| Clone Name | rbaal4a22 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_197204.1| Oryza sativa (japonica cultivar-group) putative PKCq-interacting protein (OSJNBa0078O01.9), mRNA Length = 1840 Score = 430 bits (217), Expect = e-117 Identities = 469/553 (84%) Strand = Plus / Minus Query: 143 actccgaaagagtggccttcagctctccactcttttccagctcgagaacaatgtcacagc 202 |||||||||| |||| |||||||||||||||||| |||||||| ||||| |||||||||| Sbjct: 1604 actccgaaagcgtggacttcagctctccactcttctccagctcaagaacgatgtcacagc 1545 Query: 203 cccccatcagttctgatttgtagtagagttgggggaaggtgggccagttcgagtatgtct 262 | || |||||||||||||||||||| || || ||||| ||||||||||| ||||| |||| Sbjct: 1544 ctccaatcagttctgatttgtagtacagctgagggaacgtgggccagttggagtacgtct 1485 Query: 263 tcagaccttgtctaacttcctcatcagatagaatgtcaaaggacccaaagcttatccctg 322 ||| ||||| ||||| ||||| || ||||| ||||| || | || ||||| | |||| Sbjct: 1484 tcaagccttgcctaacctcctcgtcggataggatgtcgaacgctccgaagctgactcctg 1425 Query: 323 ctcctttcaaggcattcaccactttcgaactaaagccacaacgtggattatctgggttgc 382 || |||| |||||||| || |||||||| ||||| || || || ||||||| ||| Sbjct: 1424 cttgcttcagtgcattcacaaccttcgaactgaagccgcagcggggggcatctggggtgc 1365 Query: 383 ccttcatgaacagcatcactggggatgaggaaattagagcctcgagtcggccatctaggc 442 |||||||||| ||||||||||||| |||||||| || |||| || ||| | ||||| | Sbjct: 1364 ccttcatgaagagcatcactggggcagaggaaatcagggccttcaggcggtcttctagac 1305 Query: 443 tctcttccggaataatccctttctcagtcagaaccttcttcagttccccactcttatgca 502 | |||| || || ||||||||||||| ||||||||||| || |||||||||||||||| Sbjct: 1304 tttctttcgcaacgatccctttctcagatagaaccttcttaagctccccactcttatgca 1245 Query: 503 tctccatcactatgtccgaaccaccaaccaattcacccttgatgtacacctgagggtaac 562 ||||||| || ||||| || || ||||||| |||||| || ||||||| |||||||||| Sbjct: 1244 tctccataacaatgtctgatccgccaaccagttcaccgtttatgtacagttgagggtaac 1185 Query: 563 taggccagtttgatagaacctttaggccctgcctaacctcatcatctgtaagaatgtcaa 622 ||||||||||||| |||| |||||| |||||||||||||||||||| ||||||||||||| Sbjct: 1184 taggccagtttgagagaagctttagaccctgcctaacctcatcatccgtaagaatgtcaa 1125 Query: 623 aacttgagaaaggaatcttctcttgcttaagaatgtgaacgacctttccactgaatccgc 682 ||||||||||||| |||||||||||||||||||| || || | |||||||||||||| | Sbjct: 1124 aacttgagaaagggatcttctcttgcttaagaatatgcactagttttccactgaatccac 1065 Query: 683 acttgggctcctc 695 ||||||||||||| Sbjct: 1064 acttgggctcctc 1052
>gb|AC079888.10| Oryza sativa chromosome 10 BAC OSJNBa0078O01 genomic sequence, complete sequence Length = 146664 Score = 430 bits (217), Expect = e-117 Identities = 469/553 (84%) Strand = Plus / Minus Query: 143 actccgaaagagtggccttcagctctccactcttttccagctcgagaacaatgtcacagc 202 |||||||||| |||| |||||||||||||||||| |||||||| ||||| |||||||||| Sbjct: 87300 actccgaaagcgtggacttcagctctccactcttctccagctcaagaacgatgtcacagc 87241 Query: 203 cccccatcagttctgatttgtagtagagttgggggaaggtgggccagttcgagtatgtct 262 | || |||||||||||||||||||| || || ||||| ||||||||||| ||||| |||| Sbjct: 87240 ctccaatcagttctgatttgtagtacagctgagggaacgtgggccagttggagtacgtct 87181 Query: 263 tcagaccttgtctaacttcctcatcagatagaatgtcaaaggacccaaagcttatccctg 322 ||| ||||| ||||| ||||| || ||||| ||||| || | || ||||| | |||| Sbjct: 87180 tcaagccttgcctaacctcctcgtcggataggatgtcgaacgctccgaagctgactcctg 87121 Query: 323 ctcctttcaaggcattcaccactttcgaactaaagccacaacgtggattatctgggttgc 382 || |||| |||||||| || |||||||| ||||| || || || ||||||| ||| Sbjct: 87120 cttgcttcagtgcattcacaaccttcgaactgaagccgcagcggggggcatctggggtgc 87061 Query: 383 ccttcatgaacagcatcactggggatgaggaaattagagcctcgagtcggccatctaggc 442 |||||||||| ||||||||||||| |||||||| || |||| || ||| | ||||| | Sbjct: 87060 ccttcatgaagagcatcactggggcagaggaaatcagggccttcaggcggtcttctagac 87001 Query: 443 tctcttccggaataatccctttctcagtcagaaccttcttcagttccccactcttatgca 502 | |||| || || ||||||||||||| ||||||||||| || |||||||||||||||| Sbjct: 87000 tttctttcgcaacgatccctttctcagatagaaccttcttaagctccccactcttatgca 86941 Query: 503 tctccatcactatgtccgaaccaccaaccaattcacccttgatgtacacctgagggtaac 562 ||||||| || ||||| || || ||||||| |||||| || ||||||| |||||||||| Sbjct: 86940 tctccataacaatgtctgatccgccaaccagttcaccgtttatgtacagttgagggtaac 86881 Query: 563 taggccagtttgatagaacctttaggccctgcctaacctcatcatctgtaagaatgtcaa 622 ||||||||||||| |||| |||||| |||||||||||||||||||| ||||||||||||| Sbjct: 86880 taggccagtttgagagaagctttagaccctgcctaacctcatcatccgtaagaatgtcaa 86821 Query: 623 aacttgagaaaggaatcttctcttgcttaagaatgtgaacgacctttccactgaatccgc 682 ||||||||||||| |||||||||||||||||||| || || | |||||||||||||| | Sbjct: 86820 aacttgagaaagggatcttctcttgcttaagaatatgcactagttttccactgaatccac 86761 Query: 683 acttgggctcctc 695 ||||||||||||| Sbjct: 86760 acttgggctcctc 86748
