVLDPVYSGKGAYAMLKDMA 448 L S L D+V +++ Y + + E + ++ A G++ DPVY GK M+ D+ Sbjct: 247 LGSELAEDDVVLLEDYAHPRYGIPSEETKEAIRLCARLEGMITDPVYEGKSMQGMI-DLV 305 Query: 447 ANPSKWNGRKVLFVHTGG 394 G ++L+ H GG Sbjct: 306 QKGFFPAGSRILYAHLGG 323
>1A1D_VARPD (Q6J256) 1-aminocyclopropane-1-carboxylate deaminase (EC 3.5.99.7)| (ACC deaminase) (ACCD) Length = 338 Score = 37.0 bits (84), Expect = 0.052 Identities = 22/74 (29%), Positives = 36/74 (48%) Frame = -3 Query: 603 DIVSIQNAKGLGYAMNTAEELKFVKDIAAATGIVLDPVYSGKGAYAMLKDMAANPSKWNG 424 D+V + G Y + L+ ++ A G++ DPVY GK + M++ + G Sbjct: 256 DVVLDRRFGGPEYGLPNEGTLEAIRLSARFEGMLTDPVYEGKSMHGMIEKVRLGEFP-AG 314 Query: 423 RKVLFVHTGGLLGL 382 KVL+ H GG+ L Sbjct: 315 SKVLYAHLGGVPAL 328
>1A1D_RALSO (Q8XS35) 1-aminocyclopropane-1-carboxylate deaminase (EC 3.5.99.7)| (ACC deaminase) (ACCD) Length = 338 Score = 36.6 bits (83), Expect = 0.068 Identities = 22/74 (29%), Positives = 34/74 (45%) Frame = -3 Query: 603 DIVSIQNAKGLGYAMNTAEELKFVKDIAAATGIVLDPVYSGKGAYAMLKDMAANPSKWNG 424 D+V G Y + L+ ++ A G++ DPVY GK + M+ D G Sbjct: 256 DVVLDTRYGGPEYGLPNEGTLEAIRLCARQEGMLTDPVYEGKSMHGMI-DRVRGGEFPEG 314 Query: 423 RKVLFVHTGGLLGL 382 +VL+ H GG+ L Sbjct: 315 SRVLYAHLGGVPAL 328
>1A1D_PSEPU (Q5PWZ8) 1-aminocyclopropane-1-carboxylate deaminase (EC 3.5.99.7)| (ACC deaminase) (ACCD) Length = 338 Score = 36.6 bits (83), Expect = 0.068 Identities = 18/58 (31%), Positives = 30/58 (51%) Frame = -3 Query: 567 YAMNTAEELKFVKDIAAATGIVLDPVYSGKGAYAMLKDMAANPSKWNGRKVLFVHTGG 394 Y + L+ ++ + G++ DPVY GK + M+ +M +G KVL+ H GG Sbjct: 268 YGLPNEGTLEAIRLCGSLEGVLTDPVYEGKSMHGMI-EMVRRGEFPDGSKVLYAHLGG 324
>1A1D_PSES0 (P30297) 1-aminocyclopropane-1-carboxylate deaminase (EC 3.5.99.7)| (ACC deaminase) (ACCD) Length = 338 Score = 36.2 bits (82), Expect = 0.088 Identities = 18/58 (31%), Positives = 29/58 (50%) Frame = -3 Query: 567 YAMNTAEELKFVKDIAAATGIVLDPVYSGKGAYAMLKDMAANPSKWNGRKVLFVHTGG 394 Y + L+ ++ + G++ DPVY GK + M+ +M G KVL+ H GG Sbjct: 268 YGLPNEGTLEAIRLCGSLEGVLTDPVYEGKSMHGMI-EMVRRGEFPEGSKVLYAHLGG 324
>1A1D_PSEFL (Q51813) 1-aminocyclopropane-1-carboxylate deaminase (EC 3.5.99.7)| (ACC deaminase) (ACCD) Length = 338 Score = 36.2 bits (82), Expect = 0.088 Identities = 18/58 (31%), Positives = 29/58 (50%) Frame = -3 Query: 567 YAMNTAEELKFVKDIAAATGIVLDPVYSGKGAYAMLKDMAANPSKWNGRKVLFVHTGG 394 Y + L+ ++ + G++ DPVY GK + M+ +M G KVL+ H GG Sbjct: 268 YGLPNEGTLEAIRLCGSLEGVLTDPVYEGKSMHGMI-EMVRRGEFPEGSKVLYAHLGG 324