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 430 bits (217), Expect = e-117 Identities = 469/553 (84%) Strand = Plus / Minus Query: 143 actccgaaagagtggccttcagctctccactcttttccagctcgagaacaatgtcacagc 202 |||||||||| |||| |||||||||||||||||| |||||||| ||||| |||||||||| Sbjct: 18583889 actccgaaagcgtggacttcagctctccactcttctccagctcaagaacgatgtcacagc 18583830 Query: 203 cccccatcagttctgatttgtagtagagttgggggaaggtgggccagttcgagtatgtct 262 | || |||||||||||||||||||| || || ||||| ||||||||||| ||||| |||| Sbjct: 18583829 ctccaatcagttctgatttgtagtacagctgagggaacgtgggccagttggagtacgtct 18583770 Query: 263 tcagaccttgtctaacttcctcatcagatagaatgtcaaaggacccaaagcttatccctg 322 ||| ||||| ||||| ||||| || ||||| ||||| || | || ||||| | |||| Sbjct: 18583769 tcaagccttgcctaacctcctcgtcggataggatgtcgaacgctccgaagctgactcctg 18583710 Query: 323 ctcctttcaaggcattcaccactttcgaactaaagccacaacgtggattatctgggttgc 382 || |||| |||||||| || |||||||| ||||| || || || ||||||| ||| Sbjct: 18583709 cttgcttcagtgcattcacaaccttcgaactgaagccgcagcggggggcatctggggtgc 18583650 Query: 383 ccttcatgaacagcatcactggggatgaggaaattagagcctcgagtcggccatctaggc 442 |||||||||| ||||||||||||| |||||||| || |||| || ||| | ||||| | Sbjct: 18583649 ccttcatgaagagcatcactggggcagaggaaatcagggccttcaggcggtcttctagac 18583590 Query: 443 tctcttccggaataatccctttctcagtcagaaccttcttcagttccccactcttatgca 502 | |||| || || ||||||||||||| ||||||||||| || |||||||||||||||| Sbjct: 18583589 tttctttcgcaacgatccctttctcagatagaaccttcttaagctccccactcttatgca 18583530 Query: 503 tctccatcactatgtccgaaccaccaaccaattcacccttgatgtacacctgagggtaac 562 ||||||| || ||||| || || ||||||| |||||| || ||||||| |||||||||| Sbjct: 18583529 tctccataacaatgtctgatccgccaaccagttcaccgtttatgtacagttgagggtaac 18583470 Query: 563 taggccagtttgatagaacctttaggccctgcctaacctcatcatctgtaagaatgtcaa 622 ||||||||||||| |||| |||||| |||||||||||||||||||| ||||||||||||| Sbjct: 18583469 taggccagtttgagagaagctttagaccctgcctaacctcatcatccgtaagaatgtcaa 18583410 Query: 623 aacttgagaaaggaatcttctcttgcttaagaatgtgaacgacctttccactgaatccgc 682 ||||||||||||| |||||||||||||||||||| || || | |||||||||||||| | Sbjct: 18583409 aacttgagaaagggatcttctcttgcttaagaatatgcactagttttccactgaatccac 18583350 Query: 683 acttgggctcctc 695 ||||||||||||| Sbjct: 18583349 acttgggctcctc 18583337
>dbj|AK067982.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013121J12, full insert sequence Length = 1949 Score = 430 bits (217), Expect = e-117 Identities = 469/553 (84%) Strand = Plus / Minus Query: 143 actccgaaagagtggccttcagctctccactcttttccagctcgagaacaatgtcacagc 202 |||||||||| |||| |||||||||||||||||| |||||||| ||||| |||||||||| Sbjct: 1614 actccgaaagcgtggacttcagctctccactcttctccagctcaagaacgatgtcacagc 1555 Query: 203 cccccatcagttctgatttgtagtagagttgggggaaggtgggccagttcgagtatgtct 262 | || |||||||||||||||||||| || || ||||| ||||||||||| ||||| |||| Sbjct: 1554 ctccaatcagttctgatttgtagtacagctgagggaacgtgggccagttggagtacgtct 1495 Query: 263 tcagaccttgtctaacttcctcatcagatagaatgtcaaaggacccaaagcttatccctg 322 ||| ||||| ||||| ||||| || ||||| ||||| || | || ||||| | |||| Sbjct: 1494 tcaagccttgcctaacctcctcgtcggataggatgtcgaacgctccgaagctgactcctg 1435 Query: 323 ctcctttcaaggcattcaccactttcgaactaaagccacaacgtggattatctgggttgc 382 || |||| |||||||| || |||||||| ||||| || || || ||||||| ||| Sbjct: 1434 cttgcttcagtgcattcacaaccttcgaactgaagccgcagcggggggcatctggggtgc 1375 Query: 383 ccttcatgaacagcatcactggggatgaggaaattagagcctcgagtcggccatctaggc 442 |||||||||| ||||||||||||| |||||||| || |||| || ||| | ||||| | Sbjct: 1374 ccttcatgaagagcatcactggggcagaggaaatcagggccttcaggcggtcttctagac 1315 Query: 443 tctcttccggaataatccctttctcagtcagaaccttcttcagttccccactcttatgca 502 | |||| || || ||||||||||||| ||||||||||| || |||||||||||||||| Sbjct: 1314 tttctttcgcaacgatccctttctcagatagaaccttcttaagctccccactcttatgca 1255 Query: 503 tctccatcactatgtccgaaccaccaaccaattcacccttgatgtacacctgagggtaac 562 ||||||| || ||||| || || ||||||| |||||| || ||||||| |||||||||| Sbjct: 1254 tctccataacaatgtctgatccgccaaccagttcaccgtttatgtacagttgagggtaac 1195 Query: 563 taggccagtttgatagaacctttaggccctgcctaacctcatcatctgtaagaatgtcaa 622 ||||||||||||| |||| |||||| |||||||||||||||||||| ||||||||||||| Sbjct: 1194 taggccagtttgagagaagctttagaccctgcctaacctcatcatccgtaagaatgtcaa 1135 Query: 623 aacttgagaaaggaatcttctcttgcttaagaatgtgaacgacctttccactgaatccgc 682 ||||||||||||| |||||||||||||||||||| || || | |||||||||||||| | Sbjct: 1134 aacttgagaaagggatcttctcttgcttaagaatatgcactagttttccactgaatccac 1075 Query: 683 acttgggctcctc 695 ||||||||||||| Sbjct: 1074 acttgggctcctc 1062
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 430 bits (217), Expect = e-117 Identities = 469/553 (84%) Strand = Plus / Minus Query: 143 actccgaaagagtggccttcagctctccactcttttccagctcgagaacaatgtcacagc 202 |||||||||| |||| |||||||||||||||||| |||||||| ||||| |||||||||| Sbjct: 18594342 actccgaaagcgtggacttcagctctccactcttctccagctcaagaacgatgtcacagc 18594283 Query: 203 cccccatcagttctgatttgtagtagagttgggggaaggtgggccagttcgagtatgtct 262 | || |||||||||||||||||||| || || ||||| ||||||||||| ||||| |||| Sbjct: 18594282 ctccaatcagttctgatttgtagtacagctgagggaacgtgggccagttggagtacgtct 18594223 Query: 263 tcagaccttgtctaacttcctcatcagatagaatgtcaaaggacccaaagcttatccctg 322 ||| ||||| ||||| ||||| || ||||| ||||| || | || ||||| | |||| Sbjct: 18594222 tcaagccttgcctaacctcctcgtcggataggatgtcgaacgctccgaagctgactcctg 18594163 Query: 323 ctcctttcaaggcattcaccactttcgaactaaagccacaacgtggattatctgggttgc 382 || |||| |||||||| || |||||||| ||||| || || || ||||||| ||| Sbjct: 18594162 cttgcttcagtgcattcacaaccttcgaactgaagccgcagcggggggcatctggggtgc 18594103 Query: 383 ccttcatgaacagcatcactggggatgaggaaattagagcctcgagtcggccatctaggc 442 |||||||||| ||||||||||||| |||||||| || |||| || ||| | ||||| | Sbjct: 18594102 ccttcatgaagagcatcactggggcagaggaaatcagggccttcaggcggtcttctagac 18594043 Query: 443 tctcttccggaataatccctttctcagtcagaaccttcttcagttccccactcttatgca 502 | |||| || || ||||||||||||| ||||||||||| || |||||||||||||||| Sbjct: 18594042 tttctttcgcaacgatccctttctcagatagaaccttcttaagctccccactcttatgca 18593983 Query: 503 tctccatcactatgtccgaaccaccaaccaattcacccttgatgtacacctgagggtaac 562 ||||||| || ||||| || || ||||||| |||||| || ||||||| |||||||||| Sbjct: 18593982 tctccataacaatgtctgatccgccaaccagttcaccgtttatgtacagttgagggtaac 18593923 Query: 563 taggccagtttgatagaacctttaggccctgcctaacctcatcatctgtaagaatgtcaa 622 ||||||||||||| |||| |||||| |||||||||||||||||||| ||||||||||||| Sbjct: 18593922 taggccagtttgagagaagctttagaccctgcctaacctcatcatccgtaagaatgtcaa 18593863 Query: 623 aacttgagaaaggaatcttctcttgcttaagaatgtgaacgacctttccactgaatccgc 682 ||||||||||||| |||||||||||||||||||| || || | |||||||||||||| | Sbjct: 18593862 aacttgagaaagggatcttctcttgcttaagaatatgcactagttttccactgaatccac 18593803 Query: 683 acttgggctcctc 695 ||||||||||||| Sbjct: 18593802 acttgggctcctc 18593790
>dbj|AK059628.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-H12, full insert sequence Length = 1815 Score = 422 bits (213), Expect = e-115 Identities = 468/553 (84%) Strand = Plus / Minus Query: 143 actccgaaagagtggccttcagctctccactcttttccagctcgagaacaatgtcacagc 202 |||||||||| |||| |||||||||||||||||| |||||||| ||||| |||||||||| Sbjct: 1614 actccgaaagcgtggacttcagctctccactcttctccagctcaagaacgatgtcacagc 1555 Query: 203 cccccatcagttctgatttgtagtagagttgggggaaggtgggccagttcgagtatgtct 262 | || |||||||||||||||||||| || || ||||| ||||||||||| ||||| |||| Sbjct: 1554 ctccaatcagttctgatttgtagtacagctgagggaacgtgggccagttggagtacgtct 1495 Query: 263 tcagaccttgtctaacttcctcatcagatagaatgtcaaaggacccaaagcttatccctg 322 ||| ||||| ||||| ||||| || ||||| ||||| || | || ||||| | |||| Sbjct: 1494 tcaagccttgcctaacctcctcgtcggataggatgtcgaacgctccgaagctgactcctg 1435 Query: 323 ctcctttcaaggcattcaccactttcgaactaaagccacaacgtggattatctgggttgc 382 || |||| |||||||| || |||||||| ||||| || || || ||||||| ||| Sbjct: 1434 cttgcttcagtgcattcacaaccttcgaactgaagccgcagcggggggcatctggggtgc 1375 Query: 383 ccttcatgaacagcatcactggggatgaggaaattagagcctcgagtcggccatctaggc 442 |||||||||| ||||||||||||| |||||||| || |||| || ||| | ||||| | Sbjct: 1374 ccttcatgaagagcatcactggggcagaggaaatcagggccttcaggcggtcttctagac 1315 Query: 443 tctcttccggaataatccctttctcagtcagaaccttcttcagttccccactcttatgca 502 | |||| || || ||||||||||||| ||||||||||| || |||||||||||||||| Sbjct: 1314 tttctttcgcaacgatccctttctcagatagaaccttcttaagctccccactcttatgca 1255 Query: 503 tctccatcactatgtccgaaccaccaaccaattcacccttgatgtacacctgagggtaac 562 ||||||| || ||||| || || ||||||| |||||| || ||||||| |||||||||| Sbjct: 1254 tctccataacaatgtctgatccgccaaccagttcaccgtttatgtacagttgagggtaac 1195 Query: 563 taggccagtttgatagaacctttaggccctgcctaacctcatcatctgtaagaatgtcaa 622 ||||||||||||| |||| ||||| |||||||||||||||||||| ||||||||||||| Sbjct: 1194 taggccagtttgagagaagttttagaccctgcctaacctcatcatccgtaagaatgtcaa 1135 Query: 623 aacttgagaaaggaatcttctcttgcttaagaatgtgaacgacctttccactgaatccgc 682 ||||||||||||| |||||||||||||||||||| || || | |||||||||||||| | Sbjct: 1134 aacttgagaaagggatcttctcttgcttaagaatatgcactagttttccactgaatccac 1075 Query: 683 acttgggctcctc 695 ||||||||||||| Sbjct: 1074 acttgggctcctc 1062