>1A1D_ENTCL (Q9ZHW3) 1-aminocyclopropane-1-carboxylate deaminase (EC 3.5.99.7)| (ACC deaminase) (ACCD) Length = 338 Score = 36.2 bits (82), Expect = 0.088 Identities = 18/58 (31%), Positives = 29/58 (50%) Frame = -3 Query: 567 YAMNTAEELKFVKDIAAATGIVLDPVYSGKGAYAMLKDMAANPSKWNGRKVLFVHTGG 394 Y + L+ ++ + G++ DPVY GK + M+ +M G KVL+ H GG Sbjct: 268 YGLPNEGTLEAIRLCGSLEGVLTDPVYEGKSMHGMI-EMVRRGEFPEGSKVLYAHLGG 324
>1A1D_BRAJA (Q89XR6) 1-aminocyclopropane-1-carboxylate deaminase (EC 3.5.99.7)| (ACC deaminase) (ACCD) Length = 337 Score = 36.2 bits (82), Expect = 0.088 Identities = 20/70 (28%), Positives = 34/70 (48%) Frame = -3 Query: 603 DIVSIQNAKGLGYAMNTAEELKFVKDIAAATGIVLDPVYSGKGAYAMLKDMAANPSKWNG 424 D+V I++ Y + + E + ++ A ++ DPVY GK ++ D+ G Sbjct: 255 DVVLIEDYAYPAYGVPSEETKEAIRLTARLEAMITDPVYEGKSMQGLI-DLTQKGYFEKG 313 Query: 423 RKVLFVHTGG 394 KVL+ H GG Sbjct: 314 AKVLYAHLGG 323
>1A1D_WILSA (Q7M523) 1-aminocyclopropane-1-carboxylate deaminase (EC 3.5.99.7)| (ACC deaminase) (ACCD) Length = 341 Score = 35.4 bits (80), Expect = 0.15 Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 3/61 (4%) Frame = -3 Query: 567 YAMNTAEELKFVKDIAAATGIVLDPVYSGK---GAYAMLKDMAANPSKWNGRKVLFVHTG 397 Y + ++ ++ A G++ DPVY GK G A++K+ P G VL+VH G Sbjct: 269 YGVPNEGTIEAIRTCAEQEGVLTDPVYEGKSMQGLIALIKEDYFKP----GANVLYVHLG 324 Query: 396 G 394 G Sbjct: 325 G 325
>1A1D_RHILV (Q93AG0) 1-aminocyclopropane-1-carboxylate deaminase (EC 3.5.99.7)| (ACC deaminase) (ACCD) Length = 339 Score = 35.0 bits (79), Expect = 0.20 Identities = 19/58 (32%), Positives = 29/58 (50%) Frame = -3 Query: 567 YAMNTAEELKFVKDIAAATGIVLDPVYSGKGAYAMLKDMAANPSKWNGRKVLFVHTGG 394 Y + + E + ++ A ++ DPVY GK M+ D+A G KVL+ H GG Sbjct: 269 YGVPSEETNEAIRLAARTEAMITDPVYEGKSMQGMI-DLARKGFFPEGSKVLYAHLGG 325
>1A1D_AGRTU (Q9AHF0) 1-aminocyclopropane-1-carboxylate deaminase (EC 3.5.99.7)| (ACC deaminase) (ACCD) Length = 337 Score = 33.9 bits (76), Expect = 0.44 Identities = 20/70 (28%), Positives = 33/70 (47%) Frame = -3 Query: 603 DIVSIQNAKGLGYAMNTAEELKFVKDIAAATGIVLDPVYSGKGAYAMLKDMAANPSKWNG 424 +IV + + Y + + E + ++ A ++ DPVY GK M+ D+ G Sbjct: 255 EIVILNDYAYPAYGVPSNETNEAIRLAARTEAMITDPVYEGKSMQGMI-DLTRKGFFPKG 313 Query: 423 RKVLFVHTGG 394 KVL+ H GG Sbjct: 314 SKVLYAHLGG 323