>gb|BT018250.1| Zea mays clone EL01N0563G06.c mRNA sequence Length = 866 Score = 232 bits (117), Expect = 1e-57 Identities = 213/245 (86%) Strand = Plus / Minus Query: 451 ggaataatccctttctcagtcagaaccttcttcagttccccactcttatgcatctccatc 510 ||||||| ||||||||||| ||||||||||||||| || |||||||||||||| |||||| Sbjct: 600 ggaataacccctttctcagacagaaccttcttcagctcaccactcttatgcatttccatc 541 Query: 511 actatgtccgaaccaccaaccaattcacccttgatgtacacctgagggtaactaggccag 570 |||||||| || || ||||||| ||||| || ||||||| ||||||||||| |||||| Sbjct: 540 actatgtctgagccgccaaccagctcaccttttatgtacagttgagggtaactgggccag 481 Query: 571 tttgatagaacctttaggccctgcctaacctcatcatctgtaagaatgtcaaaacttgag 630 ||||| || ||||| || ||||| |||||||||||||||| ||| ||||||||||||||| Sbjct: 480 tttgagagcaccttaagcccctgtctaacctcatcatctgaaaggatgtcaaaacttgag 421 Query: 631 aaaggaatcttctcttgcttaagaatgtgaacgacctttccactgaatccgcacttgggc 690 |||||||| |||||||||||||| ||||| || | ||| |||||||| || ||||| || Sbjct: 420 aaaggaatattctcttgcttaagtatgtggaccaacttcccactgaacccacactttggt 361 Query: 691 tcctc 695 ||||| Sbjct: 360 tcctc 356 Score = 165 bits (83), Expect = 2e-37 Identities = 182/215 (84%) Strand = Plus / Minus Query: 187 agaacaatgtcacagccccccatcagttctgatttgtagtagagttgggggaaggtgggc 246 ||||| || ||||| ||||| ||||| || |||||||||||||| ||||||||||||||| Sbjct: 864 agaacgatatcacatcccccaatcagctccgatttgtagtagagctgggggaaggtgggc 805 Query: 247 cagttcgagtatgtcttcagaccttgtctaacttcctcatcagatagaatgtcaaaggac 306 ||||| ||||| ||||||| |||||| ||||||||||| ||||||| ||||| |||||| Sbjct: 804 cagttggagtacgtcttcaaaccttgcctaacttcctcgtcagataagatgtcgaaggac 745 Query: 307 ccaaagcttatccctgctcctttcaaggcattcaccactttcgaactaaagccacaacgt 366 |||||||| | |||| | |||||||| ||||| || |||||||| ||||| ||||| Sbjct: 744 ccaaagctgaccccttccttcttcaaggcgttcacaaccttcgaactgaagccgcaacga 685 Query: 367 ggattatctgggttgcccttcatgaacagcatcac 401 ||| |||||| ||||||||||||| |||||||| Sbjct: 684 ggagcatctggagtgcccttcatgaaaagcatcac 650
>gb|AY105414.1| Zea mays PCO079032 mRNA sequence Length = 2077 Score = 232 bits (117), Expect = 1e-57 Identities = 213/245 (86%) Strand = Plus / Minus Query: 451 ggaataatccctttctcagtcagaaccttcttcagttccccactcttatgcatctccatc 510 ||||||| ||||||||||| ||||||||||||||| || |||||||| |||||||||||| Sbjct: 1437 ggaataacccctttctcagacagaaccttcttcagctcaccactcttgtgcatctccatc 1378 Query: 511 actatgtccgaaccaccaaccaattcacccttgatgtacacctgagggtaactaggccag 570 |||||||| || || ||||||| ||||| || ||||||| ||||||||||| |||||| Sbjct: 1377 actatgtctgagccgccaaccagctcaccttttatgtacagttgagggtaactgggccag 1318 Query: 571 tttgatagaacctttaggccctgcctaacctcatcatctgtaagaatgtcaaaacttgag 630 ||||| || ||||| || ||||| |||||||||||||||| ||| ||||||||||||||| Sbjct: 1317 tttgagagcaccttcagcccctgtctaacctcatcatctgaaaggatgtcaaaacttgag 1258 Query: 631 aaaggaatcttctcttgcttaagaatgtgaacgacctttccactgaatccgcacttgggc 690 |||||||| |||||||||||||| ||||| || | ||| |||||||| || ||||| || Sbjct: 1257 aaaggaatattctcttgcttaagtatgtggaccaacttcccactgaacccacactttggt 1198 Query: 691 tcctc 695 ||||| Sbjct: 1197 tcctc 1193 Score = 172 bits (87), Expect = 1e-39 Identities = 204/243 (83%) Strand = Plus / Minus Query: 159 cttcagctctccactcttttccagctcgagaacaatgtcacagccccccatcagttctga 218 |||||||||||| ||||| |||| ||| ||||| || ||||| ||||| ||||| || || Sbjct: 1730 cttcagctctccgctcttctccatctcaagaacgatatcacatcccccaatcagctccga 1671 Query: 219 tttgtagtagagttgggggaaggtgggccagttcgagtatgtcttcagaccttgtctaac 278 |||||||||||| ||||||||||| |||||||| ||||| ||||||| |||||| ||||| Sbjct: 1670 tttgtagtagagctgggggaaggtaggccagttggagtacgtcttcaaaccttgcctaac 1611 Query: 279 ttcctcatcagatagaatgtcaaaggacccaaagcttatccctgctcctttcaaggcatt 338 |||||| ||||||| ||||| |||||||||||||| | |||| | |||||||| || Sbjct: 1610 ttcctcgtcagataagatgtcgaaggacccaaagctgaccccttccttcttcaaggcgtt 1551 Query: 339 caccactttcgaactaaagccacaacgtggattatctgggttgcccttcatgaacagcat 398 ||| || |||||||| ||||| || || ||| |||||| ||||||||||||| ||||| Sbjct: 1550 cacaaccttcgaactgaagccgcagcgaggagcatctggagtgcccttcatgaaaagcat 1491 Query: 399 cac 401 ||| Sbjct: 1490 cac 1488
>dbj|AK105626.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-C12, full insert sequence Length = 1441 Score = 202 bits (102), Expect = 1e-48 Identities = 147/162 (90%) Strand = Plus / Minus Query: 534 ttcacccttgatgtacacctgagggtaactaggccagtttgatagaacctttaggccctg 593 |||||| || ||||||| ||||||||||||||||||||||| |||| |||||| ||||| Sbjct: 1179 ttcaccgtttatgtacagttgagggtaactaggccagtttgagagaagctttagaccctg 1120 Query: 594 cctaacctcatcatctgtaagaatgtcaaaacttgagaaaggaatcttctcttgcttaag 653 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1119 cctaacctcatcatccgtaagaatgtcaaaacttgagaaagggatcttctcttgcttaag 1060 Query: 654 aatgtgaacgacctttccactgaatccgcacttgggctcctc 695 ||| || || | |||||||||||||| |||||||||||||| Sbjct: 1059 aatatgcactagttttccactgaatccacacttgggctcctc 1018 Score = 89.7 bits (45), Expect = 1e-14 Identities = 66/73 (90%) Strand = Plus / Minus Query: 143 actccgaaagagtggccttcagctctccactcttttccagctcgagaacaatgtcacagc 202 |||||||||| |||| |||||||||||||||||| |||||||| ||||| |||||||||| Sbjct: 1249 actccgaaagcgtggacttcagctctccactcttctccagctcaagaacgatgtcacagc 1190 Query: 203 cccccatcagttc 215 | || |||||||| Sbjct: 1189 ctccaatcagttc 1177
>emb|CR701886.2|CNS0G4IY Tetraodon nigroviridis full-length cDNA Length = 916 Score = 56.0 bits (28), Expect = 2e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 378 gttgcccttcatgaacagcatcactggg 405 |||||||||||||||||||||||||||| Sbjct: 531 gttgcccttcatgaacagcatcactggg 504 Score = 42.1 bits (21), Expect = 2.4 Identities = 45/53 (84%) Strand = Plus / Minus Query: 232 tgggggaaggtgggccagttcgagtatgtcttcagaccttgtctaacttcctc 284 |||||| ||||||||||||| ||||| ||||| || || |||| |||||||| Sbjct: 677 tgggggtaggtgggccagttggagtaggtcttgagcccctgtcggacttcctc 625
>emb|CR686559.2|CNS0FSP7 Tetraodon nigroviridis full-length cDNA Length = 940 Score = 56.0 bits (28), Expect = 2e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 378 gttgcccttcatgaacagcatcactggg 405 |||||||||||||||||||||||||||| Sbjct: 518 gttgcccttcatgaacagcatcactggg 491 Score = 42.1 bits (21), Expect = 2.4 Identities = 45/53 (84%) Strand = Plus / Minus Query: 232 tgggggaaggtgggccagttcgagtatgtcttcagaccttgtctaacttcctc 284 |||||| ||||||||||||| ||||| ||||| || || |||| |||||||| Sbjct: 664 tgggggtaggtgggccagttggagtaggtcttgagcccctgtcggacttcctc 612
>emb|CR685740.2|CNS0FS2G Tetraodon nigroviridis full-length cDNA Length = 1309 Score = 56.0 bits (28), Expect = 2e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 378 gttgcccttcatgaacagcatcactggg 405 |||||||||||||||||||||||||||| Sbjct: 739 gttgcccttcatgaacagcatcactggg 712 Score = 42.1 bits (21), Expect = 2.4 Identities = 45/53 (84%) Strand = Plus / Minus Query: 232 tgggggaaggtgggccagttcgagtatgtcttcagaccttgtctaacttcctc 284 |||||| ||||||||||||| ||||| ||||| || || |||| |||||||| Sbjct: 885 tgggggtaggtgggccagttggagtaggtcttgagcccctgtcggacttcctc 833
>emb|CR640557.2|CNS0ET83 Tetraodon nigroviridis full-length cDNA Length = 1156 Score = 56.0 bits (28), Expect = 2e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 378 gttgcccttcatgaacagcatcactggg 405 |||||||||||||||||||||||||||| Sbjct: 748 gttgcccttcatgaacagcatcactggg 721 Score = 42.1 bits (21), Expect = 2.4 Identities = 45/53 (84%) Strand = Plus / Minus Query: 232 tgggggaaggtgggccagttcgagtatgtcttcagaccttgtctaacttcctc 284 |||||| ||||||||||||| ||||| ||||| || || |||| |||||||| Sbjct: 894 tgggggtaggtgggccagttggagtaggtcttgagcccctgtcggacttcctc 842
>ref|XM_568962.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNB04720) partial mRNA Length = 459 Score = 48.1 bits (24), Expect = 0.039 Identities = 33/36 (91%) Strand = Plus / Minus Query: 523 ccaccaaccaattcacccttgatgtacacctgaggg 558 ||||| || ||||||||||||||||| ||||||||| Sbjct: 353 ccaccgacgaattcacccttgatgtaaacctgaggg 318
>gb|AE017342.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 2, complete sequence Length = 1632307 Score = 48.1 bits (24), Expect = 0.039 Identities = 33/36 (91%) Strand = Plus / Minus Query: 523 ccaccaaccaattcacccttgatgtacacctgaggg 558 ||||| || ||||||||||||||||| ||||||||| Sbjct: 1347601 ccaccgacgaattcacccttgatgtaaacctgaggg 1347566
>gb|AE016817.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome IV, complete sequence Length = 1466886 Score = 48.1 bits (24), Expect = 0.039 Identities = 39/44 (88%) Strand = Plus / Minus Query: 373 tctgggttgcccttcatgaacagcatcactggggatgaggaaat 416 |||||| |||||||||||||||| | |||||||| |||||||| Sbjct: 804882 tctggggtgcccttcatgaacagaaccactggggcagaggaaat 804839