>1A1D_CRYNE (Q5KMX3) Probable 1-aminocyclopropane-1-carboxylate deaminase (EC| 3.5.99.7) (ACC deaminase) (ACCD) Length = 345 Score = 33.5 bits (75), Expect = 0.57 Identities = 18/58 (31%), Positives = 27/58 (46%) Frame = -3 Query: 567 YAMNTAEELKFVKDIAAATGIVLDPVYSGKGAYAMLKDMAANPSKWNGRKVLFVHTGG 394 Y + E + +K A + DPVY GK M++ + K G VL++H GG Sbjct: 275 YGIPDDETIAAMKLAAQTDAFITDPVYEGKSMAGMIRLVKEGAIK-EGSNVLYIHLGG 331
>Y474_TREPA (O83487) UPF0082 protein TP0474| Length = 245 Score = 30.0 bits (66), Expect = 6.3 Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 1/71 (1%) Frame = -3 Query: 594 SIQNAKGLGYAMNTAEELKFVKDIAAATGIV-LDPVYSGKGAYAMLKDMAANPSKWNGRK 418 +I++AKG A KF+K+I+ A + DP + + A+LK AAN K N + Sbjct: 9 TIKHAKGAADAKRGQLFTKFIKEISVAARMAGGDPQANPRLRTAILKARAANMPKDNIER 68 Query: 417 VLFVHTGGLLG 385 + TG L G Sbjct: 69 AIKKGTGELSG 79
>SYC_MYCPU (Q98R33) Cysteinyl-tRNA synthetase (EC 6.1.1.16) (Cysteine--tRNA| ligase) (CysRS) Length = 596 Score = 30.0 bits (66), Expect = 6.3 Identities = 23/99 (23%), Positives = 44/99 (44%), Gaps = 6/99 (6%) Frame = -3 Query: 636 IDGLQSGLDSHDIVSIQNAKGLGYAMNTAEELKF------VKDIAAATGIVLDPVYSGKG 475 ID + + L + ++ Q+ K ++ EEL+ + + V D V+ G Sbjct: 166 IDNIVNSLAKNKMLVFQSKKLSNFSQRYFEELRKNTKNEKIFKVYLCGPTVYDEVHIGNM 225 Query: 474 AYAMLKDMAANPSKWNGRKVLFVHTGGLLGLYDKVDQMS 358 ++ D+ K+ G+K LFVH + + DK+ + S Sbjct: 226 RSVVVVDLIVRAQKYLGKKTLFVH--NITDIDDKIIERS 262
>GCH1_CHRVO (Q7NYZ2) GTP cyclohydrolase I (EC 3.5.4.16) (GTP-CH-I)| Length = 206 Score = 29.6 bits (65), Expect = 8.3 Identities = 15/47 (31%), Positives = 24/47 (51%) Frame = -3 Query: 612 DSHDIVSIQNAKGLGYAMNTAEELKFVKDIAAATGIVLDPVYSGKGA 472 D HD + Q + A + V D+ A+GI +DP+++GK A Sbjct: 5 DDHDHAACQRPLERVRPFDAAAFERAVADMLTASGIAIDPIHTGKTA 51 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 91,653,685 Number of Sequences: 219361 Number of extensions: 1937840 Number of successful extensions: 4540 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 4388 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4523 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6257125380 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