>ref|NM_209502.1| Eremothecium gossypii ADR053Wp (ADR053W), mRNA Length = 417 Score = 48.1 bits (24), Expect = 0.039 Identities = 39/44 (88%) Strand = Plus / Minus Query: 373 tctgggttgcccttcatgaacagcatcactggggatgaggaaat 416 |||||| |||||||||||||||| | |||||||| |||||||| Sbjct: 149 tctggggtgcccttcatgaacagaaccactggggcagaggaaat 106
>ref|XM_446717.1| Candida glabrata CBS138, CAGL0G08151g partial mRNA Length = 783 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 375 tgggttgcccttcatgaacagcatcac 401 |||||| |||||||||||||||||||| Sbjct: 537 tgggttacccttcatgaacagcatcac 511
>gb|AC079443.48| Mus musculus strain C57BL/6J clone rp23-381f7 map 6, complete sequence Length = 207091 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 227 agagttgggggaaggtgggccag 249 ||||||||||||||||||||||| Sbjct: 149388 agagttgggggaaggtgggccag 149366
>emb|CR696635.2|CNS0G0H3 Tetraodon nigroviridis full-length cDNA Length = 1142 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 378 gttgcccttcatgaacagcatca 400 ||||||||||||||||||||||| Sbjct: 723 gttgcccttcatgaacagcatca 701 Score = 42.1 bits (21), Expect = 2.4 Identities = 45/53 (84%) Strand = Plus / Minus Query: 232 tgggggaaggtgggccagttcgagtatgtcttcagaccttgtctaacttcctc 284 |||||| ||||||||||||| ||||| ||||| || || |||| |||||||| Sbjct: 869 tgggggtaggtgggccagttggagtaggtcttgagcccctgtcggacttcctc 817
>emb|CR682243.2|CNS0FPDB Tetraodon nigroviridis full-length cDNA Length = 1139 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 378 gttgcccttcatgaacagcatca 400 ||||||||||||||||||||||| Sbjct: 721 gttgcccttcatgaacagcatca 699 Score = 42.1 bits (21), Expect = 2.4 Identities = 45/53 (84%) Strand = Plus / Minus Query: 232 tgggggaaggtgggccagttcgagtatgtcttcagaccttgtctaacttcctc 284 |||||| ||||||||||||| ||||| ||||| || || |||| |||||||| Sbjct: 867 tgggggtaggtgggccagttggagtaggtcttgagcccctgtcggacttcctc 815
>emb|CR380953.1| Candida glabrata strain CBS138 chromosome G complete sequence Length = 992211 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 375 tgggttgcccttcatgaacagcatcac 401 |||||| |||||||||||||||||||| Sbjct: 775299 tgggttacccttcatgaacagcatcac 775325
>gb|AC153584.5| Mus musculus 6 BAC RP23-27C9 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 208921 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 227 agagttgggggaaggtgggccag 249 ||||||||||||||||||||||| Sbjct: 189499 agagttgggggaaggtgggccag 189521
>gb|AC102612.14| Mus musculus chromosome 9, clone RP23-417D20, complete sequence Length = 202804 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 220 ttgtagtagagttgggggaagg 241 |||||||||||||||||||||| Sbjct: 138663 ttgtagtagagttgggggaagg 138642
>gb|DQ019483.1| Lilium longiflorum clone LP42 unknown mRNA Length = 532 Score = 44.1 bits (22), Expect = 0.61 Identities = 31/34 (91%) Strand = Plus / Minus Query: 225 gtagagttgggggaaggtgggccagttcgagtat 258 |||||| |||||||||||||||||| | |||||| Sbjct: 160 gtagagctgggggaaggtgggccagctggagtat 127
>gb|AC174927.2| Mus musculus BAC clone RP24-325L16 from chromosome 9, complete sequence Length = 195951 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 220 ttgtagtagagttgggggaagg 241 |||||||||||||||||||||| Sbjct: 147628 ttgtagtagagttgggggaagg 147649
>ref|XM_759667.1| Theileria parva strain Muguga hypothetical protein (TP02_0196) partial mRNA Length = 534 Score = 42.1 bits (21), Expect = 2.4 Identities = 36/41 (87%) Strand = Plus / Minus Query: 226 tagagttgggggaaggtgggccagttcgagtatgtcttcag 266 ||||||||||| | || ||||||||||||||||| ||||| Sbjct: 437 tagagttggggatatgtaggccagttcgagtatgttttcag 397
>dbj|AK049512.1| Mus musculus 7 days embryo whole body cDNA, RIKEN full-length enriched library, clone:C430018J02 product:unclassifiable, full insert sequence Length = 2357 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 398 tcactggggatgaggaaatta 418 ||||||||||||||||||||| Sbjct: 237 tcactggggatgaggaaatta 257
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 225 gtagagttgggggaaggtgggccagttcg 253 |||||| ||||||||||| |||||||||| Sbjct: 2571719 gtagagctgggggaaggtcggccagttcg 2571691
>emb|BX571789.4| Mouse DNA sequence from clone RP23-283M22 on chromosome X, complete sequence Length = 31235 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 213 ttctgatttgtagtagagttggggg 237 ||||||||||||||| ||||||||| Sbjct: 7618 ttctgatttgtagtaaagttggggg 7594
>emb|AL773561.7| Mouse DNA sequence from clone RP23-71D9 on chromosome X, complete sequence Length = 174072 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 398 tcactggggatgaggaaatta 418 ||||||||||||||||||||| Sbjct: 126688 tcactggggatgaggaaatta 126708
>ref|NM_116733.2| Arabidopsis thaliana electron transporter AT4G04950 mRNA, complete cds Length = 1708 Score = 40.1 bits (20), Expect = 9.5 Identities = 44/52 (84%) Strand = Plus / Minus Query: 457 atccctttctcagtcagaaccttcttcagttccccactcttatgcatctcca 508 ||||||||||| |||| ||||| ||||| || || ||||| |||||||||| Sbjct: 1176 atccctttctcggtcaagacctttttcagctcaccgctcttttgcatctcca 1125
>gb|AC137922.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0046A04, complete sequence Length = 141001 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 554 gagggtaactaggccagttt 573 |||||||||||||||||||| Sbjct: 13125 gagggtaactaggccagttt 13144
>gb|AC135558.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007C02, complete sequence Length = 148265 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 554 gagggtaactaggccagttt 573 |||||||||||||||||||| Sbjct: 83491 gagggtaactaggccagttt 83472
>ref|XM_717449.1| Candida albicans SC5314 hypothetical protein (CaO19_1494), mRNA Length = 1047 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 ataacaatgccatcaataga 74 |||||||||||||||||||| Sbjct: 926 ataacaatgccatcaataga 945
>ref|XM_717312.1| Candida albicans SC5314 hypothetical protein (CaO19_9071), mRNA Length = 1047 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 ataacaatgccatcaataga 74 |||||||||||||||||||| Sbjct: 926 ataacaatgccatcaataga 945
>gb|DP000012.1| Macropus eugenii target 1 genomic scaffold Length = 1996640 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 cttcctcatcagatagaatg 297 |||||||||||||||||||| Sbjct: 136077 cttcctcatcagatagaatg 136096
>gb|AC144402.2| Atelerix albiventris clone LBNL4-89B6, complete sequence Length = 161430 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 gagtatgtcttcagaccttg 272 |||||||||||||||||||| Sbjct: 115332 gagtatgtcttcagaccttg 115313
>emb|AL603789.3| Human DNA sequence from clone RP11-415G4 on chromosome 13, complete sequence Length = 129361 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 tggatctatgaaatacattg 52 |||||||||||||||||||| Sbjct: 6614 tggatctatgaaatacattg 6633
>emb|AL157829.24| Human DNA sequence from clone RP11-305F14 on chromosome 9 Contains part of the ASTN2 gene for astrotactin2 (KIAA0634), and a CpG island, complete sequence Length = 162575 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 493 ctcttatgcatctccatcac 512 |||||||||||||||||||| Sbjct: 154254 ctcttatgcatctccatcac 154235
>emb|AL138791.14| Human DNA sequence from clone RP4-725K1 on chromosome 1 Contains the 5' end of a variant of the PDE4DIP gene for phosphodiesterase 4D interacting protein (myomegalin), complete sequence Length = 35836 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 530 ccaattcacccttgatgtacacct 553 |||||||||||||||||| ||||| Sbjct: 28676 ccaattcacccttgatgtgcacct 28699
>emb|AL161554.2|ATCHRIV54 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 54 Length = 198715 Score = 40.1 bits (20), Expect = 9.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 463 ttctcagtcagaaccttcttcagttccc 490 ||||||| ||||||||||||||| |||| Sbjct: 152173 ttctcagccagaaccttcttcaggtccc 152200
>emb|AL161502.2|ATCHRIV14 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 14 Length = 198563 Score = 40.1 bits (20), Expect = 9.5 Identities = 44/52 (84%) Strand = Plus / Plus Query: 457 atccctttctcagtcagaaccttcttcagttccccactcttatgcatctcca 508 ||||||||||| |||| ||||| ||||| || || ||||| |||||||||| Sbjct: 50213 atccctttctcggtcaagacctttttcagctcaccgctcttttgcatctcca 50264
>emb|AL031187.1|ATT6K22 Arabidopsis thaliana DNA chromosome 4, BAC clone T6K22 (ESSAII project) Length = 89219 Score = 40.1 bits (20), Expect = 9.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 463 ttctcagtcagaaccttcttcagttccc 490 ||||||| ||||||||||||||| |||| Sbjct: 8896 ttctcagccagaaccttcttcaggtccc 8923
>gb|AY142003.1| Arabidopsis thaliana At4g04950/T1J1_6 mRNA, complete cds Length = 1467 Score = 40.1 bits (20), Expect = 9.5 Identities = 44/52 (84%) Strand = Plus / Minus Query: 457 atccctttctcagtcagaaccttcttcagttccccactcttatgcatctcca 508 ||||||||||| |||| ||||| ||||| || || ||||| |||||||||| Sbjct: 1151 atccctttctcggtcaagacctttttcagctcaccgctcttttgcatctcca 1100
>gb|AC104989.11| Homo sapiens chromosome 8, clone RP11-769N21, complete sequence Length = 181644 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 318 ccctgctcctttcaaggcat 337 |||||||||||||||||||| Sbjct: 34 ccctgctcctttcaaggcat 15
>gb|AC183687.3| Pan troglodytes BAC clone CH251-25N14 from chromosome 1, complete sequence Length = 192054 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 530 ccaattcacccttgatgtacacct 553 |||||||||||||||||| ||||| Sbjct: 121342 ccaattcacccttgatgtgcacct 121365
>gb|AC021236.10| Homo sapiens chromosome 8, clone RP11-113H14, complete sequence Length = 162259 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 ccctgctcctttcaaggcat 337 |||||||||||||||||||| Sbjct: 32334 ccctgctcctttcaaggcat 32353
>gb|AY058202.1| Arabidopsis thaliana AT4g04950/T1J1_6 mRNA, complete cds Length = 1648 Score = 40.1 bits (20), Expect = 9.5 Identities = 44/52 (84%) Strand = Plus / Minus Query: 457 atccctttctcagtcagaaccttcttcagttccccactcttatgcatctcca 508 ||||||||||| |||| ||||| ||||| || || ||||| |||||||||| Sbjct: 1176 atccctttctcggtcaagacctttttcagctcaccgctcttttgcatctcca 1125
>gb|AC008004.5|AC008004 Drosophila melanogaster, chromosome 2R, region 54B-54C, BAC clone BACR21A09, complete sequence Length = 175506 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 76 caattcgatataggacagatgctc 99 ||||||||||||| |||||||||| Sbjct: 89263 caattcgatatagaacagatgctc 89240
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 554 gagggtaactaggccagttt 573 |||||||||||||||||||| Sbjct: 11811395 gagggtaactaggccagttt 11811414
>gb|DQ003720.1| Homo sapiens ubiquitin-conjugating enzyme E2 variant 2 (UBE2V2) gene, complete cds Length = 55965 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 318 ccctgctcctttcaaggcat 337 |||||||||||||||||||| Sbjct: 25185 ccctgctcctttcaaggcat 25166
>gb|AC023668.5| Homo sapiens BAC clone RP11-255I17 from 2, complete sequence Length = 156410 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 627 tgagaaaggaatcttctctt 646 |||||||||||||||||||| Sbjct: 72 tgagaaaggaatcttctctt 91
>gb|AC092571.2| Homo sapiens BAC clone CTD-2200N21 from 2, complete sequence Length = 2419 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 627 tgagaaaggaatcttctctt 646 |||||||||||||||||||| Sbjct: 491 tgagaaaggaatcttctctt 510
>gb|AC007422.7|AC007422 Homo sapiens chromosome , clone RP11-68A1, complete sequence Length = 156485 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 627 tgagaaaggaatcttctctt 646 |||||||||||||||||||| Sbjct: 1510 tgagaaaggaatcttctctt 1491
>gb|AC145409.3| Macropus eugenii clone ME_KBa-528O13, complete sequence Length = 140426 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 cttcctcatcagatagaatg 297 |||||||||||||||||||| Sbjct: 136077 cttcctcatcagatagaatg 136096
>gb|AC145407.3| Macropus eugenii clone ME_KBa-169G7, complete sequence Length = 129708 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 cttcctcatcagatagaatg 297 |||||||||||||||||||| Sbjct: 1772 cttcctcatcagatagaatg 1791
>gb|AF128393.1|T1J1 Arabidopsis thaliana BAC T1J1 Length = 53778 Score = 40.1 bits (20), Expect = 9.5 Identities = 44/52 (84%) Strand = Plus / Plus Query: 457 atccctttctcagtcagaaccttcttcagttccccactcttatgcatctcca 508 ||||||||||| |||| ||||| ||||| || || ||||| |||||||||| Sbjct: 42266 atccctttctcggtcaagacctttttcagctcaccgctcttttgcatctcca 42317
>gb|AE003803.4| Drosophila melanogaster chromosome 2R, section 47 of 73 of the complete sequence Length = 290783 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 76 caattcgatataggacagatgctc 99 ||||||||||||| |||||||||| Sbjct: 232280 caattcgatatagaacagatgctc 232257
>gb|L77117.1| Methanocaldococcus jannaschii DSM 2661, complete genome Length = 1664970 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 taacttcctcatcagataga 294 |||||||||||||||||||| Sbjct: 1663554 taacttcctcatcagataga 1663573
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 554 gagggtaactaggccagttt 573 |||||||||||||||||||| Sbjct: 11889805 gagggtaactaggccagttt 11889824 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,662,635 Number of Sequences: 3902068 Number of extensions: 5662635 Number of successful extensions: 116913 Number of sequences better than 10.0: 61 Number of HSP's better than 10.0 without gapping: 61 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 116635 Number of HSP's gapped (non-prelim): 270 length of query: 696 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 673 effective length of database: 17,143,297,704 effective search space: 11537439354792 effective search space used: 11537439354792 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)